CN102634467A - Iron reducing bacteria and application thereof - Google Patents

Iron reducing bacteria and application thereof Download PDF

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CN102634467A
CN102634467A CN2012100607299A CN201210060729A CN102634467A CN 102634467 A CN102634467 A CN 102634467A CN 2012100607299 A CN2012100607299 A CN 2012100607299A CN 201210060729 A CN201210060729 A CN 201210060729A CN 102634467 A CN102634467 A CN 102634467A
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bacterial strain
sgz
soil
iron
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CN102634467B (en
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周顺桂
杨贵芹
袁勇
陈铭
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Institute of Eco Environmental and Soil Sciences of Guangdong Academy of Sciens
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Guangdong Institute of Eco Environment and Soil Sciences
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Abstract

The invention discloses a Fontibacterferrireducenss p. nov. CCTCCM 2011498 and the application of the Fontibacterferrireducenss p. nov. CCTCCM 2011498 in iron reduction. The SgZ-2 has stronger anaerobic iron reduction capacity and potential application value in the aspect of environmental modification.

Description

One strain iron-reducing bacterium and application
Technical field
The present invention relates to a strain novel bacterial and the application in environmental engineering thereof, be specifically related to strain iron reduction FontibacterferrireducensSp. nov. bacterium novel species, and the application in the iron reduction.
Background technology
A large amount of uses of oil, agricultural chemicals and the objectionable impurities in the municipal wastes are infiltrated soil in a large number, and the organic contamination of soil has become huge environmental problem.China has a large population, and land resources is limited, and along with the progress of urbanization, the soil organic pollution problems is particularly outstanding.
The reparation of soil pollution has two kinds, and a kind of is the dystopy reparation, is about to contaminated soil and is transferred to elsewhere landfill or processing, avoids its harm humans safety.This method can be destroyed the structure of soil inevitably, and is difficult to the reparation of deep layer contaminated soil, and running cost is high, is abandoned gradually.Another kind is the original position reparation, is a kind of biologic treating technique at source of pollution on-the-spot disposal pollutent.The nineties in 20th century; The U.S. spends the more than one hundred billion dollar to encourage emerging original position soil recovery technique in the period of 10; Wherein gaseous phase of soil extracts (soil vapor extraction), biological ventilate (bio-venting) and air spray (air sparging) because of its efficient is high, cost is low; Flexible design and characteristics such as simple to operate and developed rapidly are to use the widest original position soil restorative procedure.But this venting method still can't effectively be repaired the contaminated soil that is difficult to ventilate, like deep soil and water logging soil.
Iron average content in the earth's crust is about 5.6%, and mainly the form with ferric oxide exists.In anaerobism soil, in water logging soil and deep soil, ferric iron is the highest electron acceptor(EA) of abundance.Soil ulmin is to be rich in natural organic mixture quinonyl, heterogeneous, is the main body of the soil organism, accounts for 60~80% of soil organic carbon.According to statistics, in some flooded soils and freshwater sediment, the Fe of mikrobe (III) breathes (reduction)/humus respiration and has directly caused the organic carbon degraded more than 80%, far above the summation of other anaerobic respirations.Therefore, under the anaerobic condition, can utilize soil ulmin and ferric iron as electron acceptor(EA) simultaneously, can more effectively realize the original position soil reparation better with the organic pollutant mineralising like mikrobe.
FontibacterBelong to the sphingolipid Bacteriaceae ( Cyclobacteriaceae), set up in 2010 by people such as Kampfer at first.Its paper ( Fontibacter flavusGen. nov., sp. nov., a member of the family ' Cyclobacteriaceae', isolated from a hot spring, Peter K mpfer Et al. IJSEM September 2010 vol. 60 no. 9 2066-2070 ) when delivering, this subordinate only has a kind Fontibacter flavusSo far, find to have the iron reducing power FontibacterBacterial strain.
Summary of the invention
The object of the present invention is to provide a strain to have the novel bacterial of iron reducing power: FontibacterferrireducensSp. nov. SgZ-2.
Another object of the present invention is to provide the application of above-mentioned bacterial strains in the soil original position is repaired.
The applicant submitted bacterial strain to be positioned at Hubei Wuhan University Chinese typical culture collection center preservation on October 28th, 2011, and the bacterial strain that the applicant provides is received at Chinese typical culture collection center on December 31st, 2011 FontibacterferrireducensSp. nov. SgZ-2, the preserving number that the preservation center gives this culture does CCTCC M2011498, the classification called after of suggestion FontibacterferrireducensSgZ-2 is survived in the bacterial strain of evaluation preservation on January 10th, 2012.
Bacterial strain of the present invention FontibacterferrireducensSp. nov. SgZ-2; Soil ulmin under anaerobic capable of using and ferric iron are electron acceptor(EA), quicken organic degraded, and therefore original position is removed the organic pollutant in the soil effectively; Realize the original position reparation of soil cheaply; Can not destroy simultaneously the structure of soil, help the utilization of land resources, aspect environment remediation, be with a wide range of applications.
Description of drawings:
Fig. 1: 5000 * transmission electron microscope photo of bacterial strain of the present invention;
Fig. 2: 3000 * transmission electron microscope photo of bacterial strain of the present invention;
Fig. 3: the 16S rRNA Phylogenetic Tree of bacterial strain of the present invention;
Fig. 4-7: bacterial strain of the present invention uses different electron donors to reduce the experimental result picture of different Fe (III).
Embodiment
The enrichment of bacterial strain SgZ-2 with separate
From 3 months sludge microbe fuel cell of continuous service, tear and get the anode microbial film and be soaked in the mineral salts medium of 20 mL sterilization, the composition of mineral salts medium (MSM) is: 0.6 g NaH 2PO 4, 0.25 g NH 4Cl, 0.1 g KCl, 0.2 g yeast extract, 10.0ml vitamin solution, 10.0ml trace element solution; And the glucose of AQDS and 5 mM that is added with 0.5 mM is respectively as electron acceptor(EA) and electron donor; PH regulator to 7.2; Wherein, vitamin solution is to contain 2.0 mg vitamin Hs, 2.0 mg folic acid, VB in every liter of deionized water 610.0 mg VITAMINs, 5.0 mg VitB1s, 5.0 mg vitamin G, 5.0 mg nicotinic acid, 5.0 mg VAs, 0.1 mg vitamins B 12, 5.0 mg para-amino benzoic acid, 5.0 mg Thioctic Acids; Trace element solution is to contain 1.5 g nitrilotriacetic acid(NTA)s, 3.0 g MgSO in every liter of deionized water 47H 2O, 0.5 g MnSO 4H 2O, 1.0 g NaCl, 0.1 g FeSO 47H 2O, 0.1 g CoCl 26H 2O, 0.1 g CaCl 2, 0.1 g ZnSO 47H 2O, 0.01 g CuSO 45H 2O, 0.01 g AlK (SO 4) 212H 2O, 0.01 g H 3BO 3, 0.01 g Na 2MoO 42H 2O;
In vaccinated enrichment medium, fill gas mixture (N 2/ CO 2=80/20) 15 minutes, air-blowing finished and covers serum cap and add aluminium lid sealing, places the anaerobism workstation, and 30 ℃ leave standstill cultivation, observe the colour-change situation of nutrient solution;
Behind the 5d, the nutrient solution color becomes when orange-yellow from colourless, nutrient solution is applied on the MSM agar (20g agar, 1 mM AQDS and 5 mM glucose) 30 ℃ of anaerobism workstation anaerobism (N 2/ CO 2=80/20) cultivates;
Screening take on a red color on the flat board for can carry out AQDS reductive bacterium colony, use TSA or TSB substratum separate, and obtain bacterial strain SgZ-2.
The morphological specificity of bacterial strain SgZ-2
1) thalli morphology characteristic
Bacterial strain SgZ-2 is a Gram-negative bacteria, does not produce gemma; Transmission electron microscope result (Fig. 1 and 2) shows the bacterial strain atrichia, and bar-shaped, wide about 0.2-0.4 μ m is about 1.5-3.0 μ m.
) the colonial morphology characteristic
Bacterium colony is orange, convexity, and the edge is rounded, the about 2-4 mm of diameter.
The physiological and biochemical property of bacterial strain SgZ-2
According to the physiological and biochemical property of " uncle outstanding Bacteria Identification identification handbook " the 9th edition described standard program test strain, and utilize API ID32GN, 20E, ZYM experiment bar detect other physico-chemical property and with Fontibacter flavusCCM 7650 T Compare, bacterial strain SgZ-2 is non-fermented type facultative anaerobe, and the result sees the following form:
Figure 2012100607299100002DEST_PATH_RE-DEST_PATH_IMAGE002
The optimum N aCl content of bacterial strain SgZ-2 growth is 1%, and growth temperature is 15~37 ℃ (optimum growth temp is 25~30 ℃), optimum growh pH 7.0.Well-grown on nutrient agar medium is not grown on MacConkey agar.
Bacterial strain SgZ-2 glucose capable of using, melibiose, sucrose, trehalose fermentation and acid, but N.F,USP MANNITOL, inositol, rhamnosyl, amygdaloside and pectinose fermentation and acid can not be utilized; Can utilize glucose, saligenin, melibiose, trehalose, sorbyl alcohol, sucrose and SANMALT-S as single carbon source, cannot utilize N.F,USP MANNITOL, pectinose, propionic acid, capric acid, valeric acid, Hydrocerol A (salt), Histidine, 2-ketone gluconate, 3-hydroxybutyric acid, Whitfield's ointment, proline(Pro), rhamnosyl, N-acetylglucosamine, ribose, inositol, methylene-succinic acid, suberic acid, acetate, lactic acid salt, L-Ala, 5-ketone group-gluconate, Whitfield's ointment, glycogen or Serine as single carbon source.
The chemotaxonomy characteristic of bacterial strain SgZ-2
For confirming the classification position of invention bacterial strain, measured the fatty acid content of bacterial strain SgZ-2 cell, and with Fontibacter flavusCCM 7650 T Compare, the result is as shown in table 2.
*Summed feature 3 comprises C 16:1 ω6 cAnd/or C 16:1 ω7 c; Summed feature 8 comprises one or more of 17:1 iso I/anteiso B, three kinds of components of 17:1 anteiso B/iso I; Summed feature 9 comprises 17:1 iso ω9c and/or 16:0 10-methyl.
The molecular classification status of bacterial strain SgZ-2
Extract total DNA of invention bacterial strain; DNA to extract is a template, and the 16S rRNA gene of amplification bacterium obtains the 16S rRNA sequence of almost complete (1429bp), checks order after pcr amplification product is reclaimed purifying, and the gene accession number of institute's calling sequence in GenBank is JQ348962.
Online comparison instrument through EzTaxon server 2.1 websites is compared, and 16S rRNA gene sequencing result shows, bacterial strain SgZ-2 with FontibacterUnique member in the genus Fontibacter flavusThe 16S rRNA gene order similarity of CCM7650 is the highest, is 99.4%, and in belonging to other similaritys of bacterial strain all less than 94%.
The phylogenetic tree that uses the Neighbor-joining method to make up is as shown in Figure 3.In the phylogenetic tree that the Neighbor-joining method makes up, bacterial strain SgZ-2 with Fontibacter flavusCCM 7650 TBe in different inferior branches.
For further confirm SgZ-2 with Fontibacter flavusCCM 7650 TBetween taxonomic relation, press Ezaki Et al. the method that (1989) are described is carried out DNA-DNA hybridization to it.The result show bacterial strain SgZ-2 with Fontibacter flavusCCM 7650 TDNA-DNA dependency very low (quadrature 35.7%, reciprocal cross 40%), far below standard of perfection of the same race 70%, show that bacterial strain SgZ-2 is a new bacterial classification.
Comprehensive above-mentioned morphological feature, physio-biochemical characteristics and Phylogenetic Analysis, bacterial strain of the present invention due to FontibacterBelong to, and be defined as novel species, with its called after Fontibacter ferrireducensSp. nov..
Bacterial strain SgZ-2 under different electron donors to the reductive action of different Fe (III)
1) adopts the liquid culture based formulas: 0.25g NH in every liter of deionized water 4Cl, 0.678g NaH 2PO 42H 2O, 0.1g KCl, 2.94g NaHCO 3, 1.59g Na 2CO 3, each 10.0 mL (vitamin solution and the same isolation medium of trace element solution composition) of vitamin solution and trace element solution; After the sterilization, the glucose that adds 10 mM in the system is as electron donor, and the four kinds of ferriferous oxides (ferrihydrite, pyrrhosiderite, lepidocrokile and rhombohedral iron ore) that add 25 mM respectively are as electron acceptor(EA);
2) be seeded to the TSB substratum from the inclined-plane picking lawn of preserving bacterial strain SgZ-1, in 30 ℃, 180 rpm shaking table activation thalline 18 hours make bacterial number reach exponential phase of growth;
3) 4 ℃, centrifugal 10 min of 6000 rpm remove supernatant, and carbonic acid buffer suspends again, repeat aforesaid operations 2 times, and the concentration of final suspension-s reaches OD 600About 1.2;
4) add 1 ml thallus suspension liquid as processing, use substratum that does not add bacterial strain SgZ-2 and the substratum that adds bacterial strain SgZ-2 but do not add glucose are set simultaneously as contrast respectively, the same terms is cultivated down;
5) every got at a distance from 5 days the 4 ml nutrient solutions that mix in 16ml 0.5mol/l HCl solution 180 rev/mins vibrated 1.5 hours; Refilter; Adopt adjacent phenanthroline method to give the Fe (II) in the filtrating colour developing; Adopt ultraviolet spectrophotometer to measure the content of Fe (II) at 510 nm places, and be contrast, verify the iron reducing power of bacterial strain with the nutrient solution that does not add bacterium.
Test-results is shown in Fig. 4~7, and bacterial strain SgZ-2 can utilize glucose to be the electron donor reducing iron oxides, and is wherein the highest to the reduction efficiency of ferrihydrite, is lepidocrokile, pyrrhosiderite and rhombohedral iron ore successively secondly.

Claims (2)

1. iron-reducing bacterium FontibacterferrireducensSp. nov. SgZ-2 is deposited in Chinese typical culture collection center, and its preserving number does CCTCC M2011498
2. the said iron reduction of claim 1 FontibacterferrireducensSp. the application of nov. bacterium SgZ-2 in the soil original position is repaired.
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Cited By (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN103752604A (en) * 2014-01-21 2014-04-30 广东省生态环境与土壤研究所 Method for repairing heavy metal contaminated soil by combination of biochar and iron-reducing bacteria agent
CN104458734A (en) * 2014-12-19 2015-03-25 中国环境科学研究院 Method for determining reduction potential of compost and mineralized refuse
CN105670965A (en) * 2016-02-25 2016-06-15 广东省生态环境与土壤研究所 Novel strain with iron reduction capability and application thereof
CN108821444A (en) * 2018-05-28 2018-11-16 天津大学 Anaerobism phosphorus recovery method based on microorganism alienation metal reduction

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Cited By (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN103752604A (en) * 2014-01-21 2014-04-30 广东省生态环境与土壤研究所 Method for repairing heavy metal contaminated soil by combination of biochar and iron-reducing bacteria agent
CN103752604B (en) * 2014-01-21 2015-12-02 广东省生态环境与土壤研究所 A kind of method of charcoal and Fe3+ reduction microbial inoculum renovation of heavy metal polluted soil with combined
CN104458734A (en) * 2014-12-19 2015-03-25 中国环境科学研究院 Method for determining reduction potential of compost and mineralized refuse
CN104458734B (en) * 2014-12-19 2017-01-25 中国环境科学研究院 Method for determining reduction potential of compost and mineralized refuse
CN105670965A (en) * 2016-02-25 2016-06-15 广东省生态环境与土壤研究所 Novel strain with iron reduction capability and application thereof
CN105670965B (en) * 2016-02-25 2020-02-21 广东省生态环境技术研究所 Strain with iron reduction capacity and application thereof
CN108821444A (en) * 2018-05-28 2018-11-16 天津大学 Anaerobism phosphorus recovery method based on microorganism alienation metal reduction

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