AU2002239679A1 - Rolling circle amplification detection of rna and dna - Google Patents

Rolling circle amplification detection of rna and dna

Info

Publication number
AU2002239679A1
AU2002239679A1 AU2002239679A AU3967902A AU2002239679A1 AU 2002239679 A1 AU2002239679 A1 AU 2002239679A1 AU 2002239679 A AU2002239679 A AU 2002239679A AU 3967902 A AU3967902 A AU 3967902A AU 2002239679 A1 AU2002239679 A1 AU 2002239679A1
Authority
AU
Australia
Prior art keywords
rna
dna
rolling circle
circle amplification
amplification detection
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
AU2002239679A
Inventor
Cristina M. Attix
Allen T. Christian
Melissa S. Pattee
James D. Tucker
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
University of California
Original Assignee
University of California
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by University of California filed Critical University of California
Publication of AU2002239679A1 publication Critical patent/AU2002239679A1/en
Abandoned legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6806—Preparing nucleic acids for analysis, e.g. for polymerase chain reaction [PCR] assay

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Biophysics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Biotechnology (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
AU2002239679A 2000-12-20 2001-12-18 Rolling circle amplification detection of rna and dna Abandoned AU2002239679A1 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US25721600P 2000-12-20 2000-12-20
US60/257,216 2000-12-20
PCT/US2001/049780 WO2002050310A2 (en) 2000-12-20 2001-12-18 Rolling circle amplification detection of rna and dna

Publications (1)

Publication Number Publication Date
AU2002239679A1 true AU2002239679A1 (en) 2002-07-01

Family

ID=22975349

Family Applications (1)

Application Number Title Priority Date Filing Date
AU2002239679A Abandoned AU2002239679A1 (en) 2000-12-20 2001-12-18 Rolling circle amplification detection of rna and dna

Country Status (3)

Country Link
US (1) US6783943B2 (en)
AU (1) AU2002239679A1 (en)
WO (1) WO2002050310A2 (en)

Families Citing this family (32)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7141371B2 (en) * 2002-09-06 2006-11-28 State Of Oregon Acting By And Through The State Board Of Higher Education On Behalf Of The University Of Oregon Methods for detecting and localizing DNA mutations by microarray
US7989166B2 (en) 2005-04-12 2011-08-02 In Situ Rcp A/S Circle probes and their use in the identification of biomolecules
US8080393B2 (en) 2005-04-12 2011-12-20 Olink Ab Methods for production of oligonucleotides
US7449297B2 (en) 2005-04-14 2008-11-11 Euclid Diagnostics Llc Methods of copying the methylation pattern of DNA during isothermal amplification and microarrays
DE602006019855D1 (en) * 2005-05-10 2011-03-10 Oregon State METHOD OF MAPPING POLYMORPHISMS AND POLYMORPHISM MICROARRAYS
CA2611671C (en) 2005-06-15 2013-10-08 Callida Genomics, Inc. Single molecule arrays for genetic and chemical analysis
US7960104B2 (en) 2005-10-07 2011-06-14 Callida Genomics, Inc. Self-assembled single molecule arrays and uses thereof
US20070168197A1 (en) * 2006-01-18 2007-07-19 Nokia Corporation Audio coding
SG170028A1 (en) * 2006-02-24 2011-04-29 Callida Genomics Inc High throughput genome sequencing on dna arrays
EP1994180A4 (en) 2006-02-24 2009-11-25 Callida Genomics Inc High throughput genome sequencing on dna arrays
GB0621361D0 (en) * 2006-10-26 2006-12-06 Fermentas Uab Use of DNA polymerases
US7910354B2 (en) 2006-10-27 2011-03-22 Complete Genomics, Inc. Efficient arrays of amplified polynucleotides
US20090111706A1 (en) 2006-11-09 2009-04-30 Complete Genomics, Inc. Selection of dna adaptor orientation by amplification
US20090105961A1 (en) * 2006-11-09 2009-04-23 Complete Genomics, Inc. Methods of nucleic acid identification in large-scale sequencing
US8415099B2 (en) 2007-11-05 2013-04-09 Complete Genomics, Inc. Efficient base determination in sequencing reactions
US20090263872A1 (en) * 2008-01-23 2009-10-22 Complete Genomics Inc. Methods and compositions for preventing bias in amplification and sequencing reactions
US8518640B2 (en) * 2007-10-29 2013-08-27 Complete Genomics, Inc. Nucleic acid sequencing and process
US7897344B2 (en) * 2007-11-06 2011-03-01 Complete Genomics, Inc. Methods and oligonucleotide designs for insertion of multiple adaptors into library constructs
US7901890B2 (en) * 2007-11-05 2011-03-08 Complete Genomics, Inc. Methods and oligonucleotide designs for insertion of multiple adaptors employing selective methylation
WO2009073629A2 (en) 2007-11-29 2009-06-11 Complete Genomics, Inc. Efficient shotgun sequencing methods
US8592150B2 (en) 2007-12-05 2013-11-26 Complete Genomics, Inc. Methods and compositions for long fragment read sequencing
WO2009097368A2 (en) 2008-01-28 2009-08-06 Complete Genomics, Inc. Methods and compositions for efficient base calling in sequencing reactions
US20090270273A1 (en) * 2008-04-21 2009-10-29 Complete Genomics, Inc. Array structures for nucleic acid detection
US9524369B2 (en) 2009-06-15 2016-12-20 Complete Genomics, Inc. Processing and analysis of complex nucleic acid sequence data
US8551708B2 (en) * 2011-02-15 2013-10-08 Leica Biosystems Newcastle Ltd. Methods for localized in situ detection of mRNA
EP2744916A4 (en) 2011-07-13 2015-06-17 Primeradx Inc Multimodal methods for simultaneous detection and quantification of multiple nucleic acids in a sample
US20130157259A1 (en) * 2011-12-15 2013-06-20 Samsung Electronics Co., Ltd. Method of amplifying dna from rna in sample and use thereof
US10208339B2 (en) * 2015-02-19 2019-02-19 Takara Bio Usa, Inc. Systems and methods for whole genome amplification
EP3551765A4 (en) 2016-12-09 2020-11-11 Ultivue, Inc. Improved methods for multiplex imaging using labeled nucleic acid imaging agents
US20190382838A1 (en) * 2018-06-01 2019-12-19 The Trustees Of The University Of Pennsylvania Methods For Single-Molecule Fluorescence Amplification Of RNA
CA3118296A1 (en) * 2018-10-31 2020-05-07 The Board Of Trustees Of The Leland Stanford Junior University Methods and kits for detecting cells using oligonucleotide conjugated antibodies
WO2024196764A2 (en) 2023-03-17 2024-09-26 Nanostring Technologies, Inc. Assay for recombinase accessible chromatin and related compositions and methods

Family Cites Families (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4889799A (en) * 1984-02-17 1989-12-26 Fred Hutchinson Cancer Research Center Reagent kit producing shortened target DNA segments usable in sequencing large DNA segments
CA2218875C (en) * 1991-07-23 2000-11-07 The Research Foundation Of State University Of New York Improvements in the in situ pcr
US5543297A (en) * 1992-12-22 1996-08-06 Merck Frosst Canada, Inc. Human cyclooxygenase-2 cDNA and assays for evaluating cyclooxygenase-2 activity
WO1997019193A2 (en) * 1995-11-21 1997-05-29 Yale University Unimolecular segment amplification and detection
US5854033A (en) * 1995-11-21 1998-12-29 Yale University Rolling circle replication reporter systems
AU3567099A (en) * 1998-04-16 1999-11-01 Packard Bioscience Company Analysis of polynucleotide sequence
US6255082B1 (en) * 1998-09-15 2001-07-03 Yale University Artificial long terminal repeat vectors

Also Published As

Publication number Publication date
WO2002050310A3 (en) 2004-03-04
WO2002050310A9 (en) 2002-11-28
US6783943B2 (en) 2004-08-31
US20020177142A1 (en) 2002-11-28
WO2002050310A2 (en) 2002-06-27

Similar Documents

Publication Publication Date Title
AU2002239679A1 (en) Rolling circle amplification detection of rna and dna
AU2001234760A1 (en) Rolling circle amplification assay for nucleic acid analysis
AU2001278783A1 (en) Method of amplifying nucleic acid
AU2002359436A1 (en) Dna amplification and sequencing using dna molecules generated by random fragmentation
AU7878301A (en) Method of amplifying nucleic acid
AU2001273453A1 (en) Nucleic acid hairpin probes and uses thereof
AU2002337696A8 (en) Detection of tumor rna in plasma and serum
IL156311A0 (en) Method and kit for isothermal amplification of nucleic acids
AU2013202A (en) Nucleic acid amplification methods
AU2003206095A1 (en) Methods and means for amplifying nucleic acid
AU2002357714A1 (en) Sensors and methods of detection for proteinase enzymes
AU2001241674A1 (en) Variant galactose oxidase, nucleic acid encoding same, and methods of using same
HK1092175A1 (en) Nucleic acid amplifier and method of nucleic acid amplification
AU6227700A (en) Even length proportional amplification of nucleic acids
AU2001269039A1 (en) Immobilized nucleic acids and uses thereof
AU2001292292A1 (en) Novel enzyme having beta-glucosidase activity and use thereof
AU4099001A (en) Nucleic acid detection method and system
GB0025913D0 (en) Materials and methods relating to nucleic acid amplification and profiling
HK1040769A1 (en) Method for detection and quantification of specific nucleic acid.
AU2001250858A1 (en) Methods of preparing amplified nucleic acid molecules
AU2002362055A1 (en) Detection of matrix metalloproteinase rna in plasma and serum
AU2001292913A1 (en) Race condition detection and expression
AU5452300A (en) Target amplification of nucleic acid with mutant rna polymerase
EP1341931A4 (en) Detection of dna damage
AU2002355571A1 (en) Nucleic acid sensor molecules and methods of using same