AU726786B2 - Novel protein having at least differentiation-inducing activity on Friend erythroleukemia cell lines - Google Patents

Novel protein having at least differentiation-inducing activity on Friend erythroleukemia cell lines Download PDF

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AU726786B2
AU726786B2 AU28748/97A AU2874897A AU726786B2 AU 726786 B2 AU726786 B2 AU 726786B2 AU 28748/97 A AU28748/97 A AU 28748/97A AU 2874897 A AU2874897 A AU 2874897A AU 726786 B2 AU726786 B2 AU 726786B2
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Peter Dormer
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Helmholtz Zentrum Muenchen Deutsches Forschungszentrum fuer Gesundheit und Umwelt GmbH
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Description

1 Novel protein having at least differentiation-inducing activity on Friend erythroleukemia cell lines The invention is directed to a novel protein with differentiation-inducing activity which may be isolated from mammalian cells and in particular from culture supernatant of mammalian cell cultures. In particular, the protein may be isolated from murine and human cells.
It is an object of the present invention to provide a novel protein having at least differentiation-inducing activity, particularly on Friend's erythroleukemia cell lines.
According to the invention, this object has been achieved by providing an isolated protein with differentiation-inducing activity on Friend erythroleukemia cell lines comprising the following properties: induces differentiation in Friend erythroleukemia cell lines with hemoglobin formation; a molecular weight in the range of about 10 60 kDa as determined by gel filtration on Sephacryl S300®; a) is encoded by cDNA comprising repeat structures of SEQ ID NOS. 6 and 7; with corresponding mRNA species of different length "comprising identical 3' regions corresponding to the coding region of SEQ ID NO. 2 but different 5' regions; optionally with an expression of the corresponding mRNA in primary cells of the thymus, fetal liver, adult spleen, or bone marrow.
The protein may for example be isolated from irradiated human bone marrow stromal cell lines.
The isolated protein preferably has characteristic repeat structures in the cDNA encoding protein, with corresponding mRNA species of different length consisting of identical 3' regions but different 5' regions.
Preferably, the protein provided by the invention additionally shows at least one of the following features: i) showing a stable in vitro expression of the corresponding mRNA if an allogenic spleen cell reaction is carried out with non-irradiated, not pretreated spleen cells of mouse 2 strains CBA and C57B1/6; ii) inducible by a serum factor present in fetal calf serum; iii) having AT rich regions in the cDNA encoding the protein.
An activity has been discovered in the culture supernatant of a murine myelomonocytic leukemia cell line (WEHI-3) which inducesmurine erythroid cells (Friend erythroleukemia cell lines) to differentiatite under concurrent hemoglobin formation. The molecular weight of this activity is between about 10 and 60 kDa with protein species or protein aggregates of different sizes assumed. Expression of the activity is dependent on a serum factor which so far has not been characterized and which is present in varying concentrations in different batches of commercially available fetal calf serum. An identical activity with respect to its effect has been discovered also in the supernatant of irradiated human bone marrow stromal cells (cell line L88/5).
The activity has been preliminarily designated by EDA (erythroid differentiation activity). In the further course of the investigation also other than erythropoiesis-inducing S. functions have been discovered (see below). In addition,
EDA
has been demonstrated to hae an erythropoiesis-inducing effect on human leukemia cell line K562 (species-crossing effect of 9 EDA).
A small CDNA species of the gene (DY-8) was found by expression on cloning which after transfection into Cos-1 cells resulted in a culture supernatant with EDA activity.
This 715 bp CDNA was used as a probe for the isolation of a larger cDNA fragment of about 1,350 bp (HA-15/2) which after transient expression in Cos-1 cells also exhibited a weak EDA Seffect if the Cos-1 supernatant was used. In the murine cells examined, the gene is expressed in the form of different
RNA
a species (presumably splice variants of about 800, 1,200, 1,350, 1,750, and 2,200 bp. Expression of the eda mRNA, in some cases to a very low extent, was detectable in all tissues examined (Liver, kidney, brain, intestine, placenta). The highest expression was detected in the thymus, followed by etal liver, adult spleen, and bone marrow. Many matopoietic mouse cell lines, especially those with 3 leukemic transformation such as DA-3, WEHI-3, NFS-60, or NFS- 61, but also those without leukemic transformation such as NIH-3T3 or TS1-C3, tend to show very high eda expression at the RNA level.
Using the murine eda probe, HA-15/2,.we were able to detect a corresponding human gene at the DNA level by Southern blot analysis under stringent conditions as well as at the RNA level using Northern blot analysis. The Jurkat cell line was particularly positive in this respect. In addition, a distinct band of about 1,100 bp was found in a case of human chronic T cell leukemia of the T helper cell type which was not detected in any other of the 8 samples of human cell lines and primary human bone marrow material.
In all of the experiments conducted, the 2.2 kbp band of the eda mRNA showed the most consistent expression pattern.
Its structure as analysed in NIH-3T3 cells is depicted in Fig. 19. The repeat structures represent an important characteristic of the eda cDNA (Table The corresponding sequence, a consensus sequence derived from clones of WEHI-3 and NIH-3T3 cell lines, is presented in Fig. 18 which corresponds to SEQ ID NO:1. All mRNA species, i.e. the bands of 800, 1,200, 1,350, 1,750, and 2,200 bp, have an identical 3 end designated by "tail" in Fig. 19 while it is still unclear whether in each case there is a band-specific 5' end or the bands represent different splicing products. Since the differentiation-inducing effect on erythropoietic cells was discovered using clone DY-8 which contains about 640 bp of the 3 region of eda together with 73 bp of its specific end (Fig. 20 includes SEQ ID NO:2) the differentiationinducing function is essentially associated with the 3' end of the cDNA.
A comparison of the band sizes of the various eda mRNA species in different mouse strains such as Balb/c C3H
CBA,
C57B16, Swiss, AKR, or NFS, as well as of partial sequences of the eda cDNA of different mouse strains reveal a mouse strain-dependent variability which is the result of different frequencies of the various repeats in individual mouse /rains. Because of the high eda expression in some murine 4 tumor cell lines a role in tumor cell growth may be expected.
Since the 5' end of the open reading frame has still not been unambiguously defined, also a second protein SEQ ID of 206 amino acids starting further upstream from the 5' end of the 177 amino acid protein SEQ ID NO:3 which was found by expression cloning was permanently expressed in a human colon carcinoma cell line CX2. This larger protein has a differentiation-inducing activity towards murine Friend erythroleukemia cells which is 1 2 dilution grades higher.
Although eda is expressed in many cell lines, the EDA activity is found in the culture supernatants of only a small number of cell lines. It is detectable if the cells are )irradiated or if a major protein depletion takes places, i.e.
under stress conditions.
The study of the role of eda in normal spleen cells of the mouse revealed that a mitogenic or T cell receptorspecific stimulation of the cells or a stimulation of protein kinase C leads to the rapid disapperance of the various mRNA species which is accompanied by degradation products of defined size. In contrast, a stable expression occurs if an allogeneic spleen cell reaction is carried out with nonirradiated and non-pretreated spleen cells of mouse strains CBA and C57B1/6. From these results a significance of the involvement in the allogeneic spleen cell reaction may be concluded which was emphasized by a semi-allogeneic mouse S transplantation model (C57B1/6 spleen cells injected into lethally irradiated CBAxC57Bl/6 mice). In the spleens of the test animals an about 7-fold increase in eda expression occured in the course of an acute "graft-versus-host" disease as compared to the controls which had undergone compatible tissue transplantation.
Already very low concentrations of the recombinant supernatants of the CX2 cell line are able to stimulate the Burkitt's lymphoma cell line in the sense of a growth factor. In addition, also recombinant supernatants of cell line CX2 have a colony-stimulating effect on human hematopoietic progenitors in the fraction of CD34+ bone R, ~row cells.
5 The protein provided by the invention may be isolated from mammalian cells, particularly from the supernatant of mammalian cell cultures. In a preferred embodiment of the invention, it is isolated from murine or human cells.
Preferred cell lines include for example: the murine WEHI-3 myelomonocytic leukemia cell line, ATCC TIB68, and the irradiated L8815 human bone marrow stromal cell line, DSM ACC 2056. In the following, the L8815 cell line will be designated by L88/5. Friend erythroleukemia cell lines F4N or B8/3 were used for detection of the protein.
In the present application, the individual cell lines from which the inventive protein provided may be isolated and on which the effects mentioned may be demonstrated are only presented by way of example. The skilled expert will be able to practise the invention also using cell lines different from those mentioned above. Already for this reason, a deposition of these cell lines becomes unnecessary.
Furthermore, in the references cited in the list of references the cell lines are described in a manner sufficient and thus reproducible. It should again be noted that for the practice of the present invention it is not required to use the cell lines described but that also other cell lines may be used which can be determined by the skilled expert by means of routine experimentation.
For WEHI-3, a computer printout from the ATCC catalogue Shas been included; the same has been done for cell line K562.
Reference is made to the references cited therein in their entirety.
The protein provided according to the invention includes a partial amino acid sequence encoded by a DNA hybridizing to the cDNA of SEQ ID NO:l or NO:2 or NO:4. The hybridization is preferably carried out under stringent conditions. The protein contains at least those amino acids encoded by the nucleotide sequence which has been referred to as "consensus sequence" in Fig. 20. Deletions, insertions, amino acid exchanges, and amino acid modifications are possible inasmuch as they do not interfere with protein function.
RA\j Stringent conditions in the sense of the present 6 invention are those conditions enabling selective and detectable specific binding of the nucleic acid to the gene coding for the protein of the invention or to transcripts of the gene coding for the protein of the invention.
A
hybridization of this type under stringent condition is preferably meant to be a hybridization at 65*C in an aqueous solution or at 42 C in 50% formamide and subsequent washing of the filter at 60 0 C in an aqueous solution having a salt concentration of 15 mM NaCl and a concentration of SDS of 0.1% after which binding of the probe to the gene coding for the protein of the invention or to a RNA derived therefrom can be detected. If shorter nucleic acids are used as probes it may be necessary to employ less drastic hybridization and/or washing conditions.
The present invention is meant to comprise also portions, analogues, and derivatives of the protein of the invention as well as fusion proteins. The protein according to the invention preferably is of essentially purified and native form or of essentially recombinant form and exhibits at least differentiation-inducing activity on Friend erythroleukemia cell lines.
The protein of the invention shows differentationinducing activity. This activity has been demonstrated for murine Friend virus-transformed erythroleukemia cell lines as well as for a human leukemia cell line, i.e. for K562. It may be expected that a similar differentiation-inducing effect on other related cell lines and especially on human leukemia cell lines will be detected in addition. Moreover, it may be expected because of the present results of the investigation that this differentiation-inducing activity is effective not only on erythropoietic cells but also on other cells.
Furthermore, it exhibits a growth factor effect as well as a colony-stimulating effect.
To characterize the protein, the specification as well as the claims always refer exemplarily to the differentiation-inducing activity towards Friend erythroleukemia cell lines. Further activities which have already been detected according to the invention are 7 presented in the present specification. It may be expected that the protein provided herein exhibits also other activities which are inherent to the protein. Thus, the activities mentioned contribute only to a detailed characterization and distinction of the protein and are not intended to represent a conclusive list of its features, properties, and activities.
Thus, it has been found according to the invention that the protein provided has an erythropoiesis-inducing effect on human leukemia cell lines, for example on K 562 (ATCC No.
CRL243).
The present invention comprises DNA fragments according to SEQ ID NO:1 or NO:2 or NO:4, portions, derivatives, and analogues thereof, each encoding a polypeptide having at least differentiation-inducing activity on Friend erythroleukemia cell lines and which hybridize to the cDNA of SEQ ID NO:1 or NO:2 or NO:4, preferably under stringent conditions.
The present invention is also directed to DNA fragments encoding at least part of a polypeptide which has the activity of the human or murine protein with at least differentiation-inducing activity for example on Friend erythroleukemia cell lines according to the present invention.
Furthermore, the present invention is directed to recombinant vectors containing a DNA sequence corresponding to a gene or a DNA fragment coding for a protein with differentiation-inducing activity on Friend erythroleukemia cell lines according to the invention. The vectors of the invention may represent vectors according to the state of the art, for example bacterial plasmids or viral vectors. Also comprised are expression vectors.
Further, the invention comprises host cells transformed by a vector provided by the invention. The host cells may be prokaryotic or eukaryotic cells, for example E.coli cells or yeast cells.
AL The DNA fragments according to SEQ ID NO:1 or NO:2 or 0:4 of the invention, portions, derivatives, or analogues 8 thereof each coding for a polypeptide having at least differentiation-inducing activity on Friend erythroleukemia cell lines may be prepared according to the invention for example by screening a human or murine cDNA clone library using a DNA fragment of a DNA coding for a murine or human protein with differentiation-inducing activity.
The present invention further relates to monoclonal or polyclonal antibodies directed against at least one epitope of a protein having at least differentiation-inducing activity on Friend erythroleukemia cell lines.
In addition, according to the invention there is provided a therapeutic, diagnostic, or experimentally useful means containing as an active ingredient at least one nucleic acid in an effective amount which hybridizes to a gene or a portion thereof, and encoding the protein of the invention which has at least differentiation-inducing activity on Friend erythroleukemia cell lines.
Also, there is provided according to the invention a therapeutic, diagnostic, or experimentally useful means characterized in that said means contains as an active ingredient at least one nucleic acid comprising the nucleotide sequence encoding a protein with at least differentiation-inducing activity on Friend erythroleukemia cell lines, a portion thereof, a nucleotide sequence 3 hybridizing to a nucleic acid as under and/or under stringent conditions, or a nucleotide sequence complementary to a nucleotide sequence as under and/or The nucleic acid of said means optionally may be a modified DNA or RNA.
The therapeutic means provided according to the invention includes the protein having at least differentiation-inducing activity for example on Friend erythroleukemia cell lines of the present invention, an analogue, derivative, or portions thereof, each together with conventional carriers and/or adjuvants in an effective amount.
The therapeutic, diagnostic, or experimentally useful ans according to the invention may for example be used as a 9 molecular probe in diagnostics or as an antisense nucleic acid for the inhibition of gene expression. By use of antibodies against this means, the differentiation-inducing effect may be therapeutically, diagnostically, or experimentally modulated.
Furthermore, the invention relates to a method for the transformation of a prokaryotic or eukaryotic cell using a DNA which encodes the protein provided according to the invention having at least differentiation-inducing activity on Friend erythroleukemia cell lines-as well as portions, derivatives, or analogues of this DNA having said activity.
Moreover, the invention is directed to a fusion protein having an amino acid sequence consisting completely or in part of the amino acid sequence of the human or murine protein having at least differentiation-inducing activity on Friend erythroleukemia cell lines according to the invention and in part of a prokaryotic or eukaryotic protein.
Further, the invention is directed to a synthetic protein having at least differentiation-inducing activity on Friend erythroleukemia cell lines according to the invention which has an amino acid sequence encoded by a DNA sequence hybridizing to the DNA sequence according to SEQ ID NO:1 or NO:2 at least under stringent conditions.
The protein provided according to the invention is preferably useful for the treatment of diseases accompanied by impairments of the differentiation-inducing activity in erythropoietic cells.
Fields of the invention Further, it is preferably suitable for the treatment of diseases wherein the formation of blood cells in bone marrow and/or lymphopoietic tissue is impaired owing to illness or treatment.
Furthermore, it is preferably suitable for the treatment of cells of blood-forming tissues within or outside the organism for the purpose of achieving a proliferation of precursor cells and/or stem cells of blood formation with or wihout a genetic alteration.
10 Moreover, it is preferably suitable for the modulation of immunological processes wherein cellular recognition or cellular elimination processes are supposed to take place in the sense of a mixed spleen cell reaction.
In the following, the invention will be explained in more detail with respect to the accompanying Figures and regarding preferred embodiments. However, the invention is not restricted to the preferred embodiments described.
The Figures show Fig. 1 Induction of erythroid differentiation in murine F4N erythroleukemia cells by 4 different WEHI-3-conditioned media Fig. 2 Induction of erythroid differentiation in murine
B
8/3 erythroleukemia cells by culture supernatants of the human stromal cell line L88/5 measured on days 3 and 4 Fig. 3 Induction of erythroid differentiation in human K562 CML cells by 4 different WEHI-3-conditioned media. In particular, an effect is recognizable with WCM (C) Fig. 4 Effect of WEHI-3-conditioned medium on the cell number and the a-globin synthesis of B 8/3 mouse erythroleukemia cells Fig. 5 Effect of WEHI-3-conditioned medium on the adherence of WEHI-3 cells to the plastic bottoms of culture flasks, the culture period being 72 hours. The relative cell number was measured by the MTT test.
Fig. 6 Gel chromatographic fractionation of WEHI-3conditioned medium using Sephacryl S 300®. Biological testing of the fractions for EDA activity was performed using B 8/3 mouse erythroleukemia cells, the culture period being 4 days.
The induction of a-globin mRNA was measured using Northern lot analysis 11 Fig. 7 Dependence of EDA production on the density of WEHI-3 cells on harvesting the cells from the FCS-containing primary culture. Activity was determined by culturing B 8/3 mouse erythroleukemia cells with WEHI-3 supernatants for 3 days and counting the percentage of benzidine-positive cells Fig. 8 Fractionation of the supernatant of experiment W3/2 (see Fig. 7) and testing the fractions in culture with B 8/3 mouse erythroleukemia cells and counting the percentage of benzidine-positive cells Fig. 9 Steps of expression cloning of a murine eda Ssequence by stepwise reduction of the number of clones of an expression library which were included in the biological testing Fig. 10 Induction of murine B 8/3 erythroleukemia cell differentiation by Cos-1-conditioned supernatants in 3 independent experiments following transfection with clone DY- 8 or an irrelevant control clone BY-7, respectively. For comparison, WEHI-3 cell supernatant was included in the testing as a positive standard. Mean values 1 standard deviation of individual results from the BY-7 control clone are represented as hatched area. Additionally, for comparison purposes 1 standard deviation of the results obtained with DY-8 is shown as bars.
Fig. 11 Expression of the truncated eda clones HA-15/2 and HA-12/1 in Cos-1 cells and testing of the Cos-1 supernatants in B 8/3 mouse erythroleukemia cells in culture samples over a period of 3 and 4 days. The percentage of benzidine-positive cells was evaluated. On day 4, the difference between the control and the result obtained with clone HA-15/2 is hardly above the 5% significance limit Fig. 12 Southern blot analysis of different murine DNAs cut with EcoRI using the murine HA-15/2 eda probe. Also alysed was the DNA of the human K562 cell line (4th lane 12 from the left) showing a weak positive signal of bands of and 6.5 kbp upon highly stringent washing Fig. 13 Expression of eda in the RNA of murine NIH-3T3 (always on the left) and M2-10B4 (always on the right) cell lines. Northern blot hybridization was carried out with different probes as detailed in the text Fig. 14 Northern blot analysis of the RNA of various human cell lines using the murine HA-.15/2-derived eda probe.
For each of the cell lines H33, Reh, and K562 15 ug of total RNA was used; for the Jurkat sample about 5 pg of poly(A)+ RNA was used Fig. 15 Expression of eda in murine spleen cells (strain C3H) after stimulation with anti-T cell receptor antibody or concanavalin A. The densitometry results of the Northern blot analysis after hybridization with the murine HA-15/2-derived eda probe are presented in separate for the large eda bands of 2,200 and 7,000 bp and for the smaller bands of 600 and 400 bp presumably representing degradation products Fig. 16: Expression of eda in murine spleen cells of mouse strains CBA and CBL upon performing a 3-day mixed spleen cell culture. Expression of eda in murine placenta and murine fetal liver (d 15) are shown as controls. Northern blot analysis with 5 15 #g of total RNA using eda clone HA-15/2 as a probe. The amount of RNA loaded to the individual lanes may be seen from the subsequent hybridization of the RNA samples of the same filter to a 28 S RNA probe Fig. 17 Expression of the 2.2 kbp eda mRNA species in a semi-allogenic transplantation (CBL cells in (CBA x CBL) F 1 hybrids) or an autologous transplantation, respectively, of CBA x CBL spleen cells into (CBA x CBL) F, hybrids.
Transplantation was carried out with 5 x 10 7 spleen cells per OjLI animal. Expression of eda in CBL cells on day 0 was taken as CO0 0 Ee 13 100%. Northern blot analysis with 15 ug of total RNA per each lane using the murine HA-15/2-derived eda probe Fig. 18 Consensus partial sequence of the 2,200 bp eda cDNA. This sequence lacks a continuous open reading frame, with possibly individual fragments missing from the sequence Fig. 19 Preliminary structure of the 2.2 kbp eda cDNA.
Abbreviations R 1-1 to R 1-3 81 bp repeats No. 1-3; R 2-1 and R 2-2 approx. 180 bp repeats Nos. and 2; Tail 3' end of the gene which is identical for all mRNA species; Unknown approx. 300 bp of up to now unknown sequence; Start? 81 bp fragment from the 5' region the exact localization of which within the sequence at the beginning of the 2.2 kbp eda cDNA still has to be determined. The open reading frame found by expression cloning resides in the black part of the region designated by "Tail" wherein a 385 bp repeat (R 3-1) was present in only 2 of 32 clones which is presumably spliced out prior to translation to remove the stop codon and the "frameshift" Fig. 20 Sequence of clone DY-8 consisting of 715 bp.
The first 73 bp (in italics) determine the specific 5' end of this clone, starting with position 74, the clone largely corresponds to the 3' region of the presumptive 2.2 kbp eda S species as indicated by the term "consensus sequence". The sequence coding for 177 amino acids starts with the boxed ATG at position 155 and is printed in bold letters. An almost identical sequence of 636 bp is presented in the lower row into which an ATG was artificially inserted at position 52 leading to an open reading frame for 206 amino acids Fig. 21 Differentiation-inducing effect of various S conditioned media on murine erythroleukemia cell line B 8/3.
The values obtained from the control media 1 standard deviation) are represented by a grey bar. The CX-2 control supernatant after transformation with vector alone is /2LA eferred to as "CX-2 Rc/CMV". Standard WCM (WEHI-3 CM) was 14 used as a positive control Fig. 22 Effect of different concentrations of the supernatant of cloned CX2 cell line transfected by the 534 bp eda in vector Rc/CMV (CX2-C9) on the growth of cells of the Burkitt's lymphoma cell line. OD measurements were performed in microwells using the MTT test after 4 days of culture. A Dependence of growth on seeding cell concentration, in the presence or absence of different concentrations of CX2 supernatant. B Relationsship between the growth of BL-70 cells and the concentration of recombinant CX2 supernatant added for 3 different cell Sdensities in the same experiment Fig. 23 Methyl cellulose cultures of human CD34+ bone marrow progenitors with and without addition of eda in two different constructs. A Number of mixed colonies of a normal donor after 20 days of culture with and without addition of 10% of the supernatant of bladder carcinoma cell line 5637. Two different supernatant concentrations (5 and 17%) of transfected but not cloned CX2 cells were used. p 0.05; p 0.01. B Supernatant from a CX2 cell line was used which was cloned and transfected with 534 bp eda in Rc/CMV vector (CX2-C9). Colony counts after 14 days of BFU-E and GM-CFC are shown from a normal bone marrow donor (upper part) and a CML patient (lower part).
15 The accompanying Tables show Table 1 Percentage of reduction in EDA activity Table 2 Cytokins without differentiation-inducing activity on murine erythroleukemia cells Table 3 Repeat structures in the presumptive consensus partial sequence of the 2,200 bp eda DNA.
Materials and Methods Cell lines Experiments were performed using the following cell Slines: murine myelomonocytic leukemia cell line WEHI-3 (Warner et al., 1979; ATCC No. TIB 68), murine embryonic fibroblast line NIH-3T3 (ATCC No. CRL 1658), human chronic myelogenous leukemia-derived line K562 (Lozzio and Lozzio, 1975, ATCC No. CRL 243), human ALL cell line Reh (Rosenfeld et al., 1975; ATCC No. CRL 8286), Jurkat cell line-derived line H33HJ-JAl (ATCC No. CRL 8163), and monkey kidney cell lines Cos-1 (ATCC CRL 1650) and Cos-7 (ATCC CRL 1651) were obtained from ATCC. The murine cell lines NFS-60 and NFS-61 (Holmes et al., 1985), DA-3 (Ihle et al., 1984), and FDCP-1 (Dexter et al., 1980) were obtained from J. Ihle, Dept. of Biochemistry, St.Jude's Hospital, Memphis, Ten., U.S.A.
Murine myeloid line 32DC123 (Greenberger et al., 1983) as S well as murine T helper cell line TS1-C3 (Uyttenhove et al., 1988) and murine EL-4 thymoma line (Farrar et al., 1983) were a gift of L. HUltner, GSF Institut fir Experimentelle Hamatologie, from whom also the L138.8A mast cell line was obtained (HUltner et al., 1989). The murine Friend erythroleukemia cell lines F4N (Ostertag et al., 1972; Dube et al., 1975) and B8/3 (Ostertag et al., 1973; Ostertag et al., 1974), were kindly given to us.by W.Ostertag, Abteilung fr Virologie, Heinrich Pette-Institut, Hamburg. The human T lymphoma cell line Jurkat was a gift of S.Thierfelder,
GSF-
Inst. f. Immunologie, Munich, and the murine bone marrow stromal cell line M2-10B4 (Lemoine et al., 1988) was obtained -UA4' from C.Eaves, Terry Fox Institute, Vanvouver, Canada. The 16 human bone marrow stromal cell line L88/5 was established by our institute from bone marrow of a normal donor by transfection with a replication-deficient SV-40 virus construct (Thalmeier et al., 1994). The CX-2 cell line is a moderately differentiated human colon carcinoma cell line established in 1979 as a xenograft in nude mice (Ovejera et al., 1979). It was a kind gift of G.Multhoff, GSF-Institut f.
Klinische Hamatologie. The Burkitt's lymphoma cell line was established by Lenoir et al. (1985) and given to us by G.W. Bornkamm, GSF-Inst. f. Klinische Molekularbiologie.
Mice All mice were obtained from the GSF in-house pathogenfree breeding facility. The following strains were used: C3H, Balb/c, CB1 (C57B1/6), CBA, and AKR.
Cell culture media Media were purchased from Life Technologies, D-76339 Eggenstein. If not otherwise specified in the following, all cell lines were cultured in RPMI-1640 supplemented with 2 mM L-glutamine, and 100 U/ml of penicillin and 100 ug/ml sptreptomycine (Life Technologies), respectively. This medium further contained 10% of fetal calf serum (FCS) obtained from different manufacturers and specifically tested with regard to particularly desired properties promotion of differentiation-induction or optimal proliferation). To obtain WEHI-3-conditioned medium, a low serum medium was prepared from RPMI-1640 medium in analogy to the description by Guilbert and Iscove (1976). This medium contained 0.1% bovine serum albumine, 2 mM of L-glutamine, 20 U penicillin/ml, 20 yg/ml streptomycin, 32 mg/ml iron-saturated human transferrin, 10- 5 M 1- a-dipalmitoyl lecithin, 2 x M oleic acid, and 2 x 10-5 M cholesterol. For the cultivation of Cos cells Dulbecco's medium containing 4.5 g/l D-glucose, FCS, 2 mM L-glutamine, and 100 U/ml penicillin as well as 100 yg/ml of streptomycin was used.
For the cultivation of human bone marrow progenitors the BFU-E test was carried out in methyl cellulose cultures.
1AIv
D
17 Methyl cellulose (Stem Cell Technologies Inc., Vancouver, Canada) was used in a concentration of 0.9% in Iscove's modified Dulbecco's medium (Life Technologies, D-76339 Eggenstein) containing 30% of selected fetal calf serum, 1% bovine albumin, 10-' M 2-mercaptoethanol, 2 mM L-glutamine, 1% of penicillin-streptomycin, 3 U/ml erythropoietin, 100 ng/ml rmu kit ligand, and either 10% of supernatant of human 5637 bladder carcinoma cell line (Takaue et al., 1987) or of a "cytokine cocktail". The "cytokine cocktail" was composed of 20 ng/ml rh GM-CSF, 20 ng/ml rh G-CSF, 20 ng/ml rh IL-3, and 20 ng/ml rh IL-6.
SBacterial strains Strains DH5 (Life Technologies, D-76339 Eggenstein) and Sure® (Stratagene, D-69044 Heidelberg) were used.
Bacterial media Bacteria were routinely cultured in LB medium (Sambrook et al., 1989). For transformation (Hanahan, 1983) also SOC medium was used as described by Sambrook et al. (1989).
Vectors As a prokaryotic-eukaryotic shuttle vector and as an expression plasmid for the preparation of a cDNA library, a 3,753 bp vector primer was used as principally described by Okayama and Berg (1982) which was obtained from USB company, Cleveland, Ohio, U.S.A. This plasmid, pXPRS+, (Pruitt, 1988) contains an SV-40 origin. Gene expression is controlled in eukaryotic cells by the SV-40 early promoter. In addition, a polyadenylation site is contained. For stable transfections the 5,446 bp Rc/CMV vector (Invitrogen, Holland) was used in which transcription of the inserts is controlled via a CMV promoter and selection is carried out by a neomycin resistance gene.
Moreover, a cDNA library was established in lambda phages using vector Lambda Zap II® (Stratagene company, La Jolla, CA., Using an appropriate bacterial strain, e.g. Sure®, this lambda phage enables blue-white selection, 18 and it contains a plasmid (pBluescript@ SK-) which may be cut out of the X phage together with the insert using helper phage R408.
Methods For removal of cells or organs from mice, the animals were sacrificed in ether narcosis. To obtain RNA, organs were immediately transferred to liquid nitrogen and after removal from the liquid nitrogen were further treated by crushing in the frozen state in a cooled mortar in the presence of added guanidinium rhodanide buffer. Bone marrow cells were flushed out from femoral and tibial diaphyses with a 12 gange needle using RPMI medium 10% FCS and passed through a sieve.
Spleen cells were obtained by crude cutting of the organs with scissors and passing through a sieve using a piston and addition of RPMI medium 10% FCS.
Total cellular RNA was obtained by the acid phenol method according to Chomczynski and Sacchi (1987). From this material, mRNA was isolated if required by hybridization to oligo(dT) bound via streptavidin-biotin to magnetic particles (PolyATract,t Promega-Serva company, D-69042 Heidelberg).
Isolation of genomic DNA was performed using CsCl density gradient centrifugation with subsequent proteinase K and phenol treatment.
Highly competent bacteria x 109 colonies/ug
DNA)
were obtained following the protocol of Inoue et al. (1990) by cultivation of bacteria at 18 0 C up to an OD of 0.6.
Bacteria were transferred to buffer containing MnCl 2 and CaC1D and stored with 7% DMSO in liquid nitrogen. Synthesis of cDNA by means of the pXPRS+ vector primer was carried out using the Clonstruct® kit of USB company, Cleveland, Ohio, U.S.A. according to manufacturer-s instructions. To perform this, the poly(A) stretches of mRNA of WEHI-3 cells were bound to a poly(T) stretch in the opened vector-primer, and synthesis of the first and second strand was carried out on the vector-primer. Using terminal transferase, a poly(C) stretch was synthesized to the 5' end of the insert, and a omplementary poly(G) strand was generated for ligation by D 14E 19 restriction of the 3' end with BstXI. Highly competent bacteria were obtained according to the description of Inoue et al. (1990) and transformed by these ligated vectors obtaining a total of 5 x 10 s transformants. These were amplified in 1 x 500 ml of LB medium followed by isolation of plasmid DNA using CsCl density gradient centrifugation. An aliquot of the DNA bank obtained in this way was sizeseparated on an 1% agarose gel without previous restriction cutting. Using a supercoiled reference DNA (Life Technologies, D-76339 Eggenstein) plasmids showing insert sizes of 600 to 2,500 bp were cut from the gel and purified.
The DNA obtained in this way was used for another Stransfection of highly competent DH5 bacteria in the course of the expression cloning.
To prepare the phage library from NIH-3T3 mRNA, the Time Saver® cDNA synthesis kit of Pharmacia Biotech company,
D-
79111 Freiburg was used according to manufacturer-s instructions. To both ends of the cDNA NotI-EcoRI adaptors were ligated. The EcoRI restriction sites were ligated to those of EcoRI cut Lambda ZapII® phage of Stratagene company, La Jolla, CA., U.S.A. Subsequently, the phages were packaged using the Gigapack II® packaging kit of Stratagene company and were used to infect Sure® bacteria according to manufacturer's instructions. After selection of positive Sclones using a radiolabeled probe the inserts were excised from the lambda phage together with pBluescript® SK- using helper phage R408.
DNA gel electrophoresis was performed routinely on 0.8 to 1.5% agarose gels. DNA fragments were separated in low melting point agarose Sea Plaque GTG® (FMC Bio Products, Rockland, MD., and then cut from the gel. Afterwards, the agarose was liquefied using GELase® (Biozym Diagnostik GmbH, D-31833 Hess. Oldendorf) according to manufacturer's instructions. Purification was carried out using Microcon 100® concentrators (Amicon GmbH, D-58453 Witten). Analytical fractionation of RNA was done using 2.2 M formalin-1.2% agarose gels. For hybridization, DNA and RNA gels were A otted onto Hybond-NO nylon filter membranes (Amersham- 20 Buchler, D-38110 Braunschweig) using a VacuBlot® device (Pharmacia Biotech, D-79111 Freiburg). Autoradiograpic detection of distinct DNA or RNA bands on the nylon membranes was carried out by labeling the respective probes with 3 anes dCTP using the Random Primed DNA Labeling kit of Boehringer Mannheim company. After washing of the hybridized filter membranes under the stringencies required according to the instructions of Sambrook et al., 1989, X-ray films were exposed to these filters. For quantification, Fuji imaging plates (Fuji Photo Film Co., Ltd. Japan) were exposed with the filters and digitalized by a Fuji phospho-imager and computer-evaluated. Sequencing of DNA fragments was done by the chain termination method according to Sanger et al.
(1977) using di-deoxynucleotides.
Transfection of Cos-1 and Cos-7 cells was done by the DEAE dextran method (Cullen, 1987). After 30 min of incubation of the cells with 500 ng of DNA/3.5 cm 2 culture disk and 5% DEAE dextran, and after incubation for 2.5 hr with 80 pM chloroquine an incubation was performed for 3 minutes with 15% buffered glycerol instead of performing the DMSO shock mentioned in the protocol. By this, a substantially decreased background of differentiation induction was achieved by the Cos cell supernatants. The conditioned Cos supernatants were harvested after 72 hours, and were added in serial dilutions with initially 50% of murine erythroleukemia cell supernatants of lines F4N or B8/3 in 9 6-well microplates. Induction of differentiation in these samples was determined by counting the percentage of benzidine-positive cells after 3 and/or 4 days. For this purpose, a stock solution of 10 mg of N,N,NN F o t tetramethylbenzidine (Sigma Biochemicals D-82039 Deisenhofen) in 10 ml 12% acetic acid (NTMB solution) was prepared. Immediately before staining was carried out, a dilution of 35 0% NTMB solution and 35 pl of isopropanol and yl of 30%
H
2 0 2 was prepared. Depending on the cell density, 10 pl of the cells were pipetted into a new microwell and filled up to 100 pl with fresh RPMI 1640 medium containing FCS. 5 ml of the diluted NTMB solution were added.
IN 21 Following an interval between 10 and 30 minutes, the Percentage of benzidine-positive cells was counted in the microwells by their green color using a reverse microscope Stable transfection of CX-2 cells was done using the LipofectAMINE@ transfection i of was done u s ing t h e LipofectAMINED transfection kit of Life Technologies company, D-76339 Eggenstein, according to manufacturers instructions.
4 u1 of LipofectAMINE® were used per well of a 6 well plate 10 cm 2 Nunc GmbH company, 65203 Wiesbaden).
To prepare WEHI-3-conditioned media the cells were inoculated three days prior to the preparation in a density of 2.5 x 10'/ml in RPMI 1640 medium containing 10* FCS and the other usual additions. After 3 days the cells had grown to densities between 3.5 x 105 and 1.2 x 10 6 /ml. They were centrifuged and washed 1 x in RPMI 1640 medium without any additions and then adjusted to 1 x 106 /ml in low serum medium. After 3 days, the conditioned medium was harvested and following a vigorous centrifugation was concentrated using an Amicon 10 concentrator These
WE--
conditioned media (WCMs) were aliquoted and frozen at -20-3- In this form, the supernatants could be stored over 3 years with a 2 to 8fold loss of activity occuring gradually.
For fractionation, the WCM concentrated by 20 to was separated into single fractions by gel filtration on Sephacryl S300® using a gel bed of 90 x 2.6 m with PBS as running buffer and a flow rate of 10 ml/min with detection being performed at 280 nm. BSA (68 kDa), chymotrypsinogen kDa), and cytochrome c (12.5 kDa) served as olecular weight standards.
The relative cell number per microwell in 96 well microplates was determined using the MTT test (Mosann 1983). This test detects the ability of cells to convert the yellow-colored tetrazolium salt of 5-dmethylthiz o o n e r e into the purple
MTT
formazan. This ability is dependent on dehydrog h e l e in active mitochondria whereby eventually the cell number i evaluated relative to the number of active mitochondria k Color intensity was determined with an ELSA reader (SLT, Salzburg) using a test wave length of 550 n and a reference S L T L n m a nd a reference 22 wave length of 690 nm.
Adherence of WEHI-3 cells was tested after incubation with WCM by their adherence to the plastic bottoms of 96 well microplates (Nunc GmbH, 65203 Wiesbaden) To perform this, the supernatant was removed from the respective microwells and the bottom of the microwells was rinsed 1 X with fresh medium (RPMI 1640 without additions). After aspiration of the medium containing the detached cells in the aspernat ion o f t h e RPMI 1640 medium containing 10% FCS and 2 mM L-glutamine was added and the MTT test performed. Cells which were detached and already floating in the supernatant were ipetted int a c h e d new microwells and measured by the MTT test in a similar fashion.
For the isolation of CD34+ cells from human bone marrow Percoll-separated mononuclear bone marrow cells were incubated with paramagnetic plastic beads (Dynabeads) coated by monoclonal antibody BI-3C5 directed against CD 34 b (Deutsche Dynal GmbH, Hamburg). The CD34+ cells attached to Dynabeads che were separated by a permanent magnet, and afterwards the Dynabeads® were removed from the CD34+ cells by treatment with a specific antibody preparation obtained from the same company (DETACHaBEADS®). The whole procedure was carried out according to the instructions of Dynal company.
Colony numbers in the cultures of human CD34+ bone Smarrow cells were evaluated after 14 21 days sing a inverted microscope. In the evaluation, all hemoglobinized colonies and those with similar morphology but lacking the hemoglobin staining were counted as BFU-E, all colonies which did not contain BFU-E were summarized as GM-CFC, and those colonies which were formed from at least 2 different cell types were counted separately as mixed colonies.
Results EDA activity in different cell lines Fig. 1 shows the effects of 4 different WEHI-3conditioned media on the number of benzidine-positive F4N cells and, thus, on the differentiation and hemoglobinization o f these cells. The number of benzidine-positive cells upon
AT
U^
0Q^ 23 incubation with 1.2% DMSO is shown as a ositive ontrol.
With DMSO, up to 70% of F4N cells become positive on day 4.
However, despite a similar amount of differentiation induction by WCM in this experiment, its kinetics differ from that of DMSO: Differentiation is induced in these cells by WCM not before day 3 which is clearly different from the negative controls. This activity in WCM as measured on murine Friend erythroleukemia cells was designated by "EDA" for Erythroid Differentiation Activity as a wrking designat f o The amount of differentiation induction uwing the same WCM on was subject to greater variations in individual experiments which may be attributed to the differentation tendency of the erythroleukemia cells. Factors of the medium, the FCS, as well as the initial cell density of the erythroleu cells played a role. Therefore a reference was included incells such examinations as a positive control. EDA was not only detected in the WEHI-3 c wa s n o t only detected in the WEH-3 cell supernatant but also in the supernatants of NIH-3T3 cells upon cultivation in 1% FCS, and also in supernatants of the human bone marrow troal cell line L88/5, although in the latter case only af s t r o ma l e er irradiation as well as a prolonged culture period (Fig. 2).
Effect of EDA on murine and human cells The factor having an effect on murine cells may be of murine or human origin. The murine factor in WCM also shows a weak effect on human K562 cells which are not induced to erythropoietic differentiation by DMSO (Fig. 3, especially WCM Therefore, the activity referred to as EDA is species-crossing in both directions.
Bioloical P roperties of the activit studied The effect of EDA on murine erythroleukemia cells is not Primarily directed to the inhibitiop of proliferation.
Although in many experiments a proliferation inhibiting effect upon higher factor concentrations was of considerable importance, experiments as e.g. presented in Fig. 4 show that while an induction of differentiation clearly Occured as may f M be seen from the increase in a-globin RA expression no u T
PAT
24 effect on the proliferation could be observed This differentiation induction was accompanied by a downmodulation in the amount of c-myb transcript which was also observed if incubations of other cell types such as 32DC123 with WCM were performed, and which, moreover, was accompanied by a concentration-dependent prolongation of the half life of c-myb mRNA. Since a down-modulation of c-myb may be observed in many hematopoietic cellular systems in the course of differentiation, it may be assumed that the induction of erythropoietic differentiation by EDA nly represents the effect on one of several cellular s on y repre s e n t s t h e effect on one of several cellular systems. In this respect, the increase in WEHI-3 cell adherence by their own conditioned medium (Fig. 5) which has been detected by us may Possibly be considered as an auto-inductive effect in the sense of an induction of differentiation. In this context, the increase in adherence of these myelomonocy cells is equivalent to a differentiation step towards the devel i opment of macrophages. According to these findings and assuming that the effects have also been brought about by EDA there is the possibility that EDA may be a factor which generally induces differentiation at least in hematopoietic cells.
Physical and chemical roerties of EDA Some of the physical and chemical properties are I) summarized in Table 1.
Exclusion of individual ctokines as effectors of the
EDA
effect Theoretically, a number of cytokines may be the effectors of the activities observed in the differentiation assay with murine erythroleukemia cells. Several cytokines could be ruled out as effectors. (Table 2).
25 Fractionation of WEHI-3-conditioned meia WEHI-3-conditioned media were fractionated by means of Sephacryl S300@ gel filtration. After addition of 0.05% BSA, the individual fractions were incubated in a volume of with 88/3 cells in 5 m1 cultures for 4 a v o l u m e o f 2 0 with B8/3 cells in 5 ml cultures for 4 days. Afterwards, the relative amount of a-globin mRNA formed was quantifi e rw The main peak in Fig. 6 ran in the low molecular weight slope of
BSA.
Screening for otimal EDA exression-conditions to be sed in expression cloning WEHI-3 cells were grown to different densities in 250 ml flasks with FCS-containing medium. After reaching the various densities (Fig. a major portion was harvested for mRNA preparation and a minor portion was again cultivated under standard conditions in low serum medium for 3 days to obtain WCM. As shown in Fig. 7 the desired densities of approx. x 10' 5 x 10 s and 8 x 0 cells/ml (W3/3) were reached after different times. The cells were adjusted to a uniform density of 1 x 10 6 /ml and were further cultivated for 72 h in low serum medium e adhet E^ther c u l t i v a t e d f o r 72 h in low serum medium. The highest EDA activity was found in the W3/2 supernatants (Fig. Therefore, the RNA obtained from the harvested W3/2 cells was further treated to construct an expression library. t becomes clear from Fig. 7 that always an inhibition of the differentiation induction is found if higher WCM concentrations are used.At the same time, an inhibition of the proliferation is observed for the same concentration. Fig. 8 shows that for the W3/2 WCM the ptimal concentration for an induction of differentiation in B 8/3 cells by fractions between 66 and 25 kDa is at 25%. Although in this analysis in accordance to the results of Fig. 6 the main EDA peak was found at a molecular weight between 60 and kDa other similar studies showed'significant activities down to molecular weights of 10 kDa. Possible explanations are the presence of different molecules which show EDA activity or the association of one EDA molecule species in aggregates of different sizes or the formation of degradation products.
26 It was observed during the analysis ofptimal ulture conditions for WEHI-3 cells to obtain high DA acti mal c u l t u r e that the type of primary incubation in 10% FCS is of importance. Tests of 6 different batches of FCS obtained from various manufacturers gave very different ields of EDA activity. The most promotive FCS was used for further experiments. Another important finding was that it was impossible to obtain EDA activity if in the second cultivation step (typically 72 h in low serum medium containing 0.1% BSA) the same medium containing 10 FCS was used as in the first step (data not shown F a s Construction of an exression libra-y Usina W2 RNA and The library prior to amplification comprised 5 x 10 s lones. After amplification and size selection (inserts of >600 bp) approx. 500 clones per each Circular Hybond-N filter with a diameter of 14 cm were plated onto LB agar. For isolation of plasmid DNA, clones were grown by transfer on a second filter. After transfection of this DNA into Cos-l cells, the Cos-1 supernatant was tested in a sample with 8/3 cells. The selection criterion was the percentage of benzidine-positive cells after 3 5 days. A total of 25,000 clones were screened in this way. The D series showed a positive signal (Fig. The 520 series D clones were divided into groups each with approx. 25 clones and were retested (D15 series). Then, a step with approx 0 clones in ere each group (DX series) wasncarrd happrox. 10 clones in each group (DX series) was carried out followed by testing each of the remaining 10 clones individually (DY series) The activity obtained with clone DY-8 was 1-2 dilution steps lower than that of the positive WCM control. Th DNA of this clone was purified and transfected transiently into Cosf cells in 3 independent experimens.AahsentlY i n t o C o s 1 cells in 3 independent experiments. A highly Significant difference was obtained between the differentiain in by supernatants of cells transfected with DY-8 and the differentiation induction achieved by control spernatants after transfection with the same vector containing an relevant insert of the same size (Fig. i0).
27 Radioactive screening of the S+ library with clone DY-8 Instead of a distinct band, a smear over approx. 200 bp appeared for clone DY-8 which, thus, included a ize range of about 950-750 bp. Because it was Supposed that a truncated clone had been obtained, the gene library was screened sing radiolabeled DY-8 as a probe. A total of 32 clones was obtained the largest being about 1,350 bp in ize. This clone was referred to as HA-15/2. It exhibited a weak differentiation-inducing effect for which however, no statistical significance was achieved in 3 experiments performed (Fig. 11). Because of its size it served as a radiolabeled probe in the further detection operations Sperformed by hybridization (Southern blotting, Norther io n s blotting, additional screening of the gene library) although it was assumed that it was an incomplete clone.
Establishin a CDNA librar in lambda ha es Assuming that the strongest eda activity was derived from a 2.2 kbp mRNA species which is particularly highly expressed in NIH-3T3 cells (se b1o p a r t i c u l a r l y h i g h l y expressed in NIH-3T3 cells (see below) CDNA was transcribed from NIH-3T3 poly(A)+ mRNA and Size-separated on a nondenaturing gel. The 1,900 to 2,500 bp region was cut from the gel, purified, and cloned into Lambda Zap l11 phage. However, all eda clones obtained by this procedure were smaller than 1,500 bp.
Southern blot analysis Analyses of genomic DNA from the spleen of C3H mice in hybridization experiments using the 1,350 bp probe HA-15/2 (BamHI fragment) showed 4 bands of 6.5, 5.7, 3.8, and 2.1 kbp particularly after digestion of the DNA with Sacl. Using EcoRI, 2 weak bands at 7.5 and 5.5 kbp were obtained in the DNA of WEHI-3 cells. The observation that also human genomic DNA obtained from cell line K562 after digestion with E no
RI
showed a band at 7.5 kbp and another band at 6.5 kbp (Fig.
12) was important in this respect. Since highly stringent washing conditions were used (up to 2 x 30 m 0. s t r i n g e n t
SC/
DS at 60 0 c) some homology should be present between the iy-sn ewe h 28 murine and the human gene. Fig. 12 proves that it is possible to obtain the human eda gene from a gene library using the radiolabeled murine probe.rary using the Studies of the eda gene expresson The experiments were carried out using the approx. 1,350 bp BamHI fragment of HA-15/2 as a probe. The Northern blot analysis after stringent washing (up to 20 min 0.1 x SSC/ l SDS and 60 0 C) reveals several bands of varying size showing different hybridization intensities (Fig 13). Single bands of more than 5 kbp vary between the cell types (see below).
Generally, the band with the highest intensity appeared at 2,200 bp with further bands in varying intensities appearing at 1,750 bp, 1,350 bp, and 1,200 bp. Fig. 13 shows that all of the bands hybridize equally well to the complete probe (BamHI fragment of HA-15/2) and to the 500 bp of the r end of this probe, but that in contrast the 200 bp of r the 5 nd end of this probe gives a detectable signal only with the larger bands of more than 5,000 bp and with the 2,200 bp band. From this it may be concluded that the large bands contain at least portions of all of the smaller bands and the 2,200 bp band as well as bands 2,200 bp contain a detectable portion of the 5' end of the probe while the 3 end of the probe is common to all bands. An examination of several mouse strains regarding the band variations in the 2 cell types NIH-3T3 and M2-10B4 (Fig. 12) revealed that within a strain all bands are identical in different tissues but that the bands vary between the mouse strains. NIH-3T3 ells are fibroblasts derived from Swiss mice while the bone marrow fibroblasts of line M2-10B4 are derived from B6C3F mice (Lemoine et al., 1988). Analogously, on the genomic DNA level there are a number of differences in restriction between individual mouse strains (data not shown).
Expression attern of eda in normal mouse tissues The expression pattern of different tissues was studied with C3H mice. The highest expression was found in normal N thymus (approx. similar for adult and fetal (d and in 3 nd i 29 fetal liver (d 15). Next with regard to the amount of expression was the spleen while the expression in normal bone marrow was significantly weaker A very weak expression which in s o m e °ccslons was only detect er y w e a k e xpr e s sion which in some Occasions was only detectable at the poly(A)+ level was present in all organs and tissues examined ch as liver kidney, intestine, brain, and placenta. In uc ntrast rimary mast cells isolated from bone marrow by 4 weeks f ulture of the bone marrow in the presence of IL-3 4 weeks of cusitive than normal spleen cells.ositive Ex ression attern in murine cell lines The amount of expression in the cell lines varied greatly but generally was stronger than in the Primary tissues. Among the non-malignant cells the embryonic fibroblast line NIH-3T3 e c e l l s t h e the ioblast line N-3T3 revealed a strong expression while the L929 fibroblast line almost showed no expression at all.
A median expression was observed for the M2-10B 4 bone marrow fibroblast line. Very strong expression was found for the
T
helper cell line TSI-C3 while for the EL-4 thymoma cell line almost no expression was observed. Myeloid
FDCP-
1 and 32DC123 cell lines as well as the 138 -8A mast cell line showed only weak expression. Generally, the cell lines established from murine malignant hematopoietic tissues had a strong to very strong expression. This was obvious for WEI-3 cells, DA-3, and NFS-61 (all cell lines derived from murinels, leukemias).om murine Ex ression attern in man human lls detect eda expression in human cells although With considerable background. The background relates to a strong o-hybridization of ribosomal 28S RNA so that stringent washing for up to 20 min in 0.2 x SSC/O.1% SDS at 6 00C has to be carried out to detect the bands of interest. In particular, a transcript of 2.5 kbp was found in the poly(A)+ RNA of Jurkat cells, and also in K562 total cellular RNA a weak band of that type can be observed (Fig, 14). Regarding the lower molecular weight eda mRNA spci, 4 now only species, up to now only 30 in one case of a T-CLL a distinct band of 1,100 1,200 bp was found with the murine probe (data not shown).
Studies of eda mRNA exression in murine sleen cells During in vitro incubation (1 x 106 cells/mi in RPMI 1640 containing 10% FCS and the usual additions) spleen cells lose their eda expression within a few hours. Upon addition of anti-T cell receptor antibody or concanavalin A (Fig. or also of TPA a slight increase of the 2,2 kbp band as well as the larger bands is achieved within one hour while after only 4 more hours those transcripts have again decreased with accumulation of eda degradation products of defined sizes S400 bp) predominating without stabilization of the normal transcripts. These effects largely ear off within a period of 24-28 hours.
However, a stabilization of eda mRNA in pleen cells in vitro was achieved upon performing a mixed spleen cell reaction for 3 days using in each case x 106 nonirradated and untreated CBA and CBL cells/ml (Fig. 16). Again, no mRNA stabilization was achieved if the CBA Spleen cells were Previously irradiated with 15 Gy and also if CBL Spleen cells alone were cultivated in vitro.
Involvement of eda in the allogenic reaction which interestingly took place only if stimulation was carried out with non-irradiated cells (Fig 16) as confirmed in an in vivo model of acute graft-versu wa c o n f i r me d in an in vivo model of acute graft-versus-hos (gvh) disease. If 5 x 107 CBL spleen cells are injected into (CBA x CBL) F, hybrids after carrying out a 9 Gy whole body irradiation a severe gvh disease develops. We found that in the course of this disease on day 6 after transplantation in the spleens of the recipient animals an increase in eda expression by approx.
7fold occured as compared to the controls in hich theby approx.
expression decreased (Fig. 17). This reaction was restricted to spleen presumably because in the Other organs the percentage of inflammatory cells participating in the gvh disease relative to all cells was too law to bring the gva detectable Increase In eda e oo low t o b r i n g a b o u t a etectable increase in eda expression in the Northern blot K analysis.
31 eda sequence analyses Analysis of the DNA sequence of eda or the different cDNA species, respectively, turned out to be difficult in particular because of the presence of many repeat structures as well as AT- and GC-rich stretches. A a n sensus sequence was derived from different clones of the PRensu d Lambdaence Zap II® libraries (Fig. 18) which most likely is a part of the 2.2 kbp CDNA. Fig. 19 shows the presumable structure of the 2.2 kbp sequence which has not yet been completely analysed. Three different repeat types are indicated by R R2, and R3. The regions indicated by bold lines h d i c at ed b y R en confirmed with respect to their relative ssi However e Sit is not clear whether the approx. 300 bp which are still e r missing reside in the beginning part of the sequence as indicated in Fig. 18 or whether another repeat of already known sequence is presenta N o t e r repeat of already known sequence is present. No open reading frame was found, the frequent stop codons (as indicated by a m e a o u n referably in the codons at the beginning of the repeats Not all of them are represented in Fig. 19. The larger repeats occuring in this sequence are summarized in Table 3.
Fig. 20 shows the sequence of clone DY-8 in each of the upper of the 2 rows. This sequence contains an open eading frame starting with the boxed ATG at Position 155, however the activity of this clone after transfection into Cos cells is not strong enough to suggest that this may be the critical end of the open reading frame. The onsensus sequence ith the presumptive 2.2 kbp eda sequence of Fig. 18 starts at Position 74. Thus, only the first 73 bases at the beginning represent DY-8 specific sequence Sias e s a t t h e b e g i n n ing represent DY-8 specific sequence. Since the 5- end is not unambiguously defined a longer reading frame has been created by inserting an ATG at position 52 (Fig. 20, lower row) including the entire sequence in common with the 2.2 kbp eda sequence. In contrast to the shorter Open reading frame of DY-8 (534 bp eda) this has been indicated as 636 bp eda.
Transfection of eda sequences usinq vector RC/Cr
M
previous chapter) were ligated into vector Rc/CMV and stably U- and stably 32 transfected into human colon carcinoma cell line CX-2.
Supernatants of this cell line were obtained 6 weeks after transfection under permanent G 418 selection pon cessation of the antibiotic and tested for their ability to induce the differentiation of murine erythroleukemia cells of line B8/3.
Fig. 21 demonstrates that similar to the results hown in 8 Fig. 10 the 534 bp eda containing the open reading frame of clone DY-8 exhibits a differentiation-inducing activity on this cell line of a strength similar to that of the WEHI-3conditioned control medium while the longer fragment transfected (636 bp eda) has an activity hich is 15 2 dilution steps higher. w h i c h 2 Growth factor Pro erties of eda on cell line The human BL-70 cell line is derived from an EBVnegative Burkitt's lymphoma and has been established in culture by Lenoir et al. in 1985. In 1993, Falk et al.
performed a detailed study of this cell line and showed that up to a certain density it is not able to and s h o we d thabsence of stromal cells. However, exceeding a critical cell density the cells are able to proliferate free of stromal upport. As shown in Fig. 22 small volumes of th supernatant of a clone of cell line CX-2 transfected by the 534 bp eda are able to convert the density-dependent growth of the control into a density-independent growth.
Effect of eda on CD34+ rogenitors of human bone marrow In several experiments the effect of eda-containing supernatant on progenitors of human bone marrow was testedning (Fig. 23). Effects on early progenitors (mixed colonies in Fig. 23) as well as more mature progenitors (BFU-E and GM-CFC in Fig. 24B) are noticeable. They were directed to the bone marrow of a hematologically normal individual as well as bone marrow of a patient suffering from chronic myelog u a s b o n e leukemia (Fig. 23B). These effects may be interpreted both as effects of a growth factor and of a survival factor.
I t has been discovered according to the invention that e quality of the protein provided, i.e. its activities 33 depend particularly on the 3'end of the nucleotide sequence encoding the protein while the quantity of protein expression is affected by the 5' end. p t i n As demonstrated above it has not been possible to determine the exact 5' end. However, on the basis of the results described herein it is easily Possible for the skilled artisan to determine or to select, respectively the end(s) to enable a higher amount of expression.
The invention comprises all proteins having the properties described regardless of their appearance in animal or in human cells. The DNA and amino acid sequences presented are in part consensus sequences i.e. several sequences have been used to derive the sequence which leads to a continuous reading frame. It can not be excluded that the native protein differs from the polypeptide encoded by the consensus sequence.
Claim 1 of the present application characterizes the protein by 8 different features a) to The protein provided by the invention has to comply with at least the features and At least one or more of the additional features are fulfilled in preferred embodiments of the invention.
34 Table 1:- Percentae of reduction of EDA activit 1. Trypsin digestion: 50 1 ug/ml 30 mnin at 370C: 75.7%* 2. Cleavage of disulfide bonds: 50 Mn!"
DTT
2 h at room temperature 9-- 3. Heat inactivation: 60-C, 20 mlin: 0* 4. Heat inactivation: 80-C, 20 mfin 61.7% Freeze/thaw cycles (5 cycles): 7* C, 'Otokins without dif ferentato-nui activit on murine er throleukem" cells Cytokin I. 4 bDR~eat 855 CGTCCGCCGG TCACGGCCGC CGCCCCCAGC GACGTCACCC
AC
Repetition of 1248 1289 2. 5b Repeat 903 AGAAGCGGAC GCCGCGGTCA AGATGTCTCT GCCATGCCCA
CGGGACGCAC
953
GGACG
Repetition of 1304 1358 3. 81 bD Repeat 163 213 TAGTCCTGCC GTCGTCAATG GTTCTCTATG GGCTTTCAGA
GTGAGTG
GGAAGGcGGC CCCGAGGCAT GCTGGGAGTT
G
Repetitions of 82 162; and of 244 324 4. l 8 8bRep~et 398 GTTTCTCTGT ATAGACCTGG CTGTGGATTT TTCGCTAATT
CTTTTTTTTA
398 GCTTTATTTT TAATTTTTAC TTTTTCACAC AGGATTTCTC
TTTATAGCCT
448 TGGCTACCGT TTTTTCCCTA ATTATTCTCC TTTTCATTTT
GGTTTATTTT
498 TTTTTAATTT TGGTTTTTTT
AAGACAGG
Repetition of 526 705 385 b Reeat 1001 1051 1101 1151 1201 1251 1301 1351
GACCGCACCG
GCCCGCCCAG
GCACACGCAT
CCGCCGCGGT
GACCCTCC
CCACCGGTCA
CGTAGAAGCG
GACGGACGGA
CCGCACCCAC
GCACACWGG
CCGCAGG;ACC
CAAGATGTTC
CCGCTGGACG
CTGCCGCCGC
GACGCCGTGG
CACAGCACAC
CACACACG
CGCCGCACCC
ACCCGCCGCG
GACGGACGA
CCACAGTGAT
T'tAAGATGTC
AGGA
AGGACACACG
ACACAGCA
GCCAcGCAG;A
GTCAAGATGT
CGCACGCACG
TGTCACCCAcG
AGCCTGCGCC
CGGGCCCCGC
GGCAGGCCAG
CACGGACGAG
TGGCCACC
CCGTCAGCGT
A.AAGCACACA
Repeated only in single clones, does not appear in the consensus partial sequence
HEADLINE
ATCC CCL-24 K-56~2 (Chronic mye2.ogenous leukemia, hmn Current medium !Or Propagation: RpMI 1640, 90t: FSS, Iot The con:Lnuous cell line K-562 was established by Lozzjo and Lozzjo (Blood 45: 321-334, 1975) from the pleural effusion off a 53-year-old female with chronic myelogenous leukemia in terminal blast crises. The cell population has been characterized as highly undifferentiated and of the granul~ocytic series (Leukemia Res. 3: 363-370, 1979). Studies conducted by Anderson, et al., (Int. J. Cancer 23: 143-147, 1979) on the surface membrane properties led to the conclusion that the K(-562 was a human erythroleukemia line. The effect of inducers on su-blines derived from the original K(-562 cell line have been reviewed by Koeffler and Golde (Blood 56: 344-350, 1980). More-recent studies indicate that the K-562 blasts are multipotential, hematopoietic malignant cells that spontaneously differentiate into recoqniza-bl progenitors of the erythrocytic, granulocytic and monocytic series (Proc. Soc. Exp. Biol. Med. 166: 54-50 1981).
The K-562 cell line has attained widespread use as a highly sensitive in vitro target for the natural killer assay Natl.
Cancer inst. (Bethesda) 59: 77-83, 1977). Cultures from the
ATCC
stock have been show-n to exhibit this sensitiv, fo sesn human natural killer activity. 1iv o sesn Karyological studies on various K(-562 sublines have been classified into three groups by Dimery, et al., (Exp.
Hematol 1l: 601-610, 198)). The strain obtained by the ATCC mostclosely resembles the B population. Occurrence ofr the Philadelphia c-romosome, however, was of much lower frequency; none detected in 15 metaphases examined.
DEScRr:PT~--oN OF REPOSITORY REFERENCE SEED
STOCK
Number of Serial Subcultures from Tissue of Orig;n: Unknown.
Freeze Yediu=: Culture medium, 95%; dimethyl sulfoxide (DM50), antibiotic.free.
Viability: Approximately 85% (dye exclus io n).
Culture Mediu--: RPMI medium 1640, 90-t- FBS, 10%; antibio-ic-free.
Growth Characteristics of Thawed Cells: An inocu!Lum of 1-2
X
10(5) viable cells/mI in the above culture-medium at 37C results in a doubling time of 26-30 hrs over a 5- to 7 -da y period provided fresh medium is added at 48-72 hr inter-vals. Pl~ating Effciency: The cells cannot be plated.
Morphology: Lymphoblast-like.
Karyology: Chromosome Frequency Distribution 50 Cells: 2n 46 ells: I 1 10 12 7 13 3 2 1 Chromosomes: 64 65 66 67 68 69 70 72 77 The steml1ine chromosome number is triploid with the 2S component occurring at Fif~een markers (Hi and M(15))"occu4rred in n e a r l a l l S e z a m h a s e s p n a e u n n s e c c d c n r c Occ'rrd'but rarely. Unstable markers wer als direltrisenTh X was di'somic, and N9 was nullisomic. eysen h Ster illtv: Tes:s for mycoplasma, bacteria, rungi rto n viruses were nega tive. pooo n PN Species: Confirmed as human by isoenzymology.
PAT
37 Tumorigenicity: Tumors developed in 30-35 days at 33 1/3t frequency in nude muice inoculated subcutaneously with 10.(7) cells.
ESNA: Negative.
Reverse Trailscriptase: Not detected.
Erythrocyte Rosette Test: E, EA, 34t; EAC, 2%.
liLA Profile: Not detected.
Isoenzyies: Afl, 1; ES D, 1; GLO-l, 2; G6PD, B; PGM.L, 0; PGX3, 1;~ Ne-2, 0.
Submitted by: H.T. Hiolden, NCI, NIX, Bethesda,
MD.
Prepared and characterized by: ATCC, Rockville,
MD.
Price Code: J
.HEADLINE
ATCC TIB-68 WEHI-3 (Myelomonocyte. mouse)
.TEXT
Passage Frozen: Unknown. Current medium for propagation: Iscovers modified Dulbecco's medium with 2 -mercaptoethanol, FBS, 10%. Additional Information: This macrophage-like line was derived from a BALB/c mouse. Growth of these myelomonoci e w leukemia cells is inhibited by concentrations of LPS as low as ng/ml and blocked completely at higher concentrations.
Dextran sulfate also inhibits growth at concentrations of 0-40 mcg/ml. Production of the constitutive enzyme lysozyme and of granulocyte colony-stimulating activity (CSA) by WEJI-3 is unaffected or actually enhanced during inhibition of cell growth.
Latex beads are phagocytized but not toxic. Zmosan and BCG are also phagocytized and block growth. The cell surface bears receptors for imnunoglobulin and complement. W exhibits only weak effector activity against sheep erment. oyes or the tumor target EL-4 in t oeep erythrcytes or the tumor target EL-4 in an antibody-dependent cell mediated cytotoxic system. References: Cancer Res. 37: 546-550, 1977; Imunol.
119: 950-954, 1977; J. Exp. Med. 143: 1528-1533, 1976; ibid., 154: 1419-1431, 1981. Submitted by: Laboratory of M. Cohn, Salk Institute, La Jolla,
CA.
Price Code:
J
BUDAPEST TXPATY OW1tiE ITENATIONAI.
RECOCGMTON OF TIE DEPOSIT OF 161CROORGANIShIl FOR THI: PURPOSES 0? PATENJT PRtOCEDURE wit4TRAMINAL FORIA GSF-Iflstitut f~r Experimentelie Hdmatologie marchioliristr. 81377 Manchen R.ECE1I'T IN THE CASE OF AN OIINAL DEPOSIT iued Pursuant to Rule 7.1 by the INrhRNATIONAL DEPOSITARY AUTHORITY identified at the bottom of this pa~ge 1. 1t)FNTIFCATION OF THL MICROORC)ANISM Iderntiction rtfercncce:iven by the DF-POSrI*OR: Accession number given by the L88/s INTERNATIONAL DEPOSITARY AUTHORITY: DSM ACC2056 11, SCIENTIFIC D1ISCRl'rION AND/QKR PROPOSED rAXoNOMIC DEFSIGNATION The rnicroor~aisin idcntified undcr 1. above was sccompinied by: (3a scientitit; description (X x uroposed axtanornic designation (Mark with a cross where appliethtc).
Ili. RECE~IPT AND ACCEPTANCE This Intcrnational Depositary Authority 3ccepts the micnmoranism identified under 1. shove. which was rcecived by it on 19 93 -0 1 -27 (Date of the original depouit)'.
IV. RE-CEIPT OF KEQUFST FOR CONVERSION The microorganismn identified under I above was rceived by this InternatiOnal Depositary Authority an (duze of original deposit) and a request to conlvert the origiual deposit to a deposit under the Budapest Treaty ym received by it on (date or recipt or request 'thr conversion).
V. INTERNIATIONAL DEPO SITARY AUTrHORIlrY DSMZ-DEUTSCHI-. SAMMLUNG VON MIKCROORtGANi.%mEN UND 7.ELLKULTuxia GmbH4 Masetierodcr Weg lb 03-311124 Braunschweig Signanar(s) of Person(%) having the power to represent the lflmational Deposiway Authrity or uf authorized offecaI(s): (6C,24 le: Date: 1997-03-06 DuflAPEST TWATY ON TkW RnTfltATM*"L RM.OCNMfON OF THE OW~ OF COugi~ FOR T14 M UPCI5 OF FAUNT FROCHUREJ INTEB4AT!ONAL FORM Experimentelle 1{~matologie Marclxioninistr. 81377 M'Qnchen VIABIUTY STATEMENT issucd Punugi: to RgIk 10.2 by the 2NTERNATIONAL DEPO.SITA3RY AUTHORITY Wfetiid at the bottom of ti pftC 1. DEPOShITOR IL 13DNIFICATTON Of TMj MICROORGANISM Name: GSF-Instjtut fiar Experimentelle H~matologie Address: Marchioninistr. 25 81377 Minchern Aicecsifl number given by the INTERNATIONAL DEPOSITARY AUTHORITY: OSM ACC2056 Dmze of the dcpnsit of (he trzn.ii'cr: 1993-01-27 fi-VAB IITY STAIIMN The viability of the micrortism idCautiid usider It Khove was tested on 1993 -01.-27 On (hat dote, the said. inirocirrwissin w.
viable nolonger viuabic rV CO.NDITIONSi UNDER WHICHJ THe VIASII.ITY TEST HAS B3EEN pERFOR3I{ED4 V. INTERNATIONAL DE~POSITARY AUMTORITY Name: DS';Z-DEUTLC- SAMMLUNG VON MIKROOKCANISN,,IFN UND ZF.LLKULTUJREN Crnbfl Address; Maselierodcr Weg lb 0-38124 Hrounschweig S3ignaUre(s) of' pemn(S) having the goWeF to represent the Inteniationaj Deposaioy Authority or of authorizcd afficiul(s): c-lv .C IN Dat- 1997-03-06 Indicate the daft of grgn eoi r. where I a wd~i r4t~~ Mbe AC the most recent relevant d(date oAC f the new dePosit C daot at the Unflife).
In the cascs rarred to in Rule 102(s) (ii) and (iil), refer to the most recent viability test.
ark with a cross the 'applicable huit.
rill in if the intormati has been requested and tf die results of tbe Not an norprwe.
11%Ao6FIWI/ftPFQ Igote 0;jqe) 41106
I
Literatur Chomczynski p, Sacchi N: Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction Anal. Biochem. 162, 156-159 (1987) Cullen BR: Use of eukaryotic expression technology in the functional analysis of cloned genes p 684-704 In: Methods in enzymology, vol.. l5: Guide tooleul 684-704. I n Me t h o d s in enzymology, vol. 152: Guide to molecular cloning techniques (eds. Berger SL, Kimmel AR), Academic Press, New York, 1987 Dexter TM, Garland J, Scott D, Scolnick Metcalf D: Growth of factor-dependent hemopietic precursor cell lines. J. Exp Med. 152, 1036 (1980) Dube SK, Pragnell IB, Kluge N, Gaedicke G, Steinheider
G,
Ostertag W: Induction of endogenous and of spleen f s-forming viruses during dimethylsulfoxide- in d differentiation r of mouse erythroleukemia cells transformed by spleen focusforming virus. Proc Nat. Acad. Sci. USA 72, 1863-1867 (1975) Falk MH, HQitner L. Milner A, Gregory CD, Bornkamm GW: Irradiated fibroblasts protect Burkitt lymphoma cells from apoptosis by a mechanism independent of BCL-2. J. Cancer 485-491 (1993) Cancer Farrar JJ, Howard M, Fuller-Farrar Paul WE: Biochemical and physiochemical characterization of mouse B cell growth factor: al a lymphokine distinct from interleukin 2. J. Immunol. 131 1838-1842 (1983) Greenberger JS, Eckner RJ, Sakakeeny M, Marks p, Reid D, Nabel D, Hapel A, Ihle JN, Humphries C: Interleukin 3-dependent hemopietic progenitor cell lines. Fed. Proc. 42 2762 (1983) L o .4 27 2 (9 3 Guilbert LJ, Iscove NN: Partial replacement of serum by sele- nite, transferrin, albumin and lecithin in haemopoietic c by selecultures. Nature 263, 594-595 (1976) Hanahan D: Studies of transformation of Escherchia coli with plasmid. J. Mol. Biol. 166, 557-580 (1983) Holmes KL, Palaszynski E, Frederickson TN, Morse iII HC, Ihle JN: Correlation of cell-surface phenotype with the establish ment of interleukin 3-dependent cell lines from wildmouse murine leukemia virus-induced neoplasms Proc. Nati Acad. Sci.
USA 83, 6687-6691 (1985) Hiiltner L, Moeller J, Schmitt E, Jger G, Reisbach G, Ring
J,
Ddrmer P: Thiol-sensitive mast cell lines derived from mouse bone marrow respond to a mast cell growth enhancing activity different from both IL-3 and IL-4. growth enhanl 142, 3340-3446 (1989) Immunol 142, 3340-3446 Ihle JN, Rein A, Mural R: Immunological and virological mechanisms in retrovirus induced murine leukemogenesis. In: Advances in viral oncology, vol. 4 (G Klein, 95-137, Raven Press, New York 1984 Inoue H, Nojima H, Okayama H: High efficiency transformation of Escherichia coil with plasmids. Giene 96, 23-28 (1990)mation Lemoine FM, Humphries RK, Abraham SDM, Krystal G, Eaves
CJ:
Partial characterization of a novel stromal cell-derived pre-B cell growth factor active on normal and immortalized pre-B cells. Exp. Hematol. 16, 718- (1988) immortalized pre-B Lenoir GM, Vuillaume M, Bonnardel C: The use of lymphomatous and lymphoblastoid cell lines in the study of Burkitt's lymphoma. IARC Sci. Publ. 59, 309-318 (1985)Bukitt's lymp- Lozzio CB, Lozzio BB: Human chronic myeloe eukem ell line with positive Philadelphia chromosome Blood 45,ukea cl- (1975)soe. Blood 321-33 Mosmann T: Rapid colorimetric assay for cellular growth and survival: application to proliferation and cytotoxicity assay.
J. Immunol. Methods 65, 55-63 (1983) Okayama H, Berg P:High-efficiency clonin f fulllength
DN
Mol. Cell. Biol. 2, 161-170 (1982)h Ostertag W, Melderis H, Steinheider G, KlugeN Dube S: Synthesis of mouse haemoglobin and globin mRNA in leukaemic cell cultures. Nature New Biol. 239, 231-234 (1972) Ostertag W, Crozier T, Kluge N Melderi H, Dube S: Action of on the induction of haemogl i synthesi o o in mouse leukaemia cells resistant to S-BUdR. Nature New Biol 243, 203-205 (1973) Ostertag W, Roesler G, Krieg CJ, Kind Cole T, Crozier
T,
Gaedicke G, Steinheider G, Kluge Ni Co l e T
C
r o z i e r
T,
Gaedicke G, Steinheider G, Kluge N, Dube S: Induction of endogenous virus and of thymidine kinase by bromodeoyuridne in cell cultures transformed by Friend virus Proc. Natl. Acad Sci. USA 71, 4980-4985 (1974) Ovejera AA, Houchens DP, Catane R, Sheridan MA, Muggia
FM:
Efficacy of 6-Diazo-S-oxo-L-norleucine and N
M
[N-y-Glutamyl 6 diazo-5-oxo-norleucinyll-6-diazo5oxo noleucine against experimental tumors in conventio Iorleucne against experimental tumors in conventional and nude mice. Cancer Res.
39, 3220-3224 (1979) Pruitt SC: Expression vectors ermitting cNA cloning and en- richment for specific sequences by hyi N c l o n i n g a n d e n Gene 66, 121-134 (1988)/selecion Rosenfeld C, Venuat AM, Goutner A, Gu4gang J, Chquet C, Troa F, Pico JL:An exceptional cell line established fro patient with acute lymphoid leukemia. Proc. Amestablished fromCancer Res 16, 1075 (1975) Amer. Assoc. C Res.
Sambrook J, Fritsch EF, Maniatis T: Molecular cloning A laboratory manual. Second edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor 1989 Sanger F, Nicklen S, Coulson AR: DNA seqencig with chainterminating inhibitors. Proc. Natl. Acade Squencing with chain- 5471tl (1977. Sci. USA 74, 5463- 5471 (1977) Takaue Y, Reading CL, Roome AJ, Dicke KA, Tindle S, Chandran M, Devaraj B: Limiting-dilution analysis of the effects of C~ l~ f yaSt i u a t D h y t o h e r n a o colony-stimulation factors ph tohemaggutinin, and hydrocor tisone on hematopoietic progenitor cell growth Blood 1611-1618 (1987) growth. Blood Thalmeier K, Meiner P. Reisbach G Falk M, Brechtel A, D6rmer P: Establishment of two permanent human bone marrow stromal cell lines with long-term post irradiation feeder capacity.
Blood 83, 1799-1807 (1994) Uyttenhove C, Simpson RJ, Van Snick J: Functional and structu- ral characterization of P40, a ouse lYcoprotein with T-cell growth factor activity. Proc. Natluse Alycprot in with T-cell 6938 (1988). Acad. Sci. USA 85, 6934- Warner NL, Moore MAS, Metcalf D: A traslanabl myelomono cytic leukemia in BALB/c mice: cytology, karyotype and muramidase content. J. Natl. Cancer Inst. 43, 90 p (1979) 6 (9 9 SEQUENCE
LISTING
GENERAL
INFORMATION:
APPLICANT:
NAME: GSF Forschungszentrm fuer Umwlt und Gesundheit GmbH STREET: Ingolstaedter Landstr.
I
CITY: Oberschleissheim COUNTRY: Germany POSTAL CODE (ZIP): 85764 (ii) TITLE OF INVENTION: Novel protein having at least diffeentiacion-inducing activity on Friend erythroleukemia cell lines (iii) NUMBER OF SEQUENCES: (iv) COMPUTER READABLE
FORM:
MEOItU TYPE: Floppy disk comPuT7R: IM PC compatible OPERATING SYSTEM:
PC-OOS/MS-OOS
SOFTWARE: Pacent' Release Version 41.30
(EP)
(vi) PRIOR APLICATZON
OATA:
APLZCATN NtMSBER: DE 196 12 463.9 .I-G DATE: 28-MA.1996 :NFORMATIN FOR SEQ ID NO: I: SEQUENCE
CHARACTERISTICS:
LENGTH: 1495 base pairs TYPE: nucleic acid STRANDENESS: single tOPOLOGY: linear (ii) MOLECULE TYPE: coNA to mRNA (ii) HYPOT~2TICAL.
'(ES
(iv) ANTr.SENS4E
NO
OvL) ORZCtyAL.
SOURCE.
ORCAd~frSM. Mus muscujus SEQCENCE OESCRrPTtON: SEQ rO NO: 1: CCGACCGTr-C CQACTTAA TGAGCC TCCTGTCTGC GGCGGGAAGA GAAGOcCrG TCGrGAGCCGG GAATGT= AcTTGTAr.G CGTACTCAAT~ GGTTCTCTAT GGCLA 120 AGTGACTOOc GGGAAGGcGG ccccGAr.GCA TGCTGGGAGT TGTAGTCCTG CCG;TCTA Lao TGGTTCTCTA TGGCTTCA GAGTGAGTGG CGGGAAGGCG GCCCCCAGC ATCTCAC; 240 TTGTAGTCCT GCCATAGTCPA ATGGTTCTCT ATGGGCITTC AGACTGAGTG GCGGAC 300 GGCCCCGAGG CATGCGGA GTTGCAGCQC CATGTTrrA AGCACGCGrr TCTCTGTATA 36~0 GACCTGGCTG TGGATTTTTC GCTAATTCTTz TTTTTTAGCT TTATTTA TTTTTAT.T 420 TTCAA ATTTCTCTTTI ATAGCCTTGG CTACCGTTTT TTCCCTAT ATTCCc.T 48a0 TCATTTTGGT TTATTTTT TTAA.TTTTGG TTTTTTTAAG AC-AGGGTrTC ICTG;TATAGA 540 CCTGGCTG-, GATTTCTCAC. TAATTATTTT TTTTAGCTTrT ATT-TTAATT TTTACTT-.... 600 CACACAGGAT' TTCTCTTTAT AGCC-TGGCT ACC-W-TTTTT CCC;TAATTAT TCTTATTT-,-c 6 ATTTTIGGT'.rT ATrTTTTT, TTTAA TT GATTTTGGAG ACAGGGTTTC TCT-iTTAGC... 720 GCAGCTAT-GG T"TT-CTGCCCT AATTATTCTT GTCCTrATTT GTAkATTT.AT TCTr~~~ 780- ATTTAATTTA TAZATTTTGTT GTAAGTTTTT CTGTGGGCGT GAATGGAAAG TCTAACCCcGT 840 GTTTCc-*T TCAGCGTCCGw CCGGTCACGG CCCCOCCC, CAGCGAC-TC ACCCAC.:CGC 900 GCAGAACCG ACGCCGCGGT CAAGATGTCT CTGCCATGCC CACCGGACCC ACGGACCAC 960 GGACGGACGG ACGGACTCA CAAGGTAGGA AGCCTGCGCC GACCCCACCG CCCCACCCAC 10 CCAGCACACc AGGACACACG CGGGCCCCCC GCCCGCCCAG CCACACCG CACACC-C 1.080 ACACACCGGA GGCAGGCCAG GCACACGCAT CCGCAGGACC CCGCACCC GCCACGCAGA 121.40 CACGGACGAG CCGCCGCOGT CA.AGATGTTC ACCCCGCCCC CTCAAGATGT .ATGTGCCACC 1.200 GACCCTCGCC CCGCTGCACC GACGCACGGA CGCACGCACG CCGTCACCGT CCACCGC7CA 1260 /CTGCCCCGC CCACACTGAT GTCACCCACG AAAGCACACA CCTAGAACC GACCCCGTGG 1.320 TCAACATCTC TCTOCCATCC CCACAGGACG CACCCACCCA CTCCACAAGC TGCGCCGT: 1.380 CCCACCCCC CCACCACCGA GCCATTCTCA CGAGGAACG AGCACCCCAA CACCCCCTrA L44 &0 7 2 A CAC ACATGTCCCC CTCAAT A TTO CA TTGA AAT GAAAAA AAA 4 S fIFORMATION FOR SEQ 11) NO: 2: SEQUENCE
CHARACTERISTICS:
LENGTH: 71S base pairs TYPE: nucleic acid STRANDElNEsS: single CD) TOPOLOGY: linear (ii) MOLECUILE TYPE: cDNA to mRNA (iii) HYPOTHETICAL:
YES
(ix)
FEATURE:
NAME/Ky:
CDS
LOCATION:1 5 S 68 (xi) SEQUEN~CE DESCRIPTION: SEC. ro 2: CGCOCCCCC CGOOATCcCC AGCTGCCGCC GC-CCCGCCC GCCCGCCOO OGCCCCCOCT GCAGAACCGI CACCOT-,CC CGGTCACGO GCC~CC GCCT 2 CAOAAGOGA CGCCGCGGTC AAGATGTCTC TGCC ATG CCC ACG OGA CGC ACC 172 Met Pro Thr Gly AzU 7h:r GAC Gca, COO ACC GAC GGA CTG ACT CCA CAA GGT AGG AAG CC'T GC CC3 220 Aso Ala
A:
9 Thr Asp Gly Lau Thr Pro Gin Gly tLYs Pro Ala Pro ACC GCA CCG CCG CAC CCA C 'CA CAG CAC ACA GGA CAC ACr, CGG CC CCG 26a Thr Ala Pro pro His pro pro Gin His Thr Gly His Thr Arg Ala Pro 2S 30 CGC CCG CCC AGO CAC ACG CG CAC ACA CO CAC ACA CG CAG GCA OGC 316 Arg Pro Pro His Thr Ar; His-Thr Ar; His Thr Ar; Gin Ala Clv 45 so CAG GCA CAC GCA TCC GCA GCA CCC 0CC GCA CCC GCC ACC CAC ACA CGG36 Gin Ala His Ala Ser Ala Oly Pro Ala Ala Pro Ala Th: Gin Thr Ar; 60 65 ACC ACC CCC CCC COT CAA CAT OTT CAC CCC CCC COG TCA AA TOT
ATC
Thr Ser Arg Ar; Oly Gin Asp Val His Pro Pro Ar; Ser Ar; Cys Mac 80 as CAC CCA CCC TCC CCC COC TOG ACC GAC GGA CGC ACC COCC CA Cc46 CYSs L Pro Ser Pro Ar; Trp Thr Asp Oly Ar; Thr Ar; Ala Ar 9 CGT CAG CGT CCA CCG GTC ACT CCC 0CC 0CC CAC AGT GAC GTC ACC
CAC
Arg Gin Arg Pr Pr'o Val Thr Ala Ala Ala His Ser Amp Val Thr His 105 110- GAA AGC ACA, CAC GTA GAM 0CC GAC 0CC GTG GTC AAA; ATC Glu Ser Thr His Val G1u Ala Asp Ala Val Val Lys Met 120 125 130 TCC CCA CAG GAC GGA CGG ACG GAC TCC ACA AGG TGC GCG Ser Pro Gin Asp Gly Arg Thr ASp Ser Thr Arg Cys Alat 135 S TCT cTOG
CCA
Ser Lau Pro TOT cGC
COA
Cys Arg Ar; 556 604 652 698 GGC CGC CAG OAT OGA 0CG AT? CTC ACC GAG Oly Ar; Gin Asp Gly Ala Ile Leu Thr Glu 155 160 GGC CTO ACT GCG TAC AGA AAT GCC CCC
CCT
Gly Leu Thr Ala Tyr Asn Ala Pro pro GAA GGA GCA CGC CAA C;,o 01u Gly Ala Arg Gin 0Tn 165 CAA TAA AATTOC-AGTTr- Gin GAAATGGAA
AAAAAA
INFORMATION FOR SZEQ NO: 3.: SEQUEVCE
CRARACTEIR:STICS;
LEG~:173 amino acids TYPE: amino acid TOPOLOGy: linear (iMOLECULZ TYPE: protein (x)SEQJ'ENC7 DESCR!PTZON. SEQ 10 NO: 3: Met Pro Thr Gly Ar; Thr Asp Ala Ar; Thr Asp Gly Leu Thr Pro Gin S 10 1 Gly Ar; Lys Pro Ala Pro Thr Ala Pro pro HisPrPo T HiTh 2 0 2 53 0 GIV His Thr Ar; Ala Pro Ar; Pro Pro Ar; His Thr Arg HisTr r 40 45 i h r His Thr Ar; Gin Ala Gly Gin Ala His Ala Ser Ala Gly Pro Ala Ala 50S5 Pro Ala Thr Gn Thr Arg Thr Ser Arg Ar; GLY GIn Asp Val His pr 49 Pro Arg Sor Arg Cs Met Cu His Arg Pro So Pro Ag Trp Thr Asp 90 Gly Arg Thr Arg Ala Arg Arg Gln Arg Pro Pro Val Thr Ala Ala Ala 100 0la His Ser Asp Val Thr His Glu Ser Thr His Val Glu Ala Asp Ala Val 115 120 125 Val Lys Met Ser Lu Pro Ser Pro Gin Asp Gly Arg Thr Asp Ser Thr 130 135 140 Arg Cys Ala Cys A~r Arg Gly Arg Gin Asp Gly Ala lie Leu Thr Glu 14S ISO 155 160 Giu Gly Ala Arg Gin Gln Gly Leu Thr Ala Tyr Arg Asn Ala Pro Pro 165 170 175 Gln INFORMATION FOR SEQ ZD NO: 4: SEQUENCE
CHARACTERISTICS:
LENGTH: 636 base pairs TYPE: nucleic acid STRANDEDNSS: single TOPOLOGY: linear (ii) MOLECULE TYPE: CONA to mRNA (iii) HYPOTHETICAL:
YES
(ix)
FEATURE:
NAME/KZY:
CDS
LOCATION:L..636 (xi) SEQUENCE DESCR:?TrON: SEQ r0 NO: 4: ATO G0 CTG CAG AAC CGT GAC COT CCG CCG GTC ACO GCC 0CC GCC CCC 43 Met Oly Leu Oln Asn Arg Asp Arg Pro Pro Val Thr Ala Ala Ala pro ISO 135 1.90 AGC GAC TC ACC CAC ACC CC AGA AGC CA CC COC GOT CAA CAT GTC Ser Asp VaL Thr Hs Thr Ag Arg Ser Gly Ag Arg Gly Gin Asp Val 200 205 210.
CC ATO CCC ACC GA COC ACC GAC OCA COO ACO CAC OGA CTO ACT Ser Ala Met Pro Thr Cly Arg Thr Asp Ala Arg Thr Asp ClyLo N 21.5 220 CCA CAA Pro Gln GGT AGO AAG CCT GCG CCC ACC OCA CCG CCG CAC CCA CCA
CAG
Cly Ar 3 Lys Pro Ala Pro Thr Ala Pro Pro His Pro Pro Glrn 230 235 240 CAC ACA GCA CAC ACG COG GCC CCC CGC CCG CCC AGO CAC ACG CC;
CAC
His Th: Gly Hi~s Thr Ag Ala Pro Ar; Pro Pro Ar; His Thr Ar; His 245 250 255 ACA COG CAC ACA CGG CAG GCA 0CC CAG OCA CAC GCA TCC GCA GOA
CCC
Th: Ar; His Thr Ar; Gln Ala Gly Gln Ala His Ala Ser Ala Gly pro 260 26S 270 GCC GCA CCC GCC ACG CAG ACA COG ACG AGC CCC CCC OT CAA GA.T
OTT
Ala Ala Pro Ala Thr Glxn Th: Ar; Th: Ser Gly Gin Aso Val 275 280 285 9 CAC CCC CCC COG TCA AGA TOT ATG TGC CAC CGA CC-C TCG CCc CGC
TOG
His Pro Pro Ser Cys mec Cys His Ar; Pro Ser Pro 7Trm 295 300 ACO CAC GCG Thr Aso Gj GCC GCC CAC Ala His 325 CCC CTC OTC Ala Val Val 340 TCC ACA
AGO
Ser Th: Arg 355 kCOG ACG CCC CA CCC COT CAC CCT CCA CCC CTC ACT. GCC Th: Ar; Ala Ar; Cmn A:ro Pr?-.aN:A~ 310 315 320alT z l ACT' CAC GTC ACC C-2C GAA AGC ACA CAC GTA CMA cC
GAC
Ser Aso Val Thr His Glu Se: Thr His Val Clu Ala Aso 330 335 MCACTCT CG CCA TCC CCA CAG GAC rCA CCG ACO
CAC
Lys Mac Se: Leu Pro Se: Pro Gin Asp ClY Ar; Thr Aso 345 350 rOC C TOT CCC CGA CCC CCC CAC CAT CCA C AT?
CT,
:Ys Ala CYs Ar; Cly Cin Asp Cly Al 1~ e 360 365 la370L, 192 240 288 336 34 432 480 523 576 524 niLAA GGA CCA CCC CAA CAC CGC CTG AC? CC TAC T!"hr Glu Clu ClY Ala Cin GTn Cly Leu Th: Ala Tyr 375S8 CCC CC? CAA TM Pro pro Gin AGA MAT C- Asn Ala 385 (11 SEQUENCE
CHARACTERISTICS:
LNorTH: 212 amino acids TYPE: amino acid TOPOLOGY: linear (ii) MOLECLE TYPE: protein (xi) SEQUENCE DESCRIPTION: SEQ ID NO: Met Giy Leu Gin Asn Arg Asp Arg Pro Pro Val Thr Ala Ala Ala Pro 1 S 10 is Ser Asp Val Thr His Thr Arg Arg Ser Giy Arg Ar; Gly Gin Asp Val 25 Ser Ala Met Pro Thr Giy Arg Thr Asp Ala Ar; Thr Asp Gly reu Thr 40 Pro Gin Gly Ar; Lys Pro Ala Pro Thr Ala Pro Pro His Pro Pro Gin so 55 His Tr Gly His Thr Arg Ala Pro Arg Pro Pro Ar; His Thr Arg His 70 7S Thr Arg His Thr Arg Gin Ala Gly Gln Ala His Ala Ser Ala Gly pro Ala Ala Pro Ala Thr Gin Thr Arg Thr Ser Arg Arg Gly Gin Aso Val 100 105 110 His Pro Pro Ag Ser Arg Cys Met Cys His Arg Pro Ser Pro Arg Trm 1IS 120 12S Thr Asp Gly Ar; Thr Ar; Ala Arg Arg Gin Arg Pro Pro Val Thr Ala 130 135 140 Ala Ala His Ser Asp Val Thr His Giu Sec Thr His Val Glu Ala Asp 145 150 155 Ala Val Val Lys Met Ser Leu Pro Se: Pro Gin Asp dy Arg Thr Aso 165 170 175 Ser Thr Ar; Cys Ala Cys Arg Arg Gly Ar; Gin Asp Gly Ala r1 e.eu 180 18 190 Thr Glu Glu Gly Ala Ar; Gin Gln Gly Leu Thr Ala Tyr Ar 3 Asn Ala 200 205 Pro Pro Gin INFORMATION FOR SEQ 10 NO: 6: iiSEQUENCE
CHARACTERISTICS:
LENGTH: 42 base pairs TYPE: nucleic acid STR.ANDEDNESS. single TOPOLOGY: linear (ii) MOLECULE~ TYPE: CDNA to mRNA (iii) HYPOTHETICAL:
YES
(iv) ANTI-SENSE: No (vi) ORIGINAI,
SOURCE:
ORGANISM. Mus MUSCUIUS (XJ) SEQUENCE DES CRIPTION; SEQ 10 NO: 6: CGTCCGCCOGG TCACGGCCOC CGCCCCCAGC GACGTCACCC
AC
42 :NFORMATZON FOR SEQ 1:0 NO: 7: SEQUENCE
CHAR.CTERZSTICS.
LENGTH: SS base pairs (3 TYPE: nucleic acid STRANOEDNESS: single TOPOLOGY: linear (ii) MOLECULE TYPE: cDNA to mRNA (iii) HYPOTHETA.:
YETS
(iv) ANTI-SEN-SE. No (vi) ORIGINAL
SOURCE:
ORGANISM: MUS musculuS (xi) SEQUENCE DESCRIPTION: SEQ ID NO: 7: AGAAGCGGAC GCCGCGGTCA AGATGTCTCT OCCATGCCCA CGGACGCAC OGACO INFORMATION FOR SEQ ro NO: 8: SEQUENCE
CHARACTERISTICS:
LENGTH: 8L base pairs TYPE: nucleic acid STRANDSONESS: single ()TOPOLOGY: linear (ii) MOLECULE TYPE: CONA to mRNA (iii) HYPOTHETICA.L:
YES
(iv) ANTI..SENSE: No (vi) ORIGINL
SOURCE:
ORGANISM: Mus musculus (x4) SEQUENCE DESCRIPTION: SEQ ID NO: 8: TAGTCCTGCC GTCGTCAATG GTTCTCTATG GGCTTTCAGA GTGAGTGGCG GGAAGGCGGC CCCGAGGC-3T GCTOGGAGTTr
G
rNFORMATION FOR SEQ 10 NO: _9: SI SEQtUNCE CF-kRACTERZSTICS: LE&NGTH; 178 base pairs TYPE: nlucleic acid ST-RANDEDNESS: single TOPOLOGY: linear MOLECLE TYPE: c0NA to URNA (iii) HY?07tfETICAL.
YES
(iv) ANTr-SENSE: No (vi) ORZGNL
SOURCE:
ORGANISM: Mus MUSCUJus (xi) SEQUENCE. DESCRIPTION. SEQ ID No: 9: CTTTCTCTGT ATAGACCTGG CTOTOGATTT TTCGCTAATT CTTTTTTTTA GCTTTATT7~T TAATTTTTAC TTTTTCACAC AGGATTTCTC TTTATAGCCT TGGCTACCG'& TTTTTCCCTA 1.20 ATTATTCTCC TTTTCATTTT GGTTTATTTT TTTTTAATTT TGGTTTTTTT AACACAGG 1.79 3NFORATON FOR seQ rO NO: Wi SEQUENCE
CHARACTERISTZCS:
LEMGTH(: 38S base pairs TYPE: nucleic acid STRANDEDNESS. single TOPOLOG;Y: linear (ii) MOLECULE TYPE: CDNA to MRNA (iii) HYPOTHETICAL:
YES
(iv) ANTIsESE: No (vi) ORIGINL~
SOURCE:
ORG3ANISM. Mus musculus SEQUENCE DESCRIPTION: SEQ In NO: AGGAAGCCTG CGCCGACCGC ACCGCCGCAC CCACCACAGC ACACAGGAC3 CACCCGC:C CCGCGCCCGC CCAGC-CACc (CC CACA CGGCACAAC GCCAGGCGr CC(,CGAC 1.20 CCAkTCCCA GACCCCCGC AC-CCCCACG CAGACACGGA CCAGCCGCCG; CGGT~CAAT 180 GTTCACCCGC CGCGGTCAAG ATG-TATCTGC CACCGACCCT CGCCCCGCTG GACGOACOGCA 240 CGGACGCCG CACGCCGTA GCGTCCACC- GTCACTGCCG CCGCCCACAG TGATGTCCc 300 CACG-AAAGA CACACGTAGA AGCGGACGCC GTGGTCAAGA TGTCTCTGCC ATCCCCACAC. 360 GACGGACGGA COGACTCCAC
MOOGT

Claims (31)

1. An isolated protein with differentiation-inducing activity on Friend erythroleukemia cell lines comprising the following properties: induces differentiation in Friend erythroleukemia cell lines with hemoglobin formation; a molecular weight in the range of about 10 60 kDa as determined by gel filtration on Sephacryl S300®; is encoded by a cDNA comprising repeat structures of SEQ ID NOS. 6 and 7; with corresponding mRNA species of different length comprising identical 3' regions corresponding to the coding region of SEQ ID NO. 2 but different 5' regions; optionally with an expression of the corresponding mRNA in primary cells of the thymus, fetal liver, adult spleen, or bone marrow.
2. An isolated protein according to claim 1, wherein the cDNA encoding the protein has characteristic repeat :structures, the corresponding mRNA species being of different "length and consisting of identical 3' regions but different regions.
3. An isolated protein according to claim 1 or claim 2, characterized in that said protein has at least one of the following features: showing a stable in vitro expression of the corresponding mRNA if an allogenic spleen cell reaction is carried out with non-irradiated, not pretreated spleen cells or mouse strains CBA and C57B1/6; having AT rich regions in the cDNA encoding the protein; inducible by a serum factor present in fetal calf serum. An isolated protein according to claim 1, characterized c that one or more of the repeat sequences presented in Table PIT ,j 3 or of repeat sequences hybridizing to these repeat sequences under stringent conditions are present in the DNA encoding the protein of any one of claims 1 to 3. An isolated protein according to one or more of the preceding claims, characterized in that said protein may be isolated from human cells, murine cells, or the culture supernatants of human or murine cell lines.
6. An isolated protein according to claim 5, wherein the protein is isolated from irradiated human bone marrow stromal cell lines.
7. An isolated protein according to one or more of the preceding claims, characterized in that said protein exhibits a partial amino acid sequence encoded by a DNA hybridizing to the cDNA of SEQ ID NO:1 or NO:2 or NO:4.
8. An isolated protein according to one or more of the preceding claims, characterized in that said protein exhibits a partial amino acid sequence encoded by a DNA hybridizing to *i the cDNA of SEQ ID NO:1 or NO:2 or NO:4 under stringent conditions.
9. An isolated protein according to one or more of the :preceding claims, characterized in that there are also comprised portions, analogues, and derivatives of said protein as well as fusion proteins each coding for a protein having at least differentiation-inducing activity on Friend erythroluelkemia cell lines. C C.
10. An isolated protein according to one or more of the preceding claims having an essentially purified, native form.
11. An isolated protein according to one or more of the preceding claims having an essentially recombinant form.
12. An isolated protein according to one or more of the preceding claims said protein having growth factor activity and/or colony-stimulating activity.
13. An isolated protein according to one or more of the preceding claims, characterized in that said protein exhibits a differentiation-inducing effect on human leukemia cell lines.
14. An isolated protein according to one or more of the preceding claims, characterized in that said protein contains partial amino acid sequences according to SEQ ID NO:3 or wherein one or more of the amino acids may be deleted, substituted, or added. DNA fragment according to SEQ ID NO:1 or NO:2 or NO:4 or the complementary strand thereof, portions, derivatives, and analogues thereof each coding for a polypeptide having at least differentiation-inducing activity on Friend erythroleukemia cell lines.
16. DNA fragments, portions, analogues, and derivatives thereof each coding for a polypeptide having at least differentiation-inducing activity on Friend erythroleukemia cell lines hybridizing to the cDNA according to SEQ ID NO:1 or NO:2 or NO:4 and/or which are degenerated by the genetic code.
17. DNA fragments, portions, analogues, and derivative thereof each coding to a polypeptide having at least differentiation-inducing activity on Friend erythroleukemia cell lines hybridizing to the cDNA according to SEQ ID NO:1 or NO:2 or NO:4 under stringent conditions and/or which are degenerated by the genetic code.
18. DNA fragment of one or more of the preceding claims 15 to 17, characterized in that said DNA fragment encodes at least a r7 art of a polypeptide with the activity of the human or murine -57 -otein having at least differentiation-inducing activity on Friend erythroleukemia cell lines according to one or more of the preceding claims.
19. Recombinant vector, characterized in that said vector contains a DNA sequence corresponding to a gene or a DNA fragment encoding the protein with at least differentiation- inducing activity on Friend erythroleukemia cell lines according to one or more of the preceding claims 1 to 14. Recombinant vector according to claim 19, characterized in that said vector is derived from a bacterial plasmid, a bacteriophage, or a viral vector.
21. Host cell transformed by a vector according to one or more of the preceding claims 19 and
22. Host cell according to claim 21, characterized in that said host cell is a prokaryotic cell or an eukaryotic cell.
23. Method for the preparation of a DNA fragment according to one or more of the preceding claims, characterized in that said method comprises screening of a human or murine cDNA clone library using as a probe a DNA fragment of a DNA coding for a murine or human protein having at least differentiation- inducing activity on Friend erythroleukemia cell lines.
24. Monoclonal or polyclonal antibody directed against at least one epitope of a protein having at least differentiation-inducing activity on Friend erythroleukemia cell lines according to one or more of the preceding claims 1 to 14. Therapeutic, diagnostic or experimentally useful means, characterized in that said means contains as an effective substance at least one nucleic acid in an effective amount which hybridizes to a gene or a part thereof encoding the T rotein having at least differentiation-inducing activity on Friend erythroleukemia cell lines according to one or more of the preceding claims.
26. Means according to claim 25, characterized in that said means contains as an effective substance at least one nucleic acid comprising the nucleotide sequence encoding a protein with at least differentiation-inducing activity on Friend erythroleukemia cell lines, a portion thereof, a nucleotide sequence hybridizing to a nucleic acid as under (a) and/or under stringent conditions, or a nucleotide sequence complementary to a nucleotide sequence as under and/or
27. Means according to one or more of the preceding claims and 26, characterized in that said nucleic acid optionally is a modified DNA.
28. Means according to one or more of the preceding claims and 26, characterized in that said nucleic acid optionally is a modified RNA.
29. Therapeutic means, characterized in that said means contains a protein, an analogue, a derivative or portions thereof according to one or more of the preceding claims 1 to 14 each functioning as a polypeptide with at least .differentiation-inducing activity on Friend erythroleukemia cell lines together with conventional carriers and excipients in an effective amount. S 30. Use of a means according to one or more of the preceding claims 25 to 29 as a molecular probe in diagnostics or therapy.
31. Use of a means according one or more of the preceding claims 25 to 29 as an antisense nucleic acid for the inhibition of gene expression.
32. Use of a DNA encoding a protein having at least differentiation-inducing activity on Friend erythroleukemia cell lines, a portion, derivative, or analogue thereof each functioning as a polypeptide with at least differentiation-inducing activity on Friend erythroleukemia cell lines for the incorporation into a prokaryotic or eukaryotic cell.
33. Fusion protein having an amino acid sequence consisting completely or in part of the amino acid sequence of the human or murine protein with at least differentiation-inducing activity on Friend erythroleukemia cell lines according to one or more of the preceding claims 1 to 14 and in part of a prokaryotic and/or eukaryotic protein.
34. A protein according to claim 8, wherein the protein is a synthetic protein. Use of a protein according to one or more of the preceding claims 1 to 14 or of inhibitors of said protein in the treatment of diseases in which a local or systemic overproduction or underproduction of this protein affects the development of the disease or the course thereof.
36. Use of a protein according to one or more of the preceding claims 1 to 14 as a 0: growth factor, colony-stimulating factor, a factor inducing erythropoiesis and/or inducing the immune system.
37. Protein according to one or more of the preceding claims 1 to 14 characterized in that said protein comprises at least those amino acids which are encoded by nucleotides 74 154 or 155 685 of the DNA of SEQ ID NO:2. DATED THIS TWENTY-NINTH DAY OF AUGUST
2000. S: GSF-FORSCHUNGSZENTRUM FUR UMWELT UND GESUNDHEIT GMBH BY PIZZEYS PATENT TRADE MARK ATTORNEYS
AU28748/97A 1996-03-28 1997-03-27 Novel protein having at least differentiation-inducing activity on Friend erythroleukemia cell lines Ceased AU726786B2 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
DE19612463A DE19612463C2 (en) 1996-03-28 1996-03-28 New protein with differentiation-inducing activity for erythropoietic cells
DE19612463 1996-03-28
PCT/EP1997/001590 WO1997037015A1 (en) 1996-03-28 1997-03-27 Protein with differentiation-inducing activity for friend's erythroleukemia cell lines

Publications (2)

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AU2874897A AU2874897A (en) 1997-10-22
AU726786B2 true AU726786B2 (en) 2000-11-23

Family

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Country Status (7)

Country Link
EP (1) EP0833909A1 (en)
JP (1) JPH11507247A (en)
KR (1) KR19990022011A (en)
AU (1) AU726786B2 (en)
CA (1) CA2222596A1 (en)
DE (1) DE19612463C2 (en)
WO (1) WO1997037015A1 (en)

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KR101627020B1 (en) 2013-12-02 2016-06-02 충북대학교 산학협력단 Antibody that recognizes the ICAM4 on erythroleukemia and use of the antibody

Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1989004668A1 (en) * 1987-11-13 1989-06-01 The Salk Institute For Biological Studies Potentiation of erythropoiesis
WO1995014078A1 (en) * 1993-11-16 1995-05-26 Cameron Robert B Bioengineered human blood cells

Patent Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1989004668A1 (en) * 1987-11-13 1989-06-01 The Salk Institute For Biological Studies Potentiation of erythropoiesis
WO1995014078A1 (en) * 1993-11-16 1995-05-26 Cameron Robert B Bioengineered human blood cells

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
BIOTECHNOLOGY & BIOENGINEERING VOL 31 PP 675-81 (1988) *

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CA2222596A1 (en) 1997-10-09
WO1997037015A1 (en) 1997-10-09
DE19612463A1 (en) 1997-10-02
EP0833909A1 (en) 1998-04-08
KR19990022011A (en) 1999-03-25
DE19612463C2 (en) 1998-04-30
JPH11507247A (en) 1999-06-29
AU2874897A (en) 1997-10-22

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