AU2016357723A1 - Systems and methods for identifying and distinguishing genetic samples - Google Patents

Systems and methods for identifying and distinguishing genetic samples Download PDF

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Publication number
AU2016357723A1
AU2016357723A1 AU2016357723A AU2016357723A AU2016357723A1 AU 2016357723 A1 AU2016357723 A1 AU 2016357723A1 AU 2016357723 A AU2016357723 A AU 2016357723A AU 2016357723 A AU2016357723 A AU 2016357723A AU 2016357723 A1 AU2016357723 A1 AU 2016357723A1
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AU
Australia
Prior art keywords
probes
subject
nucleic acid
biochip
feature
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
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AU2016357723A
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English (en)
Inventor
Robert Charles Kain
Richard Shen
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Revere Biosensors Inc
Original Assignee
Revere Biosensors Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Revere Biosensors Inc filed Critical Revere Biosensors Inc
Publication of AU2016357723A1 publication Critical patent/AU2016357723A1/en
Priority to AU2022275409A priority Critical patent/AU2022275409B2/en
Abandoned legal-status Critical Current

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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6834—Enzymatic or biochemical coupling of nucleic acids to a solid phase
    • C12Q1/6837—Enzymatic or biochemical coupling of nucleic acids to a solid phase using probe arrays or probe chips
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2525/00—Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
    • C12Q2525/10—Modifications characterised by
    • C12Q2525/117—Modifications characterised by incorporating modified base
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2525/00—Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
    • C12Q2525/10—Modifications characterised by
    • C12Q2525/161—Modifications characterised by incorporating target specific and non-target specific sites
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2525/00—Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
    • C12Q2525/10—Modifications characterised by
    • C12Q2525/185—Modifications characterised by incorporating bases where the precise position of the bases in the nucleic acid string is important
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2527/00—Reactions demanding special reaction conditions
    • C12Q2527/107—Temperature of melting, i.e. Tm
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2537/00—Reactions characterised by the reaction format or use of a specific feature
    • C12Q2537/10—Reactions characterised by the reaction format or use of a specific feature the purpose or use of
    • C12Q2537/143—Multiplexing, i.e. use of multiple primers or probes in a single reaction, usually for simultaneously analyse of multiple analysis
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2563/00—Nucleic acid detection characterized by the use of physical, structural and functional properties
    • C12Q2563/107—Nucleic acid detection characterized by the use of physical, structural and functional properties fluorescence
    • Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
    • Y02A90/00—Technologies having an indirect contribution to adaptation to climate change
    • Y02A90/10—Information and communication technologies [ICT] supporting adaptation to climate change, e.g. for weather forecasting or climate simulation

Landscapes

  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • Physics & Mathematics (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Immunology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
AU2016357723A 2015-11-16 2016-11-15 Systems and methods for identifying and distinguishing genetic samples Abandoned AU2016357723A1 (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
AU2022275409A AU2022275409B2 (en) 2015-11-16 2022-11-22 Systems and methods for identifying and distinguishing genetic samples

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US201562256049P 2015-11-16 2015-11-16
US62/256,049 2015-11-16
US201662306597P 2016-03-10 2016-03-10
US62/306,597 2016-03-10
PCT/US2016/062090 WO2017087416A1 (en) 2015-11-16 2016-11-15 Systems and methods for identifying and distinguishing genetic samples

Related Child Applications (1)

Application Number Title Priority Date Filing Date
AU2022275409A Division AU2022275409B2 (en) 2015-11-16 2022-11-22 Systems and methods for identifying and distinguishing genetic samples

Publications (1)

Publication Number Publication Date
AU2016357723A1 true AU2016357723A1 (en) 2018-06-14

Family

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Family Applications (2)

Application Number Title Priority Date Filing Date
AU2016357723A Abandoned AU2016357723A1 (en) 2015-11-16 2016-11-15 Systems and methods for identifying and distinguishing genetic samples
AU2022275409A Active AU2022275409B2 (en) 2015-11-16 2022-11-22 Systems and methods for identifying and distinguishing genetic samples

Family Applications After (1)

Application Number Title Priority Date Filing Date
AU2022275409A Active AU2022275409B2 (en) 2015-11-16 2022-11-22 Systems and methods for identifying and distinguishing genetic samples

Country Status (8)

Country Link
US (2) US11725233B2 (cg-RX-API-DMAC7.html)
EP (1) EP3377654B1 (cg-RX-API-DMAC7.html)
JP (2) JP7315326B2 (cg-RX-API-DMAC7.html)
CN (2) CN115287335A (cg-RX-API-DMAC7.html)
AU (2) AU2016357723A1 (cg-RX-API-DMAC7.html)
CA (1) CA3005430A1 (cg-RX-API-DMAC7.html)
DK (1) DK3377654T3 (cg-RX-API-DMAC7.html)
WO (1) WO2017087416A1 (cg-RX-API-DMAC7.html)

Families Citing this family (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN115287335A (zh) 2015-11-16 2022-11-04 雷瑞生物传感器有限责任公司 鉴别并区分遗传样品的系统及方法
CA3063106A1 (en) 2017-05-09 2018-11-15 Revere Biosensors, Llc Systems and methods for identifying and distinguishing genetic samples
CN108588284B (zh) * 2018-05-10 2022-06-10 山东师范大学 基于酶催化可控自组装生物条码检测htlv-ii dna的方法
CN109735598B (zh) * 2019-02-13 2021-03-09 中国人民解放军总医院 琥珀酸弧菌属在鉴别和/或区分不同民族个体中的应用
EP3931353A4 (en) * 2019-03-01 2022-11-16 Revere Biosensors, LLC Systems and methods for separating decoded arrays

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Also Published As

Publication number Publication date
JP7434243B2 (ja) 2024-02-20
EP3377654A1 (en) 2018-09-26
CN115287335A (zh) 2022-11-04
AU2022275409B2 (en) 2025-10-02
US20200087717A1 (en) 2020-03-19
US11725233B2 (en) 2023-08-15
DK3377654T3 (da) 2024-02-19
JP7315326B2 (ja) 2023-07-26
US20240218431A1 (en) 2024-07-04
WO2017087416A1 (en) 2017-05-26
JP2022023083A (ja) 2022-02-07
EP3377654B1 (en) 2024-01-31
AU2022275409A1 (en) 2023-01-05
EP3377654A4 (en) 2019-07-10
CA3005430A1 (en) 2017-05-26
CN108474028A (zh) 2018-08-31
JP2018533965A (ja) 2018-11-22

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