ATE374834T1 - Methoden zur identifizierung evolutionär signifikanter änderungen in polynukleotid- und polypeptidsequenzen in domestizierten pflanzen und tieren - Google Patents

Methoden zur identifizierung evolutionär signifikanter änderungen in polynukleotid- und polypeptidsequenzen in domestizierten pflanzen und tieren

Info

Publication number
ATE374834T1
ATE374834T1 AT00960208T AT00960208T ATE374834T1 AT E374834 T1 ATE374834 T1 AT E374834T1 AT 00960208 T AT00960208 T AT 00960208T AT 00960208 T AT00960208 T AT 00960208T AT E374834 T1 ATE374834 T1 AT E374834T1
Authority
AT
Austria
Prior art keywords
animals
methods
significant changes
polynucleotide
polypeptide sequences
Prior art date
Application number
AT00960208T
Other languages
English (en)
Inventor
Walter Messier
James Sikela
Original Assignee
Evolutionary Genomics Llc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from US09/368,810 external-priority patent/US6274319B1/en
Priority claimed from PCT/US1999/020209 external-priority patent/WO2000012764A1/en
Priority claimed from US09/591,435 external-priority patent/US6280953B1/en
Application filed by Evolutionary Genomics Llc filed Critical Evolutionary Genomics Llc
Application granted granted Critical
Publication of ATE374834T1 publication Critical patent/ATE374834T1/de

Links

Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10—Sequence alignment; Homology search
    • C—CHEMISTRY; METALLURGY
    • C40—COMBINATORIAL TECHNOLOGY
    • C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
    • C40B40/00—Libraries per se, e.g. arrays, mixtures
    • C40B40/02—Libraries contained in or displayed by microorganisms, e.g. bacteria or animal cells; Libraries contained in or displayed by vectors, e.g. plasmids; Libraries containing only microorganisms or vectors
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1034—Isolating an individual clone by screening libraries
    • C12N15/1037—Screening libraries presented on the surface of microorganisms, e.g. phage display, E. coli display
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B10/00—ICT specially adapted for evolutionary bioinformatics, e.g. phylogenetic tree construction or analysis

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Physics & Mathematics (AREA)
  • Organic Chemistry (AREA)
  • Biotechnology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Genetics & Genomics (AREA)
  • Biophysics (AREA)
  • General Health & Medical Sciences (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • General Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • Molecular Biology (AREA)
  • Biomedical Technology (AREA)
  • Analytical Chemistry (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Evolutionary Biology (AREA)
  • Theoretical Computer Science (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Medical Informatics (AREA)
  • Crystallography & Structural Chemistry (AREA)
  • Plant Pathology (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Immunology (AREA)
  • Virology (AREA)
  • General Chemical & Material Sciences (AREA)
  • Medicinal Chemistry (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Peptides Or Proteins (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Breeding Of Plants And Reproduction By Means Of Culturing (AREA)
AT00960208T 1999-08-05 2000-08-01 Methoden zur identifizierung evolutionär signifikanter änderungen in polynukleotid- und polypeptidsequenzen in domestizierten pflanzen und tieren ATE374834T1 (de)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US09/368,810 US6274319B1 (en) 1999-01-29 1999-08-05 Methods to identify evolutionarily significant changes in polynucleotide and polypeptide sequences in domesticated plants and animals
PCT/US1999/020209 WO2000012764A1 (en) 1998-09-02 1999-09-01 Methods to identify polynucleotide and polypeptide sequences which may be associated with physiological and medical conditions
US15282599P 1999-09-07 1999-09-07
US09/591,435 US6280953B1 (en) 1998-01-30 2000-06-09 Methods to identify polynucleotide and polypeptide sequences which may be associated with physiological and medical conditions
PCT/US2000/040517 WO2001011088A2 (en) 1999-08-05 2000-08-01 Methods to identify evolutionarily significant changes in polynucleotide and polypeptide sequences in domesticated plants and animals

Publications (1)

Publication Number Publication Date
ATE374834T1 true ATE374834T1 (de) 2007-10-15

Family

ID=27387327

Family Applications (1)

Application Number Title Priority Date Filing Date
AT00960208T ATE374834T1 (de) 1999-08-05 2000-08-01 Methoden zur identifizierung evolutionär signifikanter änderungen in polynukleotid- und polypeptidsequenzen in domestizierten pflanzen und tieren

Country Status (9)

Country Link
EP (1) EP1250449B1 (de)
JP (1) JP2004500036A (de)
AT (1) ATE374834T1 (de)
AU (1) AU784869B2 (de)
CA (1) CA2390094A1 (de)
DE (1) DE60036645T2 (de)
DK (1) DK1250449T3 (de)
ES (1) ES2292467T3 (de)
WO (1) WO2001011088A2 (de)

Families Citing this family (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP1501942A4 (de) * 2002-01-16 2006-06-07 Evolutionary Genomics Llc Verfahren zur identifizierung evolutionsmässig signifikanter änderungen in polynukleotid- und polypeptidsequenzen in hauspflanzen und -tieren
JP2009297039A (ja) * 2002-01-16 2009-12-24 Evolutionary Genomics Inc 栽培用植物および家畜化動物中のポリヌクレオチドおよびポリペプチド配列における進化的に有意の変化を同定するための方法
CA2512110A1 (en) 2002-12-31 2004-07-22 Mmi Genomics, Inc. Compositions, methods, and systems for inferring bovine breed
US20080256659A1 (en) * 2005-09-02 2008-10-16 Evolutionary Genomics, Inc. Eg8798 and Eg9703 Polynucleotides and Uses Thereof
CN114300050B (zh) * 2021-12-29 2026-01-27 南京农业大学 一种鉴定谱系特异性扩增基因家族的方法

Family Cites Families (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP2539189B2 (ja) * 1983-03-21 1996-10-02 ウエブスター，ジヨン エー．，ジユニヤ 有機体の同定および特徴づけ方法

Also Published As

Publication number Publication date
CA2390094A1 (en) 2001-02-15
WO2001011088A2 (en) 2001-02-15
DK1250449T3 (da) 2007-11-05
JP2004500036A (ja) 2004-01-08
DE60036645T2 (de) 2008-07-17
WO2001011088A3 (en) 2001-12-13
AU784869B2 (en) 2006-07-13
AU7139900A (en) 2001-03-05
EP1250449B1 (de) 2007-10-03
ES2292467T3 (es) 2008-03-16
DE60036645D1 (de) 2007-11-15
EP1250449A2 (de) 2002-10-23

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