AU6461001A - Single copy genomic hybridization probes and method of generating same - Google Patents

Single copy genomic hybridization probes and method of generating same

Info

Publication number
AU6461001A
AU6461001A AU6461001A AU6461001A AU6461001A AU 6461001 A AU6461001 A AU 6461001A AU 6461001 A AU6461001 A AU 6461001A AU 6461001 A AU6461001 A AU 6461001A AU 6461001 A AU6461001 A AU 6461001A
Authority
AU
Australia
Prior art keywords
hybridization probes
single copy
genomic hybridization
generating same
copy genomic
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Pending
Application number
AU6461001A
Other languages
English (en)
Inventor
Joan H M Knoll
Peter K Rogan
Patricia M Cazarro
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Children's Mercy Hospital
Original Assignee
Children's Mercy Hospital
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from US09/573,080 external-priority patent/US6828097B1/en
Application filed by Children's Mercy Hospital filed Critical Children's Mercy Hospital
Publication of AU6461001A publication Critical patent/AU6461001A/xx
Pending legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6841—In situ hybridisation
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/156—Polymorphic or mutational markers

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Analytical Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Immunology (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Materials By The Use Of Chemical Reactions (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
AU6461001A 2000-05-16 2001-05-15 Single copy genomic hybridization probes and method of generating same Pending AU6461001A (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US09/573,080 US6828097B1 (en) 2000-05-16 2000-05-16 Single copy genomic hybridization probes and method of generating same
US09/854,867 US7014997B2 (en) 2000-05-16 2001-05-14 Chromosome structural abnormality localization with single copy probes
PCT/US2001/015674 WO2001088089A2 (en) 2000-05-16 2001-05-15 Single copy genomic hybridization probes and method of generating same

Publications (1)

Publication Number Publication Date
AU6461001A true AU6461001A (en) 2001-11-26

Family

ID=27076021

Family Applications (2)

Application Number Title Priority Date Filing Date
AU6461001A Pending AU6461001A (en) 2000-05-16 2001-05-15 Single copy genomic hybridization probes and method of generating same
AU2001264610A Ceased AU2001264610B2 (en) 2000-05-16 2001-05-15 Single copy genomic hybridization probes and method of generating same

Family Applications After (1)

Application Number Title Priority Date Filing Date
AU2001264610A Ceased AU2001264610B2 (en) 2000-05-16 2001-05-15 Single copy genomic hybridization probes and method of generating same

Country Status (8)

Country Link
US (2) US20080085509A1 (enExample)
EP (1) EP1285093A4 (enExample)
JP (1) JP2004523201A (enExample)
AU (2) AU6461001A (enExample)
CA (1) CA2409752A1 (enExample)
IL (1) IL152727A0 (enExample)
NZ (2) NZ539223A (enExample)
WO (1) WO2001088089A2 (enExample)

Families Citing this family (26)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6828097B1 (en) 2000-05-16 2004-12-07 The Childrens Mercy Hospital Single copy genomic hybridization probes and method of generating same
US7081339B2 (en) * 2002-04-12 2006-07-25 Primera Biosystems, Inc. Methods for variation detection
KR20050073466A (ko) * 2002-09-30 2005-07-13 칠드런스 머시 호스피탈 서브텔로미어 디엔에이 프로브 및 이의 제조 방법
GB0326197D0 (en) * 2003-11-10 2003-12-17 Randox Lab Ltd Molecular marker
CA2566395A1 (en) * 2004-03-26 2005-10-13 The Children's Mercy Hospital Computational selection of probes for localizing chromosome breakpoints
US20060223075A1 (en) * 2005-03-29 2006-10-05 Exagen Diagnostics, Inc. Unique sequence hybridization probes (USP)
US8407013B2 (en) 2005-06-07 2013-03-26 Peter K. Rogan AB initio generation of single copy genomic probes
US7734424B1 (en) 2005-06-07 2010-06-08 Rogan Peter K Ab initio generation of single copy genomic probes
AU2006327111A1 (en) * 2005-11-18 2007-06-28 The Children's Mercy Hospital Mitigation of Cot-1 DNA distortion in nucleic acid hybridization
ES2372427T3 (es) 2006-09-01 2012-01-19 Ventana Medical Systems, Inc. Método para producir sondas de ácido nucleico.
EP3276349B1 (en) 2006-11-01 2019-08-07 Ventana Medical Systems, Inc. Haptens, hapten conjugates, compositions thereof and method for their preparation and use
WO2008119084A1 (en) * 2007-03-28 2008-10-02 The Children's Mercy Hospital Method for identifying and selecting low copy nucleic acid segments
US7682789B2 (en) 2007-05-04 2010-03-23 Ventana Medical Systems, Inc. Method for quantifying biomolecules conjugated to a nanoparticle
US7985557B2 (en) 2007-05-23 2011-07-26 Ventana Medical Systems, Inc. Polymeric carriers for immunohistochemistry and in situ hybridization
CA2979353C (en) 2008-06-05 2020-06-30 Ventana Medical Systems, Inc. Compositions comprising nanomaterials and method for using such compositions for histochemical processes
CN103003443B (zh) 2009-11-23 2016-09-21 拜尔作物科学股份有限公司 耐除草剂大豆植物及鉴定其的方法
CA2781557C (en) 2009-11-23 2018-01-09 Bayer Cropscience N.V. Elite event ee-gm3 and methods and kits for identifying such event in biological samples
JP5838169B2 (ja) * 2009-12-31 2016-01-06 ヴェンタナ メディカル システムズ， インク． 一意的に特異的核酸プローブを生成するための方法
WO2016077426A1 (en) * 2014-11-11 2016-05-19 Abbott Molecular Inc. Hybridization probes and methods
CN114350752B (zh) 2015-07-17 2025-02-25 布鲁克空间生物学公司 在横切面组织的用户定义区域中的基因表达的同时定量
WO2017214417A1 (en) * 2016-06-10 2017-12-14 Takara Bio Usa, Inc. Methods and compositions employing blocked primers
US20230183780A1 (en) 2016-07-25 2023-06-15 InVivo BioTech Services GmbH Dna probes for in situ hybridization on chromosomes
AU2017361521B2 (en) 2016-11-21 2020-08-27 Bruker Spatial Biology, Inc. Chemical compositions and methods of using same
KR102893736B1 (ko) 2018-05-14 2025-11-28 브루커 스페이셜 바이올로지, 인크. 화학 조성물 및 이의 사용 방법
EP3940075A1 (en) * 2020-07-17 2022-01-19 Istituto Nazionale Di Genetica Molecolare-INGM Inhibitors of line1 and uses thereof
CN113483931B (zh) * 2021-07-02 2023-01-24 中国国家铁路集团有限公司 弓网接触力区段异常识别方法及装置

Family Cites Families (13)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5110920A (en) 1982-01-22 1992-05-05 Cetus Corporation HLA typing method and DNA probes used therein
US5985549A (en) 1985-10-22 1999-11-16 University Of Massachusetts Non-isotopic in-situ hybridization method for detection of nucleic acids
US5721098A (en) * 1986-01-16 1998-02-24 The Regents Of The University Of California Comparative genomic hybridization
US5756696A (en) * 1986-01-16 1998-05-26 Regents Of The University Of California Compositions for chromosome-specific staining
US5447841A (en) 1986-01-16 1995-09-05 The Regents Of The Univ. Of California Methods for chromosome-specific staining
US5273881A (en) 1990-05-07 1993-12-28 Daikin Industries, Ltd. Diagnostic applications of double D-loop formation
US6040140A (en) * 1991-12-11 2000-03-21 Thomas Jefferson University Methods for screening and treating leukemias resulting from all-1 region chromosome abnormalities
US6121419A (en) * 1992-06-17 2000-09-19 Arch Development Corp. Compositions and methods for detecting gene rearrangements and translocations
WO1994017208A1 (en) * 1993-01-21 1994-08-04 President And Fellows Of Harvard College Methods and diagnostic kits utilizing mammalian stress promoters to determine toxicity of a compound
US6150160A (en) * 1995-11-16 2000-11-21 The John Hopkins University Compositions and methods of use of mammalian retrotransposons
US6222029B1 (en) * 1997-08-01 2001-04-24 Genset 5′ ESTs for secreted proteins expressed in brain
US6828097B1 (en) * 2000-05-16 2004-12-07 The Childrens Mercy Hospital Single copy genomic hybridization probes and method of generating same
WO2002093130A2 (en) * 2001-05-14 2002-11-21 Cancer Genetics, Inc. Methods of analyzing chromosomal translocations using fluorescence in situ hybridization (fish)

Also Published As

Publication number Publication date
AU2001264610B2 (en) 2007-01-04
WO2001088089A3 (en) 2002-07-04
EP1285093A2 (en) 2003-02-26
JP2004523201A (ja) 2004-08-05
NZ522406A (en) 2006-05-26
US20090312533A1 (en) 2009-12-17
US20080085509A1 (en) 2008-04-10
EP1285093A4 (en) 2005-10-12
CA2409752A1 (en) 2001-11-22
WO2001088089A8 (en) 2005-04-07
WO2001088089A2 (en) 2001-11-22
NZ539223A (en) 2006-10-27
IL152727A0 (en) 2003-06-24

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