AU2002304705A1 - Method for analysing nucleic acid chains - Google Patents

Method for analysing nucleic acid chains

Info

Publication number
AU2002304705A1
AU2002304705A1 AU2002304705A AU2002304705A AU2002304705A1 AU 2002304705 A1 AU2002304705 A1 AU 2002304705A1 AU 2002304705 A AU2002304705 A AU 2002304705A AU 2002304705 A AU2002304705 A AU 2002304705A AU 2002304705 A1 AU2002304705 A1 AU 2002304705A1
Authority
AU
Australia
Prior art keywords
nucleic acid
acid chains
analysing nucleic
analysing
chains
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
AU2002304705A
Inventor
Dmitri Tcherkassov
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Genovoxx GmbH
Original Assignee
Genovoxx GmbH
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Genovoxx GmbH filed Critical Genovoxx GmbH
Publication of AU2002304705A1 publication Critical patent/AU2002304705A1/en
Abandoned legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • C12Q1/6874—Methods for sequencing involving nucleic acid arrays, e.g. sequencing by hybridisation
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/156—Polymorphic or mutational markers
AU2002304705A 2001-04-27 2002-04-26 Method for analysing nucleic acid chains Abandoned AU2002304705A1 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
DE10120797.2 2001-04-27
DE10120797A DE10120797B4 (en) 2001-04-27 2001-04-27 Method for analyzing nucleic acid chains
PCT/EP2002/004659 WO2002088382A2 (en) 2001-04-27 2002-04-26 Method for analysing nucleic acid chains

Publications (1)

Publication Number Publication Date
AU2002304705A1 true AU2002304705A1 (en) 2002-11-11

Family

ID=7683014

Family Applications (1)

Application Number Title Priority Date Filing Date
AU2002304705A Abandoned AU2002304705A1 (en) 2001-04-27 2002-04-26 Method for analysing nucleic acid chains

Country Status (5)

Country Link
EP (1) EP1381698A2 (en)
JP (1) JP2004529650A (en)
AU (1) AU2002304705A1 (en)
DE (1) DE10120797B4 (en)
WO (1) WO2002088382A2 (en)

Families Citing this family (58)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7875440B2 (en) 1998-05-01 2011-01-25 Arizona Board Of Regents Method of determining the nucleotide sequence of oligonucleotides and DNA molecules
US6780591B2 (en) 1998-05-01 2004-08-24 Arizona Board Of Regents Method of determining the nucleotide sequence of oligonucleotides and DNA molecules
US9708358B2 (en) 2000-10-06 2017-07-18 The Trustees Of Columbia University In The City Of New York Massive parallel method for decoding DNA and RNA
ATE356222T1 (en) 2000-10-06 2007-03-15 Univ Columbia MASSIVE PARALLEL METHOD FOR DECODING DNA AND RNA
WO2003020968A2 (en) * 2001-08-29 2003-03-13 Genovoxx Gmbh Method for analyzing nucleic acid sequences and gene expression
WO2003031947A2 (en) * 2001-10-04 2003-04-17 Genovoxx Gmbh Device for sequencing nucleic acid molecules
DE10149786B4 (en) * 2001-10-09 2013-04-25 Dmitry Cherkasov Surface for studies of populations of single molecules
GB0129012D0 (en) 2001-12-04 2002-01-23 Solexa Ltd Labelled nucleotides
DE10214395A1 (en) * 2002-03-30 2003-10-23 Dmitri Tcherkassov Parallel sequencing of nucleic acid segments, useful for detecting single-nucleotide polymorphisms, by single-base extensions with labeled nucleotide
US7414116B2 (en) 2002-08-23 2008-08-19 Illumina Cambridge Limited Labelled nucleotides
SI3147292T1 (en) 2002-08-23 2019-01-31 Illumina Cambridge Limited Labelled nucleotides
EP3002289B1 (en) 2002-08-23 2018-02-28 Illumina Cambridge Limited Modified nucleotides for polynucleotide sequencing
US11008359B2 (en) 2002-08-23 2021-05-18 Illumina Cambridge Limited Labelled nucleotides
EP1725572B1 (en) 2003-11-05 2017-05-31 AGCT GmbH Macromolecular nucleotide compounds and methods for using the same
US7169560B2 (en) 2003-11-12 2007-01-30 Helicos Biosciences Corporation Short cycle methods for sequencing polynucleotides
WO2005080605A2 (en) 2004-02-19 2005-09-01 Helicos Biosciences Corporation Methods and kits for analyzing polynucleotide sequences
US7666593B2 (en) 2005-08-26 2010-02-23 Helicos Biosciences Corporation Single molecule sequencing of captured nucleic acids
JP5220596B2 (en) * 2006-05-24 2013-06-26 独立行政法人産業技術総合研究所 Nucleic acid synthesis method and single molecule sequencing method using DNA polymerase β
WO2007147076A2 (en) 2006-06-14 2007-12-21 Living Microsystems, Inc. Methods for the diagnosis of fetal abnormalities
WO2008042067A2 (en) 2006-09-28 2008-04-10 Illumina, Inc. Compositions and methods for nucleotide sequencing
WO2008069973A2 (en) 2006-12-01 2008-06-12 The Trustees Of Columbia University In The City Of New York Four-color dna sequencing by synthesis using cleavable fluorescent nucleotide reversible terminators
WO2009054922A1 (en) 2007-10-19 2009-04-30 The Trustees Of Columbia University In The City Of New York Dna sequencing with non-fluorescent nucleotide reversible terminators and cleavable label modified nucleotide terminators
EP4310194A2 (en) 2007-10-19 2024-01-24 The Trustees of Columbia University in the City of New York Design and synthesis of cleavable fluorescent nucleotides as reversible terminators for dna sequencing by synthesis
JP4621926B2 (en) 2008-07-24 2011-02-02 国立大学法人九州大学 Enzyme substrate-modified nucleoside triphosphate, nucleic acid probe, multilabeled nucleic acid probe, method for producing multilabeled nucleic acid probe, and method for detecting target nucleic acid
JP5146785B2 (en) * 2008-07-24 2013-02-20 国立大学法人九州大学 Enzyme substrate modified nucleoside triphosphate derivatives
US10174368B2 (en) 2009-09-10 2019-01-08 Centrillion Technology Holdings Corporation Methods and systems for sequencing long nucleic acids
WO2011032040A1 (en) 2009-09-10 2011-03-17 Centrillion Technology Holding Corporation Methods of targeted sequencing
US9315860B2 (en) 2009-10-26 2016-04-19 Genovoxx Gmbh Conjugates of nucleotides and method for the application thereof
DK2496720T3 (en) 2009-11-06 2020-09-28 Univ Leland Stanford Junior NON-INVASIVE DIAGNOSIS OF TRANSPLANT REJECTION IN ORGAN-TRANSPLANTED PATIENTS
JP5704481B2 (en) * 2010-01-22 2015-04-22 国立大学法人九州大学 Nucleic acid detection kit
KR102042253B1 (en) 2010-05-25 2019-11-07 더 리젠츠 오브 더 유니버시티 오브 캘리포니아 Bambam: parallel comparative analysis of high-throughput sequencing data
US9646134B2 (en) 2010-05-25 2017-05-09 The Regents Of The University Of California Bambam: parallel comparative analysis of high-throughput sequencing data
US10144950B2 (en) 2011-01-31 2018-12-04 Roche Sequencing Solutions, Inc. Methods of identifying multiple epitopes in cells
US20120252682A1 (en) 2011-04-01 2012-10-04 Maples Corporate Services Limited Methods and systems for sequencing nucleic acids
DE102012008375A1 (en) 2011-04-27 2012-10-31 Genovoxx Gmbh Methods and components for the detection of nucleic acid chains
US20150086981A1 (en) 2011-05-04 2015-03-26 Genovoxx Gmbh Nucleoside-triphosphate conjugate and methods for the use thereof
EP2776962A4 (en) 2011-11-07 2015-12-02 Ingenuity Systems Inc Methods and systems for identification of causal genomic variants
WO2014026032A2 (en) 2012-08-08 2014-02-13 Apprise Bio, Inc. Increasing dynamic range for identifying multiple epitopes in cells
US9411930B2 (en) 2013-02-01 2016-08-09 The Regents Of The University Of California Methods for genome assembly and haplotype phasing
CN108624668B (en) 2013-02-01 2022-12-02 加利福尼亚大学董事会 Methods for genome assembly and haplotype phasing
CN108864232B (en) 2013-03-15 2022-01-04 伊鲁米纳剑桥有限公司 Modified nucleosides or nucleotides
US10648026B2 (en) 2013-03-15 2020-05-12 The Trustees Of Columbia University In The City Of New York Raman cluster tagged molecules for biological imaging
CN114107458A (en) 2013-03-15 2022-03-01 血统生物科学公司 Method for sequencing an immune repertoire
CN103484106B (en) * 2013-09-05 2015-08-19 上海交通大学 Four look fluorescent mark Reversible terminal and the purposes in DNA sequencing thereof
CN105829589B (en) 2013-11-07 2021-02-02 小利兰·斯坦福大学理事会 Cell-free nucleic acids for analysis of human microbiome and components thereof
CA2933387C (en) 2013-12-11 2023-05-02 The Regents Of The University Of California Methods for labeling dna fragments to reconstruct physical linkage and phase
AU2015296029B2 (en) 2014-08-01 2022-01-27 Dovetail Genomics, Llc Tagging nucleic acids for sequence assembly
GB201414098D0 (en) 2014-08-08 2014-09-24 Illumina Cambridge Ltd Modified nucleotide linkers
SG11201706730XA (en) 2015-02-17 2017-09-28 Dovetail Genomics Llc Nucleic acid sequence assembly
GB2554572B (en) 2015-03-26 2021-06-23 Dovetail Genomics Llc Physical linkage preservation in DNA storage
AU2016341198B2 (en) 2015-10-19 2023-03-09 Dovetail Genomics, Llc Methods for genome assembly, haplotype phasing, and target independent nucleic acid detection
KR20180116377A (en) 2016-02-23 2018-10-24 더브테일 제노믹스 엘엘씨 Generation and Hexagonal Paging of a Paged Read Set for Genome Assemblies
IL262946B2 (en) 2016-05-13 2023-03-01 Dovetail Genomics Llc Recovering long-range linkage information from preserved samples
AU2018256358A1 (en) 2017-04-18 2019-11-07 Dovetail Genomics, Llc Nucleic acid characteristics as guides for sequence assembly
CA3068273A1 (en) 2017-06-21 2018-12-27 Bluedot Llc Systems and methods for identification of nucleic acids in a sample
WO2019060716A1 (en) 2017-09-25 2019-03-28 Freenome Holdings, Inc. Methods and systems for sample extraction
CA3090102A1 (en) 2018-01-31 2019-08-08 Dovetail Genomics, Llc Sample prep for dna linkage recovery
US11166996B2 (en) 2018-12-12 2021-11-09 Flagship Pioneering Innovations V, Inc. Anellovirus compositions and methods of use

Family Cites Families (10)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
GB9208733D0 (en) * 1992-04-22 1992-06-10 Medical Res Council Dna sequencing method
US5986076A (en) * 1994-05-11 1999-11-16 Trustees Of Boston University Photocleavable agents and conjugates for the detection and isolation of biomolecules
US6136543A (en) * 1997-01-31 2000-10-24 Hitachi, Ltd. Method for determining nucleic acids base sequence and apparatus therefor
CA2325399A1 (en) * 1998-03-23 1999-09-30 Invitrogen Corporation Modified nucleotides and methods useful for nucleic acid sequencing
DE19844931C1 (en) * 1998-09-30 2000-06-15 Stefan Seeger Procedures for DNA or RNA sequencing
ATE469699T1 (en) * 1999-02-23 2010-06-15 Caliper Life Sciences Inc MANIPULATION OF MICROPARTICLES IN MICROFLUID SYSTEMS
JP2002537858A (en) * 1999-03-10 2002-11-12 エーエスエム サイエンティフィック， インコーポレイテッド Methods for direct sequencing of nucleic acids
US7056661B2 (en) * 1999-05-19 2006-06-06 Cornell Research Foundation, Inc. Method for sequencing nucleic acid molecules
US6309836B1 (en) * 1999-10-05 2001-10-30 Marek Kwiatkowski Compounds for protecting hydroxyls and methods for their use
GB0013276D0 (en) * 2000-06-01 2000-07-26 Amersham Pharm Biotech Uk Ltd Nucleotide analogues

Also Published As

Publication number Publication date
EP1381698A2 (en) 2004-01-21
JP2004529650A (en) 2004-09-30
WO2002088382A3 (en) 2003-08-28
DE10120797A1 (en) 2002-11-21
WO2002088382A2 (en) 2002-11-07
DE10120797B4 (en) 2005-12-22

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Legal Events

Date Code Title Description
MK6 Application lapsed section 142(2)(f)/reg. 8.3(3) - pct applic. not entering national phase