CA3024355A1 - Methods for identification of samples - Google Patents

Methods for identification of samples Download PDF

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Publication number
CA3024355A1
CA3024355A1 CA3024355A CA3024355A CA3024355A1 CA 3024355 A1 CA3024355 A1 CA 3024355A1 CA 3024355 A CA3024355 A CA 3024355A CA 3024355 A CA3024355 A CA 3024355A CA 3024355 A1 CA3024355 A1 CA 3024355A1
Authority
CA
Canada
Prior art keywords
sequences
barcode
nucleotide
sequence
nucleotide barcode
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Pending
Application number
CA3024355A
Other languages
English (en)
French (fr)
Inventor
Harry Cuppens
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Dname-It Nv
Original Assignee
Dname-It Nv
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from EP16169997.0A external-priority patent/EP3246412A1/en
Priority claimed from GBGB1701908.4A external-priority patent/GB201701908D0/en
Application filed by Dname-It Nv filed Critical Dname-It Nv
Publication of CA3024355A1 publication Critical patent/CA3024355A1/en
Pending legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L3/00—Containers or dishes for laboratory use, e.g. laboratory glassware; Droppers
    • B01L3/54—Labware with identification means
    • B01L3/545—Labware with identification means for laboratory containers
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2300/00—Additional constructional details
    • B01L2300/02—Identification, exchange or storage of information
    • B01L2300/021—Identification, e.g. bar codes
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2525/00—Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
    • C12Q2525/10—Modifications characterised by
    • C12Q2525/179—Modifications characterised by incorporating arbitrary or random nucleotide sequences
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2535/00—Reactions characterised by the assay type for determining the identity of a nucleotide base or a sequence of oligonucleotides
    • C12Q2535/122—Massive parallel sequencing
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2545/00—Reactions characterised by their quantitative nature
    • C12Q2545/10—Reactions characterised by their quantitative nature the purpose being quantitative analysis
    • C12Q2545/101—Reactions characterised by their quantitative nature the purpose being quantitative analysis with an internal standard/control
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2563/00—Nucleic acid detection characterized by the use of physical, structural and functional properties
    • C12Q2563/179—Nucleic acid detection characterized by the use of physical, structural and functional properties the label being a nucleic acid
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2563/00—Nucleic acid detection characterized by the use of physical, structural and functional properties
    • C12Q2563/185—Nucleic acid dedicated to use as a hidden marker/bar code, e.g. inclusion of nucleic acids to mark art objects or animals

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Engineering & Computer Science (AREA)
  • Analytical Chemistry (AREA)
  • Molecular Biology (AREA)
  • Microbiology (AREA)
  • General Health & Medical Sciences (AREA)
  • Biotechnology (AREA)
  • Genetics & Genomics (AREA)
  • Immunology (AREA)
  • General Engineering & Computer Science (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biochemistry (AREA)
  • Physics & Mathematics (AREA)
  • Biophysics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Clinical Laboratory Science (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
CA3024355A 2016-05-17 2017-05-17 Methods for identification of samples Pending CA3024355A1 (en)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
EP16169997.0A EP3246412A1 (en) 2016-05-17 2016-05-17 Methods for identification of samples
EP16169997.0 2016-05-17
GB1701908.4 2017-02-06
GBGB1701908.4A GB201701908D0 (en) 2017-02-06 2017-02-06 Methods for identification of samples
PCT/EP2017/061902 WO2017198742A1 (en) 2016-05-17 2017-05-17 Methods for identification of samples

Publications (1)

Publication Number Publication Date
CA3024355A1 true CA3024355A1 (en) 2017-11-23

Family

ID=58992806

Family Applications (1)

Application Number Title Priority Date Filing Date
CA3024355A Pending CA3024355A1 (en) 2016-05-17 2017-05-17 Methods for identification of samples

Country Status (9)

Country Link
US (1) US12297495B2 (https=)
EP (1) EP3458606B1 (https=)
JP (1) JP7071341B2 (https=)
KR (2) KR20190037203A (https=)
CN (1) CN109477141B (https=)
AU (2) AU2017266299A1 (https=)
CA (1) CA3024355A1 (https=)
ES (1) ES3030501T3 (https=)
WO (1) WO2017198742A1 (https=)

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* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
IT201600103909A1 (it) * 2016-10-17 2018-04-17 Marco Flavio Michele Vismara Sistema e metodo di acquisizione, trasmissione ed elaborazione di dati ematochimici
WO2019226648A1 (en) 2018-05-21 2019-11-28 Battelle Memorial Institute Methods and control compositions for sequencing and chemical analyses
WO2020124003A1 (en) * 2018-12-13 2020-06-18 Battelle Memorial Institute Methods and control compositions for a quantitative polymerase chain reaction
CN116075596A (zh) * 2020-08-07 2023-05-05 牛津纳米孔科技公开有限公司 鉴定核酸条形码的方法
JP2023548653A (ja) * 2020-10-06 2023-11-20 ニュークレオトレース・ピーティワイ・リミテッド デジタルデータを表すオリゴヌクレオチド
KR20230096918A (ko) * 2020-11-06 2023-06-30 일루미나, 인코포레이티드 올리고뉴클레오타이드를 사용한 혼합물 내 물질 검출
KR102924534B1 (ko) * 2021-02-26 2026-02-06 지니너스 주식회사 분자 바코딩 효율을 향상시키기 위한 조성물 및 이의 용도
WO2022192603A1 (en) * 2021-03-10 2022-09-15 Factorial Diagnostics, Inc. Cell barcoding compositions and methods
GB202108684D0 (en) * 2021-06-17 2021-08-04 Salmotrace As Method of tagging fish and other animals
USD1116151S1 (en) 2023-05-03 2026-03-03 Truvian Sciences, Inc. Monolayer
DE102023205182A1 (de) * 2023-06-02 2024-12-05 Labor Berlin - Charité Vivantes GmbH Verfahren zur identitätsverifizierung von patientenproben
US12287321B2 (en) * 2023-09-08 2025-04-29 Truvian Sciences, Inc. Optical multianalyte detection

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US5459073A (en) 1991-05-08 1995-10-17 Streck Laboratories, Inc. Method and composition for preserving antigens and process for utilizing cytological material produced by same
US6030657A (en) 1994-11-01 2000-02-29 Dna Technologies, Inc. Labeling technique for countering product diversion and product counterfeiting
US5776737A (en) 1994-12-22 1998-07-07 Visible Genetics Inc. Method and composition for internal identification of samples
AU4703300A (en) 1999-05-06 2000-11-21 Mount Sinai School Of Medicine Of The City University Of New York, The Dna-based steganography
EP1515268A3 (en) * 2001-03-01 2007-12-12 NTT Data Technology Corporation Method and system for individual authentication and digital signature utilizing article having DNA based ID information mark
WO2003052101A1 (en) * 2001-12-14 2003-06-26 Rosetta Inpharmatics, Inc. Sample tracking using molecular barcodes
GB2390055B (en) 2002-03-22 2005-09-07 Cypher Science Internat Ltd A marking apparatus
US20040157220A1 (en) * 2003-02-10 2004-08-12 Purnima Kurnool Methods and apparatus for sample tracking
US20100285985A1 (en) 2003-04-15 2010-11-11 Applied Dna Sciences, Inc. Methods and Systems for the Generation of Plurality of Security Markers and the Detection Therof
US8927213B2 (en) 2004-12-23 2015-01-06 Greg Hampikian Reference markers for biological samples
WO2005093641A1 (en) * 2004-03-26 2005-10-06 Universite Libre De Bruxelles Biological samples localisation, identification and tracking, system and method using electronic tag
US20150141264A1 (en) 2005-05-20 2015-05-21 Apdn (B.V.I.) Inc. In-field dna extraction, detection and authentication methods and systems therefor
US8785130B2 (en) 2005-07-07 2014-07-22 Bio-Id Diagnostic Inc. Use of markers including nucleotide sequence based codes to monitor methods of detection and identification of genetic material
WO2007018601A1 (en) 2005-08-02 2007-02-15 Rubicon Genomics, Inc. Compositions and methods for processing and amplification of dna, including using multiple enzymes in a single reaction
CN101479750A (zh) * 2006-05-11 2009-07-08 奇异编号有限公司 识别目标物的方法，识别标签，适于被识别的目标物以及相关装置和系统
US20080101666A1 (en) * 2006-10-30 2008-05-01 Cytyc Corporation Automated imaging system with slide marking
WO2009036525A2 (en) 2007-09-21 2009-03-26 Katholieke Universiteit Leuven Tools and methods for genetic tests using next generation sequencing
AU2007254626A1 (en) * 2007-12-21 2009-07-09 Canon Kabushiki Kaisha Data encoding and decoding using circular configurations of marks
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EP2718866B1 (en) * 2011-06-07 2020-09-09 Koninklijke Philips N.V. Providing nucleotide sequence data
US20150083797A1 (en) 2012-05-09 2015-03-26 Apdn (B.V.I.) Inc. Verification of physical encryption taggants using digital representatives and authentications thereof
EP4026912A1 (en) * 2012-05-10 2022-07-13 The General Hospital Corporation Methods for determining a nucleotide sequence
US9968901B2 (en) * 2012-05-21 2018-05-15 The Scripps Research Institute Methods of sample preparation
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BR112015015500B1 (pt) 2012-12-28 2021-10-19 Fleury S.A. Método para o rastreamento completo de um conjunto de amostras biológicas contendo dna ou rna através da identificação do código de barras molecular durante o fluxo de trabalho de laboratório e kit para coleta de amostras biológicas de dna ou rna
WO2014152775A2 (en) 2013-03-14 2014-09-25 Certirx Corporation Nucleic acid-based authentication and identification codes
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Also Published As

Publication number Publication date
KR20190037203A (ko) 2019-04-05
JP2019523652A (ja) 2019-08-29
ES3030501T3 (en) 2025-06-30
CN109477141A (zh) 2019-03-15
KR20230065357A (ko) 2023-05-11
AU2017266299A1 (en) 2018-12-20
EP3458606B1 (en) 2025-04-02
JP7071341B2 (ja) 2022-05-18
AU2023229558B2 (en) 2025-07-31
EP3458606A1 (en) 2019-03-27
KR102806552B1 (ko) 2025-05-13
AU2023229558A1 (en) 2023-09-28
US12297495B2 (en) 2025-05-13
WO2017198742A1 (en) 2017-11-23
CN109477141B (zh) 2022-07-12
EP3458606C0 (en) 2025-04-02
US20190300948A1 (en) 2019-10-03

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