BR112021019514A2 - Detecção automatizada de limites em dados de espectrometria de massa - Google Patents

Detecção automatizada de limites em dados de espectrometria de massa

Info

Publication number
BR112021019514A2
BR112021019514A2 BR112021019514A BR112021019514A BR112021019514A2 BR 112021019514 A2 BR112021019514 A2 BR 112021019514A2 BR 112021019514 A BR112021019514 A BR 112021019514A BR 112021019514 A BR112021019514 A BR 112021019514A BR 112021019514 A2 BR112021019514 A2 BR 112021019514A2
Authority
BR
Brazil
Prior art keywords
mass spectrometry
spectrometry data
boundary detection
automated
automated boundary
Prior art date
Application number
BR112021019514A
Other languages
English (en)
Inventor
Daniel Serie
Zhenqin Wu
Original Assignee
Venn Biosciences Corp
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Venn Biosciences Corp filed Critical Venn Biosciences Corp
Publication of BR112021019514A2 publication Critical patent/BR112021019514A2/pt

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Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G16B40/20—Supervised data analysis
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06N—COMPUTING ARRANGEMENTS BASED ON SPECIFIC COMPUTATIONAL MODELS
    • G06N3/00—Computing arrangements based on biological models
    • G06N3/02—Neural networks
    • G06N3/08—Learning methods
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B5/00—ICT specially adapted for modelling or simulations in systems biology, e.g. gene-regulatory networks, protein interaction networks or metabolic networks
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16H—HEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H10/00—ICT specially adapted for the handling or processing of patient-related medical or healthcare data
    • G16H10/40—ICT specially adapted for the handling or processing of patient-related medical or healthcare data for data related to laboratory analysis, e.g. patient specimen analysis
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16H—HEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H50/00—ICT specially adapted for medical diagnosis, medical simulation or medical data mining; ICT specially adapted for detecting, monitoring or modelling epidemics or pandemics
    • G16H50/20—ICT specially adapted for medical diagnosis, medical simulation or medical data mining; ICT specially adapted for detecting, monitoring or modelling epidemics or pandemics for computer-aided diagnosis, e.g. based on medical expert systems
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16H—HEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H50/00—ICT specially adapted for medical diagnosis, medical simulation or medical data mining; ICT specially adapted for detecting, monitoring or modelling epidemics or pandemics
    • G16H50/70—ICT specially adapted for medical diagnosis, medical simulation or medical data mining; ICT specially adapted for detecting, monitoring or modelling epidemics or pandemics for mining of medical data, e.g. analysing previous cases of other patients

Landscapes

  • Engineering & Computer Science (AREA)
  • Health & Medical Sciences (AREA)
  • Medical Informatics (AREA)
  • Physics & Mathematics (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • General Health & Medical Sciences (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Data Mining & Analysis (AREA)
  • Theoretical Computer Science (AREA)
  • Public Health (AREA)
  • Biophysics (AREA)
  • Epidemiology (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Biotechnology (AREA)
  • Evolutionary Biology (AREA)
  • Databases & Information Systems (AREA)
  • Evolutionary Computation (AREA)
  • Software Systems (AREA)
  • Artificial Intelligence (AREA)
  • Computer Vision & Pattern Recognition (AREA)
  • Bioethics (AREA)
  • Molecular Biology (AREA)
  • Biomedical Technology (AREA)
  • Physiology (AREA)
  • Primary Health Care (AREA)
  • Pathology (AREA)
  • Computational Linguistics (AREA)
  • Computing Systems (AREA)
  • General Engineering & Computer Science (AREA)
  • General Physics & Mathematics (AREA)
  • Mathematical Physics (AREA)
  • Other Investigation Or Analysis Of Materials By Electrical Means (AREA)

Abstract

detecção automatizada de limites em dados de espectrometria de massa. um sistema e método para detecção automatizada da presença ou ausência de uma quantidade com base em intensidades expressas em termos de, ou derivadas de, dados dependentes de frequência ou tempo. de acordo com um exemplo, intensidades de espectrometria de massa são identificadas usando um modelo matemático não linear, tal como uma rede neural artificial treinada para encontrar picos de início e parada de uma intensidade, a partir dos quais uma abundância pode ser determinada.
BR112021019514A 2019-03-29 2020-03-27 Detecção automatizada de limites em dados de espectrometria de massa BR112021019514A2 (pt)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US201962826228P 2019-03-29 2019-03-29
PCT/US2020/025502 WO2020205649A1 (en) 2019-03-29 2020-03-27 Automated detection of boundaries in mass spectrometry data

Publications (1)

Publication Number Publication Date
BR112021019514A2 true BR112021019514A2 (pt) 2021-12-07

Family

ID=70293149

Family Applications (1)

Application Number Title Priority Date Filing Date
BR112021019514A BR112021019514A2 (pt) 2019-03-29 2020-03-27 Detecção automatizada de limites em dados de espectrometria de massa

Country Status (11)

Country Link
US (1) US11869634B2 (pt)
EP (1) EP3948874A1 (pt)
JP (1) JP2022525427A (pt)
KR (1) KR20210145210A (pt)
CN (1) CN113785362A (pt)
AU (1) AU2020253345A1 (pt)
BR (1) BR112021019514A2 (pt)
CA (1) CA3131254A1 (pt)
IL (1) IL286676A (pt)
SG (1) SG11202110748QA (pt)
WO (1) WO2020205649A1 (pt)

Families Citing this family (12)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN113785362A (zh) 2019-03-29 2021-12-10 韦恩生物科技股份公司 质谱数据中边界的自动检测
US11644470B2 (en) * 2019-04-15 2023-05-09 Bioinformatics Solutions Inc. Systems and methods for de novo peptide sequencing using deep learning and spectrum pairs
CN114391099A (zh) * 2019-10-02 2022-04-22 株式会社岛津制作所 波形解析方法和波形解析装置
CN112614550B (zh) * 2020-12-17 2024-03-15 华东理工大学 一种基于神经网络的分子筛x射线衍射图谱峰位置的预测方法
CN113780430B (zh) * 2021-09-14 2024-05-24 天津国科医疗科技发展有限公司 一种基于Hopfield模型的三重四极杆质谱仪谱图分类方法
CN113866817A (zh) * 2021-09-28 2021-12-31 中南大学 基于神经网络的中子衍射峰位预测方法、设备和介质
WO2023075591A1 (en) 2021-10-29 2023-05-04 Venn Biosciences Corporation Ai-driven glycoproteomics liquid biopsy in nasopharyngeal carcinoma
CN113933373B (zh) * 2021-12-16 2022-02-22 成都健数科技有限公司 一种利用质谱数据确定有机物结构的方法和系统
US20230324285A1 (en) * 2022-04-12 2023-10-12 2S Water Incorporated Detection of Water Contamination based on Spectrographic Analysis
CN114755357A (zh) * 2022-04-14 2022-07-15 武汉迈特维尔生物科技有限公司 一种色谱质谱自动积分方法、系统、设备、介质
WO2024133265A1 (en) * 2022-12-19 2024-06-27 Ares Trading S.A. Method for determining peak characteristics on analytical data sets
EP4390390A1 (en) * 2022-12-19 2024-06-26 Ares Trading S.A. Method for determining peak characteristics on analytical data sets

Family Cites Families (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CA2985231A1 (en) * 2015-06-04 2016-12-08 Bioamber Inc. Biobased production of functionalized alpha-substituted acrylates and c4-dicarboxylates
KR102633621B1 (ko) 2017-09-01 2024-02-05 벤 바이오사이언시스 코포레이션 진단 및 치료 모니터링용 바이오마커로서의 당펩티드의 식별 및 용도
WO2019079639A1 (en) 2017-10-18 2019-04-25 Venn Biosciences Corporation IDENTIFICATION AND USE OF BIOLOGICAL PARAMETERS FOR THE DIAGNOSIS AND MONITORING OF A TREATMENT
BR112021008210A2 (pt) * 2018-10-31 2021-08-03 Regeneron Pharmaceuticals, Inc. método e sistema de identificação e quantificação de uma proteína
CN113439213A (zh) 2019-02-01 2021-09-24 韦恩生物科技股份公司 用于诊断卵巢癌的生物标志物
CN113785362A (zh) 2019-03-29 2021-12-10 韦恩生物科技股份公司 质谱数据中边界的自动检测

Also Published As

Publication number Publication date
IL286676A (en) 2021-12-01
JP2022525427A (ja) 2022-05-13
US20200372973A1 (en) 2020-11-26
CN113785362A (zh) 2021-12-10
WO2020205649A9 (en) 2021-05-14
WO2020205649A1 (en) 2020-10-08
KR20210145210A (ko) 2021-12-01
SG11202110748QA (en) 2021-10-28
AU2020253345A1 (en) 2021-11-11
EP3948874A1 (en) 2022-02-09
CA3131254A1 (en) 2020-10-08
US11869634B2 (en) 2024-01-09

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