WO2024046864A1 - Biostimulants microbiens endophytes - Google Patents

Biostimulants microbiens endophytes Download PDF

Info

Publication number
WO2024046864A1
WO2024046864A1 PCT/EP2023/073235 EP2023073235W WO2024046864A1 WO 2024046864 A1 WO2024046864 A1 WO 2024046864A1 EP 2023073235 W EP2023073235 W EP 2023073235W WO 2024046864 A1 WO2024046864 A1 WO 2024046864A1
Authority
WO
WIPO (PCT)
Prior art keywords
radicals
formula
independently
endophyte
plant
Prior art date
Application number
PCT/EP2023/073235
Other languages
English (en)
Inventor
Stefan GILCH
Hans-Georg Hennemann
Linda MICHEEL
Julia NIEWALDA
Hanna-Christin LAKOWITZ
Moritz Sebastian ENGEMANN
Original Assignee
Evonik Operations Gmbh
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Evonik Operations Gmbh filed Critical Evonik Operations Gmbh
Publication of WO2024046864A1 publication Critical patent/WO2024046864A1/fr

Links

Classifications

    • A—HUMAN NECESSITIES
    • A01—AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
    • A01P—BIOCIDAL, PEST REPELLANT, PEST ATTRACTANT OR PLANT GROWTH REGULATORY ACTIVITY OF CHEMICAL COMPOUNDS OR PREPARATIONS
    • A01P21/00—Plant growth regulators
    • A—HUMAN NECESSITIES
    • A01—AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
    • A01N—PRESERVATION OF BODIES OF HUMANS OR ANIMALS OR PLANTS OR PARTS THEREOF; BIOCIDES, e.g. AS DISINFECTANTS, AS PESTICIDES OR AS HERBICIDES; PEST REPELLANTS OR ATTRACTANTS; PLANT GROWTH REGULATORS
    • A01N63/00—Biocides, pest repellants or attractants, or plant growth regulators containing microorganisms, viruses, microbial fungi, animals or substances produced by, or obtained from, microorganisms, viruses, microbial fungi or animals, e.g. enzymes or fermentates
    • A01N63/20—Bacteria; Substances produced thereby or obtained therefrom
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N1/00—Microorganisms, e.g. protozoa; Compositions thereof; Processes of propagating, maintaining or preserving microorganisms or compositions thereof; Processes of preparing or isolating a composition containing a microorganism; Culture media therefor
    • C12N1/20—Bacteria; Culture media therefor
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N1/00—Microorganisms, e.g. protozoa; Compositions thereof; Processes of propagating, maintaining or preserving microorganisms or compositions thereof; Processes of preparing or isolating a composition containing a microorganism; Culture media therefor
    • C12N1/20—Bacteria; Culture media therefor
    • C12N1/205—Bacterial isolates
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12R—INDEXING SCHEME ASSOCIATED WITH SUBCLASSES C12C - C12Q, RELATING TO MICROORGANISMS
    • C12R2001/00—Microorganisms ; Processes using microorganisms
    • C12R2001/01—Bacteria or Actinomycetales ; using bacteria or Actinomycetales

Definitions

  • the present invention relates to a novel isolated plant microbiome strain, in particular an endophyte, plants infected with such strains and related methods.
  • the isolated endophyte may be used in a composition for use as a biofertilizer and/or biostimulant or for bioprotection in plants.
  • the composition may further comprise an adjuvant.
  • the growth and/or yield of agricultural crops is limited by the amount of nitrogen that can be used or taken up by the plant.
  • exogenous nitrogen is added to the soil before or after sowing.
  • the nitrogen fertilizer can be of organic (e.g., urea, amino acids, manure, horn shavings) or mineral (e.g. ammonium nitrate, ammonium sulphate, potassium nitrate) origin in nature. What all these anthropogenic nitrogen fertilizers have in common is that their production, transport and/or application is energy-intensive and thus leads to a positive CO2 balance.
  • ammonium nitrate and urea which are by far the most widely used nitrogen fertilizers worldwide, have a large CO2 footprint because their common precursor ammonia (NH3), is derived from the Haber-Bosch process.
  • This process uses atmospheric nitrogen (N2) and hydrogen (H2) to synthesize ammonia (NH3) under high temperatures and pressures. This is process thus adds to climate change and is not good for the environment.
  • Biofertilizers are made up of living microorganisms that are able to reduce atmospheric nitrogen and thus make it available to the plant in form of ammonium/ ammonia or organically bound nitrogen. These organisms have to be applied in a metabolically active form to the seed, root or in rarer cases to the leaf.
  • biofertilizers apply the nitrogen-fixing microorganisms either to the surface of the seed, to the leaf or the soil. Due to this fact, the organisms are exposed to high stress from abiotic factors such as temperature, drought, pH, and wash-off from rain and high moisture. The effectiveness and efficiency of the biofertilizers is reduced. A large amount of the biofertilizers is thus needed to enable them to be effective in providing bioprotection to the plants and/or increasing yield of the crops. This increases the costs of farming.
  • biotic factors such as high competition with the already predominant plant or soil microbiome or the presence of antibiotically active substances also reduce the survival rate of the exogenously added nitrogen-fixing microorganisms on the respective surfaces. This also reduces the efficiency of the currently available biofertilizers.
  • FIGURES Figure 1 is a picture of maize growth (without treatment) after 6 eight weeks under different nitrogen fertilization (0 kgN/ha, 21 kgN/ha, 42 kgN/ha). Nutrient-poor Oxisol soil was used as test soil (substrate).
  • Figure 2 is a picture of maize growth at 21 kgN/ha, once without (left) and once with application of Paenibacillus xylanexedens DSM 34353, which was applied in a mixture with S301® to the leaf only.
  • Figure 3 is a graph showing shoot dry matter of maize at different nitrogen fertilizer levels, with and without application of Paenibacillus xylanexedens DSM 34353, which was applied in a mixture with S301®.
  • Figure 4 is a graph showing root dry matter of maize at different nitrogen fertilizer levels, with and without application of Paenibacillus xylanexedens DSM 34353, which was applied in a mixture with S301®.
  • the present invention attempts to solve the problems above by providing a novel isolated endophyte from Paenibacillus xylanexedens that is capable of being an effective and efficient biostimulant and/or biofertilizer.
  • These newly isolated endophytes which due to their unique genetic equipment and/ or in the presence of specific adjuvants, are able to enable and especially enforce the penetration of these endophytes into the plant or part thereof to which the endophyte is brought into contact with.
  • the newly isolated Paenibacillus xylanexedens strain is able to penetrate and proliferate in the plant tissue or seed.
  • a substantially purified or isolated endophyte wherein the endophyte is a strain of Paenibacillus xylanexedens, wherein the strain of Paenibacillus xylanexedens has Accession Number DSM 34353 and which provides bioprotection and/or biostimulant phenotypes to plants into which it is introduced.
  • the newly isolated endophyte, Paenibacillus xylanexedens with Accession Number DSM 34353, solves the problem of low stability of microbial nitrogen fixers as it is an endophytic organism that has both an unprecedented high nitrogen fixation capacity and the ability to penetrate into the endosphere of the plant that most other existing endophytes used in agriculture do not have.
  • the endophyte according to any aspect of the present invention was isolated from the inner plant tissue of a copper flower (Minuartia verna subsp. hercynica) and typed and sequenced as Paenibacillus xylanexedens sp. Greenhouse experiments demonstrated that Paenibacillus xylanexedens is capable of providing significant amounts of enzymatically fixed nitrogen to the plant in both seed and foliar applications to maize (Zea mays, variant LG 31 .224).
  • endophyte is an endosymbiont, which refers to a bacterial or fungal strain that lives within a plant for at least part of its life cycle without causing apparent disease.
  • the bacteria or the fungus is closely associated with the plant where the term ‘closely associated’ refers to the bacteria or fungus living on, in or in close proximity to the plant.
  • it may be endophytic, and living within the internal tissues of the plant, or epiphytic, and growing externally on the plant. There are many different endophytes that have been discovered.
  • endophytic inoculants for agriculture such as arbuscular mycorrhizae, rhizobia, and Azospirillium.
  • Clavicipitaceous fungi is also an endophyte that is used in agriculture.
  • the endophyte according to any aspect of the present invention is a strain of Paenibacillus xylanexedens with Accession Number DSM 34353.
  • the term “substantially purified” refers to an endophyte being free of other organisms.
  • the term includes, for example, an endophyte in axenic culture.
  • the endophyte is at least about 90% pure, more particularly at least about 95% pure, even more particularly at least about 98%, 99% or 99.5% pure.
  • the term ‘isolated’ refers to an endophyte according to any aspect of the present invention that is removed from its original environment (e.g., the natural environment if it is naturally occurring).
  • a naturally occurring endophyte present in a living plant is not isolated, but the same endophyte separated from some or all of the coexisting materials in the natural system, is isolated.
  • the isolated endophyte according to any aspect of the present invention may be a pure culture of a single strain and this single strain was submitted to the German Collection of Microorganisms and Cell Cultures (DSMZ) located in InhoffenstraBe 7B, 38124 Braunschweig, Germany on 11 th August 2022 and has Accession Number DSM 34353. Particles for keeping and modifying cells are available from the prior art, for example Sambrook/Fritsch/Maniatis (1989).
  • bioprotection and/or biostimulant may refer to the endophyte according to any aspect of the present invention possessing genetic and/or metabolic characteristics that result in a beneficial phenotype in a plant harbouring, or otherwise associated with, the endophyte.
  • Such beneficial properties or phenotypes resulting from the endophyte being present in the plant include improved resistance to pests and/or diseases, improved tolerance to water and/or nutrient stress, enhanced biotic stress tolerance, enhanced drought tolerance, enhanced water use efficiency, reduced toxicity and enhanced vigour in the plant with which the endophyte is associated, in comparison to a plant which is not associated with the endophyte according to any aspect of the present invention or to a endophyte such as standard toxic (ST) endophyte.
  • the bioprotection and/or biostimulant phenotype according to any aspect of the present invention includes nitrogen fixation in the plant into which the endophyte is introduced.
  • the pests and/or diseases may include, but are not limited to, fungal and/or bacterial pathogens, particularly, fungal.
  • the endophyte may result in the production of the bioprotectant compound in the plant with which it is associated.
  • bioprotectant compound refers to a compound that provides or aids in providing bioprotection to the plant with which it is associated against pests and/or diseases, such as bacterial and/or fungal pathogens.
  • a bioprotectant compound may also be known as a ‘biocidal compound’.
  • biostimulant refers to any substance or microorganism applied to plants with the aim to enhance nutrition efficiency, abiotic stress tolerance and/or crop quality traits, regardless of its nutrients content.
  • the endophyte according to any aspect of the present invention acts as a biostiumulant to the plant and/ or part thereof to which it comes in contact with.
  • a more detailed definition of biostimulant is provided at least in Ricci, M., General Principles to Justify Plant Biostimulant Claims, Frontiers in Plant Science (2019), 10.
  • the term ‘introduce’ refers to the contact and/or treatment of a plant or part thereof with an endophyte where the endophyte is delivered to the plant.
  • the endophyte is introduced into the plant or part thereof to encourage the endophyte to grow there.
  • Any method of introduction of the endophyte according to any aspect of the present invention to the plant or part thereof may be used.
  • the endophyte may be sprayed on or inoculated in the plant or part thereof.
  • the endophyte may be inoculated for at least 1 , 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 , 12, 13 or 14 days before they start to grow in the plant.
  • the endophyte may be sprayed on the leaves of the plant (i.e. foliar application.
  • the spraying process takes place either only in the early development stage of the plant (around the six-leaf stage) or multiple times (around the six leaf stage and several stages of the emerging/adult plant).
  • a skilled person would be capable of identifying the best introduction process to be used on the plant.
  • the plant or part thereof may be infected with the endophyte by a method known in the art. More in particular, the plant or part thereof may be infected with the endophyte using a method selected from the group consisting of inoculation, spraying, breeding, crossing, hybridisation, transduction, transfection, transformation and/or gene targeting and combinations thereof.
  • the endophyte according to any aspect of the present invention is the Paenibacillus xylanexedens strain with Accession Number DSM 34353.
  • the sequence of the strain has been divided into loci and comprises the nucleotide sequence of SEQ ID NOs:1-70 and variants thereof.
  • the sequence of the 16S ribosomal RNA is SEQ ID NO:78 and/or SEQ ID NO:41.
  • variant comprises amino acid or nucleic acid sequences, respectively, that are at least 70, 75, 80, 85, 90, 92, 94, 95, 96, 97, 98 or 99 % identical to the reference amino acid or nucleic acid sequence, wherein preferably amino acids other than those essential for the function, for example the catalytic activity of a protein, or the fold or structure of a molecule are deleted, substituted or replaced by insertions or essential amino acids are replaced in a conservative manner to the effect that the biological activity of the reference sequence or a molecule derived therefrom is preserved.
  • the state of the art comprises algorithms that may be used to align two given nucleic acid or amino acid sequences and to calculate the degree of identity, see Arthur Lesk (2008), Thompson et al., 1994, and Katoh et al., 2005.
  • the term “variant” is used synonymously and interchangeably with the term “homologue”.
  • Such variants may be prepared by introducing deletions, insertions or substitutions in amino acid or nucleic acid sequences as well as fusions comprising such macromolecules or variants thereof.
  • the term “variant”, with regard to amino acid sequence comprises, in addition to the above sequence identity, amino acid sequences that comprise one or more conservative amino acid changes with respect to the respective reference or wild type sequence or comprises nucleic acid sequences encoding amino acid sequences that comprise one or more conservative amino acid changes.
  • the term “variant” of an amino acid sequence or nucleic acid sequence comprises, in addition to the above degree of sequence identity, any active portion and/or fragment of the amino acid sequence or nucleic acid sequence, respectively, or any nucleic acid sequence encoding an active portion and/or fragment of an amino acid sequence.
  • active portion refers to an amino acid sequence or a nucleic acid sequence, which is less than the full-length amino acid sequence or codes for less than the full-length amino acid sequence, respectively, wherein the amino acid sequence or the amino acid sequence encoded, respectively retains at least some of its essential biological activity.
  • a biostimulant comprising an isolated endophyte, wherein the endophyte is a strain of Paenibacillus xylanexedens with Accession Number DSM 34353.
  • the endophyte is according to any aspect of the present invention.
  • composition comprising: an isolated endophyte, wherein the endophyte is a strain of Paenibacillus xylanexedens with Accession Number DSM 34353., and an adjuvant.
  • composition according to any aspect of the present invention solves the problem of low uptake rates and uptake kinetics of endophytic organisms into the endosphere of the plant.
  • Adjuvants enable both an efficient uptake through stomata on the upper and most prominent on the lower surface of the plants, little injury wounds and growth gaps in the cuticula.
  • the use of adjuvants to support the endophytic process allows the use of lower drug concentrations (CFU/mL or CFU/g) because uptake occurs more effectively than without the addition of adjuvants.
  • the endophyte is the Paenibacillus xylanexedens strain with Accession Number DSM 34353.
  • the isolated Paenibacillus xylanexedens strain according to any aspect of the present invention has the appropriate genetic equipment to invade the plant tissue and survive and proliferate within the tissue. This in combination with the suitable penetration sites on the plant and/or seed surfaces with which the Paenibacillus xylanexedens strain is inoculated enables the endophytes to successfully penetrate the plant tissue via the stomata of the leaves or via small injuries or growth gaps. Active penetration of the non-uniformly shaped cuticle has also been reported.
  • the presence of an adjuvant in the composition according to any aspect of the present invention enables a successful uptake of the endophyte according to any aspect of the present invention into the plant tissue (endosphere) efficiently and effectively.
  • an ‘adjuvant’ as used herein refers to an ingredient or a substance in the composition according to any aspect of the present invention that increases or modifies the activity of the other ingredients namely, the isolated Paenibacillus xylanexedens strain.
  • the adjuvants according to any aspect of the present invention are biocompatible adjuvant (active ingredient mediator) that are added to the suspension of microorganisms to form the composition according to any aspect of the present invention.
  • Any adjuvant known in the art may be used in the composition according to any aspect of the present invention.
  • the adjuvants according to any aspect of the present invention may be selected from the group consisting of (A), (B) or (C) and mixtures thereof wherein (A), (B) or (C) are:
  • D 1 is P 1 2SiO2/2, D' is P 1 P 2 SiO2/2, o is 2, p is between 0 and 0.1 , q is between 1 .0 and 1.15,
  • P 1 are independently hydrocarbyl having 1 to 8 carbon atoms
  • P 2 are independently a polyether radical of the formula (III)
  • P 3 are independently divalent hydrocarbyl radicals having 2 to 8 carbon atoms, P 5 is hydrogen; and/or
  • R radicals are each independently identical or different, aliphatic or aromatic hydrocarbyl radicals having 1 to 10 carbon atoms
  • the R4 radicals are each independently identical or different R
  • the R1 , R2 and R3 radicals are each independently different polyether radicals of general formula (V)
  • R5 are independently the same or different and are each a methyl, acetyl or hydrogen radical. More in particular, the adjuvants may be selected from the group consisting of BREAK-THRU® S 301 , BREAK-THRU® SP 133, BREAK-THRU® S 255.
  • the adjuvants used according to any aspect of the present invention leads to a reduction of the surface tension at the stomata or where there are injuries and thus to a lower rejection or an improved flow of the particles (microorganisms) through the orifices into the plant or part thereof where the microorganisms particularly Paenibacillus xylanexedens is inoculated.
  • the use of adjuvants enables/ accelerates the endophytic process of bacteria uptake.
  • enhanced uptake also allows translocation of bacteria across the phloem from the leaf to the root, from where nitrogen fixation can also be enhanced. This results in the locally applied biostimulant acquiring a systemic character. Based on its systemic character, there is the advantage that in shoot-forming plants also the shoot is already inoculated with the biostimulant and thus passes the active ingredient on to the new generation.
  • adjuvants also allows a uniform distribution of the Paenibacillus xylanexedens from the upper leaf surface to the lower leaf surface where most (opened) stomata are present. Thus, faster and more widespread penetration of endophytes into plant tissue is enabled. Without the use of biocompatible adjuvants, especially in the case of foliar application, reaching the stomata on the underside of the leaf would be particularly hard if not impossible.
  • adjuvants with “anti- rinse-off’ properties also increases the residence time on the upper surface of the leaf and thus promotes endophytic uptake into the plant tissue. The presence of the adjuvant reduces early wash-off of the endophytic nitrogen fixating organisms.
  • the adjuvant is (A):
  • At least one radical R” corresponds to a radical of the formula R' — C(O) — . More in particular, M, D and T may be:
  • polyglycerol esters of the mixture according to any aspect of the present invention is of the Formula (1(a)):
  • the radicals R” of the formula R' — C(O) — may be independent of each another identical or different acyl radicals of saturated or unsaturated fatty acids, where the fatty acids include 4 up to 40 carbon atoms, particularly, the fatty acids are selected from the group consisting of butyric acid (butanoic acid), caproic acid (hexanoic acid), caprylic acid (octanoic acid), capric acid (decanoic acid), lauric acid (dodecanoic acid), myristic acid (tetradecanoic acid), palmitic acid (hexadecanoic acid), stearic acid (octadecanoic acid), arachidic acid (eicosanoic acid), behenic acid (docosanoic acid), lig
  • the fatty acid may be a mixture of rapeseed oil acids, soya fatty acids, sunflower fatty acids, peanut fatty acids and tall oil fatty acids.
  • the fatty acids may be radicals of oleic acid.
  • the molar mass of the lipophilic molecule moiety is the arithmetic mean of the total of the molar masses of all of the radicals R' which are present in the molecule.
  • Sources of suitable fatty acids or fatty acid esters, especially glycerides can be vegetable or animal fats, oils or waxes.
  • vegetable or animal fats, oils or waxes can be vegetable or animal fats, oils or waxes.
  • the adjuvant is (B):
  • D 1 is P 1 2SiO2/2, D' is P 1 P 2 SiO2/2, o is 2, p is between 0 and 0.1 , particularly 0 q is between 1.0 and 1.15, particularly between 1.0 and 1.10, especially particularly between 1 .00 and 1 .05,
  • P 1 are independently hydrocarbyl having 1 to 8 carbon atoms, particularly methyl, ethyl, propyl or phenyl radicals, especially particularly methyl radicals
  • P 2 are independently a polyether radical of the formula (III)
  • P 3 are independently divalent hydrocarbyl radicals having 2 to 8 carbon atoms, particularly ethylene, propylene, 1 -methylpropylene, 1 ,1 -dimethylpropylene radical, especially particularly — CH2CH2CH2— ,
  • P 5 is hydrogen.
  • the polyether-modified siloxanes of formula (II) have a biodegradability of greater than 60%, more particularly of greater than or equal to 63% and especially particularly of greater than or equal to 65%, the maximum value being 100%.
  • the polyether radical calculated without P 3 O and calculated without P 5 , has a molar mass M(PE) calculated by 44 g/mol*m+58 g/mol*n where the indices m and n relate to formula (III). More in particular, the values of M(PE) are: lower limits M(PE) greater than 520 g/mol, particularly greater than 530 g/mol, more particularly greater than 535 g/mol; upper limit M(PE) less than 660 g/mol, particularly less than 630 g/mol, more particularly less than 600 g/mol.
  • the value of M(PE) is greater than 520 g/mol and less than 660 g/mol, especially greater than 535 g/mol and less than 600 g/mol.
  • the sum total of m+n is greater than 9 up to 19, more in particular, than 9.5 up to 15 and even more in particular greater than 10 up to 12.
  • the polyether-modified siloxane used in the composition according to any aspect of the present invention is a polyether-modified siloxane of the formula (II) with an index c between 1 and 1 .05, where the indices of the polyether radical of formula (III) are m from 3.4 to 11 .0 and n from 2.5 to 8.0.
  • the polyether-modified siloxane used in the composition according to any aspect of the present invention is a polyether-modified siloxane of the formula (II) with an index c between 1 and 1 .05, where the ratio m/n is 1 .9 to 2.8.
  • the polyether-modified siloxane used in the composition according to any aspect of the present invention is a polyether- modified siloxane of the formula (II) with an index c between 1 and 1 .05, where the molar mass of the polyether residue M(PE) is greater than 520 g/mol and less than 660 g/mol.
  • the polyether-modified siloxane used in the composition according to any aspect of the present invention is a polyether-modified siloxane of the formula (II) with an index c between 1 and 1 .05, where the P 5 radical is hydrogen or with an index c between 1 and 1 .05, where the molar mass of the polyether residue M(PE) is greater than 520 g/mol and less than 660 g/mol and the Ps radical is hydrogen.
  • the polyether-modified siloxane used in the composition according to any aspect of the present invention is a polyether-modified siloxane of the formula (II) does not include any further polyether-modified siloxanes apart from those of formula (II).
  • the adjuvant is (C), an organomodified polysiloxane of formula (IV)
  • R radicals are each independently identical or different, aliphatic or aromatic hydrocarbyl radicals having 1 to 10 carbon atoms, preferably methyl radicals
  • the R4 radicals are each independently identical or different R
  • the R1 , R2 and R3 radicals are each independently different polyether radicals of general formula (V)
  • R5 are independently the same or different and are each a methyl, acetyl or hydrogen radical preferably with the proviso that the molecular weight of the polyether radical of Formula (V) is greater than 200 g/mol, preferably from greater than 400 to 2000 g/mol, and the proportion of ethylene oxide is greater than 45% by mass in the polyether, and the percentage by mass of ethylene oxide in the polyether radical R2 is at least 9% by mass greater than the percentage of ethylene oxide in the polyether radical R1 , based in each case on the polyether radicals of the Formula (V), where the radicals of the Formula (V) may each be formed randomly, in a gradient or in blocks.
  • the units designated by the index ‘g’ are those which have originated from propylene oxide
  • the units designated by the index ‘h’ are those which have originated from butylene oxide
  • the units designated by the index ‘i’ are those which have originated from styrene oxide.
  • the indices ‘a to d’ and ‘e to i’ may be natural whole numbers, or weight averages.
  • the indices are preferably weight averages.
  • composition according to any aspect of the present invention may comprise any one of the adjuvants (A), (B) or (C).
  • the composition may comprise a mixture of adjuvants such as (A) and (B), (A) and (C), (B) and (C) or (A), (B) and (C).
  • the composition according to any aspect of the present invention may comprise more than one adjuvant (A) or more than one adjuvant (B) or more than one adjuvant (C).
  • composition according to any aspect of the present invention may further comprise an emulsifier.
  • the emulsifier in the mixture according to any aspect of the present invention may be different from the adjuvant.
  • the emulsifier may be selected from the group consisting of fatty acid esters of polyhydric alcohols and their polyalkylene glycol derivatives, polyglycol derivatives of fatty acids and fatty alcohols, sorbitan fatty acid esters, ethoxylated and/or propoxylated sorbitan fatty acid esters, propoxylated sorbitan fatty acid esters, alkylphenol ethoxylates, propoxylates, alkylphenol ethoxylates, aminoxylated oxides, amine oxides, propoxylated amine oxides, aminoxylated amine oxides, aminoxylated propylene oxides, acetylenediol surfactants, ethoxylated and/or propoxylated acetylenediol
  • the emulsifier is selected from the group consisting of sorbitan fatty acid esters and ethoxylated sorbitan fatty acid esters. More in particular, the emulsifier is an ethoxylated sorbitan fatty acid ester or mixtures thereof.
  • the acyloxy radicals of the sorbitan fatty acid ester or ethoxylated sorbitan fatty acid ester have 4 to 40, in particular 8 to 22, more in particular 10 to 18 carbon atoms and/or that the sorbitan fatty acid ester or ethoxylated sorbitan fatty acid ester has 0 to 40, particularly 10 to 30, more particularly 15 to 25 oxyethylene groups.
  • the fatty acids or fatty acid residues of the sorbitan fatty acid esters are particularly defined like the fatty acids or fatty acid residues of the polyglycerol esters.
  • acyl radicals are particularly derived from fatty acid mixtures containing oleic acid, stearic acid, palmitic acid and gamma-linolenic acid, said fatty acids particularly making up at least 85% by weight in the fatty acid mixture.
  • Ethoxylated sorbitan fatty acid esters are particularly used, the mass fraction of oleic acid acyl residues being at least 75%, particularly 85%, more particularly 95%, based on the mass of all acyl residues.
  • the emulsifier according to any aspect of the present invention has an HLB value of greater than or equal to 9, particularly greater than or equal to 10, more particularly greater than or equal to 11 .
  • the HLB value may be a maximum of 16, more particularly a maximum of 15, even more particularly a maximum of 13.
  • the emulsifier has an HLB value of 9 to 16, particularly 10 to 15, more particularly 11 to 13.
  • the HLB value is determined as described above.
  • the HLB value of the sorbitan fatty acid esters and/or ethoxylated sorbitan fatty acid esters is particularly determined as for the polyglycerol esters.
  • the molar mass of the lipophilic part of the molecule results from the arithmetic mean of the sum of the molar masses of all radicals R'” present in the molecule as part of the acyl radicals R'” - (CO) -.
  • the radicals R'” are preferably as defined for the polyglycerol esters.
  • the radical R'” as part of an acyl radical R'” - (CO) - of the sorbitan fatty acid ester or ethoxylated sorbitan fatty acid ester is particularly selected from the group consisting of monovalent aliphatic, saturated or unsaturated hydrocarbon radicals with 3 to 39, preferably 7 to 21 , particularly 9 to 17 carbon atoms.
  • the calculation of the molar mass of the entire molecule is carried out as defined above.
  • the emulsifier is polyethylene glycol-20-sorbitan trioleate.
  • the number 20 indicates the average number of ethylene oxide units in the polyethylene glycol residue.
  • the HLB value of the polyglycerol ester and of the emulsifier are matched to one another.
  • the polyglycerol ester has an HLB value of less than or equal to 8, particularly less than or equal to 7, more particularly less than or equal to 6.5, and the at least one emulsifier has an HLB value of greater than or equal to 9, particularly greater than or equal to 10, in particular greater than or equal to 11 .
  • the at least one polyglycerol ester has an HLB value of 0.5 to 8, particularly from 1 to 7, more particularly from 2 to 6.5 and the at least one emulsifier has an HLB value of 9 to 16, particularly from 10 to 15, more particularly from 11 to 13.
  • the emulsifier is polyethylene glycol 20 sorbitan trioleate.
  • composition comprising a culture medium of an isolated endophyte, and the endophyte, wherein the endophyte is a strain of Paenibacillus xylanexedens with Accession Number DSM 34353.
  • the strains and compositions according to any aspect of the present invention can be obtained by culturing the strains of Paenibacillus xylanexedens according to methods well known in the art, including by using the appropriate media.
  • Conventional large-scale microbial culture processes include submerged fermentation, solid state fermentation, or liquid surface culture.
  • the endophyte may be cultured under aerobic or anaerobic conditions and may be cultured in a bioreactor.
  • the endophytes, and metabolites in culture media resulting from culturing may be used directly or concentrated by conventional industrial methods, such as centrifugation, tangential-flow filtration, depth filtration, and evaporation.
  • the concentrated fermentation broth may be washed, for example via a diafiltration process, to remove residual fermentation broth and metabolites.
  • the fermentation broth or broth concentrate can be dried with or without the addition of carriers using conventional drying processes or methods such as spray drying, freeze drying, tray drying, fluidized-bed drying, drum drying, or evaporation.
  • the resulting dry products may be further processed, such as by milling or granulation, to achieve a specific particle size or physical format. Carriers may also be added post-drying.
  • the preparation of the strains is a supernatant of the fermentation broth.
  • the composition according to any aspect of the present invention may be prepared according to the method provided in EP21198571 or EP21202623 wherein the endophyte according to any aspect of the present invention is first spray- dried and then brought into contact with at least one adjuvant.
  • the adjuvant may be (A), (B) or (C) according to any aspect of the present invention. More in particular, the adjuvant is (A), a polyglycerol ester with general formula (I). Even more in particular, the polyglycerol ester is combined with at least one emulsifier according to any aspect of the present invention.
  • a plant or part thereof infected with one or more endophytes according to any aspect of the present invention.
  • the plant or part thereof infected with the endophyte may produce a bioprotectant compound.
  • the plant or part thereof includes an endophyte-free host plant or part thereof stably infected with said endophyte.
  • any plant or part thereof may be inoculated with the endophyte according to any aspect of the present invention.
  • the plant inoculated with the endophyte may be a grass or nongrass plant suitable for agriculture, specifically a forage, turf, or bioenergy grass, or a grain crop or industrial crop.
  • the grain crop or industrial crop species may be selected from the group consisting of wheat, barley, oats, corn/ maize, any grain legumes such as chickpeas, triticale, fava beans, lupins, field peas, canola, cereal rye, vetch, lentils, millet/panicum, safflower, linseed, sorghum, sunflower, maize, canola, mungbeans, soybeans, oilseed crops, tomato and cotton.
  • any grain legumes such as chickpeas, triticale, fava beans, lupins, field peas, canola, cereal rye, vetch, lentils, millet/panicum, safflower, linseed, sorghum, sunflower, maize, canola, mungbeans, soybeans, oilseed crops, tomato and cotton.
  • the endophyte according to any aspect of the present invention may be transferred through seed from one plant generation to the next.
  • the endophyte may then spread or locate to other tissues as the plant grows, i.e., to roots.
  • the endophyte may be recruited to the plant root, e.g. from soil, and spread or locate to other tissues.
  • a plant, plant seed or other plant part derived from a plant or part thereof according to any aspect of the present invention.
  • the plant, plant seed or other plant part may produce a bioprotectant compound.
  • the endophyte-infected plant or part thereof may be cultivated by known techniques.
  • the person skilled in the art may readily determine appropriate conditions depending on the plant or part thereof to be cultivated.
  • a method of producing a composition for bioprotection and/or biostimulant comprising combining: an isolated endophyte, wherein the endophyte is a strain of Paenibacillus xylanexedens, and an adjuvant.
  • a method of providing bioprotection to a plant or part thereof comprising contacting the composition according to any aspect of the present invention to the plant or part thereof.
  • the part thereof of the plant may be, for example, a seed.
  • the composition according to any aspect of the present invention is introduced to the leaf, roots or the seeds of the plant.
  • the composition according to any aspect of the present invention is introduced to the leaf of the plant. Applying the endophytes to the foliage allows the user to treat the growing or adult plant at several distinct times after sowing (if needed). In contrast, only a single application is possible during soil application (prior to seeding) or seed application (during seed treatment).
  • foliar application of Paenibacillus xylanexedens allows for reduced use of the microbial agent because higher CFU loss (several log levels) can be expected within a short period of time (lower stability of Gram-negative organisms on the seed or in the soil) when the seed or soil is inoculated.
  • composition according to any aspect of the present invention to provide bioprotection to a plant or part thereof.
  • Table 1 List of sites and plants used to collect Paenibacillus xylanexedens DSM34353
  • a trowel or small shovel was used to gently excavate the soil around individual plants, and to lift the roots with minimal disturbance. The removal of root parts was carried out gently and without damaging the entire root system. Similarly, leaf material was harvested from individual plants without causing damage to the plants. Plant material was placed into separate plastic bag, and the bags were then carefully packed into insulated and chilled transport bags. After field collection, plant material was chilled in a refrigerator at 5°C till further use.
  • the leaves and roots of each plant were washed separately under slow running tap water for 15 minutes in sterile distilled water to remove adhering soil particles and the majority of microbial surface epiphytes as a part of pre-treatment. Then the samples were rinsed three times for one minute each time with sterile distilled water in the laminar air flow cabinet. Roots and leaves were cut into sections. The plant material was put in petri dishes, soaked in distilled water and drained. It was rinsed in 70% ethanol for 30 seconds and then sterilized with 3% sodium hypochlorite for 3 minutes for roots and for 5 minutes for leaves. The tissue was then washed ten times with sterile water. Validation of the surface sterilization procedure was done by culturing aliquots of water from the last rinsing onto nutrient media.
  • roots and leaves were cut into pieces 2-3 cm long. The external portion of the leaves approximately 0.5 cm from the margin was removed with a sterile blade. Each piece of both roots and leaves were placed on nutrient agar medium and supplemented with 100 mg L-1 of cycloheximide to inhibit possible fungal development. Plates with plant tissues were sealed using parafilm tape and incubated at 28 ⁇ 2°C in order to recover the maximum possible colonies of bacterial endophytes. After 48 hours, morphologically different bacterial colonies were selected from root tips and leaf segments and after fourfold serial dilution repeatedly streaked in order to achieve enriched bacterial isolates. In order to obtain pure cultures enriched cultures were streaked out on individual 50% TS agar plates and incubated for 2-3 days at 30°C.
  • Colony morphology was investigated by eye to examine purity of the cultures. Colonies that appeared different were isolated and again streaked on separate 50% TS agar plates for a new cultivation. That way, mixed cultures were divided into monoseptic isolates. The pureness was confirmed by microscopic analysis and subsequent alignments of 16S sequences with corresponding sequences from the NCBI rRNA/ITS databases using “blastn”. The latter procedure was provided as a service by VERMICON (Hallbergmoos, Germany).
  • Fertilizer dose rate was calculated on basis of 1 .000.000 kg soil I ha. Fertilization was conducted with phosphate, potassium and magnesium sulfate (25 kg P/ha, 50 kg K/ha and 15 kg Mg/ha, respectively). Fertilization with Nitrogen was performed with DEMOGRAN® 45 (Domo, Germany) that contains water soluble 21% N and 24% S; (24 and 48 kg N/ha). 2 L pots were used and filled with 2 kg of sandy soil.
  • Paenibacillus xylanexedens DSM34353 was applied to the leaves in combination with an adjuvant. In the process, 1 mL of spray volume was applied to the leaves of the young maize plant. The mixture contained 300.000 CFU of Paenibacillus xylanexedens DSM34353 and 0.1 % of S301® (Evonik Industries, Germany) as adjuvant for surface wetting as well as stomata flooding. S301® has the formula of adjuvant (B) according to any aspect of the present invention. In particular, S301® has the formula
  • the individual bacterial suspensions each have 2.5 x 10 8 CFU/mL, so 400 mL of experimental product is required per 100 000 grains. This results in 4 mL of experimental product (with 2.5 x 10 8 CFU) per 1000 grains.
  • a mix of 4 mL of experimental product with 1 mL of PREMAX and pickle to 1000 corn kernels was made, then left to dry in the dark (e.g. open paper bag). None was added for the controls.

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Health & Medical Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Biotechnology (AREA)
  • Genetics & Genomics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Organic Chemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Virology (AREA)
  • Microbiology (AREA)
  • Medicinal Chemistry (AREA)
  • Biomedical Technology (AREA)
  • Environmental Sciences (AREA)
  • Plant Pathology (AREA)
  • General Engineering & Computer Science (AREA)
  • Pest Control & Pesticides (AREA)
  • Tropical Medicine & Parasitology (AREA)
  • Biochemistry (AREA)
  • Dentistry (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • General Chemical & Material Sciences (AREA)
  • Agronomy & Crop Science (AREA)
  • Botany (AREA)
  • Agricultural Chemicals And Associated Chemicals (AREA)

Abstract

La présente invention concerne une composition comprenant : - un endophyte isolé, l'endophyte étant une souche de Paenibacillus xylanexedens, et - un adjuvant, la souche de Paenibacillus xylanexedens ayant pour numéro d'accession DSM 34353.
PCT/EP2023/073235 2022-09-01 2023-08-24 Biostimulants microbiens endophytes WO2024046864A1 (fr)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
EP22193373 2022-09-01
EP22193373.2 2022-09-01

Publications (1)

Publication Number Publication Date
WO2024046864A1 true WO2024046864A1 (fr) 2024-03-07

Family

ID=83151553

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/EP2023/073235 WO2024046864A1 (fr) 2022-09-01 2023-08-24 Biostimulants microbiens endophytes

Country Status (1)

Country Link
WO (1) WO2024046864A1 (fr)

Citations (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2012163322A1 (fr) * 2011-05-27 2012-12-06 Prophyta Biologischer Pflanzenschutz Gmbh Préparation liquide pour la protection biologique des végétaux, son procédé de production et son utilisation
US8580225B2 (en) 2011-07-05 2013-11-12 Evonik Goldschmidt Gmbh Use of hydrophilic organomodified siloxanes as a processing aid for melt granulation
KR101621732B1 (ko) * 2016-02-03 2016-05-17 충북대학교 산학협력단 식물 생장을 촉진하는 내염성 패니바실러스 사이렌엑시던스 균주 및 이의 용도
US10299471B2 (en) 2015-06-16 2019-05-28 Evonik Degussa Gmbh Biodegradable super-spreading, organomodified trisiloxane
US10390530B2 (en) 2014-10-08 2019-08-27 Evonik Degussa Gmbh Use of hydrophobic, self-emulsifying polyglycerol esters as adjuvants and anti-spray-drift agents
WO2019201777A1 (fr) * 2018-04-19 2019-10-24 Evonik Degussa Gmbh Siloxanes biocompatibles pour la formulation de micro-organismes
WO2020234035A1 (fr) * 2019-05-20 2020-11-26 Evonik Operations Gmbh Utilisation d'esters de polyglycérol comme supports pour des substances actives microbiologiques

Patent Citations (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2012163322A1 (fr) * 2011-05-27 2012-12-06 Prophyta Biologischer Pflanzenschutz Gmbh Préparation liquide pour la protection biologique des végétaux, son procédé de production et son utilisation
US8580225B2 (en) 2011-07-05 2013-11-12 Evonik Goldschmidt Gmbh Use of hydrophilic organomodified siloxanes as a processing aid for melt granulation
US10390530B2 (en) 2014-10-08 2019-08-27 Evonik Degussa Gmbh Use of hydrophobic, self-emulsifying polyglycerol esters as adjuvants and anti-spray-drift agents
US10299471B2 (en) 2015-06-16 2019-05-28 Evonik Degussa Gmbh Biodegradable super-spreading, organomodified trisiloxane
KR101621732B1 (ko) * 2016-02-03 2016-05-17 충북대학교 산학협력단 식물 생장을 촉진하는 내염성 패니바실러스 사이렌엑시던스 균주 및 이의 용도
WO2019201777A1 (fr) * 2018-04-19 2019-10-24 Evonik Degussa Gmbh Siloxanes biocompatibles pour la formulation de micro-organismes
WO2020234035A1 (fr) * 2019-05-20 2020-11-26 Evonik Operations Gmbh Utilisation d'esters de polyglycérol comme supports pour des substances actives microbiologiques

Non-Patent Citations (4)

* Cited by examiner, † Cited by third party
Title
PRIYANKA VERMA ET AL: "Molecular diversity and multifarious plant growth promoting attributes of Bacilli associated with wheat ( Triticum aestivum L.) rhizosphere from six diverse agro-ecological zones of India : Diversity and plant growth promoting attributes of Bacilli", JOURNAL OF BASIC MICROBIOLOGY, vol. 56, no. 1, 16 November 2015 (2015-11-16), BERLIN, DE, pages 44 - 58, XP055462118, ISSN: 0233-111X, DOI: 10.1002/jobm.201500459 *
RICCI, M: "General Principles to Justify Plant Biostimulant Claims", FRONTIERS IN PLANT SCIENCE, vol. 10, 2019
SELVAKUMAR GOPAL ET AL: "Spore associated bacteria of arbuscular mycorrhizal fungi improve maize tolerance to salinity by reducing ethylene stress level", PLANT GROWTH REGULATION, SPRINGER NETHERLANDS, DORDRECHT, vol. 81, no. 1, 30 May 2016 (2016-05-30), pages 159 - 165, XP036129355, ISSN: 0167-6903, [retrieved on 20160530], DOI: 10.1007/S10725-016-0184-9 *
VARGAS PABLO ET AL: "Optimizing Biocontrol Activity of Paenibacillus xylanexedens for Management of Hairy Root Disease in Tomato Grown in Hydroponic Greenhouses", AGRONOMY, vol. 11, no. 5, 21 April 2021 (2021-04-21), pages 817, XP093017176, DOI: 10.3390/agronomy11050817 *

Similar Documents

Publication Publication Date Title
JP6139544B2 (ja) 微生物接種剤およびそれを含む肥料組成物
US9580363B2 (en) Nitrogen-fixing bacterial inoculant for improvement of crop productivity and reduction of nitrous oxide emission
KR101408683B1 (ko) 항진균성 미생물 배양체를 포함하는 유기질비료 조성물 및 이의 제조방법
US9499447B2 (en) Stable organic-carrier-based microbial inoculants and cultures
CN109810924B (zh) 一种重度盐碱地改良方法
CN108728374B (zh) 一株粘着剑菌dt8菌株及其在降解多效唑中的应用
Matteoli et al. Herbaspirillum
KR101922428B1 (ko) 쌈채류의 생육촉진 및 쌈채류의 내고온성, 내건성을 갖도록 하는 신규 미생물 바실러스 토요넨시스 sb19, 이를 포함하는 미생물 제제 및 이를 포함하는 생물비료
CN115867640A (zh) 属于乳杆菌属的新微生物、以及对青枯雷尔氏菌或假青枯雷尔氏菌引起的植物病害的防治剂及防治方法
EP1204325A1 (fr) Procede favorisant la croissance des plantes utilisant l'hydrogene gazeux
US11674118B2 (en) PGPR compositions and methods for improved cultivation of tomato and potato species
Gantar Mechanical damage of roots provides enhanced colonization of the wheat endorhizosphere by the dinitrogen-fixing cyanobacterium Nostoc sp. strain 2S9B
Elhadidy Performance of some new bioformulations against tomato fusarium wilt
Senthil et al. Efficacy of liquid Pseudomonas fluorescens (Pf1) against sugarcane red rot, caused by Colletotrichum falcatum, under field conditions
WO2024046864A1 (fr) Biostimulants microbiens endophytes
WO2024046855A1 (fr) Biostimulants microbiens endophytes
Akbari et al. Stimulation of plant growth and drought tolerance on wheat by endophytic bacteria from dry environment
WO2024046858A1 (fr) Biostimulants microbiens endophytes
ARMENTA-BOJÓRQUEZ et al. Organic versus synthetic fertilisation of beans (Phaseolus vulgaris L.) in Mexico
EP3462879B1 (fr) Méthode pour améliorer le développement des plantes
AU2019351535A1 (en) Solid composition for agricultural and veterinary use
Kıdoğlu et al. Yield enhancement of hydroponically grown tomatoes by rhizobacteria
CN112226387B (zh) 一株白色杆菌及其在防治玉米茎基腐病中的应用
RU2760337C1 (ru) Препарат для увеличения урожайности яровой пшеницы
CN114958653B (zh) 一种枯草芽孢杆菌及其应用

Legal Events

Date Code Title Description
121 Ep: the epo has been informed by wipo that ep was designated in this application

Ref document number: 23764247

Country of ref document: EP

Kind code of ref document: A1