ATE416261T1 - Erstellung eines genomischen profils von regulationsfaktor-bindungsstellen - Google Patents

Erstellung eines genomischen profils von regulationsfaktor-bindungsstellen

Info

Publication number
ATE416261T1
ATE416261T1 AT04758363T AT04758363T ATE416261T1 AT E416261 T1 ATE416261 T1 AT E416261T1 AT 04758363 T AT04758363 T AT 04758363T AT 04758363 T AT04758363 T AT 04758363T AT E416261 T1 ATE416261 T1 AT E416261T1
Authority
AT
Austria
Prior art keywords
binding sites
factor binding
regulatory factor
creation
genomic profile
Prior art date
Application number
AT04758363T
Other languages
English (en)
Inventor
Jie Zhang
Hsiu-Ying Wei
Leslie Mcevoy
Original Assignee
Anesiva Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Anesiva Inc filed Critical Anesiva Inc
Application granted granted Critical
Publication of ATE416261T1 publication Critical patent/ATE416261T1/de

Links

Classifications

    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/30Detection of binding sites or motifs
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00ICT programming tools or database systems specially adapted for bioinformatics
    • G16B50/20Heterogeneous data integration
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00ICT programming tools or database systems specially adapted for bioinformatics

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Engineering & Computer Science (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biophysics (AREA)
  • Chemical & Material Sciences (AREA)
  • Biotechnology (AREA)
  • General Health & Medical Sciences (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Evolutionary Biology (AREA)
  • Medical Informatics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Theoretical Computer Science (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Analytical Chemistry (AREA)
  • Genetics & Genomics (AREA)
  • Molecular Biology (AREA)
  • Bioethics (AREA)
  • Databases & Information Systems (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Pathology (AREA)
  • Biochemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Information Retrieval, Db Structures And Fs Structures Therefor (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Management, Administration, Business Operations System, And Electronic Commerce (AREA)
  • Image Processing (AREA)
  • Electrotherapy Devices (AREA)
  • Image Generation (AREA)
AT04758363T 2003-03-28 2004-03-24 Erstellung eines genomischen profils von regulationsfaktor-bindungsstellen ATE416261T1 (de)

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
US10/402,689 US20040191781A1 (en) 2003-03-28 2003-03-28 Genomic profiling of regulatory factor binding sites

Publications (1)

Publication Number Publication Date
ATE416261T1 true ATE416261T1 (de) 2008-12-15

Family

ID=32989771

Family Applications (1)

Application Number Title Priority Date Filing Date
AT04758363T ATE416261T1 (de) 2003-03-28 2004-03-24 Erstellung eines genomischen profils von regulationsfaktor-bindungsstellen

Country Status (12)

Country Link
US (1) US20040191781A1 (de)
EP (1) EP1608786B1 (de)
JP (3) JP2004303201A (de)
KR (1) KR20060015484A (de)
CN (1) CN1784498A (de)
AT (1) ATE416261T1 (de)
AU (1) AU2004225474A1 (de)
CA (1) CA2519674A1 (de)
DE (1) DE602004018115D1 (de)
MX (1) MXPA05010276A (de)
RU (1) RU2005133192A (de)
WO (1) WO2004087966A2 (de)

Families Citing this family (10)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20080163824A1 (en) * 2006-09-01 2008-07-10 Innovative Dairy Products Pty Ltd, An Australian Company, Acn 098 382 784 Whole genome based genetic evaluation and selection process
US20090049856A1 (en) * 2007-08-20 2009-02-26 Honeywell International Inc. Working fluid of a blend of 1,1,1,3,3-pentafluoropane, 1,1,1,2,3,3-hexafluoropropane, and 1,1,1,2-tetrafluoroethane and method and apparatus for using
CN101930502B (zh) * 2010-09-03 2011-12-21 深圳华大基因科技有限公司 表型基因的检测及生物信息分析的方法及系统
CA2818973A1 (en) * 2010-11-25 2012-05-31 Portable Genomics Llc Organization, visualization and utilization of genomic data on electronic devices
EP2861988B1 (de) * 2012-06-14 2019-05-22 The Whitehead Institute for Biomedical Research Genomweites verfahren zur bestimmung der interaktion von chemischen entitäten und deren zielmolekülen
US9989528B2 (en) * 2013-08-28 2018-06-05 Oregon Health & Science University Synthetic olgononucleotides for detection of nucleic acid binding proteins
CN103870719B (zh) * 2014-04-09 2017-06-16 苏州大学 一种人类基因启动子识别方法及系统
CN104156635B (zh) * 2014-07-08 2017-07-07 华南师范大学 基于公共子序列的基因芯片表达数据的opsm挖掘方法
EP3230911A1 (de) * 2014-12-10 2017-10-18 Koninklijke Philips N.V. Verfahren und systeme für die erstellung von co-expressionsnetzwerken von nichtcodierenden-codierenden genen
CN105912886A (zh) * 2016-03-29 2016-08-31 上海师范大学 一种预测蛋白质在rna病毒基因中的结合位点的方法

Family Cites Families (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6519583B1 (en) * 1997-05-15 2003-02-11 Incyte Pharmaceuticals, Inc. Graphical viewer for biomolecular sequence data

Also Published As

Publication number Publication date
US20040191781A1 (en) 2004-09-30
DE602004018115D1 (de) 2009-01-15
CN1784498A (zh) 2006-06-07
WO2004087966A3 (en) 2004-12-09
MXPA05010276A (es) 2006-03-17
AU2004225474A1 (en) 2004-10-14
KR20060015484A (ko) 2006-02-17
CA2519674A1 (en) 2004-10-14
RU2005133192A (ru) 2006-02-27
WO2004087966A2 (en) 2004-10-14
JP2004303201A (ja) 2004-10-28
EP1608786A2 (de) 2005-12-28
JP2008293505A (ja) 2008-12-04
JP2006031728A (ja) 2006-02-02
EP1608786B1 (de) 2008-12-03

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