AU733388B2 - Materials and methods for the modification of plant lignin content - Google Patents

Materials and methods for the modification of plant lignin content Download PDF

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AU733388B2
AU733388B2 AU44036/97A AU4403697A AU733388B2 AU 733388 B2 AU733388 B2 AU 733388B2 AU 44036/97 A AU44036/97 A AU 44036/97A AU 4403697 A AU4403697 A AU 4403697A AU 733388 B2 AU733388 B2 AU 733388B2
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plant
sequence
sequences
dna construct
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Leonard Nathan Bloksberg
Alistair Wallace Grierson
Ilkka Jaakko Havukkala
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Rubicon Forests Holdings Ltd
ArborGen LLC
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Fletcher Challenge Forests Ltd
Genesis Research and Development Corp Ltd
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Description

WO 98/11205 PCT/NZ97/00112 MATERIALS AND METHODS FOR THE MODIFICATION OF PLANT LIGNIN CONTENT Technical Field of the Invention This invention relates to the field of modification of lignin content and composition in plants. More particularly, this invention relates to enzymes involved in the lignin biosynthetic pathway and nucleotide sequences encoding such enzymes.
Backaround of the Invention Lignin is an insoluble polymer which is primarily responsible for the rigidity of plant stems. Specifically, lignin serves as a matrix around the polysaccharide components of some plant cell wails. The higher the lignin content, the more rigid the plant. For example, tree species synthesize large quantities of lignin, with lignin constituting between 20% to 30% of the dry weight of wood. In addition to providing rigidity, lignin aids in water transport within plants by rendering cell walls hydrophobic and water impermeable. Lignin also plays a role in disease resistance of plants by impeding the penetration and propagation of pathogenic agents.
The high concentration of lignin in trees presents a significant problem in the paper industry wherein considerable resources must be employed to separate lignin from the cellulose fiber needed for the production of paper. Methods typically employed for the removal of lignin are highly energy- and chemical-intensive, resulting in increased costs and increased levels of undesirable waste products. In the U.S. alone, about 20 million tons of lignin are removed from wood per year.
Lignin is largely responsible for the digestibility, or lack thereof, of forage crops, with small increases in plant lignin content resulting in relatively high decreases in digestibility. For example, crops with reduced lignin content provide more efficient forage for cattle, with the yield of milk and meat being higher relative to the amount of forage crop consumed. During normal plant growth, the increase in dry matter content is accompanied by a corresponding decrease in digestibility. When deciding on the optimum time to harvest forage crops, farmers must therefore chose between a high yield of less digestible material and a lower yield of more digestible material.
f, 6 WO 98/11205 PCT/NZ97/00112 For some applications, an increase in lignin content is desirable since increasing the lignin content of a plant would lead to increased mechanical strength of wood, changes in its color and increased resistance to rot. Mycorrhizal species composition and abundance may also be favorably manipulated by modifying lignin content and structural composition.
As discussed in detail below, lignin is formed by polymerization of at least three different monolignols which are synthesized in a multistep pathway, each step in the pathway being catalyzed by a different enzyme. It has been shown that manipulation of the number of copies of genes encoding certain enzymes, such as cinnamvl alcohol dehydrogenase (CAD) and caffeic acid 3-0-methyltransferase (COMT) results in modification of the amount of lignin produced; see, for example, U.S. Patent No.
5,451,514 and PCT publication no. WO 94/23044. Furthermore, it has been shown that antisense expression of sequences encoding CAD in poplar leads to the production of lignin having a modified composition (Grand, C. et al. Planta (Berl.) 163:232-237 (1985)).
While DNA sequences encoding some of the enzymes involved in the lignin biosynthetic pathway have been isolated for certain species of plants, genes encoding many of the enzymes in a wide range of plant species have not yet been identified.
Thus there remains a need in the art for materials useful in the modification of lignin content and composition in plants and for methods for their use.
Summary of the Invention Briefly, the present invention provides isolated DNA sequences obtainable from eucalyptus and pine which encode enzymes involved in the lignin biosynthetic pathway, DNA constructs including such sequences, and methods for the use of such constructs. Transgenic plants having altered lignin content and composition are also provided.
In a first aspect, the present invention provides isolated DNA sequences coding for the following enzymes isolated from eucalyptus and pine: cinnamate 4-hydroxylase (C4H), coumarate 3-hydroxylase (C3H), phenolase (PNL), O-methyl transferase (OMT), cinnamyl alcohol dehydrogenase (CAD), cinnamoyl-CoA reductase (CCR), phenylalanine ammonia-lyase (PAL), 4-coumarate:CoA ligase (4CL), coniferol glucosyl transferase (CGT), coniferin beta-glucosidase (CBG), laccase (LAC) and peroxidase (POX), together with ferulate-5-hydroxylase (F5H) from eucalyptus. In one embodiment, the isolated DNA sequences comprise a nucleotide sequence selected from the group consisting of: sequences recited in SEQ ID NO: 3, 13, 16-70, and 72-88; complements of the sequences recited in SEQ ID NO: 3, 13, 16-70, 72-88; reverse complements of the sequences recited in SEQ ID NO: 3, 13, 16-70, 72-88; (d) reverse sequences of the sequences recited in SEQ ID NO: 3, 13, 16-70, 72- 88; and sequences having at least about a 99% probability of being the to same as a sequence of as measured by the computer algorithm FASTA. In a preferred embodiment, the isolated DNA sequences comprise a nucleotide sequence selected from the group consisting of: nucleotides 1-535 of SEQ ID NO: 1; nucleotides 46-671 of SEQ ID NO: 2; nucleotides 1-535 of
*SSS
*SS*
S.
SEQ
15 SEQ
SEQ
SEQ
SEQ
SEQ
20 SEQ
SEQ
SEQ
SEQ
SEQ
SEQ
SEQ
ID NO: ID NO: ID NO: ID NO: ID NO: ID NO: ID NO: ID NO: ID NO: ID NO: ID NO: ID NO: ID NO: nucleotides 290-949 of SEQ ID NO: 4; nucleotides 15-959 nucleotides 15-1026 of SEQ ID NO: 6; nucleotides 15-1454 nucleotides 15-740 of SEQ ID NO: 8; nucleotides 108-624 9; nucleotides nucleotides nucleotides nucleotides nucleotides nucleotides nucleotides nucleotides nucleotides nucleotides 68-274 of SEQ ID NO: 10; nucleotides 1-765 1-384 of SEQ ID NO: 12; nucleotides 1-278 14-472 of SEQ ID NO: 16; nucleotides 1-672 15-469 of SEQ ID NO: 18; nucleotides 15-469 1-341 of SEQ ID NO: 20; nucleotides 15-387 1-443 of SEQ ID NO: 22; nucleotides 15-607 15-421 of SEQ ID NO: 24; nucleotides 1-760 58-469 of SEQ ID NO: 26; nucleotides 15-495 15-472 of SEQ ID NO: 28; nucleotides 13-396 15-592 of SEQ ID NO: 30; nucleotides 15-468 SEQ ID NO: 31; nucleotides 1-405 of SEQ ID NO: 32; nucleotides 1-380 of 7/03/01 3a SEQ ID NO: 33; nucleotides 1-305 of SEQ ID NO: 34; nucleotides 15-693 of SEQ ID NO: 35; nucleotides 1-418 of SEQ ID NO: 36; nucleotides 15-777 of SEQ ID NO: 37; nucleotides 1-344 of SEQ ID NO: 38; nucleotides 1-341 of SEQ ID NO: 39; nucleotides 15-358 of SEQ ID NO: 40; nucleotides 1-409 of SEQ ID NO: 41; nucleotides 1-515 of SEQ ID NO: 42; nucleotides 15-471 of SEQ ID NO: 43; nucleotides 15-487 of SEQ ID NO: 44; nucleotides 108-664 of SEQ ID NO: 45; nucleotides 15-418 of SEQ ID NO: 46; nucleotides 65-479 of SEQ ID NO: 47; nucleotides 127-1785 of SEQ ID NO: 48; nucleotides 15-475 of SEQ ID NO: 49; nucleotides 288-801 of SEQ ID NO: 50; nucleotides 51- 711 of SEQ ID NO: 51; nucleotides 1-426 of SEQ ID NO: 52; nucleotides 92- 562 of SEQ ID NO: 53; nucleotides 1-1074 of SEQ ID NO: 54; nucleotides 1- 1075 of SEQ ID NO: 55; nucleotides 1-1961 of SEQ ID NO: 56; nucleotides 1- 1010 of SEQ ID NO: 57; nucleotides 15-741 of SEQ ID NO: 58; nucleotides 1- 643 of SEQ ID NO: 59; nucleotides 15-441 of SEQ ID NO: 60; nucleotides 15 913 of SEQ ID NO: 61; nucleotides 15-680 of SEQ ID NO: 62; nucleotides 492 of SEQ ID NO: 63; nucleotides 15-524 of SEQ ID NO: 64; nucleotides 1- S: 492 of SEQ ID NO: 63; nucleotides 1-524 of SEQ ID NO: 64; nucleotides 176- :609417 of SEQ ID NO: 65; nucleotides 1-511 of SEQ ID NO: 66; nucleotides 176- 609 of SEQ ID NO: 67; nucleotides 1-4746-608 of SEQ ID NO: 68; nucleotides 1-474 1474 of SEQ ID NO: 71 nucleotides 15-1038 of SEQ ID NO: 7; nucleotides 1- 372 of SEQ ID NO: 73; nucleotides 18-545 of SEQ ID NO: 74; nucleotides 4637 of SEQ ID NO: 75; nucleotides 32-435 of SEQ ID NO: 76; nucleotides 3451 of SEQ ID NO: 77; nucleotides 1-374 of SEQ ID NO: 78; nucleotides 1-457 of SEQ ID NO: 79; nucleotides 1-346 of SEQ ID NO: 80; nucleotides 15-957 of SEQ ID NO: 81; nucleotides 40-452 of SEQ ID NO: 82; nucleotides 15-471 of SEQ ID NO: 83; nucleotides 1-338 of SEQ ID NO: 84; nucleotides 150-1229 of 7/03/01 SEQ ID NO: 85; nucleotides 1-1410 of SEQ ID NO: 86; nucleotides 1-687 of SEQ ID NO: 87; and nucleotides 1-688 of SEQ ID NO: 88.
In another aspect, the invention provides DNA constructs comprising a DNA sequence of the present invention, either alone, in combination with one or more of the inventive sequences or in combination with one or more known DNA sequences; together with transgenic cells comprising such constructs.
In a related aspect, the present invention provides DNA constructs comprising, in the direction, a gene promoter sequence; an open reading frame coding for at least a functional portion of an enzyme encoded by the io inventive DNA sequences or variants thereof; and a gene termination sequence. The open reading frame may be orientated in either a sense or antisense direction. DNA constructs comprising a non-coding region of a gene coding for an enzyme encoded by the above DNA sequences or a nucleotide sequence complementary to a non-coding region, together with a gene :5 promoter sequence and a gene termination sequence, are also provided.
Preferably, the gene promoter and termination sequences are functional in a host plant. Most preferably, the gene promoter and termination sequences are those of the original enzyme genes but others generally used in the art, such as the Cauliflower Mosaic Virus (CMV) promoter, with or without enhancers, such as the Kozak sequence or Omega enhancer, and Agrobacterium tumefaciens nopalin synthase terminator may be usefully employed in the present invention. Tissue-specific promoters may be employed in order to target expression to one or more desired tissues. In a preferred embodiment, the gene promoter sequence provides for transcription in xylem. The DNA construct may further include a marker for the identification of transformed cells.
7/03/01 WO 98/11205 PCT/NZ97/00112 In a further aspect, transgenic plant cells comprising the DNA constructs of the present invention are provided, together with plants comprising such transgenic cells, and fruits and seeds of such plants.
In yet another aspect, methods for modulating the lignin content and composition of a plant are provided, such methods including stably incorporating into the genome of the plant a DNA construct of the present invention. In a preferred embodiment, the target plant is a woody plant, preferably selected from the group consisting of eucalyptus and pine species, most preferably from the group consisting of Eucalyptus grandis and Pinus radiata. In a related aspect, a method for producing a plant having altered lignin content is provided, the method comprising transforming a plant cell with a DNA construct of the present invention to provide a transgenic cell, and cultivating the transgenic cell under conditions conducive to regeneration and mature plant growth.
In yet a further aspect, the present invention provides methods for modifying the activity of an enzyme in a plant, comprising stably incorporating into the genome of the plant a DNA construct of the present invention. In a preferred embodiment, the target plant is a woody plant, preferably selected from the group consisting of eucalyptus and pine species, most preferably from the group consisting of Eucalyptus grandis and Pinus radiata.
The above-mentioned and additional features of the present invention and the manner of obtaining them will become apparent, and the invention will be best understood by reference to the following more detailed description, read in conjunction with the accompanying drawing.
Brief Description of the Figures Fig. 1 is a schematic overview of the lignin biosynthetic pathway.
Detailed Description Lignin is formed by polymerization of at least three different monolignols, primarily para-coumaryl alcohol, coniferyl alcohol and sinapyl alcohol. While these three types of lignin subunits are well known, it is possible that slightly different variants of these subunits may be involved in the lignin biosynthetic pathway in various WO 98/11205 PCT/NZ97/00112 plants. The relative concentration of these residues in lignin varies between different plant species and within species. In addition, the composition of lignin may also vary between different tissues within a specific plant. The three monolignols are derived from phenylalanine in a multistep process and are believed to be polymerized into lignin by a free radical mechanism.
Fig. 1 shows the different steps in the biosynthetic pathway for coniferyl alcohol together with the enzymes responsible for catalyzing each step. para-Coumaryl alcohol and sinapyl alcohol are synthesized by similar pathways. Phenylalanine is first deaminated by phenylalanine ammonia-lyase (PAL) to give cinnamate which is then hydroxylated by cinnamate 4-hydroxylase (C4H) to form p-coumarate. p-Coumarate is hydroxylated by coumarate 3-hydroxylase to give caffeate. The newly added hydroxyl group is then methylated by O-methyl transferase (OMT) to give ferulate which is conjugated to coenzyme A by 4-coumarate:CoA ligase (4CL) to form feruloyl-CoA.
Reduction of feruloyl-CoA to coniferaldehyde is catalyzed by cinnamoyl-CoA reductase (CCR). Coniferaldehyde is further reduced by the action of cinnamyl alcohol dehydrogenase (CAD) to give coniferyl alcohol which is then converted into its glucosylated form for export from the cytoplasm to the cell wall by coniferol glucosyl transferase (CGT). Following export, the de-glucosylated form of coniferyl alcohol is obtained by the action of coniferin beta-glucosidase (CBG). Finally, polymerization of the three monolignols to provide lignin is catalyzed by phenolase (PNL), laccase (LAC) and peroxidase (POX).
The formation of sinapyl alcohol involves an additional enzyme, hydroxylase (F5H). For a more detailed review of the lignin biosynthetic pathway, see: Whetton, R. and Sederoff, The Plant Cell, 7:1001-1013 (1995).
Quantitative and qualitative modifications in plant lignin content are known to be induced by external factors such as light stimulation, low calcium levels and mechanical stress. Synthesis of new types of lignins, sometimes in tissues not normally lignified, can also be induced by infection with pathogens. In addition to lignin, several other classes of plant products are derived from phenylalanine, including flavonoids, coumarins, stilbenes and benzoic acid derivatives, with the initial steps in the synthesis of all these compounds being the same. Thus modification of the action of PAL, C4H and 4CL may affect the synthesis of other plant products in addition to lignin.
6 Using the methods and materials of the present invention, the lignin content of a plant can be increased by incorporating additional copies of genes encoding enzymes involved in the lignin biosynthetic pathway into the genome of the target plant. Similarly, a decrease in lignin content can be obtained by transforming the target plant with antisense copies of such genes. In addition, the number of copies of genes encoding for different enzymes in the lignin biosynthetic pathway can be manipulated to modify the relative amount of each monolignol synthesized, thereby leading to the formation of lignin having altered composition. The alteration of lignin composition would be advantageous, for example, in tree processing for paper, and may also be effective in altering the palatability of wood materials to rotting fungi.
In one embodiment, the present invention provides isolated complete or partial DNA sequences encoding, or partially encoding, enzymes involved 15 in the lignin biosynthetic pathway, the DNA sequences being obtainable from eucalyptus and pine. Specifically, the present invention provides isolated DNA sequences encoding the enzymes CAD (SEQ ID NO: 1, in 96*.
particular nucleotides 1 535; and SEQ ID NO: 30, in particular nucleotides 15 592), PAL (SEQ ID NO: 16, in particular nucleotides 14 20 472), C4H (SEQ ID NO: 17, in particular nucleotides 1 672), C3H (SEQ ID NO: 18, in particular nucleotides 15 469), F5H (SEQ ID NO: 19, in particular nucleotides 15 469; SEQ ID NO: 20, in particular nucleotides 1 341; and SEQ ID NO: 21, in particular nucleotides 15 387), OMT (SEQ ID NO: 22, in particular nucleotides 1 443; SEQ ID NO: 23, in particular nucleotides 15 607; SEQ ID NO: 24, in particular nucleotides 15 421; and SEQ ID NO: 25, in particular nucleotides 1 760), CCR (SEQ ID NO: 26, in particular nucleotides 58 469; SEQ ID NO: 27, in particular 7/03/01 nucleotides 15 495; SEQ ID NO: 28, in particular nucleotides 15 472; and SEQ ID NO: 29, in particular nucleotides 13 396), CGT (SEQ ID NO: 31, in particular nucleotides 15 468; SEQ ID NO: 32, in particular nucleotides 1 405; and SEQ ID NO: 33, in particular nucleotides 1 380), CBG (SEQ ID NO: 34, in particular nucleotides 1 305), PNL (SEQ ID NO: in particular nucleotides 15 693; and SEQ ID NO: 36, in particular nucleotides 1 418), LAC (SEQ ID NO: 37, in particular nucleotides 15 777; SEQ ID NO: 38, in particular nucleotides 1 344; SEQ ID NO: 39, in particular nucleotides 1 341; SEQ ID NO: 40, in particular nucleotides 358; and SEQ ID NO: 41, in particular nucleotides 1 409) and POX (SEQ ID NO: 42, in particular nucleotides 1 515; SEQ ID NO: 43, in particular nucleotides 15 571; and SEQ ID NO: 44, in particular nucleotides 15 487) from Eucalyptus grandis; and the enzymes C4H (SEQ ID NO: 2, in particular nucleotides 46 671; SEQ ID NO: 3, in particular S 15 nucleotides 1 535; SEQ ID NO: 48, in particular nucleotides 127 1785; and SEQ ID NO: 49, in particular nucleotides 15 475), C3H (SEQ ID NO: 4, in particular nucleotides 290 949; SEQ ID NO: 50, in particular nucleotides 288 801; SEQ ID NO: 51, in particular nucleotides 51 711; and SEQ ID NO: 52, in particular nucleotides 1 426), PNL (SEQ ID NO: 20 in particular nucleotides 15 959; and SEQ ID NO: 81, in particular nucleotides 15 957), OMT (SEQ ID NO: 6, in particular nucleotides 15 1026; SEQ ID NO: 53, in particular nucleotides 92 562; SEQ ID NO: 54, eat* in particular nucleotides 1 1074; and SEQ ID NO: 55, in particular nucleotides 1 1075), CAD (SEQ ID NO: 7, in particular nucleotides 15 1454; and SEQ ID NO: 71, in particular nucleotides 15 1474), CCR (SEQ ID NO: 8, in particular nucleotides 15 740; SEQ ID NO: 58, in particular nucleotides 15 741; SEQ ID NO: 59, in particular nucleotides 1 643; 7/03/01 6b SEQ ID NO: 60, in particular nucleotides 15 441; SEQ ID NO: 61, in particular nucleotides 15 913; SEQ ID NO: 62, in particular nucleotides 680; SEQ ID NO: 63, in particular nucleotides 15 492; SEQ ID NO: 64, in particular nucleotides 15 524; SEQ ID NO: 65, in particular nucleotides 1 417; SEQ ID NO: 66, in particular nucleotides 1 511; SEQ ID NO: 67, in particular nucleotides 176 609; SEQ ID NO: 68, in particular nucleotides 1 474; SEQ ID NO: 69, in particular nucleotides 1 474; and SEQ ID NO: 70, in particular nucleotides 176 608), PAL (SEQ ID NO: 9, in particular nucleotides 108 624; SEQ ID NO: 10, in particular o0 nucleotides 68 274; SEQ ID NO: 11, in particular nucleotides 1 765; SEQ ID NO: 45, in particular nucleotides 108 664; SEQ ID NO: 46, in particular nucleotides 15 418; and SEQ ID NO: 47, in particular nucleotides 65 479), 4CL (SEQ ID NO: 12, in particular nucleotides 1 384; SEQ ID NO: 56, in particular nucleotides 1 1961; and SEQ ID NO: 15 57, in particular nucleotides 1 1010), CGT (SEQ ID NO: 72, in particular nucleotides 15 1038), CBG (SEQ ID NO: 73, in particular nucleotides 1 372; SEQ ID NO: 74, in particular nucleotides 18 545; SEQ ID NO: in particular nucleotides 40 463; SEQ ID NO: 76, in particular nucleotides 32 435; SEQ ID NO: 77, in particular nucleotides 15 451; SEQ ID NO: 20 78, in particular nucleotides 1 374; SEQ ID NO: 79, in particular nucleotides 1 457; and SEQ ID NO: 80, in particular nucleotides 1 346), LAC (SEQ ID NO: 82, in particular nucleotides 40 452; SEQ ID NO: 83, in particular nucleotides 15 471; and SEQ ID NO: 84, in particular nucleotides 1 338) and POX (SEQ ID NO: 13, in particular nucleotides 1 278; SEQ ID NO: 85, in particular nucleotides 150 1229; SEQ ID NO: 86, in particular nucleotides 1 1410; SEQ ID NO: 87, in particular nucleotides 1 687; and SEQ ID NO: 88, in particular nucleotides 1 688) 7/03/01 from Pinus radiata. Complements of such isolated DNA sequences, reverse complements of such isolated DNA sequences and reverse sequences of such isolated DNA sequences, together with variants of such sequences, are also provided. DNA sequences encompassed by the present invention include cDNA, genomic DNA, recombinant DNA and wholly or partially chemically synthesized DNA molecules.
The definition of the terms "complement", "reverse complement" and "reverse sequence", as used herein, is best illustrated by the following example. For the sequence 5' AGGACC the complement, reverse complement and reverse sequence are as follows: ee 7/03/01 WO 98/11205 PCT/NZ97/00112 complement 3' TCCTGG reverse complement 3' GGTCCT reverse sequence 5' CCAGGA 3'.
As used herein, the term "variant" covers any sequence which exhibits at least about 50%, more preferably at least about 70% and, more preferably yet, at least about 90% identity to a sequence of the present invention. Most preferably, a "variant" is any sequence which has at least about a 99% probability of being the same as the inventive sequence. The probability for DNA sequences is measured by the computer algorithm FASTA (version 2.0u4, February 1996; Pearson W. R. et al..
Proc. Natl. Acad. Sci., 85:2444-2448, 1988), the probability for translated DNA sequences is measured by the computer algorithm TBLASTX and that for protein sequences is measured by the computer algorithm BLASTP (Altschul, S. F. et al. J.
Mol. Biol., 215:403-410, 1990). The term "variants" thus encompasses sequences wherein the probability of finding a match by chance (smallest sum probability) in a database, is less than about 1% as measured by any of the above tests.
Variants of the isolated sequences from other eucalyptus and pine species, as well as from other commercially important species utilized by the lumber industry, are contemplated. These include the following gymnosperms, by way of example: loblolly pine Pinus taeda, slash pine Pinus elliotti, sand pine Pinus clausa, longleaf pine Pinus palustrus, shortleaf pine Pinus echinata, ponderosa pine Pinus ponderosa, Jeffrey pine Pinus jeffrey, red pine Pinus resinosa, pitch pine Pinus rigida, jack pine Pinus banksiana, pond pine Pinus serotina, Eastern white pine Pinus strobus, Western white pine Pinus monticola, sugar pine Pinus lambertiana, Virginia pine Pinus virginiana, lodgepole pine Pinus contorta, Caribbean pine Pinus caribaea, P. pinaster, Calabrian pine P. brutia, Afghan pine P. eldarica, Coulter pine P. coulteri, European pine P.
nigra and P. sylvestris; Douglas-fir Pseudotsuga menziesii; the hemlocks which include Western hemlock Tsuga heterophylla, Eastern hemlock Tsuga canadensis, Mountain hemlock Tsuga mertensiana; the spruces which include the Norway spruce Picea abies, red spruce Picea rubens, white spruce Picea glauca, black spruce Picea mariana, Sitka spruce Picea sitchensis, Englemann spruce Picea engelmanni, and blue spruce Picea pungens; redwood Sequoia sempervirens; the true firs include the Alpine fir Abies lasiocarpa, silver fir Abies amabilis, grand fir Abies grandis, noble fir Abies procera, white fir Abies concolor, California red fir Abies magnifica, and balsam fir Abies balsamea, the cedars which include the Western red cedar Thuja plicata, incense -7- WO 98/11205 PCT/NZ97/00112 cedar libocedrus decurrens, Northern white cedar Thuja occidentalis, Port Orford cedar Chamaecyparis lawsoniona, Atlantic white cedar Chamaecyparis thyoides, Alaska yellow-cedar Chamaecyparis nootkatensis, and Eastern red cedar Huniperus virginiana; the larches which include Eastern larch Larix laricina, Western larch Larix occidentalis, European larch Larix decidua, Japanese larch Larix leptolepis, and Siberian larch Larix siberica; bold cypress Taxodium distichum and Giant sequoia Sequoia gigantea; and the following angiosperms, by way of example: Eucalyptus alba, E. bancroftii, E. botyroides, E. bridgesiana, E. calophylla, E.
camaldulensis. E. citriodora, E. cladocalyx, E. coccifera, E. curtisii, E. dalrympleana, E.
deglupta E. delagatensis, E. diversicolor, E. dunnii, E. ficifolia, E. globulus, E.
gomphocephala E. gunnii, E. henryi, E. laevopinea, E. macarthurii, E. macrorhyncha.
E. maculata, E. marginata, E. megacarpa, E. melliodora, E. nicholii, E. nitens, E. novaanglica. E. obliqua, E. obtusiflora, E. oreades, E. pauciflora, E. polybractea, E. regnans, E. resinifera, E. robusta, E. rudis, E. saligna, E. sideroxylon, E. stuartiana, E. tereticoris, E. torelliana, E. umigera, E. urophylla, E. viminalis, E. viridis, E. wandoo and E.
youmanni.
The inventive DNA sequences may be isolated by high throughput sequencing of cDNA libraries such as those prepared from Eucalyptus grandis and Pinus radiata as described below in Examples 1 and 2. Alternatively, oligonucleotide probes based on the sequences provided in SEQ ID NO: 1-13 and 16-88 can be synthesized and used to identify positive clones in either cDNA or genomic DNA libraries from Eucalyptus grandis and Pinus radiata, or from other gymnosperms and angiosperms including those identified above, by means of hybridization or PCR techniques.
Probes can be shorter than the sequences provided herein but should be at least about 10, preferably at least about 15 and most preferably at least about nucleotides in length. Hybridization and PCR techniques suitable for use with such oligonucleotide probes are well known in the art. Positive clones may be analyzed by restriction enzyme digestion, DNA sequencing or the like.
In addition, the DNA sequences of the present invention may be generated by synthetic means using techniques well known in the art. Equipment for automated synthesis of oligonucleotides is commercially available from suppliers such as Perkin Elmer/Applied Biosystems Division (Foster City, CA) and may be operated according to the manufacturer's instructions.
-8- WO 98/11205 PCT/NZ97/00112 In one embodiment, the DNA constructs of the present invention include an open reading frame coding for at least a functional portion of an enzyme encoded by a nucleotide sequence of the present invention or a variant thereof. As used herein, the "functional portion" of an enzyme is that portion which contains the active site essential for affecting the metabolic step, i.e. the portion of the molecule that is capable of binding one or more reactants or is capable of improving or regulating the rate of reaction. The active site may be made up of separate portions present on one or more polypeptide chains and will generally exhibit high substrate specificity. The term "enzyme encoded by a nucleotide sequence" as used herein, includes enzymes encoded i0 by a nucleotide sequence which includes the partial isolated DNA sequences of the present invention.
For applications where amplification of lignin synthesis is desired, the open reading frame is inserted in the DNA construct in a sense orientation, such that transformation of a target plant with the DNA construct will lead to an increase in the number of copies of the gene and therefore an increase in the amount of enzyme. When down-regulation of lignin synthesis is desired, the open reading frame is inserted in the DNA construct in an antisense orientation, such that the RNA produced by transcription of the DNA sequence is complementary to the endogenous mRNA sequence. This, in turn, will result in a decrease in the number of copies of the gene and therefore a decrease in the amount of enzyme. Alternatively, regulation can be achieved by inserting appropriate sequences or subsequences DNA or RNA) in ribozyme constructs.
In a second embodiment, the inventive DNA constructs comprise a nucleotide sequence including a non-coding region of a gene coding for an enzyme encoded by a DNA sequence of the present invention, or a nucleotide sequence complementary to such a non-coding region. As used herein the term "non-coding region" includes both transcribed sequences which are not translated, and non-transcribed sequences within about 2000 base pairs 5' or 3' of the translated sequences or open reading frames.
Examples of non-coding regions which may be usefully employed in the inventive constructs include introns and 5'-non-coding leader sequences. Transformation of a target plant with such a DNA construct may lead to a reduction in the amount of lignin synthesized by the plant by the process of cosuppression, in a manner similar to that WO 98/11205 PCT/NZ97/00112 discussed, for example, by Napoli et al. (Plant Cell 2:279-290, 1990) and de Carvalho Niebel et al. (Plant Cell 7:347-358, 1995).
The DNA constructs of the present invention further comprise a gene promoter sequence and a gene termination sequence, operably linked to the DNA sequence to be transcribed, which control expression of the gene. The gene promoter sequence is generally positioned at the 5' end of the DNA sequence to be transcribed, and is employed to initiate transcription of the DNA sequence. Gene promoter sequences are generally found in the 5' non-coding region of a gene but they may exist in introns (Luehrsen, K. Mol. Gen. Genet. 225:81-93, 1991) or in the coding region, as for l0 example in PAL of tomato (Bloksberg, 1991. Studies on the Biology of Phenylalanine Ammonia Lyase and Plant Pathogen Interaction. Ph.D. Thesis. Univ. of California, Davis, University Microfilms International order number 9217564). When the construct includes an open reading frame in a sense orientation, the gene promoter sequence also initiates translation of the open reading frame. For DNA constructs comprising either an open reading frame in an antisense orientation or a non-coding region, the gene promoter sequence consists only of a transcription initiation site having a RNA polymerase binding site.
A variety of gene promoter sequences which may be usefully employed in the DNA constructs of the present invention are well known in the art. The promoter gene sequence, and also the gene termination sequence, may be endogenous to the target plant host or may be exogenous, provided the promoter is functional in the target host.
For example, the promoter and termination sequences may be from other plant species, plant viruses, bacterial plasmids and the like. Preferably, gene promoter and termination sequences are from the inventive sequences themselves.
Factors influencing the choice of promoter include the desired tissue specificity of the construct, and the timing of transcription and translation. For example, constitutive promoters, such as the 35S Cauliflower Mosaic Virus (CaMV promoter, will affect the activity of the enzyme in all parts of the plant. Use of a tissue specific promoter will result in production of the desired sense or antisense RNA only in the tissue of interest. With DNA constructs employing inducible gene promoter sequences, the rate of RNA polymerase binding and initiation can be modulated by external stimuli, such as light, heat, anaerobic stress, alteration in nutrient conditions WO 98/11205 PCT/NZ97/00112 and the like. Temporally regulated promoters can be employed to effect modulation of the rate of RNA polymerase binding and initiation at a specific time during development of a transformed cell. Preferably, the original promoters from the enzyme gene in question, or promoters from a specific tissue-targeted gene in the organism to be transformed, such as eucalyptus or pine are used. Other examples of gene promoters which may be usefully employed in the present invention include, mannopine synthase (mas), octopine synthase (ocs) and those reviewed by Chua et al. (Science. 244:174- 181, 1989).
The gene termination sequence, which is located 3' to the DNA sequence to be transcribed, may come from the same gene as the gene promoter sequence or may be from a different gene. Many gene termination sequences known in the art may be usefully employed in the present invention, such as the 3' end of the Agrobacterium tumefaciens nopaline synthase gene. However, preferred gene terminator sequences are those from the original enzyme gene or from the target species to be transformed.
The DNA constructs of the present invention may also contain a selection marker that is effective in plant cells, to allow for the detection of transformed cells containing the inventive construct. Such markers, which are well known in the art, typically confer resistance to one or more toxins. One example of such a marker is the NPTII gene whose expression results in resistance to kanamycin or hygromycin, antibiotics which is usually toxic to plant cells at a moderate concentration (Rogers et al. in Methods for Plant Molecular Biologv, A. Weissbach and H. Weissbach. eds., Academic Press Inc., San Diego, CA (1988)). Alternatively, the presence of the desired construct in transformed cells can be determined by means of other techniques well known in the art, such as Southern and Western blots.
Techniques for operatively linking the components of the inventive DNA constructs are well known in the art and include the use of synthetic linkers containing one or more restriction endonuclease sites as described, for example, by Maniatis et al., (Molecular Cloning: A Laboratory Manual, Cold Spring Harbor Laboratories, Cold Spring Harbor, NY, 1989). The DNA construct of the present invention may be linked to a vector having at least one replication system, for example, E. coli, whereby after each manipulation, the resulting construct can be cloned and sequenced and the correctness of the manipulation determined.
WO 98/11205 PCT/NZ97/00112 The DNA constructs of the present invention may be used to transform a variety of plants, both monocotyledonous grasses, corn, grains, oat, wheat and barley), dicotyledonous Arabidopsis, tobacco, legumes, alfalfa, oaks, eucalyptus, maple), and Gymnosperms Scots pine (Aronen, Finnish Forest Res. Papers, vol. 595, 1996), white spruce (Ellis et al., Biotechnologv 11:94-92, 1993), larch (Huang et al., In Vitro Cell 27:201-207, 1991). In a preferred embodiment, the inventive DNA constructs are employed to transform woody plants, herein defined as a tree or shrub whose stem lives for a number of years and increases in diameter each year by the addition of woody tissue. Preferably the target plant is selected from the group consisting of eucalyptus and pine species, most preferably from the group consisting of Eucalyptus grandis and Pinus radiata. As discussed above, transformation of a plant with a DNA construct including an open reading frame coding for an enzyme encoded by an inventive DNA sequence wherein the open reading frame is orientated in a sense direction will lead to an increase in lignin content of the plant or, in some cases, to a decrease by cosuppression. Transformation of a plant with a DNA construct comprising an open reading frame in an antisense orientation or a non-coding (untranslated) region of a gene will lead to a decrease in the lignin content of the transformed plant.
Techniques for stably incorporating DNA constructs into the genome of target plants are well known in the art and include Agrobacterium tumefaciens mediated introduction, electroporation, protoplast fusion, injection into reproductive organs, injection into immature embryos, high velocity projectile introduction and the like. The choice of technique will depend upon the target plant to be transformed. For example, dicotyledonous plants and certain monocots and gymnosperms may be transformed by Agrobacterium Ti plasmid technology, as described, for example by Bevan (Nucl. Acid Res. 12:8711-8721, 1984). Targets for the introduction of the DNA constructs of the present invention include tissues, such as leaf tissue, disseminated cells, protoplasts, seeds, embryos, meristematic regions; cotyledons, hypocotyls, and the like. One preferred method for transforming eucalyptus and pine is a biolistic method using pollen (see, for example, Aronen 1996, Finnish Forest Res. Papers vol. 595, 53pp) or easily regenerable embryonic tissues. Other transformation techniques which may be usefully employed in the inventive methods include those taught by Ellis et al. (Plant WO 98/11205 PCT/NZ97/00112 Cell Reports, 8:16-20, 1989), Wilson et al. (Plant Cell Reports 7:704-707, 1989) and Tautorus et al. (Theor. Appl. Genet. 78:531-536, 1989).
Once the cells are transformed, cells having the inventive DNA construct incorporated in their genome may be selected by means of a marker, such as the kanamycin resistance marker discussed above. Transgenic cells may then be cultured in an appropriate medium to regenerate whole plants, using techniques well known in the art. In the case of protoplasts, the cell wall is allowed to reform under appropriate osmotic conditions. In the case of seeds or embryos, an appropriate germination or callus initiation medium is employed. For explants, an appropriate regeneration medium is used. Regeneration of plants is well established for.many species. For a review of regeneration of forest trees see Dunstan et al., Somatic embryogenesis in woody plants. In: Thorpe, T.A. ed., 1995: in vitro embryogenesis of plants. Vol. 20 in Current Plant Science and Biotechnology in Agriculture, Chapter 12, pp. 471-540.
Specific protocols for the regeneration of spruce are discussed by Roberts et al., (Somatic Embryogenesis of Spruce. In: Synseed. Applications of synthetic seed to crop improvement. Redenbaugh, ed. CRC Press, Chapter 23, pp. 427-449, 1993). The resulting transformed plants may be reproduced sexually or asexually, using methods well known in the art, to give successive generations of transgenic plants.
As discussed above, the production of RNA in target plant cells can be controlled by choice of the promoter sequence, or by selecting the number of functional copies or the site of integration of the DNA sequences incorporated into the genome of the target plant host. A target plant may be transformed with more than one DNA construct of the present invention, thereby modulating the lignin biosynthetic pathway for the activity of more than one enzyme, affecting enzyme activity in more than one tissue or affecting enzyme activity at more than one expression time. Similarly, a DNA construct may be assembled containing more than one open reading frame coding for an enzyme encoded by a DNA sequence of the present invention or more than one noncoding region of a gene coding for such an enzyme. The DNA sequences of the present inventive may also be employed in combination with other known sequences encoding enzymes involved in the lignin biosynthetic pathway. In this manner, it may be possible to add a lignin biosynthetic pathway to a non-woody plant to produce a new woody plant.
WO 98/11205 PCT/NZ97/00112 The isolated DNA sequences of the present invention may also be employed as probes to isolate DNA sequences encoding enzymes involved in the lignin synthetic pathway from other plant species, using techniques well known to those of skill in the art.
The following examples are offered by way of illustration and not by way of limitation.
Example 1 Isolation and Characterization of cDNA Clones from Eucalyptus grandis Two Eucalyptus grandis cDNA expression libraries (one from a mixture of various tissues from a single tree and one from leaves of a single tree) were constructed and screened as follows.
mRNA was extracted from the plant tissue using the protocol of Chang et al.
(Plant Molecular Biology Reporter 11:113-116 (1993)) with minor modifications.
Specifically, samples were dissolved in CPC-RNAXB (100 mM Tris-CI, pH 8,0; mM EDTA; 2.0 M NaCl; 2%CTAB; 2% PVP and 0.05% Spermidine*3 HCl)and extracted with Chloroform:isoamyl alcohol, 24:1. mRNA was precipitated with ethanol and the total RNA preparate was purified using a Poly(A) Quik mRNA Isolation Kit (Stratagene, La Jolla, CA). A cDNA expression library was constructed from the purified mRNA by reverse transcriptase synthesis followed by insertion of the resulting cDNA clones in Lambda ZAP using a ZAP Express cDNA Synthesis Kit (Stratagene), according to the manufacturer's protocol. The resulting cDNAs were packaged using a Gigapack II Packaging Extract (Stratagene) employing 1 pl of sample DNA from the I ligation mix. Mass excision of the library was done using XLI -Blue MRF' cells and XLOLR cells (Stratagene) with ExAssist helper phage (Stratagene). The excised phagemids were diluted with NZY broth (Gibco BRL, Gaithersburg, MD) and plated out onto LB-kanamycin agar plates containing X-gal and isopropylthio-beta-galactoside
(IPTG).
Of the colonies plated and picked for DNA miniprep, 99% contained an insert suitable for sequencing. Positive colonies were cultured in NZY broth with kanamycin and cDNA was purified by means of alkaline lysis and polyethylene glycol (PEG) precipitation. Agarose gel at 1% was used to screen sequencing templates for WO 98/11205 PCT/NZ97/00112 chromosomal contamination. Dye primer sequences were prepared using a Turbo Catalyst 800 machine (Perkin Elmer/Applied Biosystems, Foster City, CA) according to the manufacturer's protocol.
DNA sequence for positive clones was obtained using an Applied Biosystems Prism 377 sequencer. cDNA clones were sequenced first from both the 5' end and, in some cases, also from the 3' end. For some clones, internal sequence was obtained using subcloned fragments. Subcloning was performed using standard procedures of restriction mapping and subcloning to pBluescript II SK+ vector.
The determined cDNA sequence was compared to known sequences in the EMBL database (release 46, March 1996) using the FASTA algorithm of February 1996 (version 2.0u4) (available on the Internet at the ftp site ftp://ftp.virginia.edu/pub/fastal). Multiple alignments of redundant sequences were used to build up reliable consensus sequences. Based on similarity to known sequences from other plant species, the isolated DNA sequence (SEQ ID NO: 1) was identified as encoding a CAD enzyme.
In further studies, using the procedure described above, cDNA sequences encoding the following Eucalyptus grandis enzymes were isolated: PAL (SEQ ID NO: 16); C4H (SEQ ID NO: 17); C3H (SEQ ID NO: 18); F5H (SEQ ID NO: 19-21); OMT (SEQ ID NO: 22-25); CCR (SEQ ID NO: 26-29); CAD (SEQ ID NO: 30); CGT (SEQ ID NO: 31-33); CBG (SEQ ID NO: 34); PNL (SEQ ID NO: 35, 36); LAC (SEQ ID NO: 37-41); and POX (SEQ ID NO: 42-44).
Example 2 Isolation and Characterization of cDNA Clones from Pinus radiata a) Isolation of cDNA clones by high through-put screening A Pinus radiata cDNA expression library was constructed from xylem and screened as described above in Example 1. DNA sequence for positive clones was obtained using forward and reverse primers on an Applied Biosystems Prism 377 sequencer and the determined sequences were compared to known sequences in the database as described above.
WO 98/11205 PCT/NZ97/00112 Based on similarity to known sequences from other plant species, the isolated DNA sequences were identified as encoding the enzymes C4H (SEQ ID NO: 2 and 3), C3H (SEQ ID NO: PNL (SEQ ID NO: OMT (SEQ ID NO: CAD (SEQ ID NO: CCR (SEQ ID NO: PAL (SEQ ID NO: 9-11) and 4CL (SEQ ID NO: 12).
In further studies, using the procedure described above, additional cDNA clones encoding the following Pinus radiata enzymes were isolated: PAL (SEQ ID NO: 47); C4H (SEQ ID NO: 48, 49); C3H (SEQ ID NO: 50-52); OMT (SEQ ID NO: 53- 4CL (SEQ ID NO: 56, 57); CCR (SEQ ID NO: 58-70); CAD (SEQ ID NO: 71); CGT (SEQ ID NO: 72); CBG (SEQ ID NO: 73-80); PNL (SEQ ID NO: 81); LAC (SEQ ID NO: 82-84); and POX (SEQ ID NO: 85-88).
b) Isolation of cDNA clones by PCR Two PCR probes, hereinafter referred to as LNB010 and LNB011 (SEQ ID NO: 14 and 15, respectively) were designed based on conserved domains in the following peroxidase sequences previously identified in other species: vanpox, hvupox6, taepox, hvupoxl, osapox, ntopox2, ntopoxl, lespox, pokpox, luspox, athpox, hrpox, spopox, and tvepox (Genbank accession nos. D11337, M83671, X56011, X58396, X66125, J02979, D11396, X71593, D11102, L07554, M58381, X57564, Z22920, and Z31011, respectively).
RNA was isolated from pine xylem and first strand cDNA was synthesized as described above. This cDNA was subjected to PCR using 4 [M LNB010, 4 CiM LNB011, 1 x Kogen's buffer, 0.1 mg/ml BSA, 200 mM dNTP, 2 mM Mg 2 and 0.1 U/l of Taq polymerase (Gibco BRL). Conditions were 2 cycles of 2 min at 94 1 min at 55 "C and 1 min at 72 25 cycles of 1 min at 94 1 min at 55 and 1 min at 72 and 18 cycles of 1 min at 94 OC, 1 min at 55 and 3 min at 72 "C in a Stratagene Robocycler. The gene was re-amplified in the same manner. A band of about 200 bp was purified from a TAE agarose gel using a Schleicher Schuell Elu- Quik DNA purification kit and clones into a T-tailed pBluescript vector (Marchuk D. et al., Nucleic Acids Res. 19:1154, 1991). Based on similarity to known sequences, the isolated gene (SEQ ID NO: 13) was identified as encoding pine peroxidase (POX).
WO 98/11205 PCT/NZ97/00112 Example 3 Use of an O-methvltransferase (OMT) Gene to Modify Lignin Biosynthesis a) Transformation of tobacco plants with a Pinus radiata OMT gene Sense and anti-sense constructs containing a sequence including the coding region of OMT (SEQ ID NO: 53) from Pinus radiata were inserted into Agrobacterium tumefaciens LBA4301 (provided as a gift by Dr. C. Kado, University of California, Davis, CA) by direct transformation using published methods (see, An G, Ebert PR, Mitra A, Ha SB: Binary Vectors. In: Gelvin SB, Schilperoort RA (eds) Plant Molecular Biology Manual, Kluwer Academic Publishers, Dordrecht (1988)). The presence and integrity of the transgenic constructs were verified by restriction digestion and DNA sequencing.
Tobacco (Nicotiana tabacum cv. Samsun) leaf sections were transformed using the method of Horsch et al. (Science, 227:1229-1231, 1985). Five independent transformed plant lines were established for the sense construct and eight independent transformed plant lines were established for the anti-sense construct for OMT.
Transformed plants containing the appropriate lignin gene construct were verified using Southern blot experiments. A in the column labeled "Southern" in Table 1 below indicates that the transformed plant lines were confirmed as independent transformed lines.
b) Expression of Pinus OMT in transformed plants Total RNA was isolated from each independent transformed plant line created with the OMT sense and anti-sense constructs. The RNA samples were analysed in Northern blot experiments to determine the level of expression of the transgene in each transformed line. The data shown in the column labeled "Northern" in Table 1 shows that the transformed plant lines containing the sense and anti-sense constructs for OMT all exhibited high levels of expression, relative to the background on the Northern blots.
OMT expression in sense plant line number 2 was not measured because the RNA sample showed signs of degradation. There was no detectable hybridisation to RNA samples from empty vector-transformed control plants.
WO 98/11205 PCT/NZ97/00112 c) Modulation of OMT enzyme activity in transformed plants The total activity of OMT enzyme, encoded by the Pinus OMT gene and by the endogenous tobacco OMT gene, in transformed tobacco plants was analysed for each transformed plant line created with the OMT sense and anti-sense constructs. Crude protein extracts were prepared from each transformed plant and assayed using the method of Zhang et al. (Plant Phvsiol., 113:65-74, 1997). The data contained in the column labeled "Enzyme" in Table 1 shows that the transformed plant lines containing the OMT sense construct generally had elevated OMT enzyme activity, with a maximum of 199%, whereas the transformed plant lines containing the OMT anti-sense construct generally had reduced OMT enzyme activity, with a minimum of relative to empty vector-transformed control plants. OMT enzyme activity was not estimated in sense plant line number 3.
d) Effects of Pinus OMT on lignin concentration in transformed plants The concentration of lignin in the transformed tobacco plants was determined using the well-established procedure of thioglycolic acid extraction (see, Freudenberg et al. in "Constitution and Biosynthesis of Lignin", Springer-Verlag, Berlin, 1968).
Briefly, whole tobacco plants, of an average age of 38 days, were frozen in liquid nitrogen and ground to a fine powder in a mortar and pestle. 100 mg of frozen powder from one empty vector-transformed control plant line, the five independent transformed plant lines containing the sense construct for OMT and the eight independent transformed plant lines containing the anti-sense construct for OMT were extracted individually with methanol, followed by 10% thioglycolic.acid and finally dissolved in 1 M NaOH. The final extracts were assayed for absorbance at 280 nm. The data shown in the column labelled "TGA" in Table 1 shows that the transformed plant lines containing the sense and the anti-sense OMT gene constructs all exhibited significantly decreased levels of lignin, relative to the empty vector-transformed control plant lines.
WO 98/11205 PCT/NZ97/00112 Table 1 olant line transwene nrientatinn S i 4 t'rn Nnrthprn Fvrn-Nm TrA A-Ar htr Irrl L -Jfllr I plant lne tra went-.nrif-nttion Suthern Nnrth -n Pn m- Try 1 1 2 4 1 2 3 4 6 7 8 control
OMT
OMT
OMT
OMT
OMT
OMT
OMT
OMT
OMT
OMT
OMT
OMT
OMT
na sense sense sense.
sense sense anti-sense anti-sense anti-sense anti-sense anti-sense anti-sense anti-sense anti-sense blank 2.9E+6 na 4.1E+6 2.3E+6 3.6E+5 1.6E+4 5.7E+3 8.0E+3 1.4E+4 2.5E+4 2.5E+4 2.5E+4 1.1E+4 These data clearly indicate that lignin concentration, as measured by the TGA assay, can be directly manipulated by either sense or anti-sense expression of a lignin biosynthetic gene such as OMT.
Example 4 Use of a 4-Coumarate:CoA ligase (4CL) Gene to Modify Lignin Biosynthesis a) Transformation of tobacco plants with a Pinus radiata 4CL gene Sense and anti-sense constructs containing a sequence including the coding region of 4CL (SEQ ID NO: 56) from Pinus radiata were inserted into Agrobacterium tumefaciens LBA4301 by direct transformation as described above. The presence and integrity of the transgenic constructs were verified by restriction digestion and DNA sequencing.
Tobacco (Nicotiana tabacum cv. Samsun) leaf sections were transformed as described above. Five independent transformed plant lines were established for the sense construct and eight independent transformed plant lines were established for the anti-sense construct for 4CL. Transformed plants containing the appropriate lignin gene construct were verified using Southern blot experiments. A in the column WO 98/11205 PCT/NZ97/00112 labeled "Southern" in Table 2 indicates that the transformed plant lines listed were confirmed as independent transformed lines.
b) Expression ofPinus 4CL in transformed plants Total RNA was isolated from each independent transformed plant line created with the 4CL sense and anti-sense constructs. The RNA samples were analysed in Northern blot experiments to determine the level of expression of the transgene in each transformed line. The data shown in the column labelled "Northern" in Table 2 below shows that the transformed plant lines containing the sense and anti-sense constructs for lo 4CL all exhibit high levels of expression, relative to the background on the Northern blots. 4CL expression in anti-sense plant line number 1 was not measured because the RNA was not available at the time of the experiment. There was no detectable hybridisation to RNA samples from empty vector-transformed control plants.
c) Modulation of 4CL enzyme activity in transformed plants The total activity of 4CL enzyme, encoded by the Pinus 4CL gene and by the endogenous tobacco 4CL gene, in transformed tobacco plants was analysed for each transformed plant line created with the 4CL sense and anti-sense constructs. Crude protein extracts were prepared from each transformed plant and assayed using the method of Zhang et al. (Plant Physiol., 113:65-74, 1997). The data contained in the column labeled "Enzyme" in Table 2 shows that the transformed plant lines containing the 4CL sense construct had elevated 4CL enzyme activity, with a maximum of 258%, and the transformed plant lines containing the 4CL anti-sense construct had reduced 4CL enzyme activity, with a minimum of 59%, relative to empty vector-transformed control plants.
d) Effects of Pinus 4CL on lignin concentration in transformed plants The concentration of lignin in samples of transformed plant material was determined as described in Example 3. The data shown in the column labelled "TGA" in Table 2 shows that the transformed plant lines containing the sense and the antisense 4CL gene constructs all exhibited significantly decreased levels of lignin, relative to the empty vector-transformed control plant lines. These data clearly indicate that WO 98/11205 PCT/NZ97/00112 lignin concentration, as measured by the TGA assay, can be directly manipulated by either sense or anti-sense expression of a lignin biosynthetic gene such as 4CL.
Table 2 plant line transeene orientation Southern Northern Enzyme TGA Northern En7vme T A 1 2 1 2 3 4 5 1 2 3 4 5 6 7 8 control control 4CL 4CL 4CL 4CL 4CL 4CL 4CL 4CL 4CL 4CL 4CL 4CL 4CL na na sense sense sense sense sense anti-sense anti-sense anti-sense anti-sense anti-sense anti-sense anti-sense anti-sense blank blank 2.3E+4 4.5E+4 3.1E+4 1.7E+4 1.6E+4 na 1.0E+4 9.6E+3 1.2E+4 4.7E+3 3.9E+3 1.8E+3 1.7E+4 100 100 169 258 174 164 184 59 81 101 116 125 106 Example Transformation of Tobacco using the Inventive Lignin Biosynthetic Genes Sense and anti-sense constructs containing sequences including the coding regions of C3H (SEQ ID NO: 18), F5H (SEQ ID NO: 19), CCR (SEQ ID NO: 25) and CGT (SEQ ID NO: 31) from Eucalyptus grandis, and PAL (SEQ ID NO: 45 and 47), C4H (SEQ ID NO: 48 and 49), PNL (SEQ ID NO: 81) and LAC (SEQ ID NO: 83) from Pinus radiata were inserted into Agrobacterium tumefaciens LBA4301 by direct transformation as described above. The presence and integrity of the transgenic constructs were verified by restriction digestion and DNA sequencing.
Tobacco (Nicotiana tabacum cv. Samsun) leaf sections were transformed as described in Example 3. Up to twelve independent transformed plant lines were established for each sense construct and each anti-sense construct listed in the preceding paragraph. Transformed plants containing the appropriate lignin gene WO 98/11205 PCT/NZ97/00112 construct were verified using Southern blot experiments. All of the transformed plant lines analysed were confirmed as independent transformed lines.
Example 6 Manipulation of Lignin Content in Transformed Plants a) Determination of transgene expression by Northern blot experiments Total RNA was isolated from each independent transformed plant line described in Example 5. The RNA samples were analysed in Northern blot experiments to determine the level of expression of the transgene in each transformed line. The column labelled "Northern" in Table 3 shows the level of transgene expression for all plant lines assayed, relative to the background on the Northern blots. There was no detectable hybridisation to RNA samples from empty vector-transformed control plants.
b) Determination of lignin concentration in transformed plants The concentration of lignin in empty vector-transformed control plant lines and in up to twelve independent transformed lines for each sense construct and each anti-sense construct described in Example 5 was determined as described in Example 3. The column labelled "TGA" in Table 3 shows the thioglycolic acid extractable lignins for all plant lines assayed, expressed as the average percentage of TGA extractable lignins in transformed plants versus control plants. The range of variation is shown in parentheses.
WO 98/11205 PCT/NZ97/00112 Table 3 transgene orientation no. of lines Northern TGA control na 3 blank 100 (92-104) C3H sense 5 3.7E+4 74 (67-85) sense 10 5.8E+4 70 (63-79) anti-sense 9 5.8E+4 73 (35-93) CCR sense 1 na 74 CCR anti-sense 2 na 74 (62-86) PAL sense 5 1.9E+5 77 (71-86) PAL anti-sense 4 1.5E+4 62 (37-77) C4H anti-sense 10 5.8E+4 86 (52-113) PNL anti-sense 6 1.2E+4 88 (70-114) LAC sense 5 1.7E+5 na LAC anti-sense 12 1.7E+5 88 (73-114) Transformed plant lines containing the sense and the anti-sense lignin biosynthetic gene constructs all exhibited significantly decreased levels of lignin, relative to the empty vector-transformed control plant lines. The most dramatic effects on lignin concentration were seen in the F5H anti-sense plants with as little as 35% of the amount of lignin in control plants, and in the PAL anti-sense plants with as little as 37% of the amount of lignin in control plants. These data clearly indicate that lignin concentration, as measured by the TGA assay, can be directly manipulated by conventional anti-sense methodology and also by sense over-expression using the inventive lignin biosynthetic genes.
Example 7 Modulation of Lignin Enzyme Activity in Transformed Plants The activities and substrate specificities of selected lignin biosynthetic enzymes were assayed in crude extracts from transformed tobacco plants containing sense and anti-sense constructs for PAL (SEQ ID NO: 45), PNL (SEQ ID NO: 81) and LAC (SEQ ID NO: 83) from Pinus radiata, and CGT (SEQ ID NO: 31) from Eucalyptus grandis.
Enzyme assays were performed using published methods for PAL (Southerton, S.G. and Deverall, Plant Path. 39:223-230, 1990), CGT (Vellekoop, P. et al., FEBS, 330:36-40, 1993), PNL (Espin, C.J. et al., Phvtochemistrv, 44:17-22, 1997) and WO 98/11205 PCT/NZ97/00112 LAC (Bao, W. et al., Science, 260:672-674, 1993). The data shown in the column labelled "Enzyme" in Table 4 shows the average enzyme activity from replicate measures for all plant lines assayed, expressed as a percent of enzyme activity in empty vector-transformed control plants. The range of variation is shown in parentheses.
Table 4 transgene orientation no. of lines Enzyme control na 3 100 PAL sense 5 87 (60-124) PAL anti-sense 3 53 (38-80) CGT anti-sense 1 89 PNL anti-sense 6 144 (41-279) LAC sense 5 78 (16-240) LAC anti-sense 11 64 (14-106) All of the transformed plant lines, except the PNL anti-sense transformed plant lines, showed average lignin enzyme activities which were significantly lower than the activities observed in empty vector-transformed control plants. The most dramatic effects on lignin enzyme activities were seen in the PAL anti-sense transformed plant lines in which all of the lines showed reduced PAL activity and in the LAC anti-sense transformed plant lines which showed as little as 14% of the LAC activity in empty vector-transformed control plant lines.
Example 8 Functional Identification of Lignin Biosynthetic Genes Sense constructs containing sequences including the coding regions for PAL (SEQ ID NO: 47), OMT (SEQ ID NO: 53), 4CL (SEQ ID NO: 56 and 57) and POX (SEQ ID NO: 86) from Pinus radiata, and OMT (SEQ ID NO: 23 and 24), CCR (SEQ ID NO: 26-28), CGT (SEQ ID NO: 31 and 33) and POX (SEQ ID NO: 42 and 44) from Eucalyptus grandis were inserted into the commercially available protein expression vector, pProEX-1 (Gibco BRL). The resultant constructs were transformed into E. coli XL1-Blue (Stratagene), which were then induced to produce recombinant protein by the addition of IPTG. Purified proteins were produced for the Pinus OMT and 4CL constructs and the Eucalyptus OMT and POX constructs using Ni column 24 WO 98/11205 PCT/NZ97/00112 chromatography (Janknecht, R. et al., Proc. Natl. Acad. Sci., 88:8972-8976, 1991).
Enzyme assays for each of the purified proteins conclusively demonstrated the expected substrate specificity and enzymatic activity for the genes tested.
The data for two representative enzyme assay experiments, demonstrating the verification of the enzymatic activity of a Pinus radiata 4CL gene (SEQ ID NO: 56) and a Pinus radiata OMT gene (SEQ ID NO: 53), are shown in Table 5. For the 4CL enzyme, one unit equals the quantity of protein required to convert the substrate into product at the rate of 0.1 absorbance units per minute. For the OMT enzyme, one unit equals the quantity of protein required to convert 1 pmole of substrate to product per minute.
Table purification total ml total mg total units yield fold transgene step extract protein activity activity purification 4CL crude 10ml 51 mg 4200 100 1 Ni column 4 ml 0.84 mg 3680 88 53 OMT crude 10 ml 74 mg 4600 100 1 Ni column 4 ml 1.2 mg 4487 98 The data shown in Table 5 indicate that both the purified 4CL enzyme and the purified OMT enzyme show high activity in enzyme assays, confirming the identification of the 4CL and OMT genes described in this application. Crude protein preparations from E. coli transformed with empty vector show no activity in either the 4CL or the OMT enzyme assay.
Although the present invention has been described in some detail by way of illustration and example for purposes of clarity of understanding, changes and modifications can be carried out without departing from the scope of the invention which is intended to be limited only by the scope of the appended claims.
,.r WO 98/11205 PCT/NZ97/00112 SEQUENCE LISTING GENERAL INFORMATION APPLICANT: Genesis Research and Development Corp. Ltd.
(ii) TITLE OF THE INVENTION: MATERIALS AND METHODS FOR THE MODIFICATION OF PLANT LIGNIN CONTENT (iii) NUMBER OF SEQUENCES: 88 (iv) CORRESPONDENCE
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NAME: Bennett, Michael Roy REGISTRATION NUMBER: REFERENCE/DOCKET NUMBER: 22315\MRB (ix) TELECOMMUNICATION
INFORMATION:
TELEPHONE: +64 4 495 7740 TELEFAX: +64 4 499 9306
TELEX:
INFORMATION FOR SEQ ID NO:1: SEQUENCE CHARACTERISTICS: LENGTH: 535 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: SEQ ID NO:1: CTTCGCGCTA CCGCATACTC CACCACCGCG TGCAGAAGAT GAGCTCGGAG GGTGGGAAGG AGGATTGCCT CGGTTGGGCT GCCCGGGACC CTTCTGGGTT CCTCTCCCCN TACAAATTCA 120 CCCGCAGGCC GTGGGAAGCG AAGACGTCTC GATTAAGATC ACGCACTGTG GAGTGTGCTA 180 CGCAGATGTG GCTTGGACTA GGAATGTGCA GGGACACTCC AAGTATCCTC TGGTGCCGGG 240 WO 98/11205 WO 9811205PCT/NZ97/001 12 GCACGAGATA GTTGGAATTG TGAAACAGGT TGGCTCCAGT GTCCAACGCT TCAAAGTTGG 300 CGATCATGTG GGGGTGGGAA CTTATGTCAA TTCATGCAGA GAGTGCGAGT ATTGCAATGA 360 CAGGCTAGAA GTCCAATGTG AAAAGTCGGT TATGACTTTT GATGGAATTG ATGCAGATGG 420 TACAGTGACA AAGGGAGGAT ATTCTAGTCA CATTGTCGTC CATGAAAGGT ATTGCGTCAG 480 GATTCCAGAA AACTACCCGA TGGATCTAGC AGCGCATTGC TCTGTGCTGG ATCAC 535 INFORMATION FOR SEQ ID NO:2: SEQUENCE CHARACTERISTICS: LENGTH: 671 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
GCGCCTGCAG
TGATTTGAAT
120
CAAGATGGGC
180
GCACACCCAG
240
GGGCAAGGGG
300
GATCATGACT
360
AGACGAGATC
420
CATTGTCATC
480
GACAGGAGAT
540
GAGCGAAGTC
600
AGGCCCTTCC
660
CTTTTCAAGG
671 SEQUENCE DESCRIPTION: SEQ ID NO:2: GTCGACACTA GTGGATCCAA AGAATTCGGC
CACAGAAACC
CAGAGGAATC
GGCGTCGAGT
CAGGACATGG
GTGCCTTTCT
AGCCGCGTGG
CGTAGCGCCT
TCGAATCCGA
GATTGGCCCA
TCAGAGGTTA
TCAGCGATTT
TTGTGGTAGT
TTGGGTCTCG
TGTTCACCGT
TTACGAATAA
TCGCGGATGT
CCAGCTCATG
GGACGACCCG
GAGCTTTGAG
TCACAGAATC
TGCCAAGAAA
TTCATCTCCC
AACCCGGAAC
CTATGGAGAT
AGTTGTCCAG
GAAATCCCGC
ATGTATAATA
CTTTTCCTCA
TACAAT TAT G
TGCAATGAGA
ACGAGGTTGC
TATGGCAAAA
GATCTCGCCA
GTGGTGTTCG
CACTGGAGAA
CACTACAGAT
GCCGAGTCTT
TTATGTATAG
AGCTCAAGGC
GGGATTTCAT
TTAAAGAGAA
AGGTCGGGGA
TCTTTCTGCT
AGGAGGTCCT
ATATCTTCAC
AGATGCGCAG
TCGCGTGGGA
CCACCTCGGG
GATGATGTTC
CCTCAACGGA
TCCCAGTCTT
ACGGCTCTCT
INFORMATION FOR SEQ ID NO:3: SEQUENCE CHARACTERISTICS: LENGTH: 940 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: CTTCAGGACA AGGGAGAGAT CAATGAGGAT GTTGCAGCAA TTGAGACAAC GCTGTGGTCG 120 CACCAGGACA TTCAGAGCAA GGTGCGCGCA 180 CAGATAACGG AACCAGACAC GACAAGGTTG 240 SEQ ID NO:3: AATGTTTTGT ACATCGTTGA GAACATCAAC ATGGAATGGG GAATAGCGGA GCTGGTGAAC GAGCTGGACG CTGTTCTTGG ACCAGGCGTG CCCTACCTTC AGGCGGTTGT GAAGGAAACC WO 98/11205 WO 98/ 1205PCT/NZ97/00112 CT TCGTCT CC 300
CTCGGGGGCT
360
AACAACCCCG
420
GAGAAGCACA
480
AGGAGCTGCC
540
TTCAGAACTT
600
GCGGGCAATT
660
CTGCTTAATC
720
CTCCATCTAT
780
CTTCAAAAGT
840
AAGTTTGCAT
900
ATTTTACTGC
940
GCATGGCGAT
ACGATATTCC
CCAACTGGAA
CCGAAGCCAA
CGGGAATCAT
CCACCTTCTG
CAGCCTTCAC
CCAACTTGTC
CATGACTGTG
TTGCTAGGAT
AAATTAAATG
TAAAAAAAAA
CCCGTTGCTC
GGCAGAGAGC
GAACCCCGAG
TGGCAACGAC
TCTGGCGCTG
CCGCCGCCCG
ATTCTCAACC
AGTGACTGGT
TGTGCGTGTC
TTCAATAACA
ATATTTCAAT
GTCCCCCACA
AAGATCCTGG
GAG TT C CCCC
TTCAAATTCC
CTCTCCTCGC
GGCAGAGCAA
ATTCTCTCAT
ATATAAATGC
CACTGTCGAG
GACACCGTCA
ATACTATTTT
AAAAAAAA
TGAATCTCCA
TGAACGCCTG
CCGAGCGGTT
TGNCCTTCGG
ACTCTCCATC
AGTGGATGTC
CGTCGCCAAG
GCGCACCTGA
TCTACTAAGA
ATTATGTCAT
GACTCTCCAC
CGACGCCAAG
GTGGTTGGCC
CTTCGAGGAG
TGTGGGGAGG
GGAAGACTTG
ACTGAGAAGG
CCCATAGCTT
ACAAAAAACA
GCTCATAGCA
GTTTCAATAA
CAATTGGGGA
INFORMATION FOR SEQ ID NO:4: SEQUENCE CHARACTERISTICS: LENGTH: 949 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
NNGCTCNACC
CAGGCAATTC
120
CTCGTATGTT
180
ATGATTACGC
240
GCGGTGGCGG
300
TTCAGGCCTG
360
CTGCCATTGG
420
AGTCTATGTT
480
CAGAAGACAT
540
AGGCCATTGC
600
CAATTGATCT
660
TCTCCTTTTC
720
TCTGAAGCCC
780
AAATTGAGWA
840
TANTTTAGGG
900 SEQUENCE DESCRIPTION: SEQ ID NO:4: GACGGTGGAC GGTCCGCTAC
GATTTAGCTC
GTGTGGAATT
CAAGCGCGCA
CCGCTCTAGA
AGAGATTTCT
TGCAGGGCGC
GGGACACCTG
AGATCTCACA
TATTCCTCGA
GATAGTAAGT
CATAGTCAAC
AACTTCTAGC
ACTCATTAGG
CT GAGCG CAT
ATTAACCCTC
ACTAGTGGAT
TGAGGAAGAT
AGGATCTGCC
CTTCATCATT
GAGAATCCAG
TTGCCTGATC
TTGAATTTTG
ATGCAGCTTT
AAGCAATAAC
TCAGTAACTG
CACCCCAGGC
AACAATTTCA
ACTAAAGGGA
CCAAAGAATT
GTTGATATTA
CTGGTGCACA
TCGTATGGGC
GGCTTGTTAC
ATCTCTACAA
TTTTGATACA
CTTTCTCTGA
TGTATATTTT
ATTGTGCAAT
ANANGNGGNA
AGTGGGATCC
TTTACACTTT
CACAGGAAAC
ACAAAAGCTC.
CGGCACGAGA
AGGCCCATGA
ATTGGGTATT
ACCTCCTGAG
TTTCATGGCC
GCGACAGCCA
AAACGAAATA
AGCGCATGCA
AGAACAAATA
TTGCAAGNAA
ATGNTAGNGG
CCCGGGCTGA
ATGCTTCCGG
AGCTATGACC
GAGCTCCACC
CCCAGTGACC
TTACAGGCTA
AATTTAGTTC
GGAATGAAGG
AAGCCTGTGC
CTCAATTGAT
ACGTGCAGTT
GCTTTCTTTC
CCTATTCCTC
TAGTAAAGTT
GCATTNAGAA
TTTCTCTGTA GGGGNNGNTA NATTTTAATA GTCCTANGTA WO 98/11205 WO 9811205PCT/NZ97/O01 12 ANCCCTAATA GNTGTTGGNG GNNGNTAGGN TTTTTNACCA AAAAAAAAA 949 INFORMATION FOR SEQ ID SEQUENCE CHARACTERISTICS: LENGTH: 959 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: SEQ ID GAATTCGGCA CGAGAAAGCC CTAGAATTTT
CTTTAACTGC
120
CTGGTCAGGT
180
CTTGCACTCA
240
TGGAAGCTTG
300
TCAAGCAAGT
360
TGACCCTCTC
420
AACTCCATGT
480
ATGGGATGGT
540
ATATAGATAC
600
AGCAGATTTC
660
ACATAGATGA
720
TCATCTTCAA
780
TAGTACTGTG
840
AAAATCTCAA
900
TGACATTTGA
959
AATAACTGTG
TCCAGCATTT
GCCCTACATT
TGTCAACACG
T TTCT CAT CT
TCTTCAAGAC
TCTGCAGATG
GAGCTTCAAT
TGCAATTCGG
GTGTGATCAT
TTTTGATACT
GACTCGCTTA
GCTGAGTCCA
ATTTCTCGAT
GCACCTCGAG
GAAGCGTACA
CCAAAATACA
GATTTAGCAA
AACACAGAGA
CTTTATAAAC
ATAGCAAGTA
ATTCAAGATG
GAGGATCCTG
AGAATCATGG
TCCTACCTGA
GTTCCCCAGA
TATTCATTAC
GAAAGGATCT
GTCTAGTCTT
TGAACTACAA
TTCAGCATGC
AAAAGTTTGT
CACCTGCTGT
ACAACTACAG
AGTTCAAGAA
GGAATATTCA
CGGTACAGTT
GTGAGATTTT
AACAGTACAA
CACTATCAAA
GTAAGGTGGG
AGTTCANAAA
TTTCTATGTG
CTCGGTATTA
GATTTTGATT
AGTTGCATGT
TATCACAGCC
CCTAGTTTCT
TGTCCAAAGA
TAGTGGGAAA
TGATAGTAAT
GAGATTGACA
GGAGACTGCT
TGCAACCATA
AACATGTCAG
GAAGCTCACC
GAGAGAGCGT
TATGTAACAA
AATTGATAGT
TCACTTGACA
ATGAATGCGA
TAAAAAAAAA
CCAGCGACAA
CTCATTCAGA
AATTTGAAAT
ATTTCTGTAT
TTGGGGTTAG
CAGACATATC
AAGCAGGCTG
AATCAGAAAG
ATGACTGAAT
ACAGTAGATG
TCAAGATTTG
ATGATGTAAA
CTGTTAACAA
TGCCATCAAA
CTTTTAGTTG
INFORMATION FOR SEQ ID NO:6: SEQUENCE CHARACTERISTICS: LENGTH: 1026 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: GAATTCGGCA CGAGCTTTGA GGCAACCTAC CAAACAGGTT TAAGGAAATG GCAGGCACA 120 CAACCCAAGC AGAGGAGCCG GTTAAGGTTG 180 TTTTGCAGAG CGATGCCCTC TATCAGTATA 240 SEQ ID NO:6: ATTCATTGAA TCCCAGGATT TCTTCTTGTC GTGTTGCTGC AGCAGAGGTG AAGGCTCAGA TCCGCCATCA AGAAGTGGGA CACAAAAGTC TATTGGAAAC GAGCGTGTAC CCTCGTGAGC WO 98/11205
CCGAGCCAAT
300
CTTCTGCCGA
360
CCATGGAGAT
420
ATGATGGAAA
480
TTATTGAGAA
540
TTCTGGACGA
600
ATGCGGACAA
660
GAGGTCTGAT
720
CTCCCCTGAG
780
TTGCTGTCGA
840
GCAGGCGTGT
900
CTCTGATTAT
960
TATTGATAAT
1020 1026
GAAGGAGCTC
TGAGGGTCAA
TGGGGTGTAC
GATTCTAGCC
AGCAGGAGTT
ACTGCTTAAG
AGACAACTAT
TGCATATGAC
GAAATATGTG
TCCCCGCATT
CTATTGAAAA
AAGGAGAACG
AAAGTAGTAC
CGCGAAGTGA
TTTCTGGGCC
ACTGGTTACT
ATGGACATCA
GCCCACAAGA
AATGAGGACA
CTAAACTACC
AACACCCTGT
AGATATTACA
GAGATCAGCC
CAATCCTTGT'
CTATAATATA
AGCATATGCA
CTGCCAAGCA
TCCTGCTGAA
CGCTTCTCAG
ACAGAGAGAA
TTGACTTCAG
TGCATGGATC
ACAAGCGTCT
GGAACGGATC
GAGATTTCGT
AAATCCCAGT'
TTCTGCTCGT
TGGGGTTGAA
AAGTTTGTAT
TCCCTGGAAC
GCTCATTAAC
CACAGCCCTT
CTATGATATC
AGAGGGCCCT
GTT CGATTTT
GATCGATCTG
TGTGGTGGCT
GATGGAGCTA
CGGTGACGGC
CTATTGCAAG
GCCATTTGTT
CAAAAAAAAA
PCT/NZ97/00112
CTCATGACTA
GCCAAGAACA
GCATTGCCCG
GGATTGCCTA
GCTCTGCCAG
GTGTTCGTGG
GTGAAGGTTG
CCACCCGATG
AACAAGGCCC
GTCACCCTTT
CATAAAGGCT
TTGTTTAGTG
AAAMAA
INFORMATION FOR SEQ ID NO:7: SEQUENCE CHARACTERISTICS: LENGTH: 1454 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: SEQ ID NO:7: GAATTCGGCA CGAGGCCAAC TGCAAGCAAT
TGAAGTGGTT
120
GCTCGGGACT
180
GAGGATGTAA
240
CGTAATGAAA
300
GTAACAGAGA
360
TGCATTGTTG
420
AGCAAGAGGA
480
TTTGCAAGCA
540
CTGGAACAAG
600
TTCGCCATGA
660
ATGGGTGTCA
720
AAAAAGAAAG
780
CTGAAGTGAT
CCAGTGGCCA
TTGTAAAGGT
TGGACATGTC
TTGGCAGCGA
GGTCCTGTCG
TTTGGACCTA
GTATGGTGGT
CGGCCCCTCT
CAGAGCCCGG
AGATTGCCAA
AAGAAGCCAT
GGGAAGCTTG
CTTGTCCCCT
CATTTACTGC
TCATTACCCA
GGTGAAGAAA
CAGTTGCGGT
CAATGATGTG
TGATCAGATG
GTTATGTGCA
GAAGAAATGT
AGCCTTTGGA
GGAAGTCCTC
ACAGTACAAG
GAATCTGAAA.
TACACTTACA
GGAATCTGCC
ATGGTCCCTG
TTCAAAGTGG
AATTGCAATC
AACCATGACG
TWTGTGGTTC
GGGTTACAG
GGGATTTTGG
CTCCACGTGA
GGCGCCGATG
AGCCAGACGA
AAACTGTTAC
ATCTCAGAAA
ACTCTGATTT
GGCATGAAGT
GAGAGCATGT
AGAGCATGGA
GCACACCTAC
GAATCCCGGA
TTTTCAGCCC
GTTTAGGAGG
CGGTTATCAG
CTTATCTTGT
TCGAATCCTG
AGGATATGCA
GAAAGGACCT
AGTTCAAATG
GGTGGGGATT
AGGGGTTGGT
ACAATACTGC
TCAGGGCGGA
GAATCTTCCT
AATGAAGCAT
CGTGGGGCAC
TTCGTCTGAT
TAGCAAGGAT
WO 98/11205 WO 9811205PCT/NZ97/001 12 ACT GAAAAGA 840
GCTCATCCTC
900
GGCGTTGTTC
960
ATAGCTGGAA
1020
GAGAAGAAGG
1080
GAAAGGTTGG
1140
TTGGATAATT
1200
CTGGACTAGT
1260
TTTTTGTTAC
1320
GTATATGTAA
1380
TAATATATGT
1454 AAAAAA 1454
TGATGGAAGC
TGGAACCATA
CAGAGTCGTT
GTTTCATTGG
TATCATCGAT
AGAAGAACGA
AGTCTGCAAT
AGCTTAACAT
TTTAGTTTAG
AGATCAATTT
ATTCGTATTT
AGCAGAGAGC
TCTTGCCCTT
GCACTTCGTG
CAGCATGGAG
GATTGAGGTT
TGTCCGTTAC
CAATCAATCA
GAAAGGGAAA
CTTTTGTGAG
CTCGTGACAG'
CTAGATTACA
CTGAAGACAA
ACTCCTCTCT
GAAACACAGG
GTGGGCCTGG
AGATTTGTGG
GATCAATGCC
TTAAATTTTT
GTTGAAACAA
TAAATAATAA
TAATGGACAC
ATGGAAAGCT
TAATACTTGG
AAACTCTAGA
ACTACATCAA
TGGATGTTGC
TGCATGCAAG
ATTTAGGAAC
TTCAGATGTT
TCCAATGTCT
CATTCCAGTT
AGTGATGCTG
GAGAAGGAGC
TTTCTGTGCA
CACGGCCATG
TAGAAGCAAG
ATGAATAGAT
TCGATACTGG
TTTT TAACTT
TCTGCCAAAT
TTATATGAAA.AAAAAA AAAA 1440 AAAAAA AAA INFORMATION FOR SEQ ID NO:8: SEQUENCE CHARACTERISTICS: LENGTH: 740 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: SEQ ID NO:8: GAATTCGGCA CGAGACCATT TCCAGCTAAT ATTGGCATAG CAATTGGTCA TTCTATCTTT
GTCAAAGGAG
120
TACCCAGATG
180
CGAGATTCTC
240
GCATTTGCCA
300
TTTAGTATAG
360
AACAAATACT
420
TCTTTGGAAA
480
CCAAAATCAT
540
CAGTGAATAA
600
GTGTTAGTGA
660
ATCAAACAAA
TGAAATATAC
TTCCACATGC
AATTGTGGGT
TATGACGAGC
CACCTGTGGT
CCGCTTAGTG
GGCTGATGTG
TTTTGTTAGA
ACGGAATGAT
TTTTGAAATT
CACTGTCGAT
TTCAGAGATA
TATAATCCTT
TAGGCACTGC
TTGTTTTCTT
TGGAATGCTA
AACTGGTTGT
GTGTTTAGAT
GTCAAATCTT
GGACCTAATG
GAGTACCTCA
CATAACAGTT
CGTAGGTGTT
AGATCCTTCA
TCTTTCTGGA
AGTACTAGTG
TCCAGAGGGT
CCATCTTTAC
GATGGGCTGA
TAAA.AAAAAA
GTGTGGAGGC
GCAAATTTGT
TCAATCAATG
TGGCAGAACA
CACTTTTCTC
ACTTTGGTAT
TCCAGAGTTC
GTTTACAACC
AAGGCTATTG
CTGACTCTCT
AAAAAA
TAGtCAGCTA
GTGAAGTATG
TTTGTCCTAG
GAACCTCCTG
TTCCATAAGA
GGCAATAATG
TAAGGGAGTT
AACAGTTGTT
AGTAAGGTTG
TGTGATGTCA
AATCTTGATG GATTGTGTCT TTTTCAATGG 740 720 AAAAAAAA 740 INFORMATION FOR SEQ ID NO:9: SEQUENCE CHARACTERISTICS: LENGTH: 624 base pairs TYPE: nucleic acid WO 98/11205 PCT/NZ97/00112 STRANDEDNESS: single TOPOLOGY: linear (xi)
GAATTCCTGC
GCGCGCCTGC
120
TTGTTGGACG
180
CCCAAGGAAG
240
GTCTGTGTTG
300
GAGGTGATGC
360
CCAGGGCAGA
420
AAAGAAGCAG
480
GCTCTGCGAA
540
CACTCCATCG
600
GACATGGCTG
624 SEQUENCE DESCRIPTION: SEQ ID NO:9: AGCCCGGGGG ATCCACTAGT TCTAGAGCGG CCGCCACCGC
AGGTCGACAC
CCATGGAAGC
GACTGGCTCT
ACGCCAACGT
AAGGGAAACC
TCGAAGCCGC
CGCGGCTTCA
CATCGCCACA
AGCGGGAGAT
TCCACGGCGG
TAGTGGATCC
TCTCCGGAAA
CGTCAACGGC
GCTGGGCGTG
GGAGTTCGTA
GGCCGTCATG.
CGAGAAAGAC.
GTGGTTGGGG
CAATTCCGTC
CAAC
AAAGAATTCG
GCCGGGATTC
ACAGCGGTGG
CTGGCTGAGA
GATCCGTTAA
GAGTTCCTCC
CCGTTGAGCA
CCTCCGATCG
AACGACAATC
GCACGAGGCC
TGGAACCGTT
GATCCGCCGT
TTCTGTCTGC
CCCACCAGTT
TCGACGGTAG
AACCGAAACA
AAGTCATCCG
CGTTAATCGA
GGTGGAGCTC
CGACGGCCAC
TAAACTGCAG
GGCCGCGTCC
GCTCTTCTGC
GAAGCACCAC
CGACTACGTG
AGACCGCTAC
CGCTGCYACT
TGTCTCCAGG
INFORMATION FOR SEQ ID Ci) SEQUENCE CHARACTERISTICS: LENGTH: 278 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
GAATTCCTGC
CAGTACCTGG
120
GTCAATTCCC
180
CTGATGTTCG
240
,GAAAACATGC
278 SEQUENCE DESCRIPTION: SEQ ID AGCCCGGGGG ATCCACTAGT TCTAGAGCGG CCGCCACCGC GGTGGAGCTC CCAACCCCGT CACGACTCAC GTCCAGAGCG CCGAACAACA.CAACCAGGAT TCGGCTTGAT CTCCGCCAGA AAGACTGCCG AGGCCGTTGA GATTTTAAAG CTACATATCT GGTGGCCTTA TGCCAGGCGA TCGATCTCCG GCACCTGGAA GATCCGTTGT GAAGCACGTA GTCTTGCA INFORMATION FOR SEQ ID NO:11: SEQUENCE CHARACTERISTICS: LENGTH: 765 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: GAGCTCCTGC AAGTCATCGA TCATCAGCCC CCATCATACG CGCTTATGCT CCAACTCAGA 120 SEQ ID NO:l1: GTTTTCTCGT ACATCGACGA TCCCACAAAT GAAGTGCTCG TAGATGAGGC TCTCAAATCA WO 98/11205
TCTTGCCCAG
180
GCTGCTGGAA
240
AAGGCCCGTT
300
CCAATTGCAA
360
GAGTTGGGAA
420
AAGGTATTTG
480
GCTTGGGGTG
540
TTCAATGCCT
600
AGAGGTTTCT
660
CCTAAACAGC
720
GGGTTCCAAC
765
ACGGGAATGA
TATTACCCAA
TAGAGGAAGA
ACAGAATAAA
CCGATTTGCT
AGGGCATTTG
GGTGCGCTGG
CATATTGGGC
GGAGCGCCCA
TTGTTCTTCG
AAAATAGAAG
CGAATCCGAT
TTGGGTGTTT
GGTTCCGAAG
CAAGTGCAGG
AACAGGGCCC
CCAAGGGAAA
ACCATTCACT
ATGGTTTGAT
ACAACAACAA
CAATAACGAA
AAATATTTTC
CACAATTTGC
AGCAGGATCC
GCGAGGGAAC
ACATATCCCA
AAGTGGAGAA
ATTGGAAACG
CCACGTGCAT
AGCACCAAAT
GTTCTTTGAT
TCTTTCATCT
GATCCAAAAA
AGCCCGCTGA
CCATATTTCA
GATTCGATAA
TTTACAGATT
GCCCCGGCGA
TGATCCTCAA
AT CCT GCG TC
CACCCTCTGC
TTAACTGACT
TCGTTACTTT
PCTINZ97/001 12
GAGCGCTGGA
AGAGGAGTTG
TGGGGACTTC
CGTGAGATCA
AGATATAGAA
ATGTCTGGAC
TICCTGCAGCG
AACGAGCGGC
CTTAAGCATT
GTAAAAGATG
INFORMATION FOR SEQ ID NO:12: SEQUENCE CHARACTERISTICS: LENGTH: 453 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
TGATTATGCG
TGAACCTAGC
120
TCCGGAACGC
180
CAAGCCGGCG
240
GAATCCACGG
300
ATTGACGATG
360
GCTTCCAGGT
420
CGGCCGCCAC
453 SEQUENCE DESCRI PT ION: GATCCTTGGG CAGGGATACG CTTCGCAAAG AATCCTTTCC TCAAATAAAG ATCCTCGATT AAATCTGCAT CCGCGGACCC CCGCTACAAT CGATGAAGAA ACGAAGAAAT CTTCATAGTC.
GGATCCTGCT AATCGAATTC CGCGGTGGAG CTCCAGCTTT SEQ ID NO:12: GCATGACAGA AGCAGGCCCG CCGCCAAATC TGGCTCCTGC ACAGGAACTG GCGAGTCTCT GAAATAATGA AAGGATATAT GGCTGGCTCC ACACAGGCGA GACAGAGTAA. AGGAGATTAT CTGCAGCCCG GGGGTCCACT
TGT
GTGCTGGCAA
GGAACAGTCG
CCCGCACAAT
TAACGACCCG
CGTCGGGTAC
CAATATAAAG
AGTTCTAGAG
INFORMATION FOR SEQ ID NO:13: SEQUENCE CHARACTERISTICS: LENGTH: 278 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: SEQ ID NO:13: TCTTCGAATT CTCTTTCACG ACTGCTTCGT TAATGGCTGC GATGGCTCGA TATTGTTAGA TGATAACTCA ACGTTCACCG GAGAAAAGAC TGCAGGCCCA AATGTTAATT CTGCGAGAGG 120 WO 98/11205 PCT/NZ97/00112 ATTCGACGTA ATAGACACCA TCAAAACTCA AGTTGAGGCA GCCTGCAGTG GTGTCGTGTC 180 AGTTGCCGAC ATTCTCGCCA TTGCTGCACG CGATTCAGTC GTCCAACTGG GGGGCCCAAC 240 ATGGACGGTA CTTCTGGGAG AAAAGACGGA TCCGATCA 278 INFORMATION FOR SEQ ID NO:14: SEQUENCE CHARACTERISTICS: LENGTH: 23 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: SEQ ID NO:14: CTTCGAATTC WYTTYCAYGA YTG 23 INFORMATION FOR SEQ ID SEQUENCE CHARACTERISTICS: LENGTH: 22 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: SEQ ID GATCGGATCC RTCYYKYCTY CC 22 INFORMATION FOR SEQ ID NO:16: SEQUENCE CHARACTERISTICS: LENGTH: 472 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: SEQ ID NO:16: AATTCGGCAC GAGACGACCT CTTGTATCGG ACCCGGATCC GCTATCGTTA ACGTACACAC
GTTCTAGTGC
120
CTGCGCCGCC
180
CACAGGGAGC
240
GCGCCTCGGC
300
GGTAGGGGTC
360
CATGGAGAGC
420
CTTCTCAAAC
472
TGAATGGAGA
GGGAGCCACC
CACCTCGACG
GGGGAGTCCC
GAGCTCTCGG
ATGAACAAGG
CGGAGGCCGA
TGGAGAGCAC
ATGCCGACCC
AGGTGAAGCG
TCACGATAGC
AGGCGGCCCG
GAACTGACAG
AGCAAGGCGG
CACCGGCACC
ACTGAACTGG
GATGGTCGAG
CCAGGTGGCG
TCCCAGGGTC
CTACGGGGTC
TCCTTTTCAG
GGCAACGGCC
GGGGCGGCGG
GAGTACCGGA
GCGGTGGCGA
AAGGCCAGCA
ACCACCGGGT
AAGGAACTTA
TTCACAGCCT
CAGCAGCCCT
GGCCGGCGGT
GTCAGGAGGG
GCGACTGGGT
TCGGCGGCAA
TA
INFORMATION FOR SEQ ID NO:17: SEQUENCE CHARACTERISTICS: WO 98/11205 PCT/NZ97/00112 LENGTH: 622 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: SEQ ID NO:17: CCAAAGCTCC TAGTGCCTCA TGAGTCTGCT GAGGATTGCA CAATTGGCGG GTTCGACGTG
CCCCGAGGCA
120
GACGATCCCA
180
CGACTATTGC
240
GTGGTGAGCT
300
GAATTGGTGG
360
GCCTTGTGCA
420
CGTTGTCTAA
480
CTGAAAATAG
540
GCCAATGCAG
600
AACATTGTTC
622 CCATGATCCT GGTTAATGCG CAAATTTTAA ACCGGAGAGG CGTTTGGGAT GGGGAGGAGA TGGTCCTGGC GGCGCTTATT ACTTGTCCGA GGGGACGGGA AAGCGCGTGA ATGCATGATA TGAATTTACA TTGGTGATGT GCCAGTGCAG CTTTAGGAAT CTTTAGGCCT TTCTCTTAGG AAAAAAAAAA AA
TGGGCAATTC
TACGAGGGAT
AGTTGTCCTG
CAGTGCTTCG
CTCACAATGC
GCTAATGTTC
ATCTCCAATG
GATCGTGAGC
AGAAAAATGA
AAAGAGACCC
TGGAAGGTGA
GTGCTGGCCT
AATGGGAACG
CAAAGAGAGA
TTGCGCACCT
TTTTTGAATA
ATCAATAGCA
TGGTTTATAT
AAAAGTGTGG
TCATGCCTAC
TGCCAATAGA
AGTTGGCGAA
GCCATTGGAG
TTAAGAAGGT
ATCAAATAGA
TCCTGAGGAG
AGGTACTGGC
INFORMATION FOR SEQ ID NO:18: SEQUENCE CHARACTERISTICS: LENGTH: 414 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
CACGCTCGAC
CATTGAACTC
120
ACCCCACCCA
180
CAATGCAGTC
240
CGGTGAACTG
300
TCTCCGGCAA
360
AGGAAGCCAA
414 SEQUENCE DESCRIPTION: GAATTCGGTA CCCCGGGTTC TCTCTCTCTC TCTCTCTCTC CATACAGACA AGTAGATACG AATCGCACTA GCGACGGTTC GGTGTGGCTG AGGCCGAAGA GTCCTACACC TTCCTGGTCG GTCCAAGCCC ATCGCCGTCT SEQ ID NO:18: GAAATCGATA AGCTTGGATC TCTCTCTCTC. TCCCCCACCC CGCACACAGA AGAAGAAAAG TGGCCGTCCT AACGACATGG GGCTCGAGAG GCTTCTGAGA GCGACCTCAA GGAGAACCTG CCGATGACAT CAAGCCTCGT
CAAAGCAACA
CCCCTTCCCA
ATGGGGGTTT
GCGTGGAGGG
CAGCAAGGTC
CGGATGCTCA
CTCT
INFORMATION FOR SEQ ID NO:19: SEQUENCE CHARACTERISTICS: LENGTH: 469 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear WO 98/11205 WO 9811205PCTNZ97OO1 12 (xi)
GAATTCGGCA
CTCATCTCCT
120
CTTCTCCGAA.
180
TCATAGGCCA
240
TGGCGGACAA
300
TAAGCAGCCG
360
GCCCCAAATC
420
AATACGGGGA
469 SEQUENCE DESCRI PTION: CGAGTGTCTC TCTCTCTCTC AGCAGTTCTA GGGGTTGTGT CAAACCCAAA GGTACTGCCT CATCCACTTG CTGGGCGGCG GCAGGGCCCG ATGTTTCGGA TGAGGCGGTC COGGACTGCT CAAGGCGGGA ATCCACTT-G CTTTTGGCGC GAGATGAGGA SEQ I D NO: 19: TCTCTCTGTA AACCACCATG TGCTCCTGCT AATTCTATGG TACCCCCGGA GCTGCCGGGC AGACCCCGCT GGCCAGGACC TCCGTCTCGG AGTCCACCCG TCACCACCCA CGACAAGGAC GCTACGGGTA TGCCGGTTTT AGATCACCAT GC-TCGAGCT
CTCTTCCTCA
AGGGCAAGAT
GCATGGCCGA
CTGGCCGCCA
GCGACCATCA
CTCGCTTCTC
GGCTTCGTAG
INFORMATION FOR SEQ ID SEQUENCE CHARACTERISTICS: LENGTH: 341 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
CGGGCTCGTG
TCATCGGGAA
120
AGAAGTATGG
180
CCCCCGACGT
240
CCACCATCGC
300
GCCCGTTCTG
341 SEQUENCE DESCRIPTION: GCTCGGCTCC GGCGCAACGC CATGCTCATG ATGGGCGAGC CGGGATCTTC CACCTCCGCA GGCCCGCCAG GTCCTCCAGG GATCAGCTAC CTCACGTATG GCGGCAGATG CGGAAGCTGT SEQ ID CCTTCCCACC GGGCCCGAGG GGCCTCCCGG TCACCCACCG CGGCCTCGCG AGTCTGGCGA TGGGCTTCCT GCACATGGTT GCCGTGTCGT TCCACGACGG GATCTTCTCG AACCGGCCTG ACCGGGCCGA CATGGCCTTC GCGCACTACG GCGTGATGAA A INFORMATION FOR SEQ ID NO:21: SEQUENCE CHARACTERISTICS: LENGTH: 367 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
GAATTCGGCA
GAGGGGCCTC
120
CGCGAGTCTG
180
GGTTGCCGTG
240
CTCGAACCGG
300
CTTCGCGC.AC
360 SEQUENCE DESCRIPTION: CGAGCGGGCT CGTGGCTCGG CCGGTCATCG GGAACATGCT GCGAAGAAGT ATGGCGGGAT TCGTCCCCCG ACGTGGCCCG CCTGCCACCA TCGCGATCAG TACGGCCCGT TCTGGCGGCA SEQ ID NO:21: CTCCGGCGCA ACGCCCTTCC CATGATGGGC GAGCTCACCC CTTCCACCTC CGCATGGGCT CCAGGTCCTC CAGGTCCACG CTACCTCACG TATGACCGGG GATGCGGAAG CTGTGCGTGA
CACCGGGCCC
AC CGCGCCC T
TCCTCCACAT
ACGCCATCTT
CCGACATGC
TGAAAGCTCT
WO 98/11205 WO 9811205PCTINZ97/001 12 TCAGCGGAAG CGGGCTGAGT CGTGGGA 387 INFORMATION FOR SEQ ID NO:22: SEQUENCE CHARACTERISTICS: LENGTH: 443 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
CACGAGCTCG
CACTCCTTTC
120
AAAGCCCAAA
180
GAACCAAGCA
240
TGCTCTGATA
300
ACTGGCCGAG
360
CGCAAAGAAC
420
CTCCATCCTC
443 SEQUENCE DESCRIPTION: TGAGCCTTCC CGGAGACAAG TCAAGAAACC TAGTCATCCA CTCGTACAGA AGGAGAGAGA ATCACGACGG CCAGTGAAGA GCACTCCCCT TGGTCTTGAA TGCGGGCCTA TGGCTCCACT CCGGAAGCCC CCGTAACCCT TCTTGCACTC TCG SEQ ID NO:22: GCCATCTTAC TTCGCAACAA AGAAGCAGAG CATTGCAACT .GAGAGAGAAT AGAAGCATGA TGAAGAGTTC TTGTTCGCCA GGCCACCATC GAACTGGGGA TTCGCCTGCT CAGATTGCCT TGACCGGATC CTCCGGTTTC
ATTGCGTCCG
GCAAACAGCC
GTGCATGCAC
TGGAAATGAA
TCCTCGAAAT
CCCGTCTCTC
TCGCCAGCTA
INFORMATION FOR SEQ ID NO:23: SEQUENCE CHARACTERISTICS: LENGTH: 607 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
GAATTCGGCA
AACCGGTCCA
120
ACTTAGGTCA
180
AGAGAGAGAG
240
GGAGAGCCAG
300
TGATGCTCTT
360
GAAGGAGCTC
420
CGAAGGGCAG
480
TGGTGTCTTC
540
GATTTTGGCT
600
GCCGGTG
607 SEQUENCE DESCRIPTION: SEQ ID NO:23: CGAGCCAACC CTGGACCAGG TACTTTTGGC AGGCGGTCCA TTGCCCTTCA
AACCGGACCA
ACTGCAACAT
AGAGAGAGAG
ACCCAAGCCG
TACCAATATA
AGGGAAATAA
TTCTTGAACA
ACTGGCTACT
ATGGACATTA
TCACTGTCCT
TTCTTGATCA
AGAGAGAGAG
GGAGGCACCA
TTTTGGAGAC
CAGCAAAACA
TGCTTICTCAA
CTCTCCTCGC
ACAGAGAGAG
TATATACGTT
CAACATATTA
AGAGTTTGAA
GGAGGTTGGC
CAGCGTGTAC
TCCATGGAAC
GCTCATCAAA
CACCGCTCTT
CTATGAACTT
GCATCATGCC
CAATATTCCT
TCAATGGCCA
CACAAGTCTC
CCAAGAGAGC
ATAATGACAA
GCCAAGAACA
GCTCTTCCTG
GGCCTGCCGG
TGCTCATAGA
AAGCAGAGAG
CCGCCGGAGA
TCCTTCAGAG
CTGAGCCCAT
CATCAGCAGA
CCATGGAGAT
ATGACGGAAA
CAT CCAAAAA INFORMATION FOR SEQ ID NO:24: WO 98/11205 WO 9811205PCTINZ97/001 12 SEQUENCE CHARACTERISTICS: LENGTH: 421 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
GAATTCGGCA
AGAGAAGAGA
120
CCAAGTCTCG
180
CCCCATGGTC
240
GCCGGGCGCG
300
GGCACCCGTA
360
CACCCTCCGC
420
C
421 SEQUENCE DESCRIPTION: CGAGCCGTTT TATTTCCTCT GGAGAGGAGA GAATGGGTTC GACGAGGAGG CGAACCTCTT CTCAAGGCCG CCATCGAGCT TTCCTCTCCC CGGGGGAAGTI ATGCTCGACC GGATCTTCCG GACCTCCCCG ATGGCAAGGT SEQ ID NO:24: GATTTCCTTT GCTCGAGTCT GACCGGATCC GAGACCCAGA CGCCATGCAG CTGGCGAGCG CGACCTCCTC GAGATCATGG CGCGGCCCAG CTCCCGACCC GCTGCTGGCC AGCTACTCCG CGAGCGGCTC TACGGCTTAG
CGCGGAAGAG
TGACCCCGAC
CCITCCGTGCT
CCAAGGCCGG
AGAACCCCGA
TGCTCACGTG
CGCCGGTGTG
INFORMATION FOR SEQ ID SEQUENCE CHARACTERISTICS: LENGTH: 760 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: SEQ ID GGAAGAAGCC GAGCAAACGA ATTGCAGACG CCATTGAAAA AAGACACGAA AGAGATCAAG,
AAGGAGCTTA
120
CGAAGCATTC
180
TATTGGAGAC
240
CAGCCAAACA
300
TGCTCCTCAA
360
CTCTCCTCGC
420
ATAGGGAGAA
480
TCGATTTCAG
540
ACCATGGAAC
600
TCAATGGTTC
660
TAAGGGTAGT
720
GCTGACCCGG
760
AGAAGCATCA
GGAAGTCGGC
CAGCGTCTAC
TCCATGGAAC
GCTCATCAAC
AACCGCCCTT
CTTCGAGATC
AGAAGGCCCT
GTACGACTTC
AAAGACAACA
TTCTCATTTC
CGGCACAGGT
TCAATGGCAG
CACAAGAGCC
CCAAGAGAGC
CTGATGACCA
GCCAAGAACA
GCTCTTCCCG
GGGCTGCCCG
GCCCTGCCGC
TTCTCAATCC
TAAGACAGAA
ATCAATGCTT
GATGCCATCC
CCAACGCAGA
TCTTGCAGAG
CAGAGCCCAT.
CATCGGCGGA
CCATGGAGAT
ATGACGGAAA
TCATCCAGAA
TCCTTGATCA
TTAATCGTTC
GATGGAAAAA
GATTTTGAGA
CCGACGGGAA
GCCTCAGCAG
CGATGCTCTC
TGAAGGGCAG
CGGCGTCTAC
GATCTTGGCC
GGCCGGCCTT
GCTCGTGCA.A
ATTTGAATAC
ATAGAAAGGA
TCTCCTTTCT
ACCCAACCAG
TACCAGTATA
AGGGAAATAA
TTCCTGAACA
ACCGGCTACT
ATGGCCATCA
GCCCACAAGA
GATGAGAAGA
AAATACATGC
AGGAAAGTAT
GGTGCGATCA
INFORMATION FOR SEQ ID NO:26:
.IW
WO 98/11205 PCT/NZ97/O01 12 SEQUENCE CHARACTERISTICS: LENGTH: 508 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: GAATTCGGTA CCCGGGTTCG AAATCGATAA
ACTAACCATC
120
ATATCGTGAA
180
AGGGACGGGC
240
GTTCGCGCTG
300
CTTCAAGAAC
360
GAAGGCAATC
420
TCAGACCAAA
480
GGTTCATTTG
508
TGCCTTTCTT
AGGAGTCCGT
TACGTCGGCA
GTTAGGCAGA
TTGGGCGTCA
AAGCAAGCCG
GAATCGTCGA
ATCTGGTTTG
CAT CTT CTTT
CGACGACAAT
ACT TCAT CGT
GCACGGTCTC
CTCTGCTCAT
ACGTGGTGAT
CGCCATTAAA
GGGGGGTC
SEQ ID NO:26: GCTTGGATCC AAAGAATTCG CTTCTGCTTC TCCTCCGTTT GGCCGAGAAG AGCAAGGTCC GGAAGCGAGT GCAAAAGCAG CGACCCCGTC ,A-AGGGCCAGC CGGTGATCTG TACGATCATG ATCGACAGTG GGGCACATGC GGAAGCTGGC AACGTTAAGG
GCACGAGATC
CCTCGTTTCG
TGATCAT CCC
CCCATCCCAC
TCCTCGAGAG
ACAGCTTCGT
TAA:ATGGCCGA
TTTGTTGGTT
INFORMATION FOR SEQ ID NO:27: Wi SEQUENCE CHARACTERISTICS: LENGTH: 495 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: SEQ ID NO:27: GAATTCGGCA CGAGGTTAAT CGCACTGCAG CCTCAACACC ACCCACCTTC CTCCATCTCT
CTCCTCCCTT
120
AAGAGGAAGG
180
ATCCTCATCA
240
GAAGGTCATC
300
GGTGAGTCCG
360
AGAAAGGATT
420
GACATTAACG
480
ACCAGTCAAC
495
CTTCTTTCTC
TGGGGCAGCC
TCGGAGGCAC
AGGTCACTTT
ACAAGGACTT
TTGATTTTGT
CCGAGAGGCG
TACTG
TGACTTCAAT
TAAAGGGGCA
CCGTTTCATC
CTTTACCAGA
CGCTGATTTT
TAAATCTAGT
GATGAAGTCG
GGCAGCCGAC
CTGCGGGTCA
GCTGTGTTTT
GGAAAAGCAC
TCATCCAAGA
CTTGCTCCAG
CACCAATTTT
TCCATGCTTG
CTGCATCAAG
TGTCGAGACT
CCATCACTCA
TCCTGCATTT
AAGGCTTTGA
GGATGCCTGC
CGTTCAGTAT
CAATAAGAAG
ACTTGTCAAA
ACAATTGCCT
GAAAGGAGAC
CGTTGTTTAT
CAAACCTTGA
INFORMATION FOR SEQ ID NO:28: SEQUENCE CHARACTERISTICS: LENGTH: 472 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear WO 98/11205 WO 9811205PCT/NZ97/00112 (xi)
GAATTCGGCA
CCTCGTCGTT
120
GGGCCACCCC
180
GACGCTACTG
240
GAGGAGCCTC
300
CCACTTCCGG
360
TGGAAATGTC
420
TGCAATTGAG
472 SEQUENCE DESCRIPTION: CGAGCATAAG CTCTCCCGTA GGCGGCACTG GCTACCTCGG ACGTACGTCC TCCAGCGTCC CGCTTCAAGA GGCGTGGCGC GTCGACGCTG TGAGGCGGGT AGCCACAACA TCCTGATGCA AAGCGGTTTT TGCCGTCAGA CCGGGAAGGG TCACGTTCGA SEQ ID NO:28: ATCCTCACAT CACATGGCGA GCGGAGGTTC GTGAGGGCGA GGAGACCGGC CTCGACATTG CCAACTCGTC GAGGCCTCG-T CGATGTCGTC GTCTGTGCCA GCTCAAGCTC GTGGAGGCTA GTTCGGAATG GACCCGGCCC TGAGAAATGG. AGGTGAGAAA
AGAGCAAGGT
GCCTGGACCA
AGAAGCTCCA
TCTCAGACCT
TGTCGGGGGT
TCAAAGAAGC
TCATGGGTCA
AG
INFORMATION FOR SEQ ID NO:29: Wi SEQUENCE CHARACTERISTICS: LENGTH: 396 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
GAATTCGGCA
AGACGAAGGC
120
CGTCCGGTTA
180
AGGCCACCGT
240
GAGCGAAAGA
300
CTATTGTTGA
360
AGGATCCGCA
396 SEQUENCE DESCRIPTION: CGAGGAGGCA CCTCCTCGAA GAGAATGAGC GCGGCGGGCG CATCGCCTCG TGGCTCGTCA CCGCGATCCG AATGATCCAA TAGACTTCAA CTGTTCAAAG GGGTTGTGCA GGCGTTTTTC GGCAGAATTA CTTGATCCGG SEQ ID NO:29: ACGAAGAAGA AGAAGGACGA GTGCCGGGAA GGTCGTGTGC AGCTCCTCCT CCAGCGCGGC AAAAGACTGA ACATTTGCTT GAAACCTGCT GGAAGAGGGT AAACTGCCTC TCCCTTTTAT
CTGTAA
AGGACGAAGG
GTGACCGGGG
TACACCGTCA
GGACTTGATG
TCATTTGATC
CATGATGTCA
INFORMATION FOR SEQ ID SEQUENCE CHARACTERISTICS: LENGTH: 592 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: GAATTCGGCA CGAGGTTGAA CCTCCCGTCC CGCTCCCGCA TACTCCACCA CCGCGTACAG 120 TGCCTCGGTT GGGCTGCCCG GGACCCTTCT 180 AGGGCCGTGG GAAGCGAAGA CGTCTCGATT 240 SEQ ID TCGGCTCTGC TCGGCTCGTC ACCCTCTTCG AAGATGAGCT CGGAGGGTGG GAAGGAGGAT GGGTTCCTCT CCCCCTACAA ATTCACCCGC AAGATCACGC ACTGTGGAGT GTGCTACGCA WO 98/11205
GATGTGGCTT
300
GAGATAGTTG
360
CATGTGGGGG
420
CTAGAAGTCC
480
GTGACAAAGG
540
CCAGAAAACT
592
GGACTAGGAA
GAATTGTGAA
TGGGAACTTA
AATGTGAAAA
GAGGATATTC
ACCCGATGGA
TGTGCAGGGA
ACAGGTTGGC
TGTCAATTCA
GTCGGTTATG
TAGTCACATT
TCTAGCAGCG
CACTCCAAG T
TCCAGTGTCC
TGCAGAGAGT
ACTT.TTGATG
GTCGTCCATG
CATTTGCTCT
A T C-CCTGGT
AACGCTTCAA
GCGAGTATTG
GAATTGATGC
AAAGGTATTG
GTGCTGGATC
PCT/NZ97/O01 12
'-CCAGGGCAC
A: GTTGGCGAT
:CAATGACAGG
.2GATGGTACA
CSTCAGGATT
INFORMATION FOR SEQ ID NO:31: SEQUENCE CHARACTERISTICS: LENGTH: 468 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
GAATTCGGCA
AAACAAATGG
120
TACCCTGCAC
180
GGCTTCCACA
240
GGCCCCGAGT
300
CTTCCTCCTT
360
AACTATATGG
420
CCTCCGGTGA
468 SEQUENCE DESCRIPTION: CGAGAACTCA TCTTGAAATG GTTCCGCCGG ATTCGAATCG AAAGCCACAT TGGCGCCATG TCTCCTTCGT CAACACCGAG TCACAAATGG AATGCTGAGC CGGACTTGGA TGCGATCCAA TCAGCCCCAT CAACGATCTT CTTGCATCAA TCTCGGATGG SEQ ID NO:31: TCATTGGAGT CATCATCCTC GCCACAAAGC CGCACGCCGT CTCAAGCTAG CAAAGCTCCT TTCAACCACC GGCGGCTCGC GACTTTCAGT TCCTGACAAT GACATCAAGA TGCTCTGCGA GTATCGAGCC TGGGCTCGAA TTTCATGACA CTCGTGAC
:AGTGAGAAG
T-7TGCATTCCC rCCrATCACAAG
CAGGGCTCGA
CCCCGATGGT
ATICGTCCAGG
CCCGAGCGTC
INFORMATION FOR SEQ ID NO:32: SEQUENCE CHARACTERISTICS: LENGTH: 405 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
CTTTACTCCG
GTCCATCTTC
120
AGCAAGCCCC
180
CGGAATTTTC
240
TTCGACCCGG
300
AGGCATTACA
360
ATCGGGCTGT
405 SEQUENCE DESCRIPTION: CCAAGAAGAT CCAATCGCAG ATCGGGAAGT CTCTTGGCAG TAACTCAGTG GTCTATGTGA CGAAATAGCT TTAGGTTTAG GTCAGTGAGC GGCTCGGAAC GGAGAGGGGG AAGATTGTGA CGGAGCGTTT TGGACTCACA SEQ ID NO:32: TTTTCGCAAT TGGCCCATTA AAGACCGGAG TTGCATTTCC GTCTTGGGAG CATCGCCTCT CCGATAGCCA GCAGCCATTC TCTTAGAGAA TTTGCCCGGT AATGGGCGCC TCAACATGAA ATGGATGGAA CTCCA
CACAAATGCG
TGGCTGGACA
GTGAACGAGT
TTGTGGGTGG
TGCTTTCTGG
GTGCTGGCTC
tl I
IY
WO 98/11205 PCTNZ97/0O112 INFORMATION FOR SEQ ID NO:33: i) SEQUENCE CHARACTERISTICS: LENGTH: 380 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
GGCAAACACG
TCGAGAGCTT
120
AGGAGCTCAC
180
TCCCGACCAT
240
ACGAGGAGCT
300
TCCCCAACGA
360
TCGAGGAGAA
380 SEQUENCE DESCRIPTION: CCCGTTTTCG TTTTACTAAG GTCGAGCAGT GGCATTCAGT AAGCATTGGC GACATCTTCG CGACCTCGAG GACATAGCGT CAGGAAGGCT GCCACCGACT CCTGATTGAG CGTGTAAAGA
GGACAAGCAT
SEQ ID NO:33: AGAAGATGGT GAGCGTTGTG CGATCCCGCA GGAGTATGTG AGGAGGAGAA GAAGCATGAG
CTAAAGACCC'CGTGGTGAGG
GGGGCGTCAT GCACCTCGTC AGGCTGGCGA GGTGTTCTTC
GCTGGTAGAG
AGGCCGAAGG
GGCCCTCAGG
GAGAGGTGCC
AACCATGGGA
AACCTCCCGA
INFORMATION FOR SEQ ID NO:34: Ci) SEQUENCE CHARACTERISTICS: LENGTH: 305 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
TTGTACCCGA
CGAGGCCGCC
120
CGTCGTGGTC
180
AGGAAGCGGA
240
TCGGAGATGG
300
TGTTT
305 SEQUENCE DESCRIPTION: AGATCTCCGG GACCGTTCGA GCCGGAGGCC GGGGAGAAGC GGCGGCGGCG GCGTGGTGGA CATGGCTGGG GGATCGATCG AGAGATGGAA ATGAAAGAGA SEQ ID NO:34: CGGCGACATC GCCGTCGGCC GGGAACCCGT TGGAGTAGCC GCCGTAGCCG GAGAAGGCGC CCTCATCGCC GTCCATGCTG AAGGCGTCGA ACCGATCCGA TCGGCCGGAG GATTTCGAGA GAGAGAGAGA GAGATCCGGT GGACTGGTGG INFORMATION FOR SEQ ID Ci) SEQUENCE CHARACTERISTICS: LENGTH: 693 base pairs TYPE: nucleic acid CC) STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: SEQ ID GAATTCGGCA.CGAGCTAAGA GAGGAGAGGA GAGGAGCAAG ATGGCACTAG CAGGAGCTGC ACTGTCAGGA ACCGTGGTGA GCTCCCCCTT TGTGAGGATG CAGCCTGTGA ACAGACTCAG 120 WO 98/11205 WO 9811205PCT/NZ97/001 12
GGCATTCCCC
180
TGCCATGGCC
240
CCCCGACGAT
300
CTGCCGTGCC
360
GAGCGACGGC
420
CGCCTACCCT
480
AAGCTCTCCT
540
TCTCCCCCCT
600
GGGATGATTT
660
TGAGGAAATA
693
AATGTGGGTC
GCTTACAAGG
GTTTACATCT
GGCTCTTGCT
AGCTTCCTGG
AAGTCTGAGG
ATATTTGCTT
TCACTACATG
GATGTTATTC
AAACTCATGC
AGGCCCTGTT
TCACCCTGCT
TGGACTACGC
CCTCCTGCGC
ATGATGATCA
TCACCATTGA
TTGCATAAAT
TTTGTTAGTT
TGAGTCTAAT
TCTAAAAAAA
TGGTGTCAALC
CACCCCTGAA
CGAGGAGCAA
GGGCAAGGTC
GATTGAGGAA
GACCCACAAG
CAGTCTCACT
CCTTTAGTCT
GTAATGGCTT
AAA
TCTGGCCGTG
GGCAAAGTCG
GGC-ATCGACT
GTGGCGGGGA
GGTTGGGTCC
GAAGAGGAGC
CTACGCAACT
CTTCCTTTTT
TTCTTTTTCC
GCAGAGTGAC
AACTCGACGT
TGCCCTACTC
GCGTCGACCA
TCACTTGTGT
TCACTGCTTG
TTCTCCACTC
TACTGTACGA
TATTTCTGTA
INFORMATION FOR SEQ, ID NO:36: SEQUENCE CHARACTERISTICS: LENGTH: 418 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
AGGACTTTAT
TCCAATAATC
120
ATGCCTTAGT
180
TGTGAAAAAC
240
GATATGATGA
300
TCCTCGGCAG
360
ACATCCCGCA
418 SEQUENCE DESCRIPTION: SEQ ID NO:36: TATAAGCATT GTAAAAAGAG TCAAACTAAT ACATCGCAAG TACAAAAAGA AAAAAGTTTG ATGCATTGAG ATGGTAACTG TTGAAAAATT AACCAACTAT TAAAATTAAT GATGATGAAT TATATAGACT TAAAATTGAC TCAGAAGACA TTC!TTTTCTT ATTCGGTCTA AACAGGCAAA TGGTGTCAA.A CGGGAAGTCG TGACTACCGG GCGGGCGATG .ATGCGGATCC GGGGGCCGGG CGGACCGGTC CACGTTTGGT GCGGTGACAA CAGGCAGCCC
AATTGGGTTA
CTTAATTCAA
ATGGATTATG
CTTATTTTAT
GCAAAACTCT
TCGCTGGAGA
AACCTGGA
INFORMATION FOR SEQ, ID NO:37: SEQUENCE CHARACTERISTICS: LENGTH: 777 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: SEQ ID NO:37: GAATTCGGCA CGAGCATACA ACTACACTGC GACGCCGCCG CAGAACGCGA GCGTGCCGAC CATGAACGGC ACCAAGGTCT ACCGGTTGCC GTATAACGCT ACGGTCCAGC TCGTTTTACA 120 GGACACCGGG ATAATCGCGC CGGAGACCCA CCCCATCCAT CTGCACGGAT TCAACTTCTT 180 CGGTGTGGGC AAAGGAGTGG GGAATTATGA CCCAAAGAAG GATCCCAAGA AGTTCAATCT 240 WO 98/1 1205
GGTTGACCCA
300
ATTCACAGCA
360
TTGGGGACTG
420
TCCACCTCCA
480
ACTAATGACA
540
ATAAGAAAGA
600
CCAAAGAGAC
660
ACTCCGACAC
720
AGTGTAATTT
777
GTGGAGAGGA
GACAATCCAG
AAGATGGCAT
AGTGATCTTC
CCAAGTTAGT
TGAGGAGAGA
CCTTGAGATC
TGCTACAATA
GTTTTTTGGC
ACACCATTGG
GAGTTTGGTT
TCTTGGTGGA
CAAAATGTTG
GGAATCTTCT
AGCCATAGAA
ACGACATCCC
AATTAAGGAA
AAGCTCATCA
AATCCCATCT
CCTGCACTGC
CAATGGGAAG
ATCATTTGAT
CTTTGAAAAA
GATTTGACCA
GCAATTGTTT
GACAAGGAAT
CATGAATCAC
GGTGGATGGA
CATCTGGAAG
GGGCCTAAAG
CATGAGGACG
GAAGAAGAAG
AGAAGAGAGA
CTAGAGTAAT
TTGGTTTTTT
AT GGAAAAAA PCTNZ97/0O1 12
TAGCCATCAG
TGCACACAAC
AGACCCTGCT
ACAAGCGATT
AGCAAGAAGA
GGGCAATAAA
AGAAGGATTT
TCATTGGAGG
AAAAAA
INFORMATION FOR SEQ I0 NO:38: Ci) SEQUENCE CHARACTERISTICS: LENGTH: 344 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
ATATGTTCAG
ATACGTTGAA
120
TCGATGTTCA
180
ACTACTACAT
240
TACACTACAC
300
AAAAACATTG
344 SEQUENCE DESCRI PTION: AATTTCAAAT GTGGGAATGT GCTAGTCGAG GTTGAAGGAT CGTGGGCCAA TCCATGGCTG TGTCGCATCC ACCCGGTTCA CAACTCGCTT ACCCCAGTTT GTCCATGAAG CAAGCAAGAA SEQ ID NO: 38: CAACCTCCTT GAACTTCAGA ATTCAGGGCC CTCACACCGT CCAGAACATG TATGATTCAA TCTTAGTGAC CTTAAATCAG CCTCCAAAGG CCAAGACGGT TCTCAATGCA ACTGCAGTGC CCGGGCCACT ACCAGCTGGT CCAACTTACC CAATCAGGTG GAAC INFORMATION FOR SEQ ID NO:39: SEQUENCE CHARACTERISTICS: LENGTH: 341 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
GCCGCAACTG
GGGAGCTCTC
120
TGATTTTGTC
180
GGTGAACGGG
240
CAATGTCGTC
300
GAGATCTGGT
341 SEQUENCE DESCRIPTION: CAATTCTCTT CGTAAAACAT CTCCTCTTCT CTGTGGCGGT GTTCAAGCGA CCAAGGTGAA CAATTCCCGG GTCCGACTTT AACAAAGCTC GCTACAACGT TGGGCTGATG GGGCGGAATT SEQ ID NO:39: GACGGCTGTC GGCAAAACCT CTTTCCTCTT GACATTGGCA GATGCAAAAG TTTACTACCA GAGGCTGTGC ACGACCCACA ACACCATCAC GGAAGTTAAC GACGGCGACA CCCTCGTTGT CACCATTCAC TGGCACGGCG TCCGGCAGGT TGTGACTCAA T 1 1
I
WO 98/11205 PCTINZ97/00112 INFORMATION FOR SEQ ID SEQUENCE CHARACTERISTICS: LENGTH: 358 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
GAATTCGGCA
CAGAATTCAG
120
CATGTATGAT
180
TCAGCCTCCA
240
TGCAACTGCA
300
TGGTCCAACT
358 SEQUENCE DESCRIPTION: CGAGATATGT TCAGAATTTC GGCCATACGT TGAAGCTAGT TCAATCGATG TTCACGTGGG AAGGACTACT ACATTGTCGC GTGCTACACT ACACCAACTC TACCAAAAAC ATTGGTCCAT SEQ ID AAATGTGGGA ATGTCAACCT CGAGGTTGAA GGATCTCACA CCAATCCATG GCTGTCTTAG ATCCACCCGG- TTCACCAAGA GCTTACCCCA GTTTCCGGGC GAAGCAAGCA AGAACAATCA
CCTTGAACTT
CCGTCCAGAA
TGACCTTAAA
CGGTTCTCAA
CACTACCAGC
GGTGGAAC
INFORMATION FOR SEQ ID NO:41: Wi) SEQUENCE CHARACTERISTICS: LENGTH: 409 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
ATCAAGAGTT
TGCTGATCGG
120
TTCCTCTTGG
180
TACTACCATG
240
ACCATCACGG
300
CTCGTTGTCA
360
CGGCAGGTGA
409 SEQUENCE DESCRIPTION: TGAGTCTAAA CCTTGTCTAA CCGCAGCTGC ATTCTCTTCG GAGCTCTCCT CCTCTTCTCT ATTTTGTCGT TCAAGCGACC TGAACGGGCA ATTCCCGGGT ATGTCGTCAA CAAAGCTCGC GATCTGGTTG GGCTGATGGG SEQ ID NO:41: TCCTCTCTCG CATAGTCATT TAAAACATGA CGGCTGTCGG GTGGCGGTGA CATTGGCAGA AAGGTGAAGA GGCTGTGCAC CCGACTTTGG AAGTTAACGA TACAACGTCA CCATTCACTG GCGGAATTTG TGACTCAAT
TGGAGACGAA
CAAAACCTCT
TGCAAAAGTT
GACCCACAAC
CGGCGACACC
GCACGGCGTC
INFORMATION FOR SEQ ID NO:42: i) SEQUENCE CHARACTERISTICS: LENGTH: 515 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: SEQ ID NO:42: CTCTCTCTCT CTCTCTCTCT GTGTGTTCAT TCTCGTTGAG CTCGTGGTCG CCTCCCGCCA TGGATCCGCA CAAGTACCGT CCATCCAGTG CTTTCAACAC TTCTTTCTGG ACTACGAACT 120 .4) WO 98/11205
CTGGTGCTCC
180
TTCTTGAGGA
240
AGCGTGTGGT
300
TTTCCCAGCT
360
TCCGTTTCTC
420
GTTTTGCTGT
480
CTGTCTTCTT
515
TGTCTGGAAC
TTATCACCTC
GCATGCCAGA
TACCTGTGCT
CACTGTCATC
GAAGTTCTAC
TGTCCGTAAT
AATAACTCTT
GTGGAGAAAC
GGAGCCAGTG
GATTTCCTTC
CACGAAAGGG
ACAAGAGAGG
GGGATAAATT
CGT TGACTS T TTGCCAACT T
CAAAGGGATT
GGGCACCAGG
GCAGCCCT GA
GTAACTTTGA
CCCCG
TGGAAGCAGA
TGATAGGGAG
C-LTTGAGGTC
AGTTCAAACA
AACCC7TGAGG
TCTGGTGGGA
PCT/NZ97/OO1 12
CGTCCAATTC
AGGATTCCAG
AC'.TCATGACA
CCCGTGATTG
GACCCTCGAG
AACAATTTCC
INFORMATION FOR SEQ ID NO:43: SEQUENCE CHARACTERISTICS: LENGTH: 471 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
GAATTCGGCA
ATTTGCGGCG
120
GTAAGCCAGG
180
GCTGAGAAGA
240
GATGTGAAGA
300
CACGGGGCCA
360
TTCCCCGTCA
420
ACTGGTGGAC
471 SEQUENCE DESCRI PTION: CGAGGCTCCC TCTCGTACTG ATCCATTTCT CGATTCAAGG AGTACAAGAA GGCTGTCGAG GCTGCGCTCC GCTCATGCTC CGAAGACCGG AGGCCCGTTC ACAGCGGGCT CGACGTTGCC TCACTTATGC TGATTTCTAC CTGAAGTTGC TTTTCACCCG SEQ ID NO:43: CCATACTCCT GGGACGGGAT GGAAGAATCA TGGGGAAGTC AAATGCAAGA AGAAGTTGAG CGCATCGCGT GGCACTCCGC GGGACCATGA AGCACGCCGC GATCAGGTCT TGCAGCCGAT CAGCTGGCTG GCGTCGTTGC GAAGAGAGGC AAACCACAAC
TCGGATAGGG
CTACCCGACC
AGGCCTCATC
CGGTACCTTC
GGAGCTCAGC
CAAGGATCAG
TGTGGAAGTT
C
INFORMATION FOR SEQ ID NO:44: SEQUENCE CHARACTERISTICS: LENGTH: 487 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
GAATTCGGCA
TCAGTTTCGT
120
CGTCCAGCGC
180
ATGACTCATC
240
TTGAGAAACT
300
GAGCCAGCGC
360 SEQUENCE DESCRIPTION: CGAGCTCCCA CTTCTGTCTC GCTCTCTTCG TCATCTCTGC TTACGATTCC AGCTTTTGGA GCTGACTGTT GGAACTAGAG TGCCAACTTC GAGAGAGAGA GAAAGGGTTC TTCGAGGTCA SEQ ID NO:44: GCCACCATTA CTAGCTTCAA CTCTTGCCAT GGATCCGTAC CAACCAACTA CGGTGCTCCC GTCCGATTCT CCTGGAGGAC GGATTCCTGA GCGGGTGGTC CCCACGACAT CTCTCACTTG
AGCCCAGATC
AAGTATCGCC
GTCTGGAACA
TACCATCTGA
CATGCACGGG
ACCTGTGCTG
WO 98/11205 WO 9811205PCT/NZ97/O01 12 ATTTCCTCCG GGCTCCTGGA GTCCAGACGC CCGTAATCGT CCGTTTCTCC A CCGTCATCC 420 ACGAGCGCGG CAGCCCGAAC CTCAGGGACC CTCGTGGTTT TGCAGTGAAG T1,CTACACCA 480
GAGAGGG
487 INFORMATION FOR SEQ ID SEQUENCE CHARACTERISTICS: LENGTH: 684 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
GAATTCCTGC
GCGCGCCTGC
120
TTGTTGGACG
180
CCCAAGGAAG
240
GTCTGTTTTG
300
GAGGTGATGC
360
CCAGGGCAGA
420
AAAGAAGCAG
480
GCTCTGCGAA
540
CACTCCATCG
600
GACATGGCTC
660
ATGCGAATCT
684 SEQUENCE DESCRIPTION: SEQ ID AGCCCGGGGG ATCCACTAGT TCTAGAGCGG CCGCCACCGC GGTGGAGCTC
AGGTCGACAC
CCATGGAAGC
GACTGGCTCT
ACGCCAACGT
AAGGGAAACC
TCGAAGCCGC
CGCGGCTTCA
CATCGCCACA
AGCGGGAGAT
TCCACGGCGG
CTTTGGCAGC
TAG TGOAT CC
TCTCCGGAAA.
CGTCAACGGC
GCTGGGCGTG
GGAGTTCGTA
GGCCGTCATG
CGAGAAAGAC
GTGGTTGGGG
CAATTCCGTC
CAACTTCCAG
CGTC
AAAGAATTCG
GCCGGGATTC
ACAGCGGTGG
CTGGCTGAGA
GATCCGTTAA
GAGTTCCTCC
CCGTTGAGCA
CCTCCGATCG
AACGACAAT C
GGAACACCCA
GCACGAGGCC
TGGAACCOTT
GATCCCCGT
TTCTGTCTGC
CCCACCAGTT
TCGACGGTAG
AACCGAAACA
AAGTCATCCG
CGTTAATCGA
TCGGAGTTTC
CGACGGCCAC
TAAACTGCAG
GGCCGCGTCC
GCTCTTCTGC
GAAGCACCAC
CGACTACGTG
AGACCGCTAC
CGCTGCTACT
TGTCTCCAGG
CATGGACAAC
INFORMATION FOR SEQ ID NO:46: SEQUENCE CHARACTERISTICS: LENGTH: 418 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
GAATTCGGCA
GAACTCCTGG
120
TATGATTTGA
180
TGGTCATAAA
240
CATTGGATTT
300
AAAGTGGCGG
360 SEQUENCE DESCRIPTION: CGAGGACAAG GTCATAGGCC CCCATTCTGA AATAAATAAT GTCCTCGGAT CTTTTTGTTG GCTTGATTTT GTTTTTCTTT GCCAGAAATA TGTAAGGGTG ATCATTTGGG TAGCATGCAG SEQ ID NO:46: CTCTCTTCAA ATGCTTGGAT CTTCCAAGAT CGCCTTTATA ATGCAGTTGT TTACCGATCT CTTTTGTTTT ATACTOCTOG GCAGATCATT TGGGTGATCT ATCAGTTGGG TGATCGTGTA
GGGTGGAAAG
CAACGACTGC
GGAATTTGAT
ATTTGCATCC
GAAACATGTA
CTGCTTTCAC
11 WO 98/11205 WO 9811205PCTNZ97OO1 12 TATTACTTAC ATATTTAAAG ATCGGGAATA AAAACATGAT TTTAATTGAA. A.;AAAAAA 418 INFORMATION FOR SEQ ID NO:47: SEQUENCE CHARACTERISTICS: LENGTH: 479 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
GATATCCCAA
CGAGCAAGGA
120
TTAAAAGCAC
180
TTCGAGCAGC
240
CGTATTTGGG
300
CTGCCGTTGC
360
GGGTCGAGGA
420
GTGTCACTAC
479 SEQUENCE DESCRIPTION: CGACCGAAAA CCTGTATTTT AGAAAATATG GTTGCAGCAG TGGGCTGTGC ACGGACTTCG CAAGGCCATG GAAGGAAGTC AGCCAAGGAG ATTTCCATTG TCGAAGATCG CAAGTGAAAG GAGTTCAAAC TGGGTTCTCA TGGTTTCGGA GCCACTTCTC SEQ ID NO:47: CAGGGCGCCA TGGGGATCCG CAGAAATTAC GCAGGCCAAT GCTCGTCTGG CA'GCGATCCA ACTTTGAAGA AGTGAAAGCG AAGGGAAATC TCTGACAATC TGAA-ATTGGA TGCTGCGGCT CCCAGATGAC CAAGGGGACG ACAGGAGAAC GAACCAGGGA GA ATTCGGCA
GAAGTTCAAG
'CTGAACTGGG
ATGGTGGATT
TC-AGACGTTG
GCCAAATCTA
GATACCTATG
GCCGAGCTT
INFORMATION FOR SEQ ID NO:48: SEQUENCE CHARACTERISTICS: LENGTH: 1785 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
TATCGATAAG
CGCCACCGCG
120
CACGAGGTTG
180
ATATGGCAAA
240
CGATCTCGCC
300
CGTGGTGTTC
360
TCACTGGAGA
420
GCACTACAGA
480
CGCCGAGTCT
540
TATTATGTAT
600
CAAGCTCAAG
660
TGGGGATTTC
720 SEQUENCE DESCRIPTION: SEQ ID NO:48: CTTGATATCG AATTCCTGCA GCCCGGGGGA
GTGGAGCTCG
CAGGTCGGGG
ATCTTTCTGC
AAGGAGGTCC
GATATCTTCA
AAGATGCGCA
TTCGCGTGGG
TCCACCTCGG
AGGATGATGT
GCCCTCAACG
ATTCCCATTC
CGCGCCTGCA
ATGATTTGAA
TCAAGATGGG
TGCACACCCA
CGGGCAAGGG
GGATCATGAC
AAGACGAGAT
GCATTGTCAT
TCGACAGGAG
GAGAGCGAAG
TTAGGCCCTT
GGTCGACACT
TCACAGAAAC
CCAGAGGAAT
GGGCGTCGAG
GCAGGACATG
TGTGCCTTTC
CAGCCGCGTG
CCGTAGGCGC
ATTCGAATCC
TCGATTGGCC
CCTCAGAGGT
T.CCACTAGTT.. CTAGAGCGGC AGTGGATCCA AAGAATTCGG CTCAGCGATT TTGCCAAGAA CTTGTGGTAG TTTCATCTCC TTTGGGTCTC GAACCCGGAA GTGTTCACCG TCTATGGAGA TTTACGAATA AAGTTGTCCA GTCGCGGATG TGAAATCCCG GTCCAGCTCA TGATGTATAA GAGGACGACC CGCTTTTCCT CAGAGCTTTG AGTACAATTA TATCTCAGAA TCTGCAATGA WO 98111205
GATTAAAGAG
780
CAACAGTACC
840
TAGATGCTCA
900
TCAACGTTGC
960
TGAACCACCA
1020
GCGTGCAGAT
1080
AAACCCTTCG
1140
CCAAGCTCGG
1200
TGGCCAACAA
1260
AGGAGGAGAA
1320
GAGGAGGAGC
1380
ACTTGTTCAG
1440
GAAGGGCGGG
1500
AGCTTCTGCT
1560
AAACACTCCA
1620
TAGCACTTCA
1680
AATAAAAGTT
1740
GGGGAATTTT
1785
AAACGGCTCT
AAGACTAGTA
GGACAAGGGA
AGCAATTGAG
GGACATTCAG
AACGGAACCA
TCTCCGCATG
GGGCTACGAT
CCCCGCCAAC
GCACACCGAA
TGCCCGGGAA
AACTTCCACC
CAGTTCAGCC
TAATCCCAAC
TCTATCATGA
AAAGTTTGCT
TGCATAAATT
ACTGCTAAAA
CTCTTTTCAA
CCAACACCGG
lGAGATCAATG
ACAACGCTGT
AGCAAGGTGC
GACACGACAA
GCGATCCCCT
ATTCCGGCAG
TGGAAGAACC
GCCAATGGCA
TCATTCTGGC
TTCTGCCGCC
TTCACATTCT
TTGTCAGTGA
CTGTGTGTGC
AGGATTTCAA
AAATGATATT
GGACTACTTC
GGGAGCTCAA
AGGATAATGT
GGTCGATGGA
GCGCAGAGCT
GGTTGCCCTA
TGCTCGTCCC
AGAGCAAGAT
CCGAGGAGTT
ACGACTTCAA
GCTGCCTCTC
GCCCGGGCAG
CAACCATTCT
CTGGTATATA
GTGTCCACTG
TAACAGACAC
TCAATATACT
GTGGAAGAGC
GTGTGCA.ATG
TTTGTACATC
ATGGGGAATA
GGACGCTGTT
CCTTCAGGCG
CCACATGAAT
CCTGGTGAAC
CC-GCCCCGAG
ATTCCTGCCT
CTCGCACTCT
AGCAAAGTGG
CTCATCG-TCG
AATGCGCGCA
TCGAGTCTAC
CGTCAATTAT
ATTTTGACTC
PCTINZ97/001 12 '3CAAGAAGCT
GACCATATTT
GT TGAGAACA
GCGGAGCTGG
CTTGGACCAG
GTTGTGAAGG
fCT7CCACGACG
GCCTGGTGGT
C3-GTTCTTCG
T-CGGTGTGGG
CCATCGGAAG
ATGT CACTGA
CCAAGCCCAT
CCTGAACAAA.
TAAGAGCTCA
GTCATGTTTC
TCCACCAATT
INFORMATION FOR SEQ ID NO:49: SEQUENCE CHARACTERISTICS: LENGTH: 475 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
GAATTCGGCA
GTCCTCGTCC
120
TAGGAACCTG
180
ATTTTCCAGC
240
ATTCACTGTG
300
CGAGGCGCTC
360
GAAAATCTTC
420
GAGCCTTCGC
475 SEQUENCE DESCRIPTION: CGAGATTTCC ATGGACGATT TCGTTTTCCT TGTTCTTCCT CCGCCAGGAC CCCCGGCATG GGCGCGTTCG AGACCTCAGT TGGCTCGGTT CCCGCCCTCT GTACAGAAGG GCTCCGTCTT AGTAGCAACC AGCACAACAT AGGAATCTGG TTAAAGAAGC SEQ ID NO:49: CCGTTTGGCT TCAATTCGTT CCGACTTTTT CTCTGGAAGC GCCGATCGTA GGGAACGTCC GAAGAAATTC CATGAGAGAT GCTGATGATC ACCGACCGCG CGCTGACCGC CCGCCCGCCC CACTTCGGCT GAATACGGCC CCTGAGACTT CGGCGATGAA
TCCTCTGGCT
TATGGCGTAA
TTCAGATTGG
ACGGTCCAAT
AGCTTGCCCA
TCGGGATGCA
CGCTGTGGCG
GGCTT
INFORMATION FOR SEQ ID WO 98/11205 WO 9811205PCTNZ97OO1 12 SEQUENCE CHARACTERISTICS: LENGTH: 801 base pairs TYPE: nucleic acid STRANDEDNESS: sinqle TOPOLOGY: linear (xi)
GCTCCACCGA
GGCAATTCGA
120
CGTATGTTGT
180
GATTACGCCA
240
GGTGGCGGCC
300
CAGGCCTGAG
360
GCCATTCGGT
420
GTCTATGTTG
480
AGAAGACATA
540
GGCCATTGCT
600
AATTGATCTG
660
CTCCTTTTCC
720
CTGAAGCCCA
780
AATTGAGTAT
801 SEQUENCE DESCRIPTION: SEQ ID CGGTGGACGG TCCGCTACTC AGTAACTGAG
TTTAGCTCAC
GTGGAATTGT
AGCGCGCAAT
GCTCTAGAAC
AGATTTCTTG
GCAGGGCGCA
GGACACCTGC
GATCTCACAG
ATTCCTCGAT
ATAGTAAGTT
ATAGTCAACA
ACTTCTAGCA
TTCTCTGTAG
TCATTAGGCA
GAGCGGATAA
TAACCCTCAC
TAGTGGATCC
AGGAAGATGT
GGATCTGCCC
TTCATCATTT
AGAATCCAGG
TGCCTGATCA
TGAATTTTGT
TGCAGCTTTC
AGCAATAACT
CCCCAGGCT T
CAATTTCACA
TAAAGGGAAC
.AAAGAATTCG
TGATATTAAG
TGGTGCACA.A
CGTATGGGCA
GCTTGTTACT
TCTCTACAAG
TTTGATACAA
TTTCTCTGAA
GTATATTTTA
TGGGATCCCC CGGGCTGACA TACACTTTAT GCTTCCGGCT CAGGAAACAG CTATGACCAT AAAAGCTGGA GCTCCACCGC GCACGAGACC CAGTGACCTT GGCCATGATT. ACAGOCTACT TTGGGTATTA ATTTAGTTCA CCTCCTGAGG GAATGAAGGC TTCATGGCCA AGCCTGTGCA CGACAGCCAC TCAATTGATC AACGAAATAA CGTGCAGTTT GCGCATGCAG CTTTCTTTCT GAACAAATAC CTATTCCTCA INFORMATION FOR SEQ ID NO:51: SEQUENCE CHARACTERISTICS: LENGTH: 744 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
GGGCCCCCCT
AAGGACGCTG
120
GAGTACCCGG
180
TCTACCATGT
240
TTGGTGGATG
300
CACATTTCAG
360
GCTGTGAAAC
420
ATGAAGTGGA
480 SEQUENCE DESCRIPTION: TCGAGGTGGA CACTAGTGGA TGCTTGAAGG CTCCCAGCCA CCATCGATCA GAGATTCAAC TGATGAACAA GATTTTGGAT TGGGAGGAGG TATTGGGTCG GAATCAACTT CGACTTGTCC ATGTGGGTGG AGACATGTTT TTCTGCATGA TTGGAGCGAT SEQ ID NO:51: TCCAAAGAAT TCGGCACGAG TTCACCAAAG CCCATGGAAT AAGATTTTCA ACAGGGCTAT ACTTACGAGG GTTTTAAGGA ACTCTCAATC TCATAGTGTC CATGTGCTGG CCGATGCTCC GATAGTGTAC CAAGTGGCCA GATCATTGCA GGAAGCTTTT
GTTTTATCTG
GAATGCGTTC
GTCTGAGAAT
GGTTCAGGAG
TAGGTATCCC
TCACTACCCA
AG C TATTTT T
GAAGAATTGT
WO 98/11205 PCT/NZ97/00112 CACAAGGCGT TGCCAGAGAA GGGGAAGGTG 540 GCAGAGACAT CTCCTTATGC TCGTCAGGGA 600 AACCCAGGGG GCAAGGAACG CACAGAGCAA 660 TTTGCAGGTG GTGTTGAACC TGTATGTTGT 720 CAGCCCGGGG GATCCACTAG TTCT 744 ATTGCGGTGG ACACCATTCT TTTCATACAG ATTTACTGAT GAATTTCAAG ATTTAGCTAA GTCAATGGAA TGTGGGTAAT
CCCAGTGGCT
GTTGGCATAC
GGAGACGGGA
GGAATTCCTG
INFORMATION FOR SEQ ID NO:52: SEQUENCE CHARACTERISTICS: LENGTH: 426 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
GTGGCCCTGG
GGTTTCTCTC
120
AGCTCAAGAA
180
CATTGCTGGG
240
TTGTCTATCT
300
AGGCGTTTCT
360
CGTACATCGC
420
TGGAGC
426 SEQUENCE DESCRIPTION: AAGTAGTGTG CGCGACATGG TTGGCTTGCT CTCTACATTG GAGGCGCCTC CCGCCGGGCC AGCGATGCCT CACGTTACTC CAAACTGGGG ACGTCCGACA GAAGACTTTG GATATAAACT CTACGATTCT CAGGACATGG SEQ ID NO.:52: ATTCCTTGAA TTTGAACGAG GATTTCGTTA TGTTTTGAGA CATCGGGATG GCCAGTGGTG TCTACAACAT GTATAAGAAA TGGTTGTGGC CTCCACGCCC TCTCCAACCG GCCGGGAAAT TGTGGGCAGC GTATGGAGGA
TTTATGTTGT
TCGAACTTGA
GGAAGTCTGC
TATGGCCCCG
GCTGCAGCTA
GCAGGAGCCA
CGGTGGAAGA
INFORMATION FOR SEQ ID NO:53: SEQUENCE CHARACTERISTICS: LENGTH: 562 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
CAGTTCGAAA
ACACTAGTGG
120
CAGGATTTCT
180
AGAGGTGAAG
240
AGTGGGACAC
300
CGTGTACCCT
360
CTGGAACCTC
420
CATTAACGCC
480 SEQUENCE DESCRIPTION: TTAACCTCAC TAAAGGGAAC ATCCAAAGAA TTCGGCACGA TCTTGTCCAA ACAGGTTTAA GCTCAGACAA CCCAAGCAGA AAAAGTCTTT TGCAGAGCGA CGTGAGCCCG AGCCAATGAA ATGACTACTT CTGCCGATGA AAGAACACCA TGGAGATTGG SEQ ID NO:53: AAAAGCTGGA GTTCGCGCGC GCTTTGAGGC AACCTACATT GGAAATGGCA GGCACAAGTG GGAGCCGGTT AAGGTTGTCC TGCCCTCTAT CACTATATAT GGAGCTCCGC GAAGTGACTG GGGTCAATTT CTGGGCCTCC GGTGTACACT GGTTACTCGC
CTGCAGGTCG
CATTGAATCC
TTGCTGCAGC
GCCATCAAGA
TGGAAACGAG
CCAAGCATCC
TGCTGAAGCT
TTCTCAGCAC
WO 98/11205 PCT/NZ97/00112 AGCCCTTGCA TTGCCCGATG ATGGAAAGAT TCTAGCCATG GACATCAACA GAGAGAACTA 540 TGATATCGGA TTGCCTATAA TT 562 INFORMATION FOR SEQ ID NO:54: SEQUENCE CHARACTERISTICS: LENGTH: 1074 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
TCGTGCCGCT
GCACGCTGAG
120
GAATGGGAAA
180
GCTTCAAAAC
240
TCGAGAGGAC
300
GGAGATGATG
360
TGCTAAAAAG
420
CGCTCTTCCT
480 CT GGCCCTG C 540
GTTGGACTAT
600
CGTGGACGCA
660
CGTGGGGGGC
720
TCCCCACAAC
780
CAACTCCATG
840
TGTCACTGTT
900
TATATGATAA
960
TTTCTGTTTA
1020
GCCGCTTGCA
1074 SEQUENCE DESCRIPTION: SEQ, ID NO:54: CGATCCTCAC AGGCCCTTTT TATTTCCCTG
AATGGCAACG
CCAGGTTATG
GTTATGGAAG
GAGGCGTCCA
ACATTGCCAG
GCATTGGAGA
TCTGATGGCA
TTCGTTAAGG
TTGGATTCCC
GACAAAGTGA
GTCATAATTT
CTGCTTAAGA
GTAGCCAACG
TGTTACCGCA
TGGCGTCGAT
GCCAGAATGT
GTTCAAAAA-A
GGGTGGAGGT
ACAAGCGTAC
AATCCATTTA
AGGAGCTCTG
ATCAGGTGCA
TCGGAGTTTT
AGGTGGTAGC
CTGGAGTTGC
TTATTCAAAA
ACTACGTGAA
ACGACGACAC
ATGATTACAT
ACCCCAACTT
CTGCTTAGTT
TTCTGATATA
TTCGATCGTC
TGTTGATCCA
GCTGCCTGCG
CAAG TACATG
GGAACGAACA
GTTCCTGCGC
CACTGGCTAT
TGTGGATCCA
AGACAAAGTG
GGGGGAGAAG
CTATCATCCA
CCTCTGGTTT
GAGGACTTCT
GGAGGTCGCC
AGCTAGTCCT
*GGTGGTTTTT
ATGGTTTCTG
AAAAACTCGA
GTGAACGATA
ACGGACTTAA
GACTGGAAG T C TGGAAACAT
TGGAACCTGA
TTGATGGTAA
TCATTGCTCA
GGAGATGACC
GAGATCAAGA'
GATTGCTTCG
CGGCTGATGA
GGTCTGGTGG
CTGGAGGGTA
ACAGTCTTTA
CCGTCATTCT
CAATGTTTCT
TTAAAGCCAG
GACTAGTTCT
CGATGGGCTC
CTGACATCGA
TTGGAGTGAA
TCACCCGCCA
CACAGAGAGG
AGATGTCAGG
ATATCGCTCT
CCAAATTTGG
AAACTACAGG
ACTTTGCATT
AGTTAGTGCG
GAGGAAAGGA
TCAAGGCCAT
TGGGATATGG
GCTATG TAT C
ATCGTCATGT
AATAAAATTA
CTTC
INFORMATION FOR SEQ ID SEQUENCE CHARACTERISTICS: LENGTH: 1075 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: SEQ ID TCGGAGCTCT CGAATCCTCA CAGGCCCTTT TTATTTCCCT GGTGAACGAT ACGATGGGCT 1, 1 WO 98/11205
CGCACGCTGA
120
AAGAATGGGA
180
AGCTTCAAAA
240
ATCGAGAGGA
300
GGGAGATGAT
360
GTGCTAAAAA
420
TCGCTCTTCC
480
GCTGGCCCTG
540
GGTTGGACTA
600
TCGTGGACGC
660
GCGTGGGGGG
720
ATCCCCACAA
780
TCAACTCCAT
840
GTGTCACTGT
900
GTATATGATA
960
TTTTCTGTTT
1020
AGCCGCTTC
1075
GAATGGCAAC
AACCAGGTTA
CGTTATGGAA
CGAGGCGTCC
GACATTGCCA
GGCATTGGAG
TTCTGATGGC
CTTCGTTAAG
TTTGGATTCC
AGACAAAGTG
CGTCATAATT
CCTGCTTAAG
GGTAGCCAAC
TTGTTACCGC
ATGGCGTCGA
AGCCAGAATG
AGTTCAAAAA
GGGGTGGAGG
TGACAAGCGT
GAATCCATTT
AAGGAGCTCT
GATCAGGTGC
ATCGGAGTTT
AAGGTGGTAG
GCTGGAGTTG
CTTATTCAAA.
AACTACGTGA
TACGACGACA
AATGATTACA
GACCCCAACT
ACTGCTTAGT
TTTCTGATAT
TTTCGATCGT
TTC-TTGAT-C
CGCTGCCTGC
ACAAGTACAT
GGGAACGAAC
AGTTCCTGCG
TCACTGGCTA
CTGTGGATCC
CAGACAAAGT
AGGGGGAGAA
ACTATCATCC
CCCTCTGGTT
TGAGGACTTC
TGGAGGTCGC
TAGCTAGTCC
AGGTGGTTTT
CATGGTTTCT
AAAAAACTCG
AACGGACTTA
GGACTGGAAG
GCTGGAAACA
ATGGAACCTG
CTTGATGGTA
TTCATTGCTC
AGGAGATGAC
GGAGATCAAG
GGATTGCTTC
AC GGCTGATG
TGGTCTGGTG
TCTGGAGGGT
CACAGTCTTT
TCCGTCATTC
TCAATGTTTC
GTTAAAGCCA
AGACTAGTTC
PCTINZ97/00112
ACTGACATCG
TTTGGAGTGA
TTCACCCGCC
AkCACAGAGAG
AAGATGTCAG
AATATCGCTC
CCCAAATTTG
AAkAACTACAG
GACTTTGCAT
AAGTTAGTGC
GGAGGAAAGG
ATCAAGGCCA
ATGGGATATG
TGCTATG TAT TAT CGTCATG
GAATAAAATT
TCTTC
INFORMATION FOR SEQ ID NO:56: SEQUENCE CHARACTERISTICS: LENGTH: 1962. base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
GTTTTCCGCC
AATCAATTGA
120
GGTCGAGCAT
180
TCATTCGTAT
240
GGCGACAGAC
300
CGGTCTGGCG
360
CATCGAATTT
420
CAATCCTTTC
480
TCATAGTTAC
540
TCGTCATCAC
600 SEQUENCE DESCRIPTION: SEQ ID NO:56: ATTTTTCGCC TGTTTCTGCG GAGAATTTGA TCAGGTTCGG *ATTGGGATTG
AAGGTTTTTA
CTGTACAGAT
TGCTTTGAGA
AGAACTTATT
AAGCTCGGGT
GCGTTTGTGT
TACAAGCCGG
CCTGGCAGCT
AATCGATGAT
TTTTCAGTAT
CGAAGCTTCC
GAGTAGCGGA
GCTTTTCAGA
TGCAGCAGGG
TCATGGGGGC
GCGAGATCGC
TATGTGGAGA
GCTCCCAAGG
TTCGATCGCC
CGATATCGAG
ATTCGCAGAC
GGTGGAACTG
GCAGGTTGTC
CTCTGTCCGG
CAAACAGGCC
AACTGGCCGA
AAGGTTGCCA
ATGGCCAACG
ATCTCCGACC
AGACCCTGTC
ATTTCTCGCA
ATGCTTCTCC
GGCGCCATTG
AAGGCCGCGG
TCTGCAGAGC
ACATATTTCC
GAATCAAGAA
ATCTGCCTCT
TGATCGATGG
AGGTCGCTGC
TTCCGAATTG
TGACCACGGC
GCGCGCGCGA
CACGATGTGC
GTTCTGACCG
WO 98/11205
AAGCCGACGA
660
CCTATTCTTC
720 TGTCCAGCGT1 780
ACGTGATACT
840
GCGCGCTCAG
900
TGGAGCTGAT
960
ACATCACAAA
1020
CCGGCGCTGC
1080
CCATTTTCGG
1140
CCTTCGCAAA
1200
CTCAAATAAA
1260
AAATCTGCAT
1320
CCGCTACAAT
1380
ACGAAGAAAT
1440
TGGCTCCTGC
1500
TCGTTCCTCA
1560
CGGAAATCAG
1620
AAATACACAG
1680
GAAAGGATTT
1740
ATTCCTTTGC
1800
GTGCAGAGTA
1860
CAACGCCCTA
1920
TTTTTTATAA
1961
AACCCAATGC
CGGAACCACG
TGCCCAGCAG
CTGTGTCTTG
AGCCGGGGCT
TCAGAAATAC
GAGCCCCATC
GCCTCTCGGG
GCAGGGCTAC
GAATCCT'ITC
GATCCTCGAT
CCGCGGACCC
CGATGAAGAA
CTTCATAGTC
TGAGCTGGAA
AAAGCACGAG
CGAGCAGGAA
AGTTTACTTT
GAGAAGCAGA
CGATAATTAT
AGCGCCCTAT
CACTCTTGCG
ATTTACTGCA
CCGGCCGTGA
GGGCTCCCCA
GTCGATGGTG
CCTCTTTTCC
GCGACCCTGA
AAGGTTACCG
GTTTCCCAGT
AAGGAACTCG
GGCATGACAG.
CCCGTCAAAT
ACAGAAACTG
GAAATAATGA
GGCTGGCTCC
GACAGAGTAA
GCTTTACTTG
GAGGCGGGCG
ATCAAGGAAT
GTGGATGCGA
CTGGCAGCAA
AGGATTCCTT
AAGGAGAGAG
ATCGCTTTCA
CTTCTCGTTC
CAATCCACCC
AGGGCGTGAT
AAAATCCCAA
ACATCTATTC
TTATGCAGAA
TTGCCCCAAT
ACGATGTCTC
AAGATGCCCT
AAGCAGGCCC
CTGGCTCCTG
GCGAGTCTCT
AAGGATATAT
ACACAGGCGA
AGGAGAT TAT
TTGCTCATCC
AGGTTCCGGT
TCGTGGCAAA
TTCCTAAGTC
AATGAAAATG
TCTGTTCACT
AGAGCTTATC
ATATGCATAT
GGACGATGTC
GTTAACGCAC
TCTGTATTTC
TCTCAATTCG
ATTCAACCTC
TGTGCCTCCA
GGCCGTCCGG
CAGAGAGCGT
GGTGCTGGCA
.CGGAACAGTC
CCCGCACAAT
TAACGACCCG
CGTCGGGTAC
CAAATATAAG
GTCAATCGCT
GGCGTTCGTG
GCAGGTGATT
GCCGTCCGGC
AATTTCCATA
TCTATTTATA
AATTGTATCA
TACTATAAAC
PCT/NZ97/00112
GTGGCGTTGC
AAAGGCCTGG
CATTCCGATG
GTTCTCCTCT
ACGACCTGTC
ATTGTCCTGG
ATAATCATGT
TTTCCCAAGG
ATGAACCTAG
GTCCGGAACG
CAAGCCGGCG
GAATCCACGG
ATTGACGATG
GGCTTCCAGG
GACGCAGCAG
GTGAAGTCGT
TTCTACAAGA
AAGATTCTGA
TGATTCTAAG
TAATAAAGTG
TATGGATTGT
GATATATGTT
INFORMATION FOR SEQ ID NO:57: Ci) SEQUENCE CHARACTERISTICS: LENGTH: 1010 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: GACAAACTTG GTCGTTTGTT TAGGTTTTGC TTGCAGCATT AAGCAAAGAA GATGAGTTCA 120 TTCCAGAGAA TATAAGTCTT TTCCAGTTTG 180 AGGTGGCCCT CGTGGAGGCC TCCACAGGGA 240 SEQ ID NO:57: TGCAGGTGAA CACTAATATG GAAGGCCAGA TTTTTCACAG CCCTTTTCCT GCAGTACCTG TTCTGGAAGG TGCTGAGAAA TACCGTGATA AGGAGTACAA CTATGGTCAG GTGATTTCGC WO 98/11205
TCACAAGGA.A
300
TTGTTCTGCT
360
GCGCAGTGTT
420
AGGATTCTGG
480
TGAAACTGCC
540
AAATTTTTGA
600
TGTGTGCACT
660
ACAGAAATCT
720
GAAATTTCAC
780
GTTGCGCCAC
840
ACTTTATCAG
900
TGCTCTCCCT
960
TCCAAAGCTG
1010
TGTTGCAGCT
TCCAAATATG
TTCTGGGGCA
AGCAAAGATT
TGTTATTATT
GAGAAACTAT
CCCTTATTCC
GATTGCAAAT
CACGTTGGGG
TCTTCGCAAC
TTCTTTGATT
CCGGTTTAAA
TTCATGACTG
GGGCTCGTGG
GCAGAATACC
AATCCTTCTG
GTTGTGACAG
GCAGATAACG
GAGGCCGCAG
TCTGGCACCA
CTGTGCTCTA
CTGATGCCAT
GGAGGCAAGG
ACTTATGAGG
AATCCTATCG
CGGCTGCTCC
ACAAAGGCAT
CCATTATTGT
CACACATCAA
TTGGGTCTGC
AGCATGTCAT
GGCCTTTTGT
CAGGGGCCTC
GCTTGTTTGA
TCTTTCACAT
TCGTGGTCAT
TCAACTTCGC
TTAACGAG TT
TCAAAAGGGC
GCTGGGAATA
TGAAGTTGAA
T TAATGAGAAG
GAACACAATT
ACAAATTTGT
TAAAGGTGTC
TGTCCATGAA.
ATATGGCATC
GTCCAGATTC
GCCTATTGTC
CGATCTCAGC
PCT/NZ97/OO1 12
GATGTTGTAT
ATGTTGGCCG
AAACATATCC
GTGAGGCAAG
CCATTGCAGG
CAGGATGATC
ATGCTCACTC
TCTCTTGTAG
ACGGGCATCT
GATCTCCGAC
CCGCCTATAA.
CGCTTGAAAC
ACTGGCGCCG GATCTACTGC INFORMATION FOR SEQ ID NO:58: SEQUENCE CHARACTERISTICS: LENGTH: 741 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: SEQ ID NO:58: GAATTCGGCA CGAGACCATT
GTCAAAGGAG
120
TACCCAGATG
180
CGAGATTCTC
240
GCATTTGCCA
300 T TTAGTATAG 360
AACAAATACT
420
TCTTTGGA.AA
480
CCAAAATCAT
540
CAGTGAATAA
600
GTGTTAGTGA
660
AATCTTGATG
720
AAAAAAAAAA
741
ATCAAACAAA
TGAAATATAC
TTCCACATGC
AATTGTGGGT
TATGACGAGC
CACCTGTGGT
CCGCTTAGTG
GGCTGATGTG
TTTTGTTAGA
ACGGAATGAT
GATTGTGTCT
TCCAGCTAAT
TTTTGAA.ATT
CACTGTCGAT
TTCAGAGATA
TATAATCCTT
TAGGCACTGC
TTGTTTTCTT
TGGAATGCTA
AACTGGTTGT
GTGTTTAGAT
GTCAAATCTT
TTTTCAATGG
ATTGGCATAG CAATTGGTCA
GGACCTAATG
GAG TACCT CA CATAACAG TT
CGTAGGTGTT
AGATCCTTCA
TCTTTCTGGA
AGTACTAGTG
TCCAGAGGGT
CCATCTTTAC
GATGGGCTGA
TAAAAAAAAA
GTGTGGAGGC
GCAAATTTGT
TCAATCAATG
TGGCAGAACA
CACTTTTCTC
ACTTTGGTAT
TCCAGAGTTC
GTTTACAACC
AAGGCTATTG
CTGACTCTCT
AAAAAA
TTCTATCTTT
TAGTCAGCTA
GTGAAGTATG
TTTGTCCTAG
GAACCTCCTG
TTCCATAAGA
GGCAATAATG
TAAGGGAGTT
AACAGTTGTT
AGTAAGGTTG
TGTGATGTCA
INFORMATION FOR SEQ ID NO:59: WO 98/11205 WO 9811205PCT/NZ97/001 12 SEQUENCE CHARACTERISTICS: LENGTH: 643 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: SEQ ID NO:59: CTCATCTCGG AGTTGCAGGC TGCAGCTTTT GGCCCAAAGC ATGATATCAG
GCAGATGAAG
120
ATGGCTTGTC
180
CCCAGCTGAT
240
GCTTGAGCTT
300
TTGCCACGGT
360 ACCAGCAGT1C 420 CGTTGTTTTT1 480
GATTGTCCAT
540
TGCTATGCAA
600
GAGCTTGCAG
643
CAAACGGATC
AAGATGCTCC
GATAGGTGGA
GTGAA.AGCTG
GTCTTTCACA
GAAGGGACGA
ACTTCTTCCA
GATGACTGCT
AAACCTTGGC
TGATAAATCC
AAACAGTTTG
TCATCAGAGG
AGTATGAGCA
ATATTCTCCA
TGGC"ITCAGT
GGAATGTGAT
TCGGCGCAGT
GGAGCGATTT
AGAGAAATCT
AGGCCTGGCC
CGTTACTGGA
TTACACTGTC
TCTGCGAGAG
TTACCAGAGC
TCTCAATGAT
GGAGGCCTGC
TTACATGAAT
GACTACTGCG
GCATGGGATA
TTAGGTCCCT
GCAGCGGGTT
AGAGCAGCAG
TTGGAAGGAG
T.TACTCACAG
GACCCTGAGC
GCAGAAACTG
CCTCATAGAG
TACAAACCAA
TTGCTAAGCG
TGA
ATCAAACGAC
TCATTGCCTC
TTCGGACCAA
CA AAAGAGAG
TCATCAGAGG
AAGTGATAGA
GGGTGAAGCG
ACCCGCTCGC
GAATTGGTAT
AAGGAATTTA
INFORMATION FOR SEQ ID SEQUENCE CHARACTERISTICS: LENGTH: 441 base pairs TYPE: nucleic acid STRANDEDNESS: single (ID) TOPOLOGY: linear (X4)
GAATTCGGCA
ACGATGTCAG
120
TGGCATCTTG
180 G GGAT CC TG C 240
GACTGCAACT
300
GCTGCCATGG
360
TATGGTATGC
420
ACCATCTGGA
441 SEQUENCE DESCRIPTION: CGAGAATTTT TCTGTGGTAA CATAACAAAC TCCAAAGGAT GCTTATCAAG CGTCTCCTCC CAATGAGAAA AAGATGGCTC AATGAAAGCT GATTTAATGG TGTTTTTCAC ACAGCGTCTC TCTGGCCAAG ACTTTAGCAG CATGGTTGCA G SEQ ID NO: GCATATCTAT GGCTCAAACC TGGTATGCGT GACAGGAGCG AGTGTGGTTA CCAAGTGAGA ATTTATGGAA GTTAGATGGG ACGAGGGCAG CTTCGATGAG CAGTCGTGGG TGTCAAATCA AAAAAGCAGC ATGGGATTTT
AGAGAGAAGG
GCTGGTTACT
GGAACTGTGC
GCGAAAGAGA
GTCATCAGAG
GATCCCAAGA
GCCCAAGAAA
INFORMATION FOR SEQ, ID NO:61: Wi SEQUENCE CHARACTERISTICS: LENGTH: 913 base pairs TYPE: nucleic acid.
WO 98/11205 WO 9811205PCT/NZ97/001 12 STRANDEDNESS: single TOPOLOGY: linear (xi)
GAATTCGGCA
CAGGATCCTG
120
AATCCTCCGG
180
TGGCTCATCA
240 GGTAATCC7S 300
CTCTGGAA:-AG
360 GGTGTTT-'r- 420
ATTAAGCC;A
480
GTGAAGCGAG
540
ACACCAGGCA
600
AAAATGACAG
660
TTTGCAGAGG
720
TTCATTATGC
780
GAACCCCACT
840
TCACATATCT
900
GATGCTACCC
913 SEQUENCE DESCRIPTION: SEQ ID \.1:61: CGAGGAAAAC ATCATCCAGG CATTTTGGAA A7TTTAGCTCG
CAATGGCTTT
TCCATCGAGG
TGCGATTGCT
TAAAGACAAA.
CAGATTTGGA
ATGTTGCCAC
CAATCAACGG
TTGTTTTCAC
AAGTTTTTGA
GATGGATGTA
AGAACAAGAT
AGACCATGCC
ACATGATACT
TTGTATATGA
ATT
TGGCGAAGAG
AACAGTGTGC
TGAGCGAGGA
GCATCTGTTG
TGATGAAGGA
TCCCATGGAT
GGTCTTGAAT
GTCATCTGCT
CGAATCATGC
CTTTGTATCG
CGATCTCATT
ACCGAGCATG
GAGACAGGTA
ACATCCTGAA
CAGACTGCCT
GTTACAGGAG
TATAGTGTTA
GAT CTGC CGG AGCTTTGf.ATG
TT.CGAGTCCG
GTTATGAGAT
GGGACTGTGA
TGGACCAACC
AAGACATTAG
ACTCT TAT CC
ATCACAGCCT
CAGCTGCTTC
GCAAAGGGCA
TGCCACAAGA
CT'GCTGGGTT
GAGCAACTGT
GGGCAAATGA
CTGCCATTGA
AGGATCCCCA
CGTGTGCAAA
AT TTACAGA
TGGATCTTTG
CAGAGAAAGC
CCACATTGGT
TGGCACTGTT
ACTTGGATGA
GATACATCTC
CCCCTTGATT
AACGCCTTTG
CATACGGTCA
GCGAGACACT
GAGATTGACT
TGCTGTCAG
CAATGAC-ATA
AGCCAAGT-C
TGATTTCCAII.
CAGAAAA.L
TGCTTGGGAT
CGTTGGACCA
AACCCGGA.AT
TCTCTGTATC
TTCCACATGT
INFORMATION FOR SEQ ID NO:62: (iJ) SEQUENCE CHARACTERISTICS: LENGTH: 680 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (x i)
GAATTCGCCA
ATTGATCAGT
120
AGATGAAGCA
180
CGGCTCTTCG
240
GGACCCAGAAZ
300
GCTAA.ACCTZG
360
TTGTCAAGGG
420
GGAGCTTG:T
480 SEQUENCE DESCRIPTION: CCAGATCAAT TTTTGCATAT CACAGAGTCA TGGCCAGTTG TGCGAAGAGA ACAAGAGAGT CTGGTCATGA GATTACTGGA CACACAGGGA AGCTTGGGCA TTCAAGGCAG AGCTTAACGA GTTTTCCACG TTCCCAAGCC CGTCCTGCCC TGAGGGGAAC SEQ ID NO:62; TATTAAAAAG TAAGTGTATT TGGTTCCGAG AAAGTAAGAG GCTTTGTGTA ACTGGGGCAA ACATGGCTAT TATGTTCATC TTTGCTCG CTCCCAGCGC CGA.AATGGCC TTTGATGATC TGTTAATCTG GACTCAAACC AGTAAATCTG CTTCGACCCT CC TT CTC TAT
GGTTGAATGG
ATGGGTACAT
GAACTGT TAG
CAAGTGAGAA
CTGTGAGCGG
CTCTTCAGGG
GCGAACGCATC
WO 98/11205 WO 98/ 1205PCT/NZ97/001 12 GGGCACTGTG' AAACGAGTGA TACATACCTC 540 ACCTGACCCC CCTGATACTG TGCTGGATGA 600 AAAGACAAAG ATGGTCGGAT GGATGTACTA 660 CCATAAGTTC GGATCAGAGA 680 O TCCGTTTCA GCAGTGAGAT :7CACTAGGGALA ATCTCATTGG ACTTCGGTCG AGTATTGCAG CATCGCCAAC ACTTATGCAG AAGAGGGAGC INFORMATION FOR SEQ ID NO:63: SEQUENCE CHARACTERISTICS: LENGTH: 492 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: GAATTCGGCA CGAGGCTGGT TCAAGTGTCA
AGATTTCAGA
120
GAGCTGCTGG
180
TTAGAGGAAC
240
CTGGGGCGAA
300
ACGCCGCCAT
360
CCGAGGACCC
420
GATCGTGTGG
480
TGCTTTTTAC
492
AGAGCTGCTA
CTTCATAGGA
TGTGCGAGAC
TGAGAGGTTA
TGATGGTTGT
CGAGAACGAG
GAAAACCAAG
GG
AATCATGAGA
T CAT GGCT CG
ACTGGTAATC
ACTCTCTGGA
GAGGGAGTTT
ATAATTAAAC
TCTATGAAGC
SEQ ID NO:63: GCCCAAGGC 'C.TCCCCTACA TCCATCAAGG AAGTACAGTA TCATGCGTTT GCTTGAGCGA CGGTGAAGAC GAAGCATCTA AAGCAGATTT GGATGATGAA TCCATGTTGC CACTCCCATG CCGCTGTCAA TOGGATOTTG GAGTTGTTTT CACGTCGTCT
GAGAATCCCC
TGT GTGACAG
GGATATACTG
TTGGATCTGC
GGAAGCTTTG
GATTTTGAAT
A.ATGTTTTGA
GCTGGGACTC
INFORMATION FOR SEQ ID N0:64: SEQUENCE CHARACTERISTICS: LENGTH: 524 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
GAATTCGGCA
TCCAAGCTTT
120
GGCTTCATAG
180
ACAGTTCGCA
240
AACGAAAGAC
300
GTAGATGGTG
360
CGCTTGAAGG
420
TGTTCAAGAT
480 SEQUENCE DESCRIPTION: CGAGCTTGTT CAAAGTCACA TCGTCTACCT CCCTGAAAAG CTGCTTATCT CATTCGTAGT ACCCAGATAA -TOTGGAGAAG TCAACATCGT GAGAGCAGAT TAGATGGAGT ATTCCATACT AAACCCTAAT AGATCCTTGT CACCTTCAGT AAAGCGGGTG SEQ ID NO:64: TATCTTATTT TCTTTGTGAT ATGAGCGAGG TATGCGTGAC CTTCTCCAGA AAGGTTACAG TTTAGTTATC TGTGGGATCT TTGCTAGAGG AAGGCAGTTT GCATCACCTG TCTTAGTCCC GTGAAGGGCA CTATCAATGT GTGCTTACAT CCTCCTGCTC
ATCTGCAATT
AGGAGGCACA
AGTTCGCACT
GCCTGGTGCA
TGATGCAGCA
ATATAACGAG
CCTCAGGTCC
ATCAATACCG
WO 98/11205 WO 9811205PCTNZ97/OO1 12 ATACGACTAT AATAGCTTAG AGCGTTCCCT GCTGGACTGP% GTCA 524 INFORMATION FOR SEQ ID N0:6S: Ci) SEQUENCE CHARACTERISTICS: LENGTH: 417 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
TCCTAATTGT
GTTIGTTCATG
120
ATAACGAGAG
180 TCTG GAC C CC 240
AGGTTTGTGG
300
GAGAGACGCT
360
CTATGCAGAIT
417 SEQUENCE DESCRIPTION: TCGATCCTCC CTTTTAAAGC CAGTGCTAGC AGGAGGAGCA GACAGAAGTA AGTTTGTGGA TCTGAGGACA ATGGCAAGCT ATTGTTCAGG GCCTTCTTCA GGCGAGGTTG AGTCTCTCAG GTCTTGGATT ATCACAGCAT SEQ ID N0:65: CCTT'CCTGG CCTTCATTCC GCGTTrGCAAT TGGGGAAAAT AATAGCAA_'CC ATGCCGGTGT CGTTTGTGTC ATGGATGCGT ACGAGGCTAT TCAGTGCATG AAAATTGCAT GGGGATCGAT TACTGATGCG CTCAAGGGCT
AGGTCACAGA
T CCA A A 2,
TTCCTTCTIGG
CCAGTTATGT
CCACGGTGCA
TGCAGATCTT
GTTCTGG
INFORMATION FOR SEQ ID t4O:66: Ci) SEQUENCE CHARACTERISTICS: LENGTH: 511 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
ATGACACGAA
CTTCATTCCA
120
TGAAGAAAAT
180
GAGTTTCCTG
240
CGCAATTCCG
300
GGGGAAGCTG
360
CAATGGTTGC
420
GGAGTATCCG
480
GAATTTAAGG
511 SEQUENCE DESCRIPTION: TTTGTGCCTC TCTCTGACCA TCATCCAGGA GCTTCTGTTA GGATACGGCG CTTCCAATTC GGGATTCATA TCGCAAGAAT GTAACGCCAG AAGAGGCAGG GAGATATGCO AAGCCGATCT TCCGGAGTCT TCCACGTCCC GTATGATTAG TTTAATAGAT TTTTCTTAGA ATTTGGATAC SEQ ID NO:66: GAGCTTG-AAG CTCTCGTCTTC .TATCCAT TTC CTCAAAATGG TCGGAAATTA ATGTGCCTTA GCTGCTCGGC CGGGGTTACT CTCACTTATG GAATCCGAAG CTTGGATTAT CGCAGCGTTT TGCGCCCTGT GATCATCTGG TGACGGGGTA TCCTGTATGA
T
TCTGATATCG
ATGCCTACCT
CCGGGGGCTG
CAGTCCGTTT
AAGCATTATC
TCGGCAACAT
ATGGATTACA
ATTAGTTTAT
INFORMATION FOR SEQ ID NO:67: SEQUENCE CHARACTERISTICS: CA) LENGTH: 609 base pairs TYPE: nucleic acid STRANDEDNESS: single D) TOPOLOGY: linear WO 98/11205 WO 98/ 1205PCTNZ97OO1 12 SEQUENCE DESCRIPTION: SEQ ID NO:67: CATTGATAG: TGATGGAAGA CCATCAGTAA AGCATGAAAA AGAAATTGTT
GAAGTCAGTT
120
AATATGTAAT'
180 C TGAC C TT Ca 240
AGTGGCGAAC
300
GAGGAACAGG
360 CATTCCTTc: 420
CC'TTCAAGGC
480
TGGAGGCAAPT
540
TTCAAACAGG
600
TTTGGCCAA
609
GCTCCAGCAG
CCATAAACTT
CATATTTATT
CAACTT GACA
CTACATTGGT
TGTCAGAGAG
CTCAGGT GCT
CAAGAAAGTT
AT AT TTAT CC
AACCTTTTTA
ATGCAGGAAG
CCAATTCTAA
GGGTTGGACA
C-GTCATATAA
AC CT CCCCT T
ATTATACTCC
GATGTAGTTA
AGGO TAT TTA
GCAATTGTTT
TGCCTCGTGC
TATCTCTACT
TGC-CCAACAG
CCAAAGCCAG
CTAATCCTGA
ATGGATCTTT
TCTCGGCTGT
AA.GGGAGGGT
T TGTATCCTT
CGAATTCGGC
CGCTGTCTAC
CAGCAAGATT
CCTTGCTCTT1 GA AGGCTAAG
GGAGGACCAT
CAAGGGACCA
T GGAACCCAT
CCAAGGTGJX
TTTGCCTTTG
ACGAGAATCA
CTGATTTTTC
CTGATTATTG
GGTCATCCCA
CTTCTGGAAT
GCAAGTCTTG
CAGCTGACGG
CAAGAAGGGT
INFORMATION FOR SEQ ID NO:68: Ci) SEQUENCE CHARACTERISTICS: ()LENGTH: 474 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: GCAAGATAGG TTTTATTCTT CTGGAGTTGG
GCATAGCA.A:
120
GCTCTATGTA
180
TGCAGCAAAT'-
240
GGTGATGGGA'
300
TCATCCTACC
360
CGTCCAACAA:
420 C CTC TTAG TA 474
TAAGCAGTTG
GCTGCAGACA
TGTGAGATGG
GCCACAGGTT
TATGCTCTTA
TTGAAGGATG
AATACATTGA
CAGCCATGGC
TGGTGGAAAA
AGAAGCCTCT
ACATTGGCCG
TACGCCCGTT
CCGGGGTCCA
AGGACATGGG
SEQ ID NO:68: GTGAGGCTTG GAAATTTAAG GGTCTGTGGA ACTGAAGTAG CAACACGTCT ATTGTGACCA TCTAAATTCC TCTGCCACCT TTTTGTTGCC CAAGAAGCTG TGCTGCTTGT GACCTGGCCA TATCCTTTAT GGGTCTTTGA CCGTTGTTAT CTCTACCATT
TAAAAAGGGT
CTCATACTGT
CCTCTATGGC
CAAGAATAC T
TTGCTGCTGG
AAGCACAGCG
GTGATCACAA
GGAG
INFORMATION FOR SEQ ID NO:69: Ci) SEQUENCE CHARACTERISTICS: CAt) LENGTH: 474 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear SEQUENCE DESCRIPTION: SEQ ID NO:69: WO 98/11205 WO 9811205PCT/NZ97/00112
GCAAGATAGG
GCATAGCAAT
120
GCTCTATGTA
180
TGCAGCAAAT
240
GGTGATGGGA
300
TCATCCTACC
360
CGTCCAACAA
420 C CT CTTAG TA 474
TTTTATTCTT
TAAGCAGTTG
GCTGCAGACA
TGTGAGATGG
GCCACAGGTT
TATGCTCTTA
TTGAAGGATG
PLATACATTGA
CTGGAGT:T3G
CAGCCAT'-GC
TGGTGGA.AAA
AGAAGCC:'CT
ACATTGGCCG
TA'CO CC C CTT
CCGGGTCCA
AGGACAT!C CO C TG'GGCTTG
GGTCTOTGGA
CAACACGTCT
TCTAAATTCC
TTTT:GTTGCC
TGCTGCTTGT
TATCC'TTTAT
CC G1T GT T AT
G-.AATTTAAG
ACTGAAGTAG
ATTGTGACCA
T C TO CAC CT
CAAGAAGCTG
GtA-CCTGGCCA
GGGTCTTTGA
CT CTACCATT
T.;AAAAGGGT
CTCATACTGT
CCTCTATGCC
CAAGAATACT
TTGCTGCTGG
AAGCACAGCG
GTGATCACAA
GGAG
INFORMATION FOR SEQ ID N0:70: SEQUENCE CHARACTERISTICS: LENGTH: 608 base cairs TYPE: nucleic acic STRANDEDNESS: sinale TOPOLOGY: linear (x i)
CATTGATAGT
GAAGTCAGTT
120
AATATGTAAT
180
CTGACCTTCA
240
AGTGGCGAAC
300
GAGGAACAGG
360
CATTCCTTCT
420
CCTTCAAGGC
480
TGGAGGCAAT
540
ATCAAACAGG
600
TTGGCCAA
608 SEQUENCE DESCRIPTION: SEQ ID TGATGGAAGA CCATCAGTAA
GCTCCAGCAG
CCATAAACTT
AATATTTATT
CAACTTGACA
CTACATTGGT
TGTCAGAGAG
CTCAGGTGCT
CAAGAAAGTT
ATATTTATCC
AACCTTTTTA
ATGCAGGAAG
CCAATTCTAA
GGGTTGGACA
CGTC AT A -AA
ACCTCCGCTT
ATTATACTO-C
GATGTAGTTA
AGGGTATTTA
AGCATGAAAA
GCAATTGTTT
TGCCTCGTGC
TATCTC TACT
TGGCCAACAG
CCAA'AGCCAG
CTA.ATCCTGA
ATGGATCTTT
TCTCGGCTGT
AAGGGAGGTT
AGAAATTGTT
TTGTATCCTT
CGAATTCGGC
CGCTCTCTAC
CAGCAAGATT
CCTTGCTCTT
GAAGGCTAAG
GGAGGACCAT
CAAGGGACCA
GGAACCCATC
CCAAGGTGAA
TTTGCCTTTG
ACGAGAATCA
CTGATTTTTC
CTGATTATTG
GGTCATCCCA
CTTCTGGAAT
GCAAGTCTTG
CAGCTGACGG
AAGAAGGGTT
INFORMATION FOR SEQ ID NO:71: SEQUENCE CHARACTERISTICS: LENGTH: 1474 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: SEQ ID NO:71: GAATTCGGCA CGAGAAAACG TCCATAGCTT CCTTOQCCAAC TGCAAOGCAAT ACAGTACAAG AGCCAGACGA TCGAATCCTG TGAAGTGGTT CTGAAGTGAT GCGAACCTTC GAATCTGAAA 120 WO 98/11205 WO 9811205PCT/NZ97/001 12
AAACTGTTAC
180
ATCTCAGAAA
240
ACTCTGATTT
300
GGCATGAA-
360
GAGAGCATGT
420
AGAGCATGGA
480
GCACACCTAC
540 GAAtCCCGGA 600 TTTTCAGC1C 660
GTTTAGGAGG
720 CGGT TAT CAG 780 CTTATCTTG7T 840
TAATGGACAC
900
ATGGAAAGCT
960
TAATACTTGG
1020
AAACTCTAGA'
1080
ACTACATCAA
1140
TGGATGTTGC
1200
TGCATGCAAG
1260
ATTTAGGAAC
1320
TTCAGATGTT
1380
TCCAATGTCT
1440
AAAAAAAAAA
1474
AGGATATGCA
GAAAGGACCT
AGTTCAAATG
GGTGGGGATT
AGGGGTTGGT
ACAATACTGC
TCAGGGCGGA
GAATC".TCCT
AATGAAG CAT
CGTGGGGCAC
TTCGTCTGAT
TAGCAAGGAT
CATTCCAGTT
AGTGATGCTG
GAGAAGGAGC
TTTCTGTGCA
CACGGCCATG
TAGAAGCAAG
ATGAATAGAT
TCGATACTGG
TTTTTAACTT
TCTGCCAAAT
GCTCGGGACT
GAGGATGTAA
CGTAATGAAA
GTAACAGAGA
TGCATTGTTG
AGCAAGAGGA
TTTGCAAGCA
CTGGAACAAG
TTCGCCATGA
ATGGGTGTCA
AAAAAGAAAG
ACTGAJAAAGA
GCTCATCCTC
GGCGTTGTTC
ATAGCTGGAA
GAGAAGAAGG
GAAAGGTTGGQ
TTGGATAATT
CTGGACTAGT
TTTTTGTTAC
GTATATGTAA
TAATATATGT
CCAGTGGCCA
TTGTAAAGGT
TGGACATC-TC
TTGGCAC-CGA
GGTCCTGTCG
TTTGGACCTA
GTATGGTGGT
C GGCC C CTC T
CAGAGCCC-GG
AGATTGCCAA
AAGAAGCCAT
T GATGGAAGC
TGGAACCATA
CAGAGCCGTT
GTTT CAT TGG
TATCATCGAT
AGAAGAACGA
AGTCTGCAAT
AGCTTAACAT
TTTAGTTTAG
AGATCAATTT
ATTCGTATTT
AAAA
CTTGTCCCCT TACACTTACA CATTTACTGC GGAATCTGCC TCATTACCCA ATGGTCCCTG GGTGAAGAAA TTCAAAGTGG CAGTTGCGGT AATTGCAATC CAATGATGTG AACCATGACG TGATCAGATG TTTGTGGTTC GTTATGTGCA GGGGTTACAG GA'-AGAAATGT GGGATTTTGG AGCCTTrTGGA'CTCCACGTGA GGAAGTCCTC GGCGCCGATG AGCAGAGAGC CTAGATTACA TCTTGCCCTT CTGAAGACAA GCACTTCGTG ACTCCTCTCT CAGCATGGAG GAAACACAGG GATTGAGGTT GTGGGCCTGG TGTCCGTTAC AGATTTGTGG CAATCAATCA GATCAATGCC GAAAGGGAAA TTAAATTTTT CTTTTGTGAG GTTGAAACAA CTCGTG-ACAG TAAATAATA-A TTATATGAAA. AAAAAAA INFORMATION FOR SEQ ID NO:72: Wi SEQUENCE CHARACTERISTICS: LENGTH: 1038 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: GAATTCGGCA CGAGAGAGGG TTATATATCT TGCCAAGCTC TGGGCCACGG ATTTGGAATC 120 GGCGAATTTC ACAAAGTATT TCACCGATAA 180 CTTTGAGGGA AAAAAACCCT GCTACTTCAA 240 SEQ ID NO:72: TGATTCTGAC CTGATTGTCG TCGACGACAT TCGTGTCCTC GGGGCACCAG AGTACTGCAA TTTCTGGTGG GATCCCGCAT TATCCAAGAC CACAGGCGTA ATGGTGATCG ATCTTGAAAA WO 98/11205 ATGGCGGGCA GGGGAATTCA 300 CCGTATCTAT GAGCTCGGAT 360 GCAAGTCGAT CATCGTTGGA 420 CCGAGATCTT CACCCTGGAC 480 GCTACGCCTG GAATGCCAAG 540 TTTATCGATC AACGTATTAC 600 ATCGAATTAA ACCTGATTTG 660 GTTTTGAATT TCAATTCTGG 720 CAAATCCATC ATGAGGGACC 780 CGCCTGTGAA GAATGATATT 840 CAGCCAGCAG AGAGGCAAGC 900 AATTTTCGGC GACTGTACAG 960 CCTGAACCAA CAACTGTATA 1020 AAAA~AAA AAAAAhAAA 1038
CAAGAAAGAT
CAT TACC GCC
ATCAGCACGG
C-TGTCAGTTT
CGGACTTGCC
CTAAATGGGT
ATAAAATGCC
TAACGAATAG
AATCGTTTGA
GTGGACTGAT
AATGCCGCTG
CGATGTAAA'TT
ATACCTTATA
CGAAATC-IGG
ATTTTTACTG
TTTAGGCGGA
GTT GC AT T GG
CTCTGGATAC
GAGAGAGCCT
AAATAGAACT
AAGAAAACAA
ATTTAGTATT
CTATTTATAT
CAAGTCATGT
T TTGGAACAT
AATGTATCTG
AJGGACATAC
GTA'TTT.GCTG
GATAATTTGC
AGTGGT3AAGG
TTTATGGGCT
CTCTCCTCGG
T TACGCC TAT
TAGCACAGCC
AATAAGGTTG
TTGTACTGCC-
AGGGAAGGCG
TAATATCATT
CAACTCCATT
PCTNZ97/0O1 12
.!GAAGGAACG
rGTTTGGTTAA
AAGGCCTTTG
GCAAACCTTG
C-CTTATGATC
GGJTGCTTTTT
GCATCTTTCA
ACAGGCAGGJA
-:TCCATATAA
AZTGCCATCCT.
TTGTGAACT C .a.TGATAAGTT
'TGCATAAA
INFORMATION FOR SEQ ID NO:'73: SEQUENCE CHARACTERISTICS: LENGTH: 372 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) CTAGGGG TCT
CATGCAAGAG
120 GTCCTTT TAG 180
CGGGAGGAGG
240
CCATCGGAAT
300
TGGGCAATTC
360
AAATCTGCCA
372 SEQUENCE DESCRIPTION: TGGGGGGTTC CTGATGCCCA ATCTGTAGTC AGTAGTCTTG GGTAACATCA TTCCAACCAT AGCAAGATAT TCAGCATTGC TCAGCCGAGC TCGCCCCCTC TGGCTCGAAA TCGCCAAATT
GT
SEQ ID NO:73: ATTGTTGCTG TGCTTGG-AT TTGGATCTAT AGCTTT-TAGA ATCCAGTTCC ACCACCGGCT TTTGGGCACC AGATGGATAG AGTCCAATCG TCGTGAAAAT ATGGGCTACA ACAGGATTAA GAACCCAkAA
AAAGAGTCAC
ACACCTTCAA
GCATTATTTT
CCCTCAAAAT
AATTGCACAG
INFORMATION FOR SEQ ID NO:74: SEQUENCE CHARACTERISTICS: LENGTH: 545 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: SEQ ID NO:74: WO 98/11205 WO 9811205PCT/NZ97/0O1 12 AAAGAATTC'G GCACGAGGGC AATCCGAGCC TAGCCA.ACCA ACTTGGCAGC AGGAGCACA
GGGAGTTGGC
120 C CAACAAGC C 180
ATCCTGATAA
240
GAAACATAAC
300
CTGAAGTGGT
360
ATGCCATTGT
420
TGACCATTCC
480
TTGTAATCTT
540
GTTTT
545
GAGAGAAGCT
TTTGCTCCCT
TCTGGGT TAT
CGTAGGAACT
TTATGAGCAA
GGTTGTGGGT
CCTAGGCGGA
GATATCTGGA
GTTAGGAAAT
TTGGAGAAGA
CAGTGTGGTG
ACAATTCTGG
AATCCAGATG
GAGGCACCAT
GGGGACACGA
AGGCCACTTG
C 'TTTGGTA T 1
ATGCTTCICAA
GATGGACGAT
AAGCTATCAA
CTAACTATGT
ACGCAGAAAC
TTAGACGGT
TTATTGAACC
'QTTGAAAAAT
GGTTCTTGTT
GGAATGGCAA
ACTAGCTGTC
CAAAGGACAA
GTTTGGAGAC
C TGTG CC TCC
TTATCTTCCA
'GAAGTCAG
GCAGGAA CCC 2GATTAAGTG A %GCCCCTCTA
CGGTTTT'OAT
A-ATCTTAATT
:TGAAA.TrCC
:TCGGTGGATC
INFORMATION FOR SEQ ID N0:75: SEQUENCE CHARACTERISTICS: LENGTH: 463 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
GCAGGTCGAC
CTAGTGATGA
120
TGTAGAGCCT
180
CGGTGGATTT
240
TCGTGCTTTT
300
ATATTTTTCT
360
CTGCACTGCG
420
ACATAGTACC
463 SEQUENCE DESCRIPTION: SEQ ID ACTAGTGGAT CCAAAGAATT CGGCACGAGA AAAAACAAAT GCTTTACGTA TACCTGGCCT TTTATACATG GATCTGAGTT TTTGTTACTC TGTATCACTG GGACTTGCCA CAAGCTCTGG CGTAGCAAAA AAGTTGTGGA TGACTTT'UGC ATATTCTCAG GGAGACCGTCu TGAAGTACTG GGTAACTGTT AACGAACCGT TACGATGTGG GGCTTCACGC ACCGGGCCGC TGTTCGCCTG GGAAATTCAG CGACAGAGCC TTATATTGTA GCCCATAACA GCTGTTAAAA ATATATAGCA*TAAATACCCA
GGG
CT TAGCTAGC
TTTATGCAGG
AGGACGAATA
t-AGAATGCTT
TGATCTTCTC
GATTTGGAAA
TGCTTCTTGC
INFORMATION FOR SEQ ID NO:76: Ci) SEQUENCE CHARACTERISTICS: LENGTH: 435 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: SEQ ID NO:76: ACACTAGTGG ATCCAAAGAA TTCGGCACGA GGCTACCATC TTCCCTCATA ATATTGGGCT TGGAGCTACC AGGGATCCTG ATCTGGCTAG AAGAATAGGG GCTGCTACGG CTITTGGAAGT 120 TCGAGCTACT GGCATTCAAT ACACATTTGC TCCATGTGTT GCTGTTTGCA CAGATCCTCG 180 WO 98/11205 WO 98/ 1205PCT/NZ97/001 12 ATGGGGCCGC TGCTATGA-A GCTACAGTGA 240 GATTATCGTT- GGCCTGCAAG GGA'-ATCCTCC 300 AGCTGGACAG TCAAATGTT- CAGCTTGTGC 360 CAAAGGTATC GATGAGAATA ATACTGTTAT 420 ATTACCCCCA ATTTT 435
GCA'CC~'AATTOTCAAGG
TGCTAATTCT ACA.AAAGGGG TAAGCAT'TT GT GGGTTATG CAACTATC:AA GGGTTATTTC C AT G AC TA rC:GCCTTTTAT! 2TGGAACAAc AACAT TCCAA INFORMATION FOR SEQ ID ,'JO:77: Wi SEQUENCE CHARACTERISTICS: LENGTH: 4511 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (x-4
GAATTCGGCA
TACAAAGG;A
120
CACTGCTTA:
180
TGGACTGG'A
240
ACTCCAATTS
300
AACACTATGG
360
GACACTTCCA
420
AAATTTGATT
451 SEQUENCE DESCRIPTION: CGAGCCTAGA ATTCTATGGT CAGTCCCAAA, TGGTTAAAGG TACATGTATG ATCCTAAACA TACAGGCTT.T GCATATGCTC GCTTTACATT GTGCCTTGGG AAATCCAACT ATGATTCTCT GCAGGACTGC ATGATACCAT AATGCACGTG AATGACCGGG SEQ ID \10O: 7: GAAAATC'TT GGGACAAGGC TTCA.ATAC-AC TATCTAGGCGu ACCTAAACAA AATGTAACAG GCAATGGAGT GCCTATTGGA GTCTATACAA GGCCGTCACA CTGAADAATGG AATGGACGAC CAGGGGTAAC TACTATAAAA 7GCCCAA.G:T
:TAACCA.ATA
-ATTACCAGAC
CCAAGGGCGA
T ACGTAAzA-AG
C-TGGAAACGT
GCTATTTGCA
2) INFORMATION FOR SEQ ID NO:78: SEQUENCE CHARACTERISTICS: LENGTH: 374 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear
CTGCTCTGCA
CTTGAGGAAA
120
CTTCAGAAAA:
180
GCTCCGCCGC
240
AGCTCTTAG-C
300
AGCTGCTA!CA
360
GACAGGAC;A
374 SEQUENCE DESCRIPTION: AGCAGTACTA TGCACAGCAA CGCTCAAGCA TTGCTGAGGC ATGGCAATGG CACAAGCATT AACATTCTGC CGGAGGATAA CTGCTCTCAT CAAAAGCCTT AATTCAACAA TTGTGTTGCA
TCTG
SEQ ID NO:7
GGCCTGCTTA
CACCGTTTAT
CAGAGGCCGT
AAGCTTTGGA
CATCTCTTTC
ATCTCGAAAC
ACTGAAAACA
CTAAATAGCG
GTCTTGCAAG
TCCGCTGCTT
TCTGTTGAAC
TTTTCTGCA.A
GAGCGCTGAG
CAACATAGGG
CTGCCCGTTT
C-TCCTAGACG
CGGCAT CC CCT A AGGTAAAAA INFORMATION FOR SEQ ID NO:79: WO 98/11205 PCTNZ97/00112 SEQUENCE CHARACTERISTICS: LENGTH: 457 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
GAAGAATGGA
TCATGTTTCG
120
AAGGCCCAAG
180
ACGGTGATGT
240
ATATGGGCGT
300
AAGGAGAGAT
360
AGAATGGA.T
420
GATGAATA-
457 SEQUENCE DESCRIPTION: AGAGATTAAT GGTGATAACG GATAGCAACT TCTGCTTATC CATCTGGGAC TCATTTTCAC AGCAGTGGAT CAGTATCATC GGCTACCTAC AGATTCTCGA CAATGAGGAA GGAGTAGCCT* CCAAGCGTCT GTCAACTTTG GCGGATTTCT GAGGCCAACC SEQ ID NO:79: CAGTAAGGAG GAGCTGCTTT AGTGTGAAGG AGCTGCCAAC GAACACCAGG CAAAATTCTT GTTATAAGGC AGATGTAAA.A TTTCATGGCC TCGTATATTT ATTACAATAA CCTCATCAAT TTTCACTGGG ATACTCCCCA
ATTGTGA
CCTCCAGGTT
GAAGGTGGAA
GATGGAAGCA
CTGATGAAAG
CCAAAGGGAA
GAACTCCTCC
GTCTCTGGAG
INFORMATION FOR SEQ ID SEQUENCE CHARACTERISTICS: LENGTH: 346 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (x4)
GGTGTGATGG
ATGCTGCACA
120
GGTTTCAAAT
180
GGCAAAGGCC
240
AATATTGGGA
300
AATACATGGG
346 SEQUENCE DESCRIPTION: CAGGAATTCC AGTCCTAAGG TTGTAGCTGC AGTAGCTTCA TTGGTGCAGG GTCATCTGCT CAAGCATTTG GGATACATTC TGTTGCAGTA GATCAATACC AATGGACGTC TATCGTTTCT SEQ ID CCATTTTGCA TCTGTTTGCT TTCAGTCTAC CCAAGGCTAG GTAGAAGCAG CTTCCCAAGG TATCAGGCGG AAGGAGCTGC TCATGAGGGT TCCCACACTC CAGGTAAAAT CGCTGATGGG ACCGTTATAA GGAAGATGTG CAGCTTCTCA CTATCTCCTG GTCACG INFORMATION FOR SEQ ID NO:81: SEQUENCE CHARACTERISTICS: LENGTH: 957 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: SEQ ID NO:81: GAATTCGGCA CGAGAAAGCC CTAGAA.TTTT TTCAGCATGC TATCACAGCC CCAGCGACAA.
CTTTAAC:C AATAACTGTG GAAGCGTACA AAAAGTTTGT CCTAGTTTCT CTCATTCAGA 120 WO 98/11205
CTGGTCAGG:
180
CTTGCACTCA
240 TGGAAGCTrS 300
TCAAGCAAGT
360
TGACCCTCTC
420
AACTCCATGT
480
ATGGGATGGT
540
ATATAGATAC
600
AGCAGATTTC-
660
ACATAGATGIA
720
TCATCTTCAA
780
TAGTACTGTG
840 A.AAAT CTC;A 900
TGACATTTGA
957
TCCAGCATTT
GCCCTACATT
TGTCAACACG
TTTGTCATCT
TCTTCAAGAC
TCTGCAGATG
GAGCT"TCAAT
TGCAATTCGG
GTGTGAT CAT
TTTTGATACT
GACTCGCTTA
GCT GAG TCCA
ATTTCTCGAT
GCAC CT CGAG
CCA-PAATACA
GATTTAGCAA
AACACAGAGA
CTTTATAAAC
ATAGCAAGTA
ATTCAAGATG
GAGGATCCTG
AGAATCATGG
TCCTACCTGA
GTTCCCCAGA
TATTCATTAC
GAAAGGATCT
GTCTAGTCTT
TGAACTACAA
CACCTGCTG T
ACAACTACAG
AGTTCAAGAA
GGAATATTCA
CGGTACAGTT
GTGAGATTTT
AACAGTACAA
CACTATCAAAk
GTAAGGTGGG
AGTTCACAAA
TTTCTATIGTG
CTCGGTATTA
GATTTTGATT
AGTTGCATGT
TGTjCCAAAGA
TAGTGGGAAA
TGATAGTAAT
GAGATTGACA
GGAGACTGCT
TGCAACCATA
AACATGTCAG
GAAGCTCACC
GAGAGAGCGT
TATGTAACAA
AATTGATAGT
TCACTTGACA
AT GAATGCGA
TA-AAAAAAAA
PCTINZ97/001 12
AATTTGAA.AT
ATTTCTGTAT
TTGGGGTTAG
CAGACATATC
AAGCAGGCTG
AATCAGAAAG
ATGACTGA.AT
ACAGTAGATG
TCAAGATTTG
ATGATGTAA
CTGTTAACAA
TGCCATCAA-A
CTTTTAGTTG
INFORMATION FOR SEQ ID NO:82: SEQUENCE CHARACTERISTICS: LENGTH: 489 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (x
GCAGGTCGAC
ATCCTCCA:-T
120
GGACTAGAGT
180
GCATCTTCAG
240
GCCAAGGTGT
300
CTGTCGAGIAG
360
CAGACAATCC
420
TGAAAATGGC
480
TACCAGTAA'
489 SEQUENCE DESCRIPTION: SEQ ID NO:82: ACTAGTGGAT CCAAAGAATT CGGCACGAGA TAAGACTAAT TTTCCAGACA
CCCATTCAAT
AAAAGT CCTT
CACAGACAGC
TGGAAACTAC
AAACACTGTG
AGGGGTTTGG
GTGGGTAGTA
TACACTGGTA
CCCTTTAACA
CACCCTGTCC
AATGAATCAA
GGAGTTCCCA
TTCATGCACT
AAGAACGGAA
CTCCACCCAA
CAACTGTTCA
ATCTCCATGG
CAGATGCACC
AAGGAGGTTG
GTCATTTGGA
AAGGGCCCAT
TA-ATACACAG
ATTGATTCTT
TTTCAATTTC
AAATTTTAAC
GGCTGCTATA
GGTTCACACA
CGATTTTCCA
GCTGTGAATG
CAAGACACCA
TTTGTGGTGG
CTCATTGACC
AGATTTCGTG
TCGTGGGGAC
CCCGGGTGGG
INFORMATION FOR SEQ ID NO:83: (i4 SEQUENCE CHARACTERISTICS: A)LENGTH: 471 base pairs TYPE: nucleic acid STRANDEDNESS: single D) TOPOLOGY: linear WO 98/11205 WO 9811205PCT/NZ97/001 12 (xi)
GAATTCGGCA
ACAGACATAC
120
TATTCCAACG
180
GAGGGAAGCT
240
AACAGTGCTA
300
TTCGTTCCTC-
360
TGTCCGGGGC
420
ATCATTTGTC
471 SEQUENCE DESCRI PTION: CGAGAAAACC T-T.TCAGACG TTCTCACTGC CAATCAGGCT GGCAAGGAGT TCCCTTCGAT CTAAGACTTC AACTCCAGTC CTAGCTTCGC TAATGGTCTT AGAGTGTGGA GGAGAATCTG AGTCTTGTGG AGGTCCAACG CCGCAACCAC TTCTTCCAAT SEQ ID NO:83: AATGTTCTGA TGCTCGGCCC ACAGGTAGAT ACTACATGGC AACACCACTA CCACTGCCAT ATGCCTAATC TTCCATTCTA AGAAGCTTGG GCTCACACGA TTCTACACCA TCGGTITTGGG GATCAAGATT TGCAGCAAGT CCTTCAAGCT CAGCATTTTG
CGGCCAGACA
TGCTCGAGCA
TTTAGAATAC
T. ACGACACC
CCACCCAGTC
GTTGATCAAA
ATGAATACAT
G
INFORMATION FOR SEQ ID NO:84: SEQUENCE CHARACTERISTICS: LENGTH: 338 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (x i)
GTTCGGCACT
ATCTCTTTCA
120
AATCAGTGCG
180
TTGCTGTAAC
240
CAGGCTATGC
300
CATGTACGTG
338 SEQUENCE DESCRI PT ION: GAGAGATCCA TTTCTTTCAA GGAATATATC GTGCTTGCAG TCTATCTTCT GCTCTCCTTG AAACGCAGAT GTCCACAATT AATAAGCGTA TAATCGCCAC ATGGAGACGT TGTTAATTAT SEQ ID NO:84: TGTTGAGACA GTGAGTAGTA TTAGTTTGAT GATCTTTAGT TTCTGCAACA ATGTCGTTGC TTTTGCTACT AGCATTTGTT GCTTACTTAG ATACCTTCAT TATTAGAAAG AGACAGTTAC CGTCAATGGC AGCTACCAGG CCCAACTATT
CAAAGCTT
INFORMATION FOR SEQ ID SEQUENCE CHARACTERISTICS: LENGTH: 1229 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi)
AGAGAAATA.A!
TGCAGGAGA
120
GTCTTTTCTC-
180
CAAAGGAATT
240
TAAGCGAGGA
300 SEQUENCE DESCRIPTION: TTATATTTGT AA4ATTTAAGT AAAACAAGCA TGCTGTCTAC GTGCCGAATT CGGCACGAGA TTGTGGGTCA TTTGCAGGTG GTACAAGGCT GCCATTGACA SEQ ID CTACGTTTAT TAAAAAACTA CAACCCTAAA TGAAGCTTAC AAATCAAATC CCTGCGATAT AGATCTTGGT TCGAGTCTCT CAGCTCTCTC AAGACACCAT GGTGAAGGCT TATCCCACCG AATGCAAGAG GAAGCTCCGA GCTCTCATTG *1.
WO 98/11205 PCT/NZ97/00112
CAGAGAAGAA
360
ATGTCAAGAC
420 .ACG TC T AA 480
TCCCCATAAT
540
CCGGGGGACC
600 AAGC CGCCC T 660
TGGGGTTGAA
720
ACAAGGAGAG
780
CTTACTTCAC
840
AGGCACTGCT
900
ACGCTTTCTT
960
ATGCGTAGAT
1020
TCATCTAATC
1080
CTTGAACCTA
1140
ATTTTGGAAT
1200
TAAAAAAAAA
1229
CTGTGCGCCG
CAAGACCGGA
CAGTGGTCTG
CACC TAT GCT
TGACATTCCG
TCCTGATGCT
TGATAAGGAA
ATCTGGTTTT
AGAGCTT-QTG
TG CT AT CCT
TGCTGACTAT
TCATACCTTC
TTITTCGATTA
CATGTTTTTG
CTGGTTGTGT
AATAAAATAA
ATCATGCT7-TC GGGCC CT T C C GACATCGCAr'G
GACCTTTATC
TTCCATCCTG
ACAAAAGGAC
.:,TTGTGGCCT
GAAGGACCAT
ACTGGAGAGA
AGTTTTGCAG
GCGCGAAG CT C
TGCAGAGACA
TATAGTCACA
AAAAGTTCG
TCTATCA.AGC
GAATCGC~aTG
GGACGATGAG
TTAGGTC.-
AGTTGGCTGG
GAAGAGAAGA
CT CAT CATC T
TGTCTGGTGC
GCACCTCTA
AGGAtAG'"-- .ACCTGAAGC-1 ATTCCT TOCT
TAGAAGTTGG
ATGTTCTTTA
GCATATTTTA
GCACAGCGCT CGGACTTACG ATATGGIGGCC GAGCTTGCCC GGZAGCCAATC AAGGAACAGT TGTGGTGGCT GTTGAAGTGA CAAGCCTGAG CCTCCAGAAG GAGGGATGTT TT'TGGTCACA CCACACCTTG GGGAGATGCC CCCCCTTA'TC TTTGACAACT GCTTCAGTTG CCATCTGATA
GAAGT.ATGCA.CAGGACGAAG
TTCr-TGAACTTIGGGTTTGCTG AGATAGCTTC GTTTTGTATT TGTTATGCGC CATAGTGATA AAATGA ACAT TGAATACAAC ATCGAATGCT TCGTTCCTGT INFORMATION FOR SEQ ID NO:86: SEQUENCE CHARACTERISTICS: LENGTH: 1410 base pairs TYPE: nucleic acid STRANDEDNESS: singie TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: SEQ ID NO:86: GAAGATGGGG CTGTGGGTGG TGCTGGCTTT
GCTTACAATG
120
ATGAATTACT
180
CTGTTGTACA
240
TGTGCTGTGG
300
GAAAAGGACA
360
GAAGCCGTGG
420
GCCAGAGATG
480
GATGGACGGA
540
ATCTCCACTG
600
CTGCTGCGGGG
660
TCGTAAGTTC
ATGGGGACTC
AAAGACACAA
AGTCATGTGA
CTGACAGGAG
AGAGGGAGTG
GCGTTGTATC
AGAGCAGAGC
TTCTGTCTCG
CTCACAGCGT
AAGCAATCCT
TTGCCCT.CAG
GAACACTGCA
TGCATCGCTT
CTTCGGCCTC
CCCCGGGGTC
GTTGGGAGGA
AGATGTCGTG
CTTCAAAGCC
GGGGAGGAi'CT
GGCGCTCAGT
ACTGGGAGTT
GCTGAAGAGA
TTCTCATGGC
CTGTTGGACT
CGCAACTTTA
GTTTCCTGTG
CCATACATTC
GAGAATTACC
ATGGGAATCG
CACTGCGTGA
GCGCACTATT
ACAGTGAGAA
TCATTGCTGA
TTAGAAATAT
CAACAAGGAA
GGTATTTGGA
CAGATATACT
CCCTGAAGAC
TGCCCOATCA
ACACC'CGTGG
AGCTGGTGCA
GCAGTCTCAG
TGGATTGGTG
ACAAGTACGC
TTTCCATGAC
CAGCATATCA
TACCATCAAG
CGTTCTCTCT
GGGAAGAAGA
CAATGAGAGC
GGTTGTTGCA
CAGGCTGTAC
WO 98/11205 CCCG:_ AGT AG 720
CACGCCATCC
780
AAOCTGCACA
840
CAGCAACTGT
900
GAATACTTCT
960
ACCGCGCTC
1020
AGCAAGCCTT
1080
TGGTGGGCAT
1140 GO TOTGAC TA_ 1200 CT TAT TC CCT 1260
ATTCTAGTAT
1320
AAATATGACA
1380
GACAACTACA
1410
ATCCGACACT
C CAAC C CGAA
ACAACTACTA
ATGCAGATTC
TCAAATACTT
GAGGOAO.AAAT
GAGCGATAC
TTCATATAT.A
TG CCC TGC A
TATGTAACCA
AATTT TOTCA
ACTACCTATC
TATATTCTTT
COACCCT CCC
GGCACTGCAG
COT CAACCTC
CACOACCACO
CTCCCCOOCCG
C C T CGGCAC T CAAP T GC CG C AAT TCAOTT AT CACATC CA
GAACCTTTTA
TCAG-1TAAAC
TTCTTT-GCTC
A~aArAAAAAA C ACG CT G.;CC
TATGTCCA
ATGAACAACA
CCC TAT OlGA
CTCACCATCC
TCTCCCTC A
AGTGOTOCCA
TO GCGT T T TTA T GAA CCnC AA.
T T ATAAG CA.A.
TTCCCTCC~rT ATCTG1ATAAT ACAI.TGAGOC A ACOAC 02000 AGGGOCC CT
AGPACATGCC
T_-CTTAGAA
AAAACAAT
GTGATACOT
TTACA'AAP_!TC
CC OAAC CCT C
A.AACACAAT
CATTACT
AACCCCAAAC
PCTINZ97/00112 £AAO;TOC CCS AAT7-AOTCCAC ;A:AAA CCaOG
CAATCCT=T
S A.TGC ACAAG CCT CTCTCTT GA AAC SnCTA -TAP~-~1 INFORMATION -FOR SEQ ID NO:37: SEQUENCE CHARACTERISTICS: LENGTH: 687 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (xi) SEQUENCE DESCRIPTION: SEQ ID NO:87: CTAOTTTCCT TTTACAACAA TC-TCAOOTTT TGAATCTCAC AATAO:TOCG AAAOAGAAC
ATGACGAAGT
120
ATA-ATTTCTCG
180 CTTT COT CA 240 CT T CACCC 300
CATCACTOTT
360
CCCAOTCAOC
420
OACGAP±ATTA
480
CTOCCTTTCO
540
COCCOCACAC
600
CCAACTTTAA
660
GAAATGOTTG
687 ACOT CAT CGCT
TCAATCGATT
CATTTTATAA
COTTGCACCA
TTOTGCAOOC
AACAOGCTCA
AAACCGCTGT
CT CCTCGT CA
ATAGCCTAAA
ATTTOACACA
CTCTTCAGCT
TAOCTCCATT
ACT TGTCCAT
OOACAOTTOC
AOATATCACT
TTOCGATOCC3
GCCAAACTTA
AGAAGCTAGC
CT'_CTCCOC
OTTTCGCCACT
OCTCAT GAAC
OCCACAC
GTOTG '7'
OAAGATCUATC
CCCGACTTCCG
CAGCCOCAC
TCCGT OTTCC
ACACTAAGAG
TOCAOTGOOC
TCAGCAOGCC
CAATCCCTAG
ATTTTTCCCT
"nG:.T CITT
GCT
TCAAkAGCC
AOCCATAOT
CCTTCCTOAO
TGACAGGAAC
CCCOOCCCTT
ITCGTAACTTG
CA-AAATTTCC
TTCTCSCCAA
CCAAAGGATT
TTCTGCCO TGCC ITO GCAT CCC
GCA-AATCGGTA
ACTTCATTTC
TAAAAGAAAC
CCAOCTOAT C
TCCACACAIT
ACTACCACT
TATACCAACT
CAG TITT CC INFORMATION FOR SEQ ID NO:88: SEQUENCE CHARACTE'7RISTICS: WO 98/11205 WO 9811205PCT/NZ97/OO1 12 LENGTH: 683 base pairs TYPE: nuciei;c acid STRANDEDNESS: single TOPOLOGY: ILinear (xi)
GTAGTTTCGT
GATGACGA.AG
120
CATAATTTC:-
180
GCTTTCGTGG
240 ACTTGAGCrC2- 300
CATGACTGT:-
360
CCCC'UAGTGI
420 T CGACGAAPJ7 480 TTrTGGC- 540
TGGCCGCAGA;
600
TCCAACTTTA.
660
CGAAATGGTT
688 SEQUENCE DESCRIPTION: SEQ 1D NO:88: TTTACAACA.A TCTACAGGTT TTCA.;ATCTCA GAATAGTTGC CA;AAGGAAIGC
TPCGTGATCG
GTCAATGGAT
ACAT-T-TATA
GCGTTGGACG
TT GTGCAGGG
GCAACAGGCT
T AAAC CC T G GCTG C TCGCT
GATAGCCTAA
AATTT'GACAC
GCTCTTCAGG
TTAGCTCCAT
TAGTTGTCCA
AGGACAGTTG
AAGATAT CAC 77TSCGM'TGGGj CAG CCAAACT
GTAGAAGCTA
GACTCC-rGTCG
AGTTTGCCAG
AGCTGATGAA
TGGCACAC
T G T rGT TT C
TGAAGATGAT
COCCGACTT'3 TC a GG CC GC A T C C'-7G
TFAACACTAAG
G C T SC -GTG G
CTC:AGGAGGC
T C~ T CCG T A
CATTTTTGGC
TTTGTATTTG
CTGTCAAAGC
GAGOCCATAG
GGTrTGCTGAG TCACAG GAAC AGCCC GGG CC
GGTTGTAACT
CCAABT-AATTTC-
GTTCTCGCCA
TC CAAAGGAT
:T--CTGCGTG
C:GSTGCA TGG
::GCAGCTGA
7 -:TGCaC GA.CA
AGATACC.MAC
7'CAGTTTGGC

Claims (50)

1. An isolated DNA sequence comprising a nucleotide sequence selected from the group consisting of sequences recited in SEQ ID NO: 12 and 57; complements of the sequences recited in SEQ ID NO: 12 and 57; reverse complements of the sequences recited in SEQ ID NO: 12 and 57; and reverse sequences of the sequences recited in SEQ ID NO: 12 and 57.
2. A DNA construct comprising a DNA sequence according to claim 1.
3. A transgenic cell comprising a DNA construct according to claim 2.
4. A DNA construct comprising, in the direction: ooo° a gene promoter sequence, an open reading frame coding for an enzyme encoded by a oleo nucleotide sequence selected from the group consisting of sequences recited in SEQ ID NO: 12 and 57 and sequences having at least about a 99% probability of being the same as a sequence of SEQ ID NO: 12 and 57 as measured by computer algorithm FASTA; and a gene termination sequence. *o. The DNA construct of claim 4 wherein the open reading frame is in a sense orientation.
6. The DNA construct of claim 4 wherein the open reading frame is in an antisense orientation. 7/03/01 73
7. The DNA construct of claim 4, wherein the gene promoter sequence and gene termination sequences are functional in a plant host.
8. The DNA construct of claim 4, wherein the gene promoter sequence provides for transcription in xylem.
9. The DNA construct of claim 4 further comprising a marker for identification of transformed cells. A DNA construct comprising, in the direction: a gene promoter sequence, a non-coding region of a gene coding for an enzyme encoded by a nucleotide sequence selected from the group consisting of sequences recited in SEQ ID NO: 12 and 57 and sequences having at least about a 99% probability of being the same as a sequence of SEQ ID NO: 12 and 57 as measured by computer algorithm FASTA; and i" a gene termination sequence. loll e
11. The DNA construct of claim 10 wherein the non-coding region is in a sense orientation C..
12. The DNA construct of claim 10 wherein the non-coding region is in an antisense orientation. CO C l 13. The DNA construct of claim 10, wherein the gene promoter sequence and gene termination sequences are functional in a plant host.
14. The DNA construct of claim 10, wherein the gene promoter sequence provides for transcription in xylem. A transgenic plant cell comprising a DNA construct, the DNA construct comprising, in the 5' 3' direction: 7/03/01 74 a gene promoter sequence: an open reading frame coding for an enzyme encoded by a nucleotide sequence selected from the group consisting of sequences recited in SEQ ID NO: 12 and 57 and sequences having at least about a 99% probability of being the same as a sequence of SEQ ID NO: 12 and 57 as measured by computer algorithm FASTA; and a gene termination sequence.
16. The transgenic plant cell of claim 15 wherein the open reading frame is in a sense orientation.
17. The transgenic plant cell of claim 15 wherein the open reading frame is in an antisense orientation.
18. The transgenic plant cell of claim 15 wherein the DNA construct further comprises a marker for identification of transformed cells. *ao
19. A plant comprising a transgenic plant cell according to claim 15, or fruit or seeds thereof.
20. The plant of claim 19 wherein the plant is a woody plant. ee
21. The plant of claim 20 wherein the plant is selected from the group :0o. consisting of eucalyptus and pine species. l
22. A transgenic plant cell comprising a DNA construct, the DNA construct comprising, in the 5' 3' direction: a gene promoter sequence; a non-coding region of a gene coding for an enzyme encoded by a nucleotide sequence selected from the group consisting of sequences recited in SEQ ID NO: 12 and 57 and sequences having at least about a 7/03/01 99% probability of being the same as a sequence of SEQ ID NO: 12 and 57 as measured by computer algorithm FASTA; and a gene termination sequence.
23. The transgenic plant cell of claim 22 wherein the non-coding region is in a sense orientation.
24. The transgenic plant cell of claim 22 wherein the non-coding region is in an antisense orientation. A plant comprising a transgenic plant cell according to claim 22, or fruit or seeds thereof.
26. The plant of claim 25 wherein the plant is a woody plant.
27. The plant of claim 26, wherein the plant is selected from the group consisting of eucalyptus and pine species.
28. A method for modulating the lignin content of a plant comprising stably incorporating into the genome of the plant a DNA construct comprising, in the direction: •g a gene promoter sequence; o an open reading frame coding for an enzyme encoded by a nucleotide sequence selected from the group consisting of sequences recited in SEQ ID NO: 12 and 57 and sequences having at least about a 99% probability of being the same as a sequence of SEQ ID NO: 12 and 57 as measured by computer algorithm FASTA; and a gene termination sequence.
29. The method of claim 28 wherein the plant is selected from the group _consisting of eucalyptus and pine species. 7/03/01 76 The method of claim 28 wherein the open reading frame is in a sense orientation.
31. The method of claim 28 wherein the open reading frame is in an antisense orientation.
32. A method for modulating the lignin content of a plant comprising stably incorporating into the genome of the plant a DNA construct comprising, in the direction: a gene promoter sequence; a non-coding region of a gene coding for an enzyme encoded by a nucleotide sequence selected from the group consisting of sequences recited in SEQ ID NO: 12 and 57 and sequences having at least about a 99% probability of being the same as a sequence of SEQ ID NO: 12 and 57 as measured by computer algorithm FASTA; and a a gene termination sequence. a
33. The method of claim 32 wherein the non-coding regioh is in a sense _.orientation. oo••
34. The method of claim 32 wherein the non-coding region is in an i antisense orientation. :35. The method of claim 32 wherein the plant is a woody plant. a.
36. The method of claim 35, wherein the plant is selected from the group consisting of eucalyptus and pine species.
37. A method for producing a plant having altered lignin structure comprising: transforming a plant cell with a DNA construct comprising, in the direction, a gene promoter sequence, an open reading frame 7/03/01 coding for an enzyme encoded by a nucleotide sequence selected from the group consisting of sequences recited in SEQ ID NO: 12 and 57 and sequences having at least about a 99% probability of being the same as a sequence of SEQ ID NO: 12 and 57 as measured by computer algorithm FASTA, and a gene termination sequence to provide a transgenic cell; cultivating the transgenic cell under conditions conducive to regeneration and mature plant growth.
38. The method of claim 37 wherein the open reading frame is in a sense orientation.
39. The method of claim 37 wherein the open reading frame is in an antisense orientation. The method of claim 37 wherein the plant is a woody plant.
41. The method of claim 40 wherein the plant is selected from the group consisting of eucalyptus and pine species.
42. A method for producing a plant having altered lignin structure comprising: transforming a plant cell with a DNA construct comprising, in the direction, a gene promoter sequence, a non-coding region of a 0o gene coding for an enzyme encoded by nucleotide sequence selected from the group consisting of sequences recited SEQ ID NO: 12 and 57 and sequences having at least about a 99% probability of being the same as a sequence of SEQ ID NO: 12 and 57 as measured by computer algorithm FASTA, and a gene termination sequence to provide a transgenic cell; cultivating the transgenic cell under conditions conducive to regeneration and mature plant growth. 7/03/01
43. The method of claim 42 wherein the non-coding region is in a sense orientation.
44. The method of claim 42 wherein the non-coding region is in an antisense orientation. The method of claim 42 wherein the plant is a woody plant.
46. The method of claim 45 wherein the plant is selected from the group consisting of eucalyptus and pine species.
47. A method of modifying the activity of an enzyme in a plant comprising stably incorporating into the genome of the plant a DNA construct including: a gene promoter sequence; an open reading frame coding for an enzyme encoded by a nucleotide sequence selected from the group consisting of sequences *ebb recited in SEQ ID NO: 12 and 57 and sequences having at least about a 0:0 99% probability of being the same as a sequence of SEQ ID NO: 12 and 57 as measured by computer algorithm FASTA; and a gene termination sequence. oo•°
48. The method of claim 47 wherein the open reading frame is in a sense orientation. 0*
49. The method of claim 47 wherein the open reading frame is in an antisense orientation. A method of modifying the activity of an enzyme in a plant comprising stably incorporating into the genome of the plant a DNA construct including: a gene promoter sequence; 7/03/01 09 a 0 09*: @0 0 0*00 8000 s 0 3 0 *0*0 0 0800 0 0 0 06 0 0 S 0 a non-coding region of a gene coding for an enzyme encoded by a nucleotide sequence selected from the group consisting of sequences recited in SEQ ID NO: 12 and 57 and sequences having at least about a 99% probability of being the same as a sequence of SEQ ID NO: 12 and 57 as measured by computer algorithm FASTA; and a gene termination sequence.
51. The method of claim 50 wherein the non-coding region is in a sense orientation.
52. The method of claim 50 wherein the non-coding region is in an antisense orientation.
53. The method of claim 50 wherein the plant is a woody plant.
54. The method of claim 53 wherein the plant is selected from the group consisting of eucalyptus and pine species. An isolated DNA sequence comprising a nucleotide sequence having at least about a 99% probability of being the same as a sequence of SEQ ID NO: 12 and 57 as measured by computer algorithm FASTA.
56. A DNA construct comprising a DNA sequence of claim
57. A transgenic plant comprising a transgenic cell of claim 3.
58. A method for producing a plant having modified lignin structure comprising: transforming a plant cell with a DNA construct of claim 3 to provide a transgenic cell; and cultivating the transgenic cell under conditions conducive to regeneration and mature plant growth. 7/03/01
59. A method for modifying the activity of an enzyme in a plant comprising stably incorporating into the genome of the plant a DNA construct of claim 3. An isolated DNA sequence comprising a nucleotide sequence having at least 90% identity to a sequence of SEQ ID NO: 12 or 57 as measured by computer algorithm FASTA.
61. A DNA construct comprising a DNA sequence according to claim
62. A transgenic cell comprising a DNA construct according to claim 61. Dated this 7th day of March, 2001 Genesis Research Development Corporation Limited :and Fletcher Challenge Forests Limited Patent Attorneys for the Applicant *PETER MAXWELL ASSOCIATES o**o 0* o *oo *oooo *oooo* *ooo *oo OoO o *go• 7/03/01
AU44036/97A 1996-09-11 1997-09-10 Materials and methods for the modification of plant lignin content Ceased AU733388B2 (en)

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US08/713000 1996-09-11
US08/713,000 US5850020A (en) 1996-09-11 1996-09-11 Materials and method for the modification of plant lignin content
PCT/NZ1997/000112 WO1998011205A2 (en) 1996-09-11 1997-09-10 Materials and methods for the modification of plant lignin content

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Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7910326B2 (en) 1996-09-11 2011-03-22 Arborgen, Inc. Materials and methods for the modification of plant lignin content

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AU2004201600B2 (en) * 1998-10-09 2008-04-17 Arborgen, Llc Materials and methods for the modification of plant lignin content
NZ552941A (en) 2004-07-24 2011-02-25 Samuel Roberts Noble Found Inc Modification of the lignin biosynthesis gene hydroxycinnamoyl transferase (HCT)

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* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7910326B2 (en) 1996-09-11 2011-03-22 Arborgen, Inc. Materials and methods for the modification of plant lignin content

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