WO2023236468A1 - Coronavirus s protein variant and use thereof - Google Patents

Coronavirus s protein variant and use thereof Download PDF

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WO2023236468A1
WO2023236468A1 PCT/CN2022/136551 CN2022136551W WO2023236468A1 WO 2023236468 A1 WO2023236468 A1 WO 2023236468A1 CN 2022136551 W CN2022136551 W CN 2022136551W WO 2023236468 A1 WO2023236468 A1 WO 2023236468A1
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protein
composition
protein variant
nucleic acid
coronavirus
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PCT/CN2022/136551
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French (fr)
Chinese (zh)
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林金钟
卢静
谭舒丹
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复旦大学
上海蓝鹊生物医药有限公司
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    • C07K14/005Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from viruses
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    • A61K9/127Liposomes
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    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/80Vectors or expression systems specially adapted for eukaryotic hosts for fungi
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    • C12N2770/00011Details
    • C12N2770/20011Coronaviridae
    • C12N2770/20022New viral proteins or individual genes, new structural or functional aspects of known viral proteins or genes
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    • C12N2770/00011Details
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    • C12N2770/20034Use of virus or viral component as vaccine, e.g. live-attenuated or inactivated virus, VLP, viral protein
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    • C12N2800/00Nucleic acids vectors
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    • YGENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
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Definitions

  • This application relates to the field of biomedicine, specifically to a coronavirus S protein variant and its application in preparing vaccines.
  • Coronavirus is a type of enveloped single-stranded positive-sense RNA virus with a wide host range. Humans and various animals are generally susceptible to it and are associated with many diseases.
  • Known coronaviruses include HCoV-OC43, HCoV-229E, HCoV-NL63, HCoV-HKU1, SARS-CoV and/or MERS-CoV.
  • SARS-CoV-2 virus GenBank accession: MN908947
  • coronavirus surface spike protein antigen For the coronavirus surface spike protein antigen (S protein), we have mainly developed recombinant protein vaccines, mRNA vaccines, DNA vaccines, non-replicating viral vector vaccines, replicating viral vector vaccines, peptide vaccines, virus-like particle vaccines, and attenuated vaccines. and inactivated vaccines.
  • S protein coronavirus surface spike protein antigen
  • problems such as low cell transfection rate, low expression efficiency, weak stimulated immune response, and high clinical dosage.
  • it leads to high production costs, high medication costs, and heavy patient burden.
  • high-dose medication makes Introducing more impurities may lead to increased toxic and side effects, thereby increasing clinical risks. Therefore, there is an urgent need to prepare new vaccines.
  • the present application provides a coronavirus S protein variant, and nucleic acid molecules encoding it (including DNA and/or RNA), which can stimulate the body to produce an immune response.
  • the S protein variant of the present application has a higher expression level, and when used to stimulate an immune response, it can produce higher total antibodies, while also having protective antibodies/neutralizing antibodies.
  • the S protein variant and its nucleic acid molecule of the present application can be prepared as a vaccine.
  • mRNA encoding an S protein variant and lipid nanoparticles containing it can be prepared as a vaccine.
  • the vaccine of the present application can greatly improve the immune response, reduce the dosage and reduce side effects.
  • the present application provides an S protein variant that does not contain a complete cytoplasmic tail domain compared with the S protein of wild-type coronavirus.
  • the S protein variant comprises a truncated cytoplasmic tail domain compared to the S protein of a wild-type coronavirus.
  • the S protein variant has 18-20 amino acids truncated at the C-terminus compared to the S protein of wild-type coronavirus.
  • the S protein variant is truncated by 18 amino acids at the C-terminus compared to the S protein of wild-type coronavirus.
  • the S protein variant does not comprise a cytoplasmic tail domain compared to the S protein of wild-type coronavirus.
  • the S protein variant does not comprise a transmembrane domain compared to the S protein of wild-type coronavirus.
  • the S protein variant has 22-64 amino acids truncated at the C-terminus compared to the S protein of wild-type coronavirus.
  • the coronavirus is a MERS coronavirus and/or a SARS-CoV-like virus.
  • the coronavirus is SARS-CoV-2 virus.
  • the cytoplasmic tail domain of the S protein of the wild-type coronavirus comprises the amino acid sequence shown in any one of SEQ ID NO: 48, 49, 86 and 87.
  • the transmembrane domain of the S protein of the wild-type coronavirus comprises the amino acid sequence shown in any one of SEQ ID NO: 50, 51, 88 and 89.
  • the S protein of the wild-type coronavirus comprises the amino acid sequence shown in any one of SEQ ID NO: 5, 34 and 44.
  • the S protein variant comprises any one of SEQ ID NOs: 8, 21, 24, 27, 30, 33, 35, 38, 41, 45, 59, 61 and 94. Amino acid sequence.
  • the S protein variant comprises the amino acid sequence set forth in SEQ ID NO:8.
  • the S protein variant further includes a signal peptide, and the signal peptide is located at the N-terminus of the S protein variant.
  • the signal peptide comprises the amino acid sequence set forth in any one of SEQ ID NOs: 1, 2, and 68.
  • the present application provides an isolated nucleic acid molecule comprising a polynucleotide encoding an S protein variant described herein.
  • the nucleic acid molecule is DNA.
  • the nucleic acid molecule comprises SEQ ID NO: 6, 9-19, 22, 25, 28, 31, 36, 39, 42, 46, 60, 62, 63, 71, 72, 74, The nucleotide sequence of any one of 76, 78, 80, 82, 84, 95, 96 and 97.
  • the nucleic acid molecule is mRNA.
  • the nucleic acid molecule comprises a modification at one or more positions selected from the group consisting of: a 5' cap, a 5' untranslated region, an open reading frame, a 3' untranslated region, and a 3' polygon glycosides.
  • the nucleic acid molecule comprises at least one modified nucleotide.
  • the nucleic acid molecule is codon optimized.
  • the nucleic acid molecule comprises SEQ ID NOs: 7, 20, 23, 26, 29, 32, 37, 40, 43, 47, 73, 75, 77, 79, 81, 83, and 85
  • the present application provides vectors comprising the nucleic acid molecules described in the present application.
  • the application provides cells comprising said nucleic acid molecule, and/or said vector.
  • the present application provides a method for preparing the S protein variant described in the present application, the method comprising culturing the cell under conditions such that the S protein variant is expressed.
  • the present application provides a composition comprising (1) an mRNA encoding an S protein variant described herein, and (2) a delivery vector.
  • the mRNA comprises modifications at one or more positions selected from the group consisting of: a 5' cap, a 5' untranslated region, an open reading frame, a 3' untranslated region, and a poly A tail.
  • the mRNA includes at least one modified nucleotide.
  • the mRNA comprises a modified nucleotide that is pseudouridine ( ⁇ ).
  • the mRNA is codon optimized.
  • the mRNA comprises as in SEQ ID NO: 7, 20, 23, 26, 29, 32, 37, 40, 43, 47, 73, 75, 77, 79, 81, 83 and 85
  • the S protein variant is truncated by 18 amino acids at the C-terminus compared to the S protein of a wild-type coronavirus (e.g., SARS CoV-2 virus).
  • a wild-type coronavirus e.g., SARS CoV-2 virus
  • the mRNA comprises a nucleotide sequence set forth in SEQ ID NO: 7 or 67.
  • the delivery vehicle includes liposomes.
  • the delivery vehicle includes lipid nanoparticles (LNP).
  • LNP lipid nanoparticles
  • the delivery vehicle includes a cationic lipid.
  • the molar ratio of the cationic lipid in the delivery vehicle is from about 45% to about 55%.
  • the cationic lipid includes SM102 and/or Dlin-MC3-DMA.
  • the cationic lipid may be SM102.
  • the chemical structural formula of SM102 can be:
  • the cationic lipid can be Dlin-MC3-DMA.
  • the chemical structural formula of Dlin-MC3-DMA can be:
  • the delivery vehicle includes non-cationic lipids.
  • the noncationic lipids include phospholipids and/or lipid conjugates.
  • the phospholipid includes distearoylphosphatidylcholine (DSPC).
  • DSPC distearoylphosphatidylcholine
  • the molar ratio of the phospholipids is from about 35% to about 40%.
  • the lipid conjugates comprise polyethylene glycol modified lipid molecules.
  • the molar ratio of the lipid conjugate is from about 1% to about 2%.
  • the polyethylene glycol modified lipid molecule includes DMG-PEG2000.
  • the delivery vehicle includes cholesterol.
  • the molar ratio of cholesterol is from about 8% to about 12%.
  • the delivery vehicle comprises cationic lipids, cholesterol, phospholipids and lipid conjugates, and the mass ratio of the cationic lipids, cholesterol, phospholipids and lipid conjugates is 50:10: 38.5:1.5.
  • the delivery vehicle includes SM102, cholesterol, DSPC and DMG-PEG2000, and the mass ratio of SM102, cholesterol, DSPC and DMG-PEG2000 is 50:10:38.5:1.5.
  • the mRNA is encapsulated in the delivery vector.
  • the present application provides a pharmaceutical composition
  • a pharmaceutical composition comprising the S protein variant of the present application, the nucleic acid molecule, the vector, the cell and/or the composition, and optionally a pharmaceutically acceptable carrier.
  • the present application provides a vaccine comprising the S protein variant, the nucleic acid molecule, the vector, the cell, the composition and/or the pharmaceutical composition of the present application, and Pharmaceutically acceptable adjuvants.
  • the vaccine is a protein vaccine.
  • the vaccine is a nucleic acid vaccine.
  • the vaccine is a DNA vaccine.
  • the vaccine is an mRNA vaccine.
  • the present application provides a kit comprising the S protein variant of the present application, the nucleic acid molecule, the vector, the cell, the compound, the pharmaceutical composition and/or or said vaccine.
  • the present application provides the S protein variant, the nucleic acid molecule, the vector, the cell, the composition, the pharmaceutical composition and/or the vaccine described in the present application in the preparation of medicines.
  • the medicine is used to alleviate, prevent and/or treat diseases caused by coronavirus.
  • the disease or condition is novel coronavirus pneumonia (COVID-19) and/or severe acute respiratory syndrome (SARS).
  • COVID-19 novel coronavirus pneumonia
  • SARS severe acute respiratory syndrome
  • the present application provides methods for alleviating, preventing and/or treating diseases or conditions caused by coronavirus, the method comprising administering the S protein variant, the nucleic acid molecule described in the present application to a subject in need. , the vector, the cell, the composition, the pharmaceutical composition and/or the vaccine.
  • the disease or condition is novel coronavirus pneumonia (COVID-19) and/or severe acute respiratory syndrome (SARS).
  • COVID-19 novel coronavirus pneumonia
  • SARS severe acute respiratory syndrome
  • the present application provides a method for producing antibodies against coronavirus, the method comprising administering the S protein variant, the nucleic acid molecule, the vector, the cell, the composition, the pharmaceutical composition and/or the vaccine.
  • the application provides a method of activating immunity, the method comprising administering the S protein variant, the nucleic acid molecule, the vector, the cell, the composition, the pharmaceutical composition and/or or said vaccine.
  • Figure 1A shows the in vitro expression results of 293T cells transfected with the mRNA of the S protein variant described in this application.
  • Figure 1B shows the in vitro expression results of cells transfected with the mRNA expressing the S protein of SARS virus described in this application.
  • Figure 1C shows the results of Western Blot detection of protein expression after the mRNA of the S protein variant described in the present application was transfected with liposomes into 293A cells, where, S: wild-type S protein mRNA; SDC60 Nat: band Nat (original virus) signal peptide, codon-optimized wild-type S protein mRNA (codon sequence code SDC60, in which the GC content in the sequence is 60%); SDC60 Alb: SDC60 codon with Alb (serum albumin) signal peptide The sequence of S protein mRNA; FL: full-length S protein; DC18: S protein mutant with 18 amino acids truncated at the C terminus; 2P: S protein mutation containing 2 proline (Proline) sequence mutations (K986P and V987P) body.
  • S wild-type S protein mRNA
  • SDC60 Nat band Nat (original virus) signal peptide, codon-optimized wild-type S protein mRNA (codon sequence code SDC60, in which the
  • Figure 2 shows a schematic diagram of immunizing mice using lipid nanoparticles of the present application.
  • Figure 3 shows the S protein-binding antibody titers in the first week after the second immunization of the mRNA vaccine.
  • S wild-type S protein mRNA
  • SDC60 Alb-2P with Alb signal peptide and containing 2 proline mutations (K986P , V987P), S protein mRNA of SDC60 codon sequence
  • SDC60 Alb-DC18 with Alb signal peptide, S protein mRNA with 18 amino acids truncated at the C-terminus based on the SDC60 codon sequence.
  • the term "delivery vector” generally refers to a transfer vehicle capable of delivering an agent (eg, mRNA) to a target cell.
  • Delivery vehicles can deliver agents (eg, mRNA) to specific cell subtypes. For example, by means of inherent characteristics of the delivery vehicle or by means of a moiety coupled to, contained within (or a moiety bound to the carrier) such that the moiety and the delivery vehicle are maintained together, thereby rendering the moiety sufficient to target the target.
  • the delivery vehicle may also increase the in vivo half-life of the agent to be delivered (eg, mRNA) and/or the bioavailability of the agent to be delivered.
  • Delivery vectors may include viral vectors, virus-like particles, polycationic vectors, peptide vectors, liposomes, and/or hybrid vectors.
  • the target cell is a hepatocyte
  • the delivery vector has properties (e.g., size, charge, and/or pH) that are effective in delivering the delivery vector and/or the molecule entrapped therein (e.g., mRNA) to the target. cells, reduce immune clearance and/or promote retention in that target cell.
  • polynucleotide generally includes DNA molecules (eg, cDNA or genomic DNA), RNA molecules (eg, mRNA), nucleotide analogs (eg, peptide nucleic acids, and non-naturally occurring nucleotide analogs). ), and hybrids thereof. Nucleic acid molecules can be single-stranded or double-stranded.
  • isolated nucleic acid molecule generally refers to a single- or double-stranded polymer or analog thereof of deoxyribonucleotide or ribonucleotide bases, read from the 5' to the 3' end, which has been separated from at least about 50% of the polypeptides, peptides, lipids, carbohydrates, polynucleotides or other materials that are naturally found with the nucleic acid molecules when the total nucleic acid is isolated from the source cell.
  • an isolated nucleic acid molecule is substantially free of any other contaminating nucleic acid molecules or other molecules found in the nucleic acid's natural environment that could interfere with its use or its therapeutic, diagnostic, prophylactic, or research uses.
  • mRNA generally refers to an RNA transcript that has been processed to remove introns and capable of being translated into a polypeptide.
  • mRNA usually includes a 5' cap, a 5' untranslated region (5'UTR), a coding region (also known as an open reading frame), a 3' untranslated region (3'UTR), and a poly(A) tail.
  • the term "modification" when applied to a nucleic acid generally means that the nucleic acid has a different nucleotide molecule, a different nucleotide sequence, compared to the corresponding wild type, consisting of Different bond compositions and/or the incorporation of unnatural moieties into their structure.
  • the modification may include modification of a nucleotide, for example, the nucleotide may include a modified base, sugar, or phosphate group.
  • the modifications may include polypeptides or proteins with different nucleotide sequences but encoding the same amino acid sequence, or the same function.
  • the modification may be chemical modification and/or biological modification.
  • “Chemical modification” may include modifications that introduce chemicals different from those found in wild-type or naturally occurring nucleic acids, e.g., covalent modifications, e.g., the introduction of modified nucleotides (e.g., nucleotide analogs , or introduce side groups not naturally found in these nucleic acid molecules).
  • modified nucleotide generally refers to units in nucleic acid polymers that contain modified bases, sugars, or phosphate groups, or that incorporate non-natural moieties into their structure.
  • transmembrane domain generally refers to the region of a protein sequence that spans the cell membrane.
  • the term "codon optimization" when applied to nucleic acids generally means the replacement of one, at least one, of the parent polypeptide-encoding nucleic acid with a codon encoding the same amino acid residue that has a different relative frequency of use in the cell. , or a nucleic acid encoding a polypeptide in which one or more codons have been modified to have improved expression in a cell, such as a mammalian cell or a bacterial cell.
  • signal peptide generally refers to a propeptide present as an N-terminal peptide on the precursor form of a protein.
  • the function of the signal peptide is to facilitate the translocation of the expressed polypeptide to the endoplasmic reticulum.
  • the signal peptide is usually cleaved during this process.
  • a signal peptide may be heterologous or homologous to the organism used to produce the polypeptide.
  • the term "pharmaceutical composition” generally refers to a preparation in a form that is effective to allow the biological activity of the active ingredient (e.g., S protein variant, nucleic acid molecule of the present application), and which does not contain ingredients that are harmful to the preparation. Additional ingredients that have unacceptable toxicity to the subject are to be administered. These preparations can be sterile.
  • S protein which may also be called “Spike protein” or “Spike protein” generally refers to the membrane protein on the surface of coronavirus, which can form protruding homotrimers on the surface of the virus.
  • the term may also include glycosylated forms of S protein.
  • S protein usually contains two functional subunits, S1 and S2. The S1 subunit is responsible for binding to host cell receptors, and the S2 subunit is responsible for the fusion of viral membranes and cell membranes. The S protein can mediate coronavirus entry into host cells. Different coronaviruses use different domains within the S1 subunit to recognize attachment receptors on the surface of target cells and enter target cells through the receptors.
  • SARS-CoV and/or SARS-CoV-2 it can enter target cells through direct interaction between domain B of the S1 subunit of the S protein and angiotensin-converting enzyme 2 (ACE2).
  • ACE2 angiotensin-converting enzyme 2
  • virus entry into the host requires priming of the S protein, which requires cleavage of the S protein at the S1/S2 and S2' sites by the host's protease, and the S2 subunit drives viral membrane fusion.
  • the S1 subunit contains the N-terminal domain and the receptor binding domain (RBD), and the S2 subunit contains the fusion peptide (FP), heptapeptide repeat 1 (HR1), heptapeptide repeat 2 (HR2), and the transmembrane domain (TM). domain) and cytoplasmic tail domain.
  • S protein encompasses S protein of any viral origin, for example, MERS CoV, SARS-CoV and/or SARS-CoV-2.
  • the exemplary amino acid sequence of the S protein of SARS-CoV-2 can be found in the NCBI database accession number YP_009724390.1.
  • the exemplary amino acid sequence of the S protein of SARS-CoV can be found in the NCBI database accession number YP009825051.1.
  • the amino acid sequence of the exemplary S protein of MERS-CoV can be found in the NCBI database accession number NC019843.
  • S protein of wild-type coronavirus generally refers to the S protein of a coronavirus that contains the complete sequence of the cytoplasmic tail domain and/or the transmembrane domain.
  • the S protein of wild-type coronavirus can be the S protein of the full-length sequence of coronavirus obtained from nature.
  • the full-length amino acid sequence of the exemplary S protein of SARS-CoV-2 can be found in the NCBI database accession number YP_009724390.1 or the Uniprot database accession number PODTC2.
  • the S protein of wild-type SARS-CoV-2 can contain 1273 amino acids (aa), from the N-terminus to the C-terminus, usually including a 13aa signal peptide in sequence, followed by the S1 subunit (amino acid residues 14-685) and S2 Subunit (amino acid residues 686-1273). Within the S1 subunit, it contains the N-terminal domain (amino acid residues 14-305) and a receptor binding domain (RBD; amino acid residues 319-541) from the N terminus to the C terminus.
  • S2 subunit From N-terminus to C-terminus, it contains fusion peptide (FP; amino acid residues 788-806), heptapeptide repeat sequences 1 and 2 (HR1; amino acid residues 912-984 and HR2; amino acid residues 1163-1213) , transmembrane domain (TMD; amino acid residues 1213-1237) and cytoplasmic tail domain (cytoplasmic tail; amino acid residues 1237-1273).
  • FP fusion peptide
  • HR1 amino acid residues 912-984 and HR2
  • TMD transmembrane domain
  • cytoplasmic tail domain cytoplasmic tail
  • the full-length amino acid sequence of the exemplary SARS-CoV S protein can be found in NCBI database accession number YP_009825051.1 or Uniprot database accession number P59594.
  • the wild-type SARS-CoV S protein can contain 1255 amino acids (aa), and its cytoplasmic tail The amino acid residues of the domain are 1217-1255).
  • Position when used herein means the location within the sequence of a protein. Positions can be numbered consecutively or according to a defined format. , for example, K986P or V987P is relative to the wild-type S protein with amino acids K and V at positions 986 and 987 both mutated to P.
  • cytoplasmic tail domain generally refers to the domain of the wild-type S protein that is located inside the cytoplasm.
  • the cytoplasmic tail domain of coronaviruses is usually Cys-rich and palmitoylated.
  • truncated cytoplasmic tail domain generally refers to a cytoplasmic tail domain with an amino acid deletion relative to an intact cytoplasmic tail domain.
  • the term "vaccine” generally refers to an agent or composition containing an active component effective to induce a therapeutic degree of immunity in a subject against a particular pathogen or disease.
  • lipid nanoparticle generally refers to particles that contain multiple (ie, more than one) lipid molecules physically bound to each other (eg, covalently or non-covalently) by intermolecular forces.
  • Lipid nanoparticles can be, for example, microspheres (including unilamellar and multilamellar vesicles, such as liposomes), the dispersed phase in emulsions, micelles or the internal phase in suspensions.
  • Lipid nanoparticles can include one or more lipids (eg, cationic lipids, noncationic lipids, and PEG-modified lipids).
  • the term "liposome” generally refers to a vesicle having an internal space separated from an external medium by a membrane of one or more bilayers.
  • the membrane of the bilayer can be formed by amphipathic molecules, such as synthetic or naturally derived lipids containing spatially separated hydrophilic and hydrophobic domains; as another example, the membrane of the bilayer can be formed by amphiphilic molecules. Polymer and surfactant formation.
  • SARS-CoV-2 generally refers to severe acute respiratory syndrome coronavirus 2, the full English name is Severe Acute Respiratory Syndrome Coronavirus 2.
  • SARS-CoV-2 belongs to the Betacoronavirus subgenus of the Coronaviridae family and the Sarbecovirus subgenus.
  • SARS-CoV-2 is an enveloped, non-segmented, positive-stranded single-stranded RNA virus.
  • SARS-CoV-like generally refers to Severe acute respiratory syndrome-related coronavirus, a species of the genus Betacoronavirus in the family Coronaviridae. SARS-CoV-like viruses may also be called SARS coronavirus or SARS-related coronavirus.
  • SARS-CoV generally refers to SARS coronavirus, that is, severe acute respiratory syndrome coronavirus (full name in English: Severe acute respiratory syndrome coronavirus), which belongs to the genus Betacoronavirus in the family Coronaviridae. (Betacoronavirus) Subgenus Sarbecovirus.
  • novel coronavirus pneumonia generally refers to coronavirus disease 2019 (full English name is coronavirus disease 2019), which is a disease caused by SARS-CoV-2.
  • coronavirus disease 2019 full English name is coronavirus disease 2019
  • SARS severe acute respiratory syndrome
  • SARS-CoV severe acute respiratory syndrome
  • pharmaceutically acceptable adjuvant generally refers to any adjuvant, excipient such as solvents, dispersion media, coatings, isotonic and absorption delaying agents that are compatible with the active ingredient being administered or other pharmaceutical carriers.
  • SM102 generally refers to an ionizable amino lipid that has been combined with other lipids to form lipid nanoparticles.
  • the molecular structure of SM102 can be found in CAS 2089251-47-6.
  • the present application provides an S protein variant, which may not include a complete cytoplasmic tail domain compared with the S protein of wild-type coronavirus.
  • the S protein variant may comprise a truncated cytoplasmic tail domain compared to the S protein of wild-type coronavirus.
  • the S protein variant may not include a cytoplasmic tail domain.
  • the cytoplasmic tail domain of the S protein variant may be deleted at the C-terminus of about 14, about 15, about 16, about 17, or about 18 , about 19 or about 20 amino acids.
  • the cytoplasmic tail domain of the S protein variant may be deleted at the C terminus of about 10, about 20, about 30, about 40, or about 50 or about 60 amino acids.
  • the cytoplasmic tail domain of the S protein variant may be deleted from about 22 to about 64 amino acids at the C terminus. In the present application, compared with the S protein of wild-type coronavirus, the cytoplasmic tail domain of the S protein variant may be deleted from about 22 to about 60 amino acids at the C terminus. In the present application, compared with the S protein of wild-type coronavirus, the cytoplasmic tail domain of the S protein variant may be deleted from about 30 to about 60 amino acids at the C terminus.
  • the cytoplasmic tail domain of the S protein variant may be deleted from about 40 to about 60 amino acids at the C terminus. In the present application, compared with the S protein of wild-type coronavirus, the cytoplasmic tail domain of the S protein variant may be deleted from about 30 to about 40 amino acids at the C terminus. In the present application, compared with the S protein of wild-type coronavirus, the cytoplasmic tail domain of the S protein variant may be deleted from about 20 to about 30 amino acids at the C terminus.
  • the cytoplasmic tail domain of the S protein variant may lack 18-20 amino acids at the C-terminus. In the present application, compared with the S protein of wild-type coronavirus, the cytoplasmic tail domain of the S protein variant may have 18 amino acids deleted at the C-terminus.
  • the S protein variant may not include a transmembrane domain.
  • the S protein variant may not include a complete transmembrane domain.
  • the S protein variant may comprise a truncated transmembrane domain compared to the S protein of wild-type coronavirus.
  • the coronavirus may be MERS coronavirus and/or SARS-CoV-like viruses.
  • the SARS-CoV-like virus may be SARS-CoV or SARS-CoV-2 virus.
  • the coronavirus may be SARS-CoV-2 virus.
  • the cytoplasmic tail domain of the S protein variant may be deleted at the C-terminus of about 14, about 15, about 16, or about 17 , about 18, about 19 or about 20 amino acids.
  • the cytoplasmic tail domain of the S protein variant may be deleted at the C-terminus of about 10, about 20, about 30, or about 40 , about 50 or about 60 amino acids.
  • the cytoplasmic tail domain of the S protein variant may be deleted from about 22 to about 64 amino acids at the C terminus. In the present application, compared with the S protein of wild-type SARS-CoV-2 virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 22 to about 60 amino acids at the C terminus. In the present application, compared with the S protein of wild-type SARS-CoV-2 virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 30 to about 60 amino acids at the C terminus.
  • the cytoplasmic tail domain of the S protein variant may be deleted from about 40 to about 60 amino acids at the C terminus. In the present application, compared with the S protein of wild-type SARS-CoV-2 virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 30 to about 40 amino acids at the C terminus. In the present application, compared with the S protein of wild-type SARS-CoV-2 virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 20 to about 30 amino acids at the C terminus.
  • the cytoplasmic tail domain of the S protein variant may have 18-20 amino acids deleted at the C-terminus. In this application, compared with the S protein of the wild-type SARS-CoV-2 virus, the cytoplasmic tail domain of the S protein variant may have 18 amino acids deleted at the C-terminus.
  • the S protein variant may comprise the amino acid sequence shown in any one of SEQ ID NO: 8, 21, 24, 27, 30, 33, 38, 41, 45, 59 and 61.
  • the S protein variant may comprise the amino acid sequence shown in SEQ ID NO:8.
  • the coronavirus may be SARS-CoV virus.
  • the cytoplasmic tail domain of the S protein variant may be deleted at the C terminus of about 14, about 15, about 16, about 17, About 18, about 19 or about 20 amino acids.
  • the cytoplasmic tail domain of the S protein variant may be deleted at the C-terminus of about 10, about 20, about 30, about 40, About 50 or about 60 amino acids.
  • the cytoplasmic tail domain of the S protein variant may be deleted from about 22 to about 64 amino acids at the C terminus. In the present application, compared with the S protein of wild-type SARS-CoV virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 22 to about 60 amino acids at the C terminus. In the present application, compared with the S protein of wild-type SARS-CoV virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 30 to about 60 amino acids at the C terminus.
  • the cytoplasmic tail domain of the S protein variant may be deleted from about 40 to about 60 amino acids at the C terminus. In the present application, compared with the S protein of wild-type SARS-CoV virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 30 to about 40 amino acids at the C terminus. In the present application, compared with the S protein of wild-type SARS-CoV virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 20 to about 30 amino acids at the C terminus.
  • the cytoplasmic tail domain of the S protein variant may have 18-20 amino acids deleted at the C terminus. In the present application, compared with the S protein of the wild-type SARS-CoV virus, the cytoplasmic tail domain of the S protein variant may have 18 amino acids deleted at the C-terminus.
  • the S protein variant may comprise the amino acid sequence shown in SEQ ID NO: 35.
  • the coronavirus may be MERS-CoV virus.
  • the cytoplasmic tail domain of the S protein variant may be deleted at the C terminus of about 14, about 15, about 16, about 17, About 18, about 19 or about 20 amino acids.
  • the cytoplasmic tail domain of the S protein variant may be deleted at the C terminus of about 10, about 20, about 30, about 40, About 50 or about 60 amino acids.
  • the cytoplasmic tail domain of the S protein variant may be deleted from about 22 to about 64 amino acids at the C terminus. In the present application, compared with the S protein of wild-type MERS-CoV virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 22 to about 60 amino acids at the C terminus. In the present application, compared with the S protein of wild-type MERS-CoV virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 30 to about 60 amino acids at the C terminus.
  • the cytoplasmic tail domain of the S protein variant may be deleted from about 40 to about 60 amino acids at the C terminus. In the present application, compared with the S protein of wild-type MERS-CoV virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 30 to about 40 amino acids at the C terminus. In the present application, compared with the S protein of wild-type MERS-CoV virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 20 to about 30 amino acids at the C terminus.
  • the cytoplasmic tail domain of the S protein variant may have 18-20 amino acids deleted at the C terminus. In the present application, compared with the S protein of the wild-type MERS-CoV virus, the cytoplasmic tail domain of the S protein variant may have 18 amino acids deleted at the C-terminus.
  • the S protein variant may comprise the amino acid sequence shown in SEQ ID NO: 45.
  • the S protein variant may include a signal peptide, and the signal peptide is located at the N-terminus of the S protein variant.
  • the signal peptide may comprise the amino acid sequence shown in SEQ ID NO: 1 or 2.
  • the application provides an isolated nucleic acid molecule, which may comprise a polynucleotide encoding the S protein variant.
  • the nucleic acid molecule may be DNA.
  • the DNA may comprise the nucleotide sequence shown in any one of SEQ ID NOs: 6, 9-19, 22, 25, 28, 31, 36, 39, 42, 46, 60, 62 and 63.
  • the DNA may comprise SEQ ID NOs: 6, 9-19, 22, 25, 28, 31, 36, 39, 42, 46, 60, 62, 63, 71, 72, 74, 76 , 78, 80, 82, 84, 95, 96 and 97 have at least 80% (for example, 82%, 85%, 88%, 90%, 95%, 98%, 99% or above) sequence identity.
  • the DNA may comprise the nucleotide sequence shown in any one of SEQ ID Nos: 6, 9-19, 22, 25, 28 and 31.
  • the DNA may comprise the nucleotide sequence described in any one of SEQ ID NOs: 6, 9-18, 60, 62 and 63.
  • the DNA may comprise the nucleotide sequence described in any one of SEQ ID NOs: 71, 72, 74, 76, 78, 80, 82, 84, 95, 96 and 97.
  • the DNA may comprise modifications at the 5' cap. In this application, the DNA may comprise modifications at the 5' untranslated region. In this application, the DNA may comprise modifications at the open reading frame. In this application, the DNA may comprise modifications at the 3' untranslated region. In this application, the DNA may comprise modifications at the 3' poly(A). In this application, the DNA contains at least one modified nucleotide.
  • the DNA may be codon optimized.
  • the DNA may comprise the nucleotide sequence described in any one of SEQ ID NOs: 9-18.
  • the nucleic acid molecule may be RNA.
  • the nucleic acid molecule may be mRNA.
  • the mRNA may include a 5' cap, a 5' untranslated region (5' UTR), an open reading frame, a 3' untranslated region (3' UTR), and a poly A tail.
  • the 5' UTR may comprise the nucleotide sequence shown in SEQ ID NO: 64.
  • the 5' UTR may comprise the nucleotide sequence shown in SEQ ID NO: 65.
  • the poly A may comprise the nucleotide sequence shown in SEQ ID NO: 66.
  • the open reading frame may comprise the nucleotide sequence shown in any one of SEQ ID NO: 7, 20, 23, 26, 29, 32, 37, 40, 43 and 47.
  • the open reading frame may contain the same sequence as SEQ ID NO: 7, 20, 23, 26, 29, 32, 37, 40, 43, 47, 73, 75, 77, 79, 81, 83 and 85
  • a nucleotide sequence having a sequence identity of at least 80% e.g., 82%, 85%, 88%, 90%, 95%, 98%, 99% or more.
  • the open reading frame may comprise the nucleotide sequence shown in any one of SEQ ID NO: 7, 20, 23, 26, 29 and 32.
  • the open reading frame may comprise the nucleotide sequence shown in SEQ ID NO:7.
  • the mRNA may include a 5' cap, a 5' untranslated region (5'UTR), an open reading frame, a 3' untranslated region (3'UTR) and a poly A tail; wherein the 5' UTR can Containing the nucleotide sequence shown in SEQ ID NO:64, the 5'UTR may include the nucleotide sequence shown in SEQ ID NO:65, and the poly A may include the nucleoside shown in SEQ ID NO:66 acid sequence, the open reading frame may include the nucleotide sequence shown in SEQ ID NO:7; the mRNA may include the nucleotide sequence shown in SEQ ID NO:67.
  • the RNA may comprise modifications at the 5' cap.
  • the RNA e.g., mRNA
  • the RNA may comprise modifications at the 5' untranslated region.
  • the RNA may comprise modifications at the open reading frame.
  • the RNA e.g., mRNA
  • the RNA may comprise modifications at the 3' untranslated region.
  • the RNA may comprise modifications at the 3' poly(A).
  • the RNA includes at least one modified nucleotide.
  • the mRNA may be codon optimized.
  • the modification of the nucleic acid molecule may be a chemical modification or a biological modification.
  • the nucleic acid molecule may comprise one or more modified nucleobases, nucleosides or nucleotides.
  • Modified nucleic acid molecules can have useful properties compared to an unmodified reference sequence (e.g., a naturally occurring or wild-type nucleic acid molecule), including, for example, enhanced stability, increased intracellular retention, enhanced translation effect and/or reduced immunogenicity. Therefore, the use of modified nucleic acid molecules can increase the efficiency of protein production, improve nucleic acid retention within cells, and reduce immunogenicity.
  • Codon optimization methods for nucleic acid molecules are known in the art and can be used for a variety of purposes: matching codon frequencies in the host organism to ensure correct folding; biasing GC content to increase nucleic acid molecule stability; or Reduce secondary structure; minimize tandem repeat codons that may be repeated or base sequences that may impair gene construction or expression; customize transcription and translation control regions; insert or remove protein transport sequences; remove/add post-translational sequences in encoded proteins Modify sites (such as glycosylation sites); add, remove, or shuffle protein domains; insert or delete restriction sites; modify ribosome binding sites and nucleic acid molecule degradation sites; regulate translation rates to allow individual The domain folds correctly; or, problematic secondary structure within the polynucleotide is reduced or eliminated.
  • nucleic acid molecules e.g., DNA or RNA
  • the present application provides a composition, which may include the mRNA described in the present application and may also include a delivery carrier.
  • the mRNAs of the present application may be formulated in nanoparticles or other delivery vehicles, for example, to avoid their degradation upon delivery to a subject.
  • the mRNA can be encapsulated within nanoparticles.
  • the nanoparticles include lipids.
  • Lipid nanoparticles may include, but are not limited to, liposomes and micelles.
  • the lipid nanoparticles may include cationic and/or ionizable lipids, anionic lipids, neutral lipids, amphipathic lipids, pegylated lipids and/or structural Lipid, or a combination of the above.
  • lipid nanoparticles comprise one or more RNAs described herein, such as mRNA, and for example, mRNA encoding an S protein variant.
  • the delivery vehicle in the compositions described herein may be lipid nanoparticles.
  • the nanolipid particles may comprise one or more (eg 1, 2, 3, 4, 5, 6, 7 or 8) cationic and/or ionizable lipids.
  • “Cationic lipid” generally refers to a lipid that carries any number of net positive charges at a certain pH (eg, physiological pH).
  • the cationic lipids may include, but are not limited to, SM102, 3-(didodecylamino)-N1,N1,4-triacontyl-1-piperazineethylamine (KL10), N1-[2- (Docosylamino)ethyl]-N1,N4,N4-tricosyl-1,4-piperazinediethylamine (KL22), 14,25-tricosyl-15,18 ,21,24-tetraazaoctaporanane (KL25), DLin-DMA, DLin-K-DMA, DLin-KC2-DMA, Octyl-CLinDMA, octyl-CLinDMA (2S), DODAC, DOTMA, DDAB, DOTAP, DOTAP.C1, DC-Choi, DOSPA, DOGS, DODAP, DODMA and DMRIE.
  • the cationic lipid can be SM102, 3-(didodecylamino)-
  • the molar proportion of the cationic lipid in the lipid nanoparticle is about 40-70%, for example, about 40-65%, about 40-60%, about 45-55%, or about 48 -53%. In certain embodiments, the molar proportion of the cationic lipid (eg, SM102) in the lipid nanoparticle is about 50%.
  • the nanolipid particles may comprise one or more (eg 1, 2, 3, 4, 5, 6, 7 or 8) non-cationic lipids.
  • the non-cationic lipids may include anionic lipids.
  • Anionic lipids suitable for lipid nanoparticles of the present application may include phosphatidylglycerol, cardiolipin, diacylphosphatidylserine, diacylphosphatidic acid, N-lauroylphosphatidylethanolamine, N-succinylphosphatidylethanolamine , N-glutarylphosphatidylphosphoethanol group, and other neutral lipids to which anionic groups are attached.
  • the non-cationic lipids may include neutral lipids.
  • Neutral lipids suitable for lipid nanoparticles of the present application may include phospholipids, such as distearoylphosphatidylcholine (DSPC), dioleoylphosphatidylcholine (DOPC), dipalmitoylphosphatidylcholine ( DPPC), dioleoylphosphatidylglycerol (DOPG), dipalmitoylphosphatidylglycerol (DPPG), dioleoylphosphatidylethanolamine (DOPE), palmitoyloleoylphosphatidylcholine (POPC), palmitoyloleoyl- Phosphatidylethanolamine (POPE), dioleoyl-phosphatidylethanolamine 4-(N-maleimidomethyl)-cyclohexane-1-carboxylate (DOPE-mal), dipalmitoylphosphatidylethanolamine (DPPE
  • the molar proportion of the phospholipid in the lipid nanoparticle is about 30-45%, for example, about 33-42%, about 35-40%, or about 38-39%. In certain embodiments, the molar proportion of the phospholipid (eg, DSPC) in the lipid nanoparticle is about 38.5%.
  • the nanolipid particles may comprise lipid conjugates, for example, polyethylene glycol (PEG) modified lipids and derivatized lipids.
  • PEG-modified lipids may include, but are not limited to, polyethylene glycol chains up to 5 kDa in length covalently linked to lipids having alkyl chains of C6-C20 length. The addition of these components can prevent lipid aggregation, increase circulation duration, facilitate delivery of lipid-nucleic acid compositions to target cells, or rapidly release nucleic acids.
  • the polyethylene glycol (PEG) modified lipid molecule can be a PEG-ceramide with a shorter acyl chain (eg, C14 or C18).
  • the nanolipid particles may comprise PEG2000-DMG.
  • the molar proportion of polyethylene glycol (PEG)-modified lipid molecules in the lipid nanoparticles is about 0.5-2%, for example, about 1-2%, about 1.2-1.8%, or About 1.4-1.6%. In certain embodiments, the molar proportion of polyethylene glycol (PEG)-modified lipid molecules (eg, PEG2000-DMG) in the lipid nanoparticle is about 1.5%.
  • the nanolipid particles may also contain cholesterol.
  • the molar proportion of cholesterol in the lipid nanoparticle is about 5-15%, for example, about 6-14%, about 7-13%, about 8-12%, or about 9-11% %. In certain embodiments, the molar proportion of cholesterol in the lipid nanoparticle can be about 10%.
  • the nanolipid particles may include cationic lipids, cholesterol, phospholipids, and polyethylene glycol-modified lipid molecules.
  • the molar ratio of the cationic lipid, cholesterol, phospholipid and polyethylene glycol-modified lipid molecules may be 45-55:5-15:35-45:0.5-2.
  • the molar ratio of the cationic lipid, cholesterol, phospholipid, and polyethylene glycol-modified lipid molecules may be 50:10:38.5:1.5.
  • the application provides a vector comprising the nucleic acid molecule.
  • the vector may be a viral vector, such as an adenoviral vector, an adeno-associated viral vector, and/or a lentiviral vector.
  • the application provides cells comprising said nucleic acid molecule, and/or said vector.
  • the cell may be a prokaryotic cell, for example, E. coli.
  • the cells may be eukaryotic cells such as yeast cells, insect cells, plant cells and animal cells.
  • the cells may be mammalian cells, such as mouse cells, human cells, etc.
  • the present application provides a method of preparing the S protein variant, the method comprising culturing the cell under conditions such that the S protein variant is expressed.
  • the application provides a pharmaceutical composition
  • a pharmaceutical composition comprising the S protein variant, the nucleic acid molecule, the vector, the cell and/or the composition, and optionally a pharmaceutical acceptable carrier.
  • the present application provides a vaccine comprising the S protein variant, the nucleic acid molecule, the vector, the cell, the composition and/or the pharmaceutical composition, and a pharmaceutical Acceptable adjuvants.
  • the vaccine may be a protein vaccine, which may comprise the S protein variant.
  • the vaccine may be a nucleic acid vaccine, which may include the nucleic acid molecule.
  • the vaccine may be a DNA vaccine.
  • the vaccine may be an mRNA vaccine.
  • the present application provides a kit comprising the S protein variant, the nucleic acid molecule, the vector, the cell, the compound, the pharmaceutical composition and/or the Describe vaccines.
  • the application provides the use of the S protein variant, the nucleic acid molecule, the vector, the cell, the composition, the pharmaceutical composition and/or the vaccine in the preparation of medicines , the drug is used to alleviate, prevent and/or treat diseases caused by coronavirus.
  • the present application provides a method of alleviating, preventing and/or treating a disease or condition caused by coronavirus, the method comprising administering the S protein variant, the nucleic acid molecule, the the vector, the cell, the composition, the pharmaceutical composition and/or the vaccine.
  • the disease or condition may be novel coronavirus pneumonia (COVID-19) and/or severe acute respiratory syndrome (SARS).
  • COVID-19 novel coronavirus pneumonia
  • SARS severe acute respiratory syndrome
  • the present application provides a method for producing antibodies against coronavirus, the method comprising administering the S protein variant, the nucleic acid molecule, the vector, the cell, the composition, the drug compositions and/or said vaccines.
  • the application provides a method of activating immunity, the method comprising administering the S protein variant, the nucleic acid molecule, the vector, the cell, the composition, the pharmaceutical composition and/or or said vaccine.
  • the S protein variant, the nucleic acid molecule, the vector, the cell, the composition, the pharmaceutical composition and/or the vaccine can be administered once or multiple times. or continuous administration, and both are safe. After the initial administration, subsequent administration of the composition and/or pharmaceutical composition may shorten the onset of action.
  • the S protein variant, the nucleic acid molecule, the vector, the cell, the composition, the pharmaceutical composition and/or the vaccine can be combined with other active substances or treatment/prevention Ingredients are co-administered.
  • the S protein variant, the nucleic acid molecule, the vector, the cell, the composition, the pharmaceutical composition and/or the vaccine can be used in other active substances or treatments/preventions. before or after the ingredients are applied.
  • S protein variant compared with the S protein of wild-type coronavirus, it does not contain a complete cytoplasmic tail domain.
  • S protein variant according to embodiment 1 which contains a truncated cytoplasmic tail domain compared with the S protein of wild-type coronavirus.
  • the S protein variant according to any one of embodiments 1-2 which has 18-20 amino acids truncated at the C-terminus compared with the S protein of wild-type coronavirus.
  • S protein variant according to embodiment 3 which has 18 amino acids truncated at the C-terminus compared with the S protein of wild-type coronavirus.
  • S protein variant according to embodiment 1 which does not include a cytoplasmic tail domain compared with the S protein of wild-type coronavirus.
  • coronavirus is a MERS coronavirus and/or a SARS-CoV-like virus.
  • transmembrane domain of the S protein of the wild-type coronavirus comprises the amino acid shown in any one of SEQ ID NO: 50-51 sequence.
  • S protein variant according to any one of embodiments 1-11, wherein the S protein of the wild-type coronavirus comprises the amino acid sequence shown in any one of SEQ ID NO: 5, 34 and 44.
  • S protein variant according to any one of embodiments 1-12 comprising SEQ ID NO:8, 21, 24, 27, 30, 33, 35, 38, 41, 45, 59 and 61
  • amino acid sequence shown in any one comprising SEQ ID NO:8, 21, 24, 27, 30, 33, 35, 38, 41, 45, 59 and 61
  • An isolated nucleic acid molecule comprising a polynucleotide encoding the S protein variant of any one of embodiments 1-16.
  • nucleic acid molecule of embodiment 17, which is DNA is DNA.
  • nucleic acid molecule according to any one of embodiments 17-18, comprising SEQ ID NOs: 6, 9-19, 22, 25, 28, 31, 36, 39, 42, 46, 60, 62 and The nucleotide sequence described in any one of 63.
  • nucleic acid molecule of embodiment 17, which is mRNA is mRNA.
  • nucleic acid molecule of embodiment 20 comprising modifications at one or more positions selected from the group consisting of: 5' cap, 5' untranslated region, open reading frame, 3' untranslated region, and 3' poly(A).
  • nucleic acid molecule of any one of embodiments 20-21 comprising at least one modified nucleotide.
  • nucleic acid molecule according to any one of embodiments 20-23, which comprises SEQ ID NO:7, 20, 23, 26, 29, 32, 37, 40, 43 and 47. Nucleotide sequence.
  • a vector comprising the nucleic acid molecule of any one of embodiments 17-24.
  • a cell comprising the nucleic acid molecule of any one of embodiments 17-24, and/or the vector of embodiment 25.
  • a method for preparing the S protein variant according to any one of embodiments 1-16 comprising culturing under conditions such that the S protein variant according to any one of embodiments 1-16 is expressed.
  • the cell according to embodiment 26 The cell according to embodiment 26.
  • composition comprising (1) an mRNA encoding the S protein variant of any one of embodiments 1-16, and (2) a delivery vector.
  • composition of embodiment 28, wherein the mRNA comprises modifications at one or more positions selected from the group consisting of: 5' cap, 5' untranslated region, open reading frame, 3' untranslated region and poly A tail.
  • composition according to any one of embodiments 28-32, wherein the mRNA comprises any one of SEQ ID NOs: 7, 20, 23, 26, 29, 32, 37, 40, 43 and 47
  • the nucleotide sequence shown in the item is not limited to SEQ ID NOs: 7, 20, 23, 26, 29, 32, 37, 40, 43 and 47.
  • composition according to any one of embodiments 28-32, wherein the mRNA comprises the nucleotide sequence shown in SEQ ID NO:7.
  • LNP lipid nanoparticles
  • composition of embodiment 38, wherein the molar ratio of the cationic lipid in the delivery vehicle is from about 45% to about 55%.
  • composition of embodiment 38 or 39, wherein the cationic lipid comprises SM102 and/or Dlin-MC3.
  • composition of any one of embodiments 28-40, wherein the delivery vehicle comprises a non-cationic lipid comprises a non-cationic lipid.
  • composition of embodiment 41, wherein the non-cationic lipids comprise phospholipids and/or lipid conjugates.
  • composition of embodiment 42, wherein the phospholipid comprises distearoylphosphatidylcholine (DSPC).
  • DSPC distearoylphosphatidylcholine
  • composition of embodiment 42 or 43, in the delivery vehicle, wherein the molar ratio of the phospholipids is from about 35% to about 40%.
  • composition of any one of embodiments 42-44, wherein the lipid conjugate comprises a polyethylene glycol modified lipid molecule.
  • composition of any one of embodiments 45-46, wherein the polyethylene glycol modified lipid molecule comprises DMPE-PEG2000.
  • composition of embodiment 48, wherein the molar ratio of cholesterol in the delivery vehicle is from about 8% to about 12%.
  • the mass ratio of the conjugate is 50:10:38.5:1.5.
  • a pharmaceutical composition comprising the S protein variant according to any one of embodiments 1-16, the nucleic acid molecule according to any one of embodiments 17-24, the vector according to embodiment 25, and the embodiment 26 and/or the composition of any one of embodiments 28-52, and optionally a pharmaceutically acceptable carrier.
  • a vaccine comprising the S protein variant according to any one of embodiments 1-16, the nucleic acid molecule according to any one of embodiments 17-24, the vector according to embodiment 25, and the vector according to embodiment 26.
  • the vaccine of embodiment 54 which is a protein vaccine.
  • the vaccine according to embodiment 54 which is a nucleic acid vaccine.
  • the vaccine of embodiment 56 which is a DNA vaccine.
  • the vaccine of embodiment 56 which is an mRNA vaccine.
  • Kit comprising the S protein variant according to any one of embodiments 1-16, the nucleic acid molecule according to any one of embodiments 17-24, the vector according to embodiment 25, and the vector according to embodiment 26.
  • 61 Use according to embodiment 60, wherein the disease or condition is novel coronavirus pneumonia (COVID-19) and/or severe acute respiratory syndrome (SARS).
  • COVID-19 novel coronavirus pneumonia
  • SARS severe acute respiratory syndrome
  • a method of alleviating, preventing and/or treating a disease or condition caused by coronavirus comprising administering to a subject in need thereof the S protein variant of any one of embodiments 1-16, embodiment The nucleic acid molecule described in any one of 17-24, the vector described in embodiment 25, the cell described in embodiment 26, the composition described in any one of embodiments 28-52, the vector described in embodiment 53 Pharmaceutical compositions and/or vaccines according to any of embodiments 54-58.
  • invention 62 Use according to embodiment 62, wherein the disease or condition is novel coronavirus pneumonia (COVID-19) and/or severe acute respiratory syndrome (SARS).
  • COVID-19 novel coronavirus pneumonia
  • SARS severe acute respiratory syndrome
  • a method of producing antibodies against coronavirus comprising administering the S protein variant described in any one of embodiments 1-16, the nucleic acid molecule described in any one of embodiments 17-24, or the method described in embodiment 25
  • a method of activating immunity comprising administering the S protein variant of any one of embodiments 1-16, the nucleic acid molecule of any one of embodiments 17-24, the vector of embodiment 25, The cell of embodiment 26, the composition of any one of embodiments 28-52, the pharmaceutical composition of embodiment 53, and/or the vaccine of any one of embodiments 54-58.
  • S protein variant compared with the S protein of wild-type coronavirus, it does not contain a complete cytoplasmic tail domain.
  • S protein variant according to embodiment 1 which contains a truncated cytoplasmic tail domain compared with the S protein of wild-type coronavirus.
  • the S protein variant according to any one of embodiments 1-2 which has 18-20 amino acids truncated at the C-terminus compared with the S protein of wild-type coronavirus.
  • S protein variant according to embodiment 3 which has 18 amino acids truncated at the C-terminus compared with the S protein of wild-type coronavirus.
  • S protein variant according to embodiment 1 which does not include a cytoplasmic tail domain compared with the S protein of wild-type coronavirus.
  • coronavirus is a MERS coronavirus and/or a SARS-CoV-like virus.
  • transmembrane domain of the S protein of the wild-type coronavirus comprises the amino acid shown in any one of SEQ ID NO: 50-51 sequence.
  • S protein variant according to any one of embodiments 1-11, wherein the S protein of the wild-type coronavirus comprises the amino acid sequence shown in any one of SEQ ID NO: 5, 34 and 44.
  • S protein variant according to any one of embodiments 1-12 which comprises the amino acid sequence shown in any one of SEQ ID NO: 38, 41 and 59.
  • An isolated nucleic acid molecule comprising a polynucleotide encoding the S protein variant of any one of embodiments 1-16.
  • nucleic acid molecule of embodiment 17, which is DNA is DNA.
  • nucleic acid molecule according to any one of embodiments 17-18, comprising SEQ ID NO: 17, 19, 22, 25, 28, 31, 36, 39, 42, 46, 60, 62 and 63
  • nucleotide sequence of any one comprising SEQ ID NO: 17, 19, 22, 25, 28, 31, 36, 39, 42, 46, 60, 62 and 63
  • nucleic acid molecule of embodiment 17, which is mRNA is mRNA.
  • nucleic acid molecule of embodiment 20 comprising modifications at one or more positions selected from the group consisting of: 5' cap, 5' untranslated region, open reading frame, 3' untranslated region, and 3' poly(A).
  • nucleic acid molecule of any one of embodiments 20-21 comprising at least one modified nucleotide.
  • nucleic acid molecule according to any one of embodiments 20-23, which comprises SEQ ID NO:7, 20, 23, 26, 29, 32, 37, 40, 43 and 47. Nucleotide sequence.
  • a vector comprising the nucleic acid molecule of any one of embodiments 17-24.
  • a cell comprising the nucleic acid molecule of any one of embodiments 17-24, and/or the vector of embodiment 25.
  • a method for preparing the S protein variant according to any one of embodiments 1-16 comprising culturing under conditions such that the S protein variant according to any one of embodiments 1-16 is expressed.
  • the cell according to embodiment 26 The cell according to embodiment 26.
  • composition comprising (1) an mRNA encoding the S protein variant of any one of embodiments 1-16, and (2) a delivery vector.
  • composition of embodiment 28, wherein the mRNA comprises modifications at one or more positions selected from the group consisting of: 5' cap, 5' untranslated region, open reading frame, 3' untranslated region and poly A tail.
  • composition according to any one of embodiments 28-32, wherein the mRNA comprises any one of SEQ ID NOs: 7, 20, 23, 26, 29, 32, 37, 40, 43 and 47
  • the nucleotide sequence shown in the item is not limited to SEQ ID NOs: 7, 20, 23, 26, 29, 32, 37, 40, 43 and 47.
  • composition according to any one of embodiments 28-32, wherein the mRNA comprises the nucleotide sequence shown in SEQ ID NO:7.
  • LNP lipid nanoparticles
  • composition of embodiment 38, wherein the molar ratio of the cationic lipid in the delivery vehicle is from about 45% to about 55%.
  • composition of embodiment 38 or 39, wherein the cationic lipid comprises SM102 and/or Dlin-MC3.
  • composition of any one of embodiments 28-40, wherein the delivery vehicle comprises a non-cationic lipid comprises a non-cationic lipid.
  • composition of embodiment 41, wherein the non-cationic lipids comprise phospholipids and/or lipid conjugates.
  • composition of embodiment 42, wherein the phospholipid comprises distearoylphosphatidylcholine (DSPC).
  • DSPC distearoylphosphatidylcholine
  • composition of embodiment 42 or 43, in the delivery vehicle, wherein the molar ratio of the phospholipids is from about 35% to about 40%.
  • composition of any one of embodiments 42-44, wherein the lipid conjugate comprises a polyethylene glycol modified lipid molecule.
  • composition of any one of embodiments 45-46, wherein the polyethylene glycol modified lipid molecule comprises DMG-PEG2000.
  • composition of embodiment 48, wherein the molar ratio of cholesterol in the delivery vehicle is from about 8% to about 12%.
  • the mass ratio of the conjugate is 50:10:38.5:1.5.
  • a pharmaceutical composition comprising the S protein variant according to any one of embodiments 1-16, the nucleic acid molecule according to any one of embodiments 17-24, the vector according to embodiment 25, and the embodiment 26 and/or the composition of any one of embodiments 28-52, and optionally a pharmaceutically acceptable carrier.
  • a vaccine comprising the S protein variant according to any one of embodiments 1-16, the nucleic acid molecule according to any one of embodiments 17-24, the vector according to embodiment 25, and the vector according to embodiment 26.
  • the vaccine of embodiment 54 which is a protein vaccine.
  • the vaccine according to embodiment 54 which is a nucleic acid vaccine.
  • the vaccine of embodiment 56 which is a DNA vaccine.
  • the vaccine of embodiment 56 which is an mRNA vaccine.
  • Kit comprising the S protein variant according to any one of embodiments 1-16, the nucleic acid molecule according to any one of embodiments 17-24, the vector according to embodiment 25, and the vector according to embodiment 26.
  • 61 Use according to embodiment 60, wherein the disease or condition is novel coronavirus pneumonia (COVID-19) and/or severe acute respiratory syndrome (SARS).
  • COVID-19 novel coronavirus pneumonia
  • SARS severe acute respiratory syndrome
  • a method of alleviating, preventing and/or treating a disease or condition caused by coronavirus comprising administering to a subject in need thereof the S protein variant of any one of embodiments 1-16, embodiment The nucleic acid molecule described in any one of 17-24, the vector described in embodiment 25, the cell described in embodiment 26, the composition described in any one of embodiments 28-52, the vector described in embodiment 53 Pharmaceutical compositions and/or vaccines according to any of embodiments 54-58.
  • invention 62 Use according to embodiment 62, wherein the disease or condition is novel coronavirus pneumonia (COVID-19) and/or severe acute respiratory syndrome (SARS).
  • COVID-19 novel coronavirus pneumonia
  • SARS severe acute respiratory syndrome
  • a method of producing antibodies against coronavirus comprising administering the S protein variant described in any one of embodiments 1-16, the nucleic acid molecule described in any one of embodiments 17-24, or the method described in embodiment 25
  • a method of activating immunity comprising administering the S protein variant of any one of embodiments 1-16, the nucleic acid molecule of any one of embodiments 17-24, the vector of embodiment 25, The cell of embodiment 26, the composition of any one of embodiments 28-52, the pharmaceutical composition of embodiment 53, and/or the vaccine of any one of embodiments 54-58.
  • the mRNA was obtained by in vitro transcription using a linearized plasmid as a template through a one-step capping method.
  • the cap1 cap analog (m7G(5')ppp(5')(2'OMeA)pG (APExBIO Company) was used in the transcription system.
  • SARS-Cov-2 virus S protein containing Alb signal peptide code: SDC60 Alb
  • SARS virus S protein SARS S protein
  • the SARS-Cov-2 virus SDC60 Alb protein has the following variants: full-length protein (FL), full-length protein containing K986P and V987P mutations (2P), and the C-terminus of the full-length protein is truncated by 10, 18, respectively.
  • SARS S protein variants of SARS virus include: full-length protein (FL) and full-length C-terminus truncated by 10 respectively , 18, 40 amino acid proteins (DC10, DC18, DC40).
  • the mRNA of Example 1.1 is ionizable (cationic) at low pH, and coated into nanoparticles with two auxiliary lipids (DSPC and cholesterol) and a pegylated lipid (DMG-PEG2000).
  • An aqueous solution of mRNA was prepared by mixing the mRNA dissolved in ultrapure water 1:1 (v/v) with 100 ⁇ mM citrate buffer, pH 4.0.
  • the ratio of the four lipid components (cationic lipid SM102: cholesterol: DSPC: DMG-PEG2000) was adjusted (50:10:38.5:1.5) and dissolved in ethanol (99.5%) to form a lipid solution.
  • LNP liposome nanoparticles containing mRNA
  • the mRNA prepared in Example 1 was transfected into 293T cells respectively (via the standard operating procedure of ThermoFisher transfection reagent Lipofectamine 2000). The cells were collected after 19 hours, and the total protein amount of the cell lysis sample was detected using the Micro BCA TM protein detection kit. The enzyme-linked immunosorbent assay was then used to determine the S protein content in the cell lysate.
  • the total protein in each well of the ELISA plate that is, the total protein amount of S mRNA transfected with SARS-Cov-2 virus is 10 ⁇ g, and the total protein amount of S mRNA transfected with SARS virus is 10 ⁇ g.
  • the total protein amount was 20 ⁇ g and incubated at room temperature for 2 hours. Wash the plate 5 times with 1 ⁇ PBST (0.05% Tween20), 200 ⁇ L/well, invert the ELISA plate each time and tap to clean. Dilute the detection antibody to the working concentration with 1 ⁇ PBS, mix well, add 100 ⁇ L to each well, and incubate at room temperature for 1 hour.
  • the detection antibody used for SDC60 Alb protein is 40591-MM43, with a working concentration of 0.609 ⁇ g/mL.
  • the detection antibody used for SARS S protein is 40150-MM10, with a working concentration of 1 ⁇ g/mL.
  • the antibodies were purchased from Sino Biological. Wash the plate three times with 1 ⁇ PBST (0.05% Tween20), 200 ⁇ L/well, invert the ELISA plate each time and tap to clean. Dilute Peroxidase AffiniPure Goat Anti-Mouse IgG (H+L) 5000 times with 1 ⁇ PBS, add 100 ⁇ L to each well, and incubate at room temperature for 1 hour.
  • the in vitro expression results of cells transfected with the SARS-Cov-2 S protein variant mRNA of the present application show that for the S protein (SDC60 Alb) of the SARS-Cov-2 virus, the C-terminus is truncated by 10, The expression level of the protein after 18, 20, 40, 60 and 67 amino acids is higher than that of the full-length protein, and the expression level of the full-length protein is the same as the expression level of the protein after the C-terminal truncation of 10, 18 and 40 amino acids. There is a significant difference between them.
  • the in vitro expression results of cells transfected with mRNA expressing the S protein of SARS virus (SARS S) show that for the SARS S protein, the protein expression after the C-terminal truncation of 18 or 40 amino acids is lower than that of the full-length protein.
  • the expression level is high, and there is a significant difference between the expression level of the full-length protein and the protein expression level after C-terminal truncation of 18 or 40 amino acids.
  • the test method is Ordinary one-way ANOVA, *P ⁇ 0.05, **P ⁇ 0.01, ***P ⁇ 0.001, ****P ⁇ 0.0001, ns: not significant.
  • the lipid nanoparticles obtained in Example 2 were transfected into 293A cells respectively. After 24 hours, the cells were collected and Western Blot was used to detect protein expression. The results obtained are shown in Figure 1C. The results showed that for the wild-type S protein, the wild-type S protein with the SDC60 codon, and the wild-type S protein with the SDC60 codon of the Alb signal peptide, the protein expression levels after the C-terminal truncation of 18 amino acids were all higher.
  • the coated lipid nanoparticles expressing the SARS-CoV-2 Spike protein or the mRNA of each mutant were injected intramuscularly (i.m.) into Balb/c mice, specifically The information is shown in Table 2 below, and the mouse immunization schematic is shown in Figure 2. Blood samples were collected on days 1, 14, 28, 42, and 70, and the sera were analyzed in a fluorescent antibody virus neutralization assay, as detailed in the following examples described.
  • the S protein antigen was purchased from Sino Biological, product number 40589-V08B1; the S protein RBD domain was purchased from Novoprotein, product number DRA36. Wash 3 times with PBST (0.05% Tween), 200 ⁇ l/well, invert the ELISA plate each time and tap to clean. Add 100 ⁇ l/well 2% BSA (dissolved in PBST) to block, and incubate at room temperature for 1 hr.
  • Figure 3 shows that the S protein variant mRNA vaccines of the present application can effectively activate the mouse immune system and produce antibodies in the serum, and are highly safe and effective.
  • the mRNA of the S protein variant truncated to 18 amino acids produced the highest antibody titer.

Abstract

Provided is an S protein variant, which does not contain a complete cytoplasmic tail domain compared to the S protein of a wild-type coronavirus. Further provided are a nucleic acid molecule encoding the S protein variant, and the use of the S protein variant and the nucleic acid molecule in the preparation of a vaccine.

Description

一种冠状病毒S蛋白变体及其应用A coronavirus S protein variant and its application 技术领域Technical field
本申请涉及生物医药领域,具体的涉及一种冠状病毒S蛋白变体及其在制备疫苗中的应用。This application relates to the field of biomedicine, specifically to a coronavirus S protein variant and its application in preparing vaccines.
背景技术Background technique
冠状病毒(coronavirus,CoV)是一类有包膜的单股正链RNA病毒,宿主范围广泛,人和多种动物普遍易感,并且与许多疾病有关。已知的冠状病毒包括HCoV-OC43、HCoV-229E、HCoV-NL63、HCoV-HKU1、SARS-CoV和/或MERS-CoV,研究表明,SARS-CoV-2病毒的基因序列(GenBank accession:MN908947)与SARS冠状病毒相比具有超过85%的序列相似度。Coronavirus (CoV) is a type of enveloped single-stranded positive-sense RNA virus with a wide host range. Humans and various animals are generally susceptible to it and are associated with many diseases. Known coronaviruses include HCoV-OC43, HCoV-229E, HCoV-NL63, HCoV-HKU1, SARS-CoV and/or MERS-CoV. Research shows that the genetic sequence of the SARS-CoV-2 virus (GenBank accession: MN908947) It has more than 85% sequence similarity compared with SARS coronavirus.
针对冠状病毒表面刺突蛋白抗原(S蛋白),主要研发了重组蛋白疫苗、mRNA疫苗、DNA疫苗、非复制型病毒载体疫苗、复制性病毒载体疫苗、多肽疫苗、病毒样颗粒疫苗、减毒疫苗和灭活疫苗。但是存在对细胞的转染率低,表达效率低,刺激的免疫应答弱,临床需要的剂量高,一方面导致生产成本高,病人用药费用高,负担重等问题,另一方面高剂量用药使得引入的杂质更多,可能会导致毒副作用的增大,从而增加了临床风险。因此亟待制备新型疫苗。For the coronavirus surface spike protein antigen (S protein), we have mainly developed recombinant protein vaccines, mRNA vaccines, DNA vaccines, non-replicating viral vector vaccines, replicating viral vector vaccines, peptide vaccines, virus-like particle vaccines, and attenuated vaccines. and inactivated vaccines. However, there are problems such as low cell transfection rate, low expression efficiency, weak stimulated immune response, and high clinical dosage. On the one hand, it leads to high production costs, high medication costs, and heavy patient burden. On the other hand, high-dose medication makes Introducing more impurities may lead to increased toxic and side effects, thereby increasing clinical risks. Therefore, there is an urgent need to prepare new vaccines.
发明内容Contents of the invention
本申请提供了一种冠状病毒S蛋白变体,以及编码其的核酸分子(包括DNA和/或RNA),其能够刺激机体产生免疫应答。与野生型冠状病毒的S蛋白相比,本申请的S蛋白变体具有较高的表达量,在用于刺激产生免疫应答时,可产生更高的总抗体,同时保护抗体/中和抗体也有极大的提升。本申请的S蛋白变体及其核酸分子,可以被制备为疫苗。例如,编码S蛋白变体的mRNA及包含其的脂质纳米颗粒可以被制备为疫苗。与野生型冠状病毒的S蛋白的疫苗相比,本申请的疫苗可极大地提高免疫应答,降低施用剂量,减少副作用。The present application provides a coronavirus S protein variant, and nucleic acid molecules encoding it (including DNA and/or RNA), which can stimulate the body to produce an immune response. Compared with the S protein of wild-type coronavirus, the S protein variant of the present application has a higher expression level, and when used to stimulate an immune response, it can produce higher total antibodies, while also having protective antibodies/neutralizing antibodies. A huge improvement. The S protein variant and its nucleic acid molecule of the present application can be prepared as a vaccine. For example, mRNA encoding an S protein variant and lipid nanoparticles containing it can be prepared as a vaccine. Compared with the S protein vaccine of wild-type coronavirus, the vaccine of the present application can greatly improve the immune response, reduce the dosage and reduce side effects.
一方面,本申请提供了一种S蛋白变体,与野生型冠状病毒的S蛋白相比,其不包含完整的细胞质尾巴结构域。In one aspect, the present application provides an S protein variant that does not contain a complete cytoplasmic tail domain compared with the S protein of wild-type coronavirus.
在某些实施方式中,与野生型冠状病毒的S蛋白相比,所述S蛋白变体包含截短的细胞质尾巴结构域。In certain embodiments, the S protein variant comprises a truncated cytoplasmic tail domain compared to the S protein of a wild-type coronavirus.
在某些实施方式中,与野生型冠状病毒的S蛋白相比,所述S蛋白变体在C末端截短了 18-20个氨基酸。In certain embodiments, the S protein variant has 18-20 amino acids truncated at the C-terminus compared to the S protein of wild-type coronavirus.
在某些实施方式中,与野生型冠状病毒的S蛋白相比,所述S蛋白变体在C末端截短了18个氨基酸。In certain embodiments, the S protein variant is truncated by 18 amino acids at the C-terminus compared to the S protein of wild-type coronavirus.
在某些实施方式中,与野生型冠状病毒的S蛋白相比,所述S蛋白变体不包含细胞质尾巴结构域。In certain embodiments, the S protein variant does not comprise a cytoplasmic tail domain compared to the S protein of wild-type coronavirus.
在某些实施方式中,与野生型冠状病毒的S蛋白相比,所述S蛋白变体不包含跨膜域。In certain embodiments, the S protein variant does not comprise a transmembrane domain compared to the S protein of wild-type coronavirus.
在某些实施方式中,与野生型冠状病毒的S蛋白相比,所述S蛋白变体在C末端截短了22-64个氨基酸。In certain embodiments, the S protein variant has 22-64 amino acids truncated at the C-terminus compared to the S protein of wild-type coronavirus.
在某些实施方式中,所述冠状病毒为MERS冠状病毒和/或SARS-CoV类病毒。In certain embodiments, the coronavirus is a MERS coronavirus and/or a SARS-CoV-like virus.
在某些实施方式中,所述冠状病毒为SARS-CoV-2病毒。In certain embodiments, the coronavirus is SARS-CoV-2 virus.
在某些实施方式中,所述野生型冠状病毒的S蛋白的细胞质尾巴结构域包含SEQ ID NO:48、49、86和87中任一项所示的氨基酸序列。In certain embodiments, the cytoplasmic tail domain of the S protein of the wild-type coronavirus comprises the amino acid sequence shown in any one of SEQ ID NO: 48, 49, 86 and 87.
在某些实施方式中,所述野生型冠状病毒的S蛋白的跨膜域包含SEQ ID NO:50、51、88和89中任一项所示的氨基酸序列。In certain embodiments, the transmembrane domain of the S protein of the wild-type coronavirus comprises the amino acid sequence shown in any one of SEQ ID NO: 50, 51, 88 and 89.
在某些实施方式中,所述野生型冠状病毒的S蛋白包含SEQ ID NO:5、34和44中任一项所示的氨基酸序列。In certain embodiments, the S protein of the wild-type coronavirus comprises the amino acid sequence shown in any one of SEQ ID NO: 5, 34 and 44.
在某些实施方式中,所述S蛋白变体包含SEQ ID NO:8、21、24、27、30、33、35、38、41、45、59、61和94中任一项所示的氨基酸序列。In certain embodiments, the S protein variant comprises any one of SEQ ID NOs: 8, 21, 24, 27, 30, 33, 35, 38, 41, 45, 59, 61 and 94. Amino acid sequence.
在某些实施方式中,所述S蛋白变体包含SEQ ID NO:8所示的氨基酸序列。In certain embodiments, the S protein variant comprises the amino acid sequence set forth in SEQ ID NO:8.
在某些实施方式中,所述S蛋白变体还包括信号肽,且所述信号肽位于所述S蛋白变体的N末端。In certain embodiments, the S protein variant further includes a signal peptide, and the signal peptide is located at the N-terminus of the S protein variant.
在某些实施方式中,所述信号肽包含SEQ ID NO:1、2和68中任一项所示的氨基酸序列。In certain embodiments, the signal peptide comprises the amino acid sequence set forth in any one of SEQ ID NOs: 1, 2, and 68.
另一方面,本申请提供了分离的核酸分子,所述分离的核酸分子包含编码本申请所述S蛋白变体的多核苷酸。In another aspect, the present application provides an isolated nucleic acid molecule comprising a polynucleotide encoding an S protein variant described herein.
在某些实施方式中,所述核酸分子为DNA。In certain embodiments, the nucleic acid molecule is DNA.
在某些实施方式中,所述核酸分子包含SEQ ID NO:6、9-19、22、25、28、31、36、39、42、46、60、62、63、71、72、74、76、78、80、82、84、95、96和97中任一项所述的核苷酸序列。In certain embodiments, the nucleic acid molecule comprises SEQ ID NO: 6, 9-19, 22, 25, 28, 31, 36, 39, 42, 46, 60, 62, 63, 71, 72, 74, The nucleotide sequence of any one of 76, 78, 80, 82, 84, 95, 96 and 97.
在某些实施方式中,所述核酸分子为mRNA。In certain embodiments, the nucleic acid molecule is mRNA.
在某些实施方式中,所述核酸分子在选自下组的一个或多个位置处包含修饰:5’帽、5’非翻译区、开放阅读框、3’非翻译区和3’聚腺苷酸。In certain embodiments, the nucleic acid molecule comprises a modification at one or more positions selected from the group consisting of: a 5' cap, a 5' untranslated region, an open reading frame, a 3' untranslated region, and a 3' polygon glycosides.
在某些实施方式中,所述核酸分子包含至少一种经修饰的核苷酸。In certain embodiments, the nucleic acid molecule comprises at least one modified nucleotide.
在某些实施方式中,所述核酸分子为密码子优化的。In certain embodiments, the nucleic acid molecule is codon optimized.
在某些实施方式中,所述核酸分子包含SEQ ID NO:7、20、23、26、29、32、37、40、43、47、73、75、77、79、81、83和85中任一项所示的核苷酸序列。In certain embodiments, the nucleic acid molecule comprises SEQ ID NOs: 7, 20, 23, 26, 29, 32, 37, 40, 43, 47, 73, 75, 77, 79, 81, 83, and 85 The nucleotide sequence shown in any one.
另一方面,本申请提供了载体,所述载体包含本申请所述核酸分子。In another aspect, the present application provides vectors comprising the nucleic acid molecules described in the present application.
另一方面,本申请提供了细胞,所述细胞包含所述核酸分子,和/或所述载体。In another aspect, the application provides cells comprising said nucleic acid molecule, and/or said vector.
另一方面,本申请提供了制备本申请所述S蛋白变体的方法,所述方法包括在使得所述S蛋白变体表达的条件下,培养所述细胞。On the other hand, the present application provides a method for preparing the S protein variant described in the present application, the method comprising culturing the cell under conditions such that the S protein variant is expressed.
另一方面,本申请提供了组合物,所述组合物包含(1)编码本申请所述S蛋白变体的mRNA,和(2)递送载体。In another aspect, the present application provides a composition comprising (1) an mRNA encoding an S protein variant described herein, and (2) a delivery vector.
在某些实施方式中,所述mRNA在选自下组的一个或多个位置处包含修饰:5’帽、5’非翻译区、开放阅读框、3’非翻译区和poly A尾。In certain embodiments, the mRNA comprises modifications at one or more positions selected from the group consisting of: a 5' cap, a 5' untranslated region, an open reading frame, a 3' untranslated region, and a poly A tail.
在某些实施方式中,所述mRNA包含至少一种经修饰的核苷酸。In certain embodiments, the mRNA includes at least one modified nucleotide.
在某些实施方式中,所述mRNA包含的经修饰的核苷酸为假尿苷(Ψ)。In certain embodiments, the mRNA comprises a modified nucleotide that is pseudouridine (Ψ).
在某些实施方式中,所述mRNA是密码子优化的。In certain embodiments, the mRNA is codon optimized.
在某些实施方式中,所述mRNA包含如SEQ ID NO:7、20、23、26、29、32、37、40、43、47、73、75、77、79、81、83和85中任一项所示的核苷酸序列。In certain embodiments, the mRNA comprises as in SEQ ID NO: 7, 20, 23, 26, 29, 32, 37, 40, 43, 47, 73, 75, 77, 79, 81, 83 and 85 The nucleotide sequence shown in any one.
在某些实施方式中,与野生型冠状病毒(例如,SARS CoV-2病毒)的S蛋白相比,所述S蛋白变体在C末端截短了18个氨基酸。In certain embodiments, the S protein variant is truncated by 18 amino acids at the C-terminus compared to the S protein of a wild-type coronavirus (e.g., SARS CoV-2 virus).
在某些实施方式中,所述mRNA包含如SEQ ID NO:7或67所示的核苷酸序列。In certain embodiments, the mRNA comprises a nucleotide sequence set forth in SEQ ID NO: 7 or 67.
在某些实施方式中,所述递送载体包括脂质体。In certain embodiments, the delivery vehicle includes liposomes.
在某些实施方式中,所述递送载体包括脂质纳米颗粒(LNP)。In certain embodiments, the delivery vehicle includes lipid nanoparticles (LNP).
在某些实施方式中,所述递送载体包括阳离子脂质。In certain embodiments, the delivery vehicle includes a cationic lipid.
在某些实施方式中,在所述递送载体中,其中所述阳离子脂质的摩尔比为约45%至约55%。In certain embodiments, the molar ratio of the cationic lipid in the delivery vehicle is from about 45% to about 55%.
在某些实施方式中,所述阳离子脂质包括SM102和/或Dlin-MC3-DMA。例如,所述阳离子脂质可以为SM102。例如,所述SM102的化学结构式可以为:In certain embodiments, the cationic lipid includes SM102 and/or Dlin-MC3-DMA. For example, the cationic lipid may be SM102. For example, the chemical structural formula of SM102 can be:
Figure PCTCN2022136551-appb-000001
Figure PCTCN2022136551-appb-000001
例如,所述阳离子脂质可以为Dlin-MC3-DMA。例如,所述Dlin-MC3-DMA的化学结构式可以为:For example, the cationic lipid can be Dlin-MC3-DMA. For example, the chemical structural formula of Dlin-MC3-DMA can be:
Figure PCTCN2022136551-appb-000002
Figure PCTCN2022136551-appb-000002
在某些实施方式中,所述递送载体包括非阳离子脂质。In certain embodiments, the delivery vehicle includes non-cationic lipids.
在某些实施方式中,所述非阳离子脂质包括磷脂和/或脂质缀合物。In certain embodiments, the noncationic lipids include phospholipids and/or lipid conjugates.
在某些实施方式中,所述磷脂包括二硬脂酰基磷脂酰胆碱(DSPC)。In certain embodiments, the phospholipid includes distearoylphosphatidylcholine (DSPC).
在某些实施方式中,在所述递送载体中,其中所述磷脂的摩尔比为约35%至约40%。In certain embodiments, in the delivery vehicle, the molar ratio of the phospholipids is from about 35% to about 40%.
在某些实施方式中,所述脂质缀合物包括聚乙二醇修饰的脂分子。In certain embodiments, the lipid conjugates comprise polyethylene glycol modified lipid molecules.
在某些实施方式中,在所述递送载体中,其中所述脂质缀合物的摩尔比为约1%至约2%。In certain embodiments, in the delivery vehicle, the molar ratio of the lipid conjugate is from about 1% to about 2%.
在某些实施方式中,所述聚乙二醇修饰的脂分子包括DMG-PEG2000。In certain embodiments, the polyethylene glycol modified lipid molecule includes DMG-PEG2000.
在某些实施方式中,所述递送载体包括胆固醇。In certain embodiments, the delivery vehicle includes cholesterol.
在某些实施方式中,在所述递送载体中,其中所述胆固醇的摩尔比为约8%至约12%。In certain embodiments, in the delivery vehicle, the molar ratio of cholesterol is from about 8% to about 12%.
在某些实施方式中,所述递送载体包含阳离子脂质、胆固醇、磷脂和脂质缀合物,且所述阳离子脂质、胆固醇、磷脂和脂质缀合物的质量比为50:10:38.5:1.5。In certain embodiments, the delivery vehicle comprises cationic lipids, cholesterol, phospholipids and lipid conjugates, and the mass ratio of the cationic lipids, cholesterol, phospholipids and lipid conjugates is 50:10: 38.5:1.5.
在某些实施方式中,所述递送载体包含SM102、胆固醇、DSPC和DMG-PEG2000,且所述SM102、胆固醇、DSPC和DMG-PEG2000的质量比为50:10:38.5:1.5。In certain embodiments, the delivery vehicle includes SM102, cholesterol, DSPC and DMG-PEG2000, and the mass ratio of SM102, cholesterol, DSPC and DMG-PEG2000 is 50:10:38.5:1.5.
在某些实施方式中,在某些实施方式中,所述mRNA包载在所述递送载体中。In certain embodiments, the mRNA is encapsulated in the delivery vector.
另一方面,本申请提供了药物组合物,所述药物组合物包含本申请所述S蛋白变体、所述核酸分子、所述载体、所述细胞和/或所述组合物,以及任选地药学上可接受的载体。In another aspect, the present application provides a pharmaceutical composition comprising the S protein variant of the present application, the nucleic acid molecule, the vector, the cell and/or the composition, and optionally a pharmaceutically acceptable carrier.
另一方面,本申请提供了疫苗,所述疫苗包含本申请所述S蛋白变体、所述核酸分子、所述载体、所述细胞、所述组合物和/或所述药物组合物,以及药学上可接受的佐剂。In another aspect, the present application provides a vaccine comprising the S protein variant, the nucleic acid molecule, the vector, the cell, the composition and/or the pharmaceutical composition of the present application, and Pharmaceutically acceptable adjuvants.
在某些实施方式中,所述疫苗为蛋白疫苗。In certain embodiments, the vaccine is a protein vaccine.
在某些实施方式中,所述疫苗为核酸疫苗。In certain embodiments, the vaccine is a nucleic acid vaccine.
在某些实施方式中,所述疫苗为DNA疫苗。In certain embodiments, the vaccine is a DNA vaccine.
在某些实施方式中,所述疫苗为mRNA疫苗。In certain embodiments, the vaccine is an mRNA vaccine.
另一方面,本申请提供了试剂盒,所述试剂盒包含本申请所述S蛋白变体、所述核酸分子、所述载体、所述细胞、所述合物、所述药物组合物和/或所述疫苗。On the other hand, the present application provides a kit comprising the S protein variant of the present application, the nucleic acid molecule, the vector, the cell, the compound, the pharmaceutical composition and/or or said vaccine.
另一方面,本申请提供了本申请所述S蛋白变体、所述核酸分子、所述载体、所述细胞、所述组合物、所述药物组合物和/或所述疫苗在制备药物中的用途,所述药物用于缓解、预防和/或治疗冠状病毒引起的疾病。On the other hand, the present application provides the S protein variant, the nucleic acid molecule, the vector, the cell, the composition, the pharmaceutical composition and/or the vaccine described in the present application in the preparation of medicines. The medicine is used to alleviate, prevent and/or treat diseases caused by coronavirus.
在某些实施方式中,所述疾病或病症为新型冠状病毒肺炎(COVID-19)和/或重症急性呼吸综合征(SARS)。In certain embodiments, the disease or condition is novel coronavirus pneumonia (COVID-19) and/or severe acute respiratory syndrome (SARS).
另一方面,本申请提供了缓解、预防和/或治疗冠状病毒引起的疾病或病症的方法,所述方法包括向有需要的受试者施用本申请所述S蛋白变体、所述核酸分子、所述载体、所述细胞、所述组合物、所述药物组合物和/或所述疫苗。On the other hand, the present application provides methods for alleviating, preventing and/or treating diseases or conditions caused by coronavirus, the method comprising administering the S protein variant, the nucleic acid molecule described in the present application to a subject in need. , the vector, the cell, the composition, the pharmaceutical composition and/or the vaccine.
在某些实施方式中,所述疾病或病症为新型冠状病毒肺炎(COVID-19)和/或重症急性呼吸综合征(SARS)。In certain embodiments, the disease or condition is novel coronavirus pneumonia (COVID-19) and/or severe acute respiratory syndrome (SARS).
另一方面,本申请提供了产生针对冠状病毒抗体的方法,所述方法包括施用本申请所述S蛋白变体、所述核酸分子、所述的载体、所述细胞、所述组合物、所述药物组合物和/或所述疫苗。On the other hand, the present application provides a method for producing antibodies against coronavirus, the method comprising administering the S protein variant, the nucleic acid molecule, the vector, the cell, the composition, the the pharmaceutical composition and/or the vaccine.
另一方面,本申请提供了激活免疫的方法,所述方法包括施用所述S蛋白变体、所述核酸分子、所述载体、所述细胞、所述组合物、所述药物组合物和/或所述疫苗。In another aspect, the application provides a method of activating immunity, the method comprising administering the S protein variant, the nucleic acid molecule, the vector, the cell, the composition, the pharmaceutical composition and/or or said vaccine.
本领域技术人员能够从下文的详细描述中容易地洞察到本申请的其它方面和优势。下文的详细描述中仅显示和描述了本申请的示例性实施方式。如本领域技术人员将认识到的,本申请的内容使得本领域技术人员能够对所公开的具体实施方式进行改动而不脱离本申请所涉及发明的精神和范围。相应地,本申请的附图和说明书中的描述仅仅是示例性的,而非为限制性的。Those skilled in the art will readily appreciate other aspects and advantages of the present application from the detailed description below. Only exemplary embodiments of the present application are shown and described in the following detailed description. As those skilled in the art will realize, the contents of this application enable those skilled in the art to make changes to the specific embodiments disclosed without departing from the spirit and scope of the invention covered by this application. Accordingly, the drawings and descriptions of the present application are illustrative only and not restrictive.
附图说明Description of the drawings
本申请所涉及的发明的具体特征如所附权利要求书所显示。通过参考下文中详细描述的示例性实施方式和附图能够更好地理解本申请所涉及发明的特点和优势。对附图简要说明如下:The specific features of the invention to which this application relates are set forth in the appended claims. The features and advantages of the invention to which this application relates can be better understood by reference to the exemplary embodiments described in detail below and the accompanying drawings. A brief description of the drawings is as follows:
图1A显示的是本申请所述S蛋白变体的mRNA转染293T细胞的体外表达结果。Figure 1A shows the in vitro expression results of 293T cells transfected with the mRNA of the S protein variant described in this application.
图1B显示的是本申请所述表达SARS病毒的S蛋白的mRNA转染细胞的体外表达结果。Figure 1B shows the in vitro expression results of cells transfected with the mRNA expressing the S protein of SARS virus described in this application.
图1C显示的是本申请所述S蛋白变体的mRNA用脂质体包被转染293A细胞后,Western Blot检测蛋白表达的结果图,其中,S:野生型S蛋白mRNA;SDC60 Nat:带Nat(病毒原始)信号肽,密码子优化的野生型S蛋白mRNA(密码子序列代号SDC60,其中序列中GC含量为60%);SDC60 Alb:带Alb(血清白蛋白)信号肽的SDC60密码子序列的S蛋白mRNA;FL:全长S蛋白;DC18:C端截短18个氨基酸的S蛋白突变体;2P:包含2个脯氨酸(Proline)序列突变(K986P和V987P)的S蛋白突变体。Figure 1C shows the results of Western Blot detection of protein expression after the mRNA of the S protein variant described in the present application was transfected with liposomes into 293A cells, where, S: wild-type S protein mRNA; SDC60 Nat: band Nat (original virus) signal peptide, codon-optimized wild-type S protein mRNA (codon sequence code SDC60, in which the GC content in the sequence is 60%); SDC60 Alb: SDC60 codon with Alb (serum albumin) signal peptide The sequence of S protein mRNA; FL: full-length S protein; DC18: S protein mutant with 18 amino acids truncated at the C terminus; 2P: S protein mutation containing 2 proline (Proline) sequence mutations (K986P and V987P) body.
图2显示的是使用本申请的脂质纳米颗粒免疫小鼠的示意图。Figure 2 shows a schematic diagram of immunizing mice using lipid nanoparticles of the present application.
图3显示的是mRNA疫苗二免后的第1周S蛋白结合抗体滴度,其中,S:野生型S蛋白mRNA;SDC60 Alb-2P:带Alb信号肽,含2个脯氨酸突变(K986P,V987P),SDC60密码子序列的S蛋白mRNA;SDC60 Alb-DC18:带Alb信号肽,基于SDC60密码子序列的C端截短18个氨基酸的S蛋白mRNA。Figure 3 shows the S protein-binding antibody titers in the first week after the second immunization of the mRNA vaccine. Among them, S: wild-type S protein mRNA; SDC60 Alb-2P: with Alb signal peptide and containing 2 proline mutations (K986P , V987P), S protein mRNA of SDC60 codon sequence; SDC60 Alb-DC18: with Alb signal peptide, S protein mRNA with 18 amino acids truncated at the C-terminus based on the SDC60 codon sequence.
具体实施方式Detailed ways
以下由特定的具体实施例说明本申请发明的实施方式,本领域技术人员可由本说明书所公开的内容容易地了解本申请发明的其他优点及效果。The implementation of the invention of the present application will be described below with specific examples. Those skilled in the art can easily understand other advantages and effects of the invention of the present application from the contents disclosed in this specification.
术语定义Definition of Terms
在本申请中,术语“递送载体”通常是指能够将试剂(例如,mRNA)递送至靶细胞的转移媒介物。递送载体可以将试剂(例如,mRNA)递送到特定的细胞亚类。例如,借助递送载体的固有特征或者通过与载体相偶联的部分、包含在其内的部分(或者与载体结合的部分,从而使得该部分和该递送载体维持在一起,进而使得该部分足以靶向递送载体)使递送载体靶向某些类型的细胞。递送载体还可提高要递送的试剂(例如,mRNA)的体内半衰期和/或要递送的试剂的生物利用度。递送载体可包括病毒载体、病毒样颗粒、聚阳离子载体、肽载体、脂质体和/或杂交载体。例如,如果靶细胞是肝细胞,所述递送载体的性质(例如,尺寸、电荷和/或pH)可以有效地将所述递送载体和/或其中包载的分子(例如,mRNA)递送至靶细胞、降低免疫清除和/或促进在该靶细胞中停留。In this application, the term "delivery vector" generally refers to a transfer vehicle capable of delivering an agent (eg, mRNA) to a target cell. Delivery vehicles can deliver agents (eg, mRNA) to specific cell subtypes. For example, by means of inherent characteristics of the delivery vehicle or by means of a moiety coupled to, contained within (or a moiety bound to the carrier) such that the moiety and the delivery vehicle are maintained together, thereby rendering the moiety sufficient to target the target. Targeting the delivery vector to certain types of cells. The delivery vehicle may also increase the in vivo half-life of the agent to be delivered (eg, mRNA) and/or the bioavailability of the agent to be delivered. Delivery vectors may include viral vectors, virus-like particles, polycationic vectors, peptide vectors, liposomes, and/or hybrid vectors. For example, if the target cell is a hepatocyte, the delivery vector has properties (e.g., size, charge, and/or pH) that are effective in delivering the delivery vector and/or the molecule entrapped therein (e.g., mRNA) to the target. cells, reduce immune clearance and/or promote retention in that target cell.
在本申请中,术语“多核苷酸”通常包括DNA分子(例如cDNA或基因组DNA)、RNA分子(例如mRNA)、使用核苷酸类似物(例如肽核酸和非天然存在的核苷酸类似物)产生的DNA或RNA的类似物,及其杂合体。核酸分子可以是单链或双链的。In this application, the term "polynucleotide" generally includes DNA molecules (eg, cDNA or genomic DNA), RNA molecules (eg, mRNA), nucleotide analogs (eg, peptide nucleic acids, and non-naturally occurring nucleotide analogs). ), and hybrids thereof. Nucleic acid molecules can be single-stranded or double-stranded.
在本申请中,术语“分离的核酸分子”通常是指从5’至3’末端阅读的脱氧核糖核苷酸或核糖核苷酸碱基的单链或双链聚合物或其类似物,其已与至少约50%的当从来源细胞分离总核酸时与核酸分子一起被天然发现的多肽、肽、脂质、糖类、多核苷酸或其它材料分离。例如,分离的核酸分子大体上不含任何其它污染性核酸分子或在核酸的天然环境中发现的可干扰其的用途或其治疗性、诊断性、预防性或研究用途的其它分子。In this application, the term "isolated nucleic acid molecule" generally refers to a single- or double-stranded polymer or analog thereof of deoxyribonucleotide or ribonucleotide bases, read from the 5' to the 3' end, which has been separated from at least about 50% of the polypeptides, peptides, lipids, carbohydrates, polynucleotides or other materials that are naturally found with the nucleic acid molecules when the total nucleic acid is isolated from the source cell. For example, an isolated nucleic acid molecule is substantially free of any other contaminating nucleic acid molecules or other molecules found in the nucleic acid's natural environment that could interfere with its use or its therapeutic, diagnostic, prophylactic, or research uses.
在本申请中,术语“mRNA”通常是指经过处理去除了内含子,且能够被翻译成多肽的RNA转录本。mRNA通常包括5'帽子、5'非翻译区域(5'UTR)、编码区(又称开放阅读框)、3'非翻译区域(3'UTR)和poly(A)尾。In this application, the term "mRNA" generally refers to an RNA transcript that has been processed to remove introns and capable of being translated into a polypeptide. mRNA usually includes a 5' cap, a 5' untranslated region (5'UTR), a coding region (also known as an open reading frame), a 3' untranslated region (3'UTR), and a poly(A) tail.
在本申请中,术语“修饰”用于核酸(例如RNA或DNA)时通常是指,与相应的野生型相比,所述核酸具有不同的核苷酸分子,不同的核苷酸序列,由不同的键组成和/或在其结构中掺入非天然部分。例如,所述修饰可包括核苷酸的修饰,例如,所述核苷酸可包含经修饰的碱基、糖或磷酸基团。例如,所述修饰可包括不同的核苷酸序列但是编码相同氨基酸序列的多肽或蛋白质,或相同功能的多肽或蛋白质。所述修饰可以是化学修饰和/或生物修饰。“化学修饰”可包括引入不同于野生型或天然存在的核酸中所见到的那些化学物质的修饰,例如,共价修饰,例如,引入经修饰的核苷酸(例如,核苷酸类似物,或者引入在这些核酸分子中未天然发现的侧基)。术语“经修饰的核苷酸”通常是指核酸聚合物中的单元,其含有经修饰的碱基、糖或磷酸基团,或在其结构中掺入非天然部分。In this application, the term "modification" when applied to a nucleic acid, such as RNA or DNA, generally means that the nucleic acid has a different nucleotide molecule, a different nucleotide sequence, compared to the corresponding wild type, consisting of Different bond compositions and/or the incorporation of unnatural moieties into their structure. For example, the modification may include modification of a nucleotide, for example, the nucleotide may include a modified base, sugar, or phosphate group. For example, the modifications may include polypeptides or proteins with different nucleotide sequences but encoding the same amino acid sequence, or the same function. The modification may be chemical modification and/or biological modification. "Chemical modification" may include modifications that introduce chemicals different from those found in wild-type or naturally occurring nucleic acids, e.g., covalent modifications, e.g., the introduction of modified nucleotides (e.g., nucleotide analogs , or introduce side groups not naturally found in these nucleic acid molecules). The term "modified nucleotide" generally refers to units in nucleic acid polymers that contain modified bases, sugars, or phosphate groups, or that incorporate non-natural moieties into their structure.
在本申请中,术语“跨膜域”通常是指蛋白质序列中跨越细胞膜的区域。In this application, the term "transmembrane domain" generally refers to the region of a protein sequence that spans the cell membrane.
在本申请中,术语“密码子优化”用于核酸时,通常表示通过用在细胞中具有不同的相对使用频率的编码相同氨基酸残基的密码子,替换亲代多肽编码核酸中的一个、至少一个、或一个以上密码子,已经改良而在细胞中具有改善的表达的编码多肽的核酸,例如哺乳动物细胞或细菌细胞。As used herein, the term "codon optimization", when applied to nucleic acids, generally means the replacement of one, at least one, of the parent polypeptide-encoding nucleic acid with a codon encoding the same amino acid residue that has a different relative frequency of use in the cell. , or a nucleic acid encoding a polypeptide in which one or more codons have been modified to have improved expression in a cell, such as a mammalian cell or a bacterial cell.
在本申请中,术语“信号肽”通常是指作为N-端肽存在于蛋白前体形式上的前肽。信号肽的功能是促进连接至内质网的表达多肽的易位。信号肽通常在该过程中被切除。信号肽对于用于产生多肽的生物体可以是异源的或同源的。In this application, the term "signal peptide" generally refers to a propeptide present as an N-terminal peptide on the precursor form of a protein. The function of the signal peptide is to facilitate the translocation of the expressed polypeptide to the endoplasmic reticulum. The signal peptide is usually cleaved during this process. A signal peptide may be heterologous or homologous to the organism used to produce the polypeptide.
在本申请中,术语“药物组合物”通常是指以允许活性成分(例如,本申请的S蛋白变体、核酸分子)的生物学活性有效的形式的制剂,并且其不含有对所述制剂待施用的受试者有不可接受的毒性的另外成分。这些制剂可为无菌的。In this application, the term "pharmaceutical composition" generally refers to a preparation in a form that is effective to allow the biological activity of the active ingredient (e.g., S protein variant, nucleic acid molecule of the present application), and which does not contain ingredients that are harmful to the preparation. Additional ingredients that have unacceptable toxicity to the subject are to be administered. These preparations can be sterile.
在本申请中,术语“S蛋白”,也可称为“刺突蛋白”或“Spike蛋白”,通常是指冠状病毒表面的膜蛋白,其可在病毒表面形成突出的同型三聚体。该术语还可包括S蛋白的糖基化形式。S蛋白通常包含两个功能性亚基S1和S2,其中S1亚基负责与宿主细胞受体结合,S2亚基负责病毒膜和细胞膜融合。S蛋白可以介导冠状病毒进入宿主细胞。不同的冠状病毒使用S1亚基内的不同结构域来识别靶细胞表面的附着受体并通过受体进入靶细胞。对于SARS-CoV和/或SARS-CoV-2,可通过S蛋白S1亚基的结构域B与血管紧张素转化酶2(ACE2)直接相互作用而进入靶细胞。另外,病毒进入宿主需要引发(priming)S蛋白,这需要通过宿主的蛋白酶在S1/S2和S2'位点进行S蛋白裂解,并由S2亚基驱动病毒胞膜融合。S1亚基包含N端结构域和受体结合域(RBD),S2亚基包含融合肽(FP)、七肽重复序列1(HR1)、七肽重复序列2(HR2)、跨膜域(TM domain)和细胞质尾巴结构域。“S蛋白”涵盖任何病毒来源的S蛋白,例如,MERS CoV、SARS-CoV和/或SARS-CoV-2。示例性的SARS-CoV-2的S蛋白的氨基酸序列可参见NCBI数据库登录号YP_009724390.1。示例性的SARS-CoV的S蛋白的氨基酸序列可参见NCBI数据库登录号YP009825051.1。示例性的MERS-CoV的S蛋白的氨基酸序列可参见NCBI数据库登录号NC019843。In this application, the term "S protein", which may also be called "Spike protein" or "Spike protein", generally refers to the membrane protein on the surface of coronavirus, which can form protruding homotrimers on the surface of the virus. The term may also include glycosylated forms of S protein. S protein usually contains two functional subunits, S1 and S2. The S1 subunit is responsible for binding to host cell receptors, and the S2 subunit is responsible for the fusion of viral membranes and cell membranes. The S protein can mediate coronavirus entry into host cells. Different coronaviruses use different domains within the S1 subunit to recognize attachment receptors on the surface of target cells and enter target cells through the receptors. For SARS-CoV and/or SARS-CoV-2, it can enter target cells through direct interaction between domain B of the S1 subunit of the S protein and angiotensin-converting enzyme 2 (ACE2). In addition, virus entry into the host requires priming of the S protein, which requires cleavage of the S protein at the S1/S2 and S2' sites by the host's protease, and the S2 subunit drives viral membrane fusion. The S1 subunit contains the N-terminal domain and the receptor binding domain (RBD), and the S2 subunit contains the fusion peptide (FP), heptapeptide repeat 1 (HR1), heptapeptide repeat 2 (HR2), and the transmembrane domain (TM). domain) and cytoplasmic tail domain. "S protein" encompasses S protein of any viral origin, for example, MERS CoV, SARS-CoV and/or SARS-CoV-2. The exemplary amino acid sequence of the S protein of SARS-CoV-2 can be found in the NCBI database accession number YP_009724390.1. The exemplary amino acid sequence of the S protein of SARS-CoV can be found in the NCBI database accession number YP009825051.1. The amino acid sequence of the exemplary S protein of MERS-CoV can be found in the NCBI database accession number NC019843.
在本申请中,术语“野生型冠状病毒的S蛋白”通常是指包含完整序列的细胞质尾巴结构域和/或跨膜域的冠状病毒的S蛋白。野生型冠状病毒的S蛋白可以是从大自然中获得的冠状病毒的全长序列的S蛋白。示例性的SARS-CoV-2的S蛋白的全长氨基酸序列可参见NCBI数据库登录号YP_009724390.1或Uniprot数据库登录号P0DTC2。野生型SARS-CoV-2的S蛋白可包含1273个氨基酸(aa),自N端至C端,通常依次包含13aa的信号肽,然后是S1亚基(氨基酸残基14-685位)和S2亚基(氨基酸残基686-1273位)。在S1亚基内,自N端至C端依次包含N端结构域(氨基酸残基14-305位)和一个受体结合结构域(RBD;氨基酸残基319-541位),在S2亚基内,自N端至C端依次包含融合肽(FP;氨基酸残基788-806)、七肽重复序列1和2(HR1;氨基酸残基912-984位和HR2;氨基酸残基1163-1213)、跨膜域(TMD;氨基酸残基1213-1237位)和细胞质尾巴结构域(cytoplasmic tail;氨基酸残基1237-1273位)。示例性的SARS-CoV的S蛋白的全长氨基酸序列可参见NCBI数据库登录号YP_009825051.1或Uniprot数据库登录号P59594,野生型SARS-CoV的S蛋白可包含1255个氨基酸(aa),其细胞质尾巴结构域的氨基酸残基为1217-1255位)。“位置”当在本 文中使用时意指蛋白的序列中的定位。位置可以被连续编号,或依照已制定的格式编号。,例如,K986P或V987P是相对于野生型S蛋白具有在位置第986位和第987位氨基酸K和V均突变为P。In this application, the term "S protein of wild-type coronavirus" generally refers to the S protein of a coronavirus that contains the complete sequence of the cytoplasmic tail domain and/or the transmembrane domain. The S protein of wild-type coronavirus can be the S protein of the full-length sequence of coronavirus obtained from nature. The full-length amino acid sequence of the exemplary S protein of SARS-CoV-2 can be found in the NCBI database accession number YP_009724390.1 or the Uniprot database accession number PODTC2. The S protein of wild-type SARS-CoV-2 can contain 1273 amino acids (aa), from the N-terminus to the C-terminus, usually including a 13aa signal peptide in sequence, followed by the S1 subunit (amino acid residues 14-685) and S2 Subunit (amino acid residues 686-1273). Within the S1 subunit, it contains the N-terminal domain (amino acid residues 14-305) and a receptor binding domain (RBD; amino acid residues 319-541) from the N terminus to the C terminus. In the S2 subunit From N-terminus to C-terminus, it contains fusion peptide (FP; amino acid residues 788-806), heptapeptide repeat sequences 1 and 2 (HR1; amino acid residues 912-984 and HR2; amino acid residues 1163-1213) , transmembrane domain (TMD; amino acid residues 1213-1237) and cytoplasmic tail domain (cytoplasmic tail; amino acid residues 1237-1273). The full-length amino acid sequence of the exemplary SARS-CoV S protein can be found in NCBI database accession number YP_009825051.1 or Uniprot database accession number P59594. The wild-type SARS-CoV S protein can contain 1255 amino acids (aa), and its cytoplasmic tail The amino acid residues of the domain are 1217-1255). "Position" when used herein means the location within the sequence of a protein. Positions can be numbered consecutively or according to a defined format. , for example, K986P or V987P is relative to the wild-type S protein with amino acids K and V at positions 986 and 987 both mutated to P.
在本申请中,术语“细胞质尾巴结构域”通常是指野生型S蛋白中位于细胞质内部的结构域。冠状病毒的细胞质尾巴结构域通常富含Cys,且被棕榈酰化。In this application, the term "cytoplasmic tail domain" generally refers to the domain of the wild-type S protein that is located inside the cytoplasm. The cytoplasmic tail domain of coronaviruses is usually Cys-rich and palmitoylated.
在本申请中,术语“截短的细胞质尾巴结构域”通常是指相对于完整的细胞质尾巴结构域,存在氨基酸缺失的细胞质尾巴结构域。In this application, the term "truncated cytoplasmic tail domain" generally refers to a cytoplasmic tail domain with an amino acid deletion relative to an intact cytoplasmic tail domain.
在本申请中,术语“疫苗”通常是指含有有效诱导受试者的抗特定病原体或疾病的治疗程度的免疫性的活性组分的试剂或组合物。As used herein, the term "vaccine" generally refers to an agent or composition containing an active component effective to induce a therapeutic degree of immunity in a subject against a particular pathogen or disease.
在本申请中,术语“脂质纳米颗粒”通常是指包含通过分子间力彼此物理结合(例如,共价或非共价)的多个(即多于一个)脂质分子的颗粒。脂质纳米颗粒可以是例如微球(包括单层和多层囊泡,例如脂质体)、乳液中的分散相、胶团或悬浮液中的内相。脂质纳米颗粒可以包含一种或多种脂质(例如,阳离子脂质、非阳离子脂质和PEG-修饰的脂质)。In this application, the term "lipid nanoparticle" generally refers to particles that contain multiple (ie, more than one) lipid molecules physically bound to each other (eg, covalently or non-covalently) by intermolecular forces. Lipid nanoparticles can be, for example, microspheres (including unilamellar and multilamellar vesicles, such as liposomes), the dispersed phase in emulsions, micelles or the internal phase in suspensions. Lipid nanoparticles can include one or more lipids (eg, cationic lipids, noncationic lipids, and PEG-modified lipids).
在本申请中,术语“脂质体”通常是指通过一个或多个双层的膜与外部介质隔离的具有内部空间的囊泡。例如,所述双层的膜可以通过两性分子形成,如包含空间隔离的亲水性和疏水性结构域的合成或天然来源的脂质;又例如,所述双层的膜可以通过两亲性聚合物和表面活性剂形成。In this application, the term "liposome" generally refers to a vesicle having an internal space separated from an external medium by a membrane of one or more bilayers. For example, the membrane of the bilayer can be formed by amphipathic molecules, such as synthetic or naturally derived lipids containing spatially separated hydrophilic and hydrophobic domains; as another example, the membrane of the bilayer can be formed by amphiphilic molecules. Polymer and surfactant formation.
在本申请中,术语“SARS-CoV-2”通常是指严重急性呼吸道综合征冠状病毒2型,英文全称为Severe Acute Respiratory Syndrome Coronavirus 2。SARS-CoV-2属于冠状病毒科(Coronaviridae)乙型冠状病毒属(Betacoronavirus)沙贝病毒亚属(Sarbecovirus)。SARS-CoV-2是一种具有包膜的、不分节段的正链单股RNA病毒。In this application, the term "SARS-CoV-2" generally refers to severe acute respiratory syndrome coronavirus 2, the full English name is Severe Acute Respiratory Syndrome Coronavirus 2. SARS-CoV-2 belongs to the Betacoronavirus subgenus of the Coronaviridae family and the Sarbecovirus subgenus. SARS-CoV-2 is an enveloped, non-segmented, positive-stranded single-stranded RNA virus.
在本申请中,术语“SARS-CoV类病毒”通常是指严重急性呼吸道综合征相关冠状病毒,即Severe acute respiratory syndrome-related coronavirus,其是冠状病毒科乙型冠状病毒属的一个种。SARS-CoV类病毒也可称为SARS冠状病毒或SARS相关冠状病毒。In this application, the term "SARS-CoV-like" generally refers to Severe acute respiratory syndrome-related coronavirus, a species of the genus Betacoronavirus in the family Coronaviridae. SARS-CoV-like viruses may also be called SARS coronavirus or SARS-related coronavirus.
在本申请中,术语“SARS-CoV”通常是指SARS冠状病毒,即严重急性呼吸道综合征冠状病毒(英文全称为Severe acute respiratory syndrome coronavirus),其属于冠状病毒科(Coronaviridae)乙型冠状病毒属(Betacoronavirus)沙贝病毒亚属(Sarbecovirus)。In this application, the term "SARS-CoV" generally refers to SARS coronavirus, that is, severe acute respiratory syndrome coronavirus (full name in English: Severe acute respiratory syndrome coronavirus), which belongs to the genus Betacoronavirus in the family Coronaviridae. (Betacoronavirus) Subgenus Sarbecovirus.
在本申请中,术语“新型冠状病毒肺炎(COVID-19)”通常是指2019冠状病毒病(英文全称为coronavirus disease 2019),其是由SARS-CoV-2引发的疾病。大多数COVID-19患者的表现以下呼吸道症状为主,常见临床表现包括发热、四肢乏力、干咳等症状。In this application, the term "novel coronavirus pneumonia (COVID-19)" generally refers to coronavirus disease 2019 (full English name is coronavirus disease 2019), which is a disease caused by SARS-CoV-2. Most COVID-19 patients mainly present with lower respiratory tract symptoms, and common clinical manifestations include fever, limb weakness, dry cough and other symptoms.
在本申请中,术语“重症急性呼吸综合征(SARS)”通常是指由SARS-CoV引发的疾病。SARS通常以肌肉疼痛、头痛和发烧的全身症状为特征,并于2-14天内出现咳嗽、呼吸困难和肺炎等呼吸道症状。In this application, the term "severe acute respiratory syndrome (SARS)" generally refers to the disease caused by SARS-CoV. SARS is usually characterized by systemic symptoms of muscle pain, headache, and fever, with respiratory symptoms such as cough, dyspnea, and pneumonia appearing within 2 to 14 days.
在本申请中,术语“药学上可接受的佐剂”通常是指任何与所施用的活性成分相容的溶剂、分散介质、涂层、等渗剂和吸收延迟剂等佐剂、赋形剂或其它药物载体。In this application, the term "pharmaceutically acceptable adjuvant" generally refers to any adjuvant, excipient such as solvents, dispersion media, coatings, isotonic and absorption delaying agents that are compatible with the active ingredient being administered or other pharmaceutical carriers.
在本申请中,术语“SM102”通常是指一种可电离的氨基脂质,已与其他脂质结合用于形成脂质纳米颗粒。SM102的分子结构可参见CAS 2089251-47-6。In this application, the term "SM102" generally refers to an ionizable amino lipid that has been combined with other lipids to form lipid nanoparticles. The molecular structure of SM102 can be found in CAS 2089251-47-6.
发明详述Detailed description of the invention
S蛋白变体S protein variants
一方面,本申请提供了一种S蛋白变体,与野生型冠状病毒的S蛋白相比,其可以不包含完整的细胞质尾巴结构域。在本申请中,与野生型冠状病毒的S蛋白相比,所述S蛋白变体可以包含截短的细胞质尾巴结构域。In one aspect, the present application provides an S protein variant, which may not include a complete cytoplasmic tail domain compared with the S protein of wild-type coronavirus. In the present application, the S protein variant may comprise a truncated cytoplasmic tail domain compared to the S protein of wild-type coronavirus.
在本申请中,与野生型冠状病毒的S蛋白相比,所述S蛋白变体可以不包含细胞质尾巴结构域。In the present application, compared with the S protein of wild-type coronavirus, the S protein variant may not include a cytoplasmic tail domain.
在本申请中,与野生型冠状病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约14个、约15个、约16个、约17个、约18个、约19个或约20个氨基酸。在本申请中,与野生型冠状病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约10个、约20个、约30个、约40个、约50个或约60个氨基酸。In this application, compared with the S protein of wild-type coronavirus, the cytoplasmic tail domain of the S protein variant may be deleted at the C-terminus of about 14, about 15, about 16, about 17, or about 18 , about 19 or about 20 amino acids. In the present application, compared with the S protein of wild-type coronavirus, the cytoplasmic tail domain of the S protein variant may be deleted at the C terminus of about 10, about 20, about 30, about 40, or about 50 or about 60 amino acids.
在本申请中,与野生型冠状病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约22-约64个氨基酸。在本申请中,与野生型冠状病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约22-约60个氨基酸。在本申请中,与野生型冠状病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约30-约60个氨基酸。在本申请中,与野生型冠状病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约40-约60个氨基酸。在本申请中,与野生型冠状病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约30-约40个氨基酸。在本申请中,与野生型冠状病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约20-约30个氨基酸。In the present application, compared with the S protein of wild-type coronavirus, the cytoplasmic tail domain of the S protein variant may be deleted from about 22 to about 64 amino acids at the C terminus. In the present application, compared with the S protein of wild-type coronavirus, the cytoplasmic tail domain of the S protein variant may be deleted from about 22 to about 60 amino acids at the C terminus. In the present application, compared with the S protein of wild-type coronavirus, the cytoplasmic tail domain of the S protein variant may be deleted from about 30 to about 60 amino acids at the C terminus. In the present application, compared with the S protein of wild-type coronavirus, the cytoplasmic tail domain of the S protein variant may be deleted from about 40 to about 60 amino acids at the C terminus. In the present application, compared with the S protein of wild-type coronavirus, the cytoplasmic tail domain of the S protein variant may be deleted from about 30 to about 40 amino acids at the C terminus. In the present application, compared with the S protein of wild-type coronavirus, the cytoplasmic tail domain of the S protein variant may be deleted from about 20 to about 30 amino acids at the C terminus.
在本申请中,与野生型冠状病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失18-20个氨基酸。在本申请中,与野生型冠状病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失18个氨基酸。In the present application, compared with the S protein of wild-type coronavirus, the cytoplasmic tail domain of the S protein variant may lack 18-20 amino acids at the C-terminus. In the present application, compared with the S protein of wild-type coronavirus, the cytoplasmic tail domain of the S protein variant may have 18 amino acids deleted at the C-terminus.
在本申请中,与野生型冠状病毒的S蛋白相比,所述S蛋白变体可以不包含跨膜域。在本申请中,与野生型冠状病毒的S蛋白相比,所述S蛋白变体可以不包含完整的跨膜域。在本申请中,与野生型冠状病毒的S蛋白相比,所述S蛋白变体可以包含截短的跨膜域。In the present application, compared with the S protein of wild-type coronavirus, the S protein variant may not include a transmembrane domain. In this application, compared with the S protein of wild-type coronavirus, the S protein variant may not include a complete transmembrane domain. In the present application, the S protein variant may comprise a truncated transmembrane domain compared to the S protein of wild-type coronavirus.
在本申请中,所述冠状病毒可以为MERS冠状病毒和/或SARS-CoV类病毒。所述SARS-CoV类病毒可以是SARS-CoV或SARS-CoV-2病毒。In this application, the coronavirus may be MERS coronavirus and/or SARS-CoV-like viruses. The SARS-CoV-like virus may be SARS-CoV or SARS-CoV-2 virus.
在本申请中,所述冠状病毒可以为SARS-CoV-2病毒。在本申请中,与野生型SARS-CoV-2病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约14个、约15个、约16个、约17个、约18个、约19个或约20个氨基酸。在本申请中,与野生型SARS-CoV-2病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约10个、约20个、约30个、约40个、约50个或约60个氨基酸。In this application, the coronavirus may be SARS-CoV-2 virus. In the present application, compared with the S protein of the wild-type SARS-CoV-2 virus, the cytoplasmic tail domain of the S protein variant may be deleted at the C-terminus of about 14, about 15, about 16, or about 17 , about 18, about 19 or about 20 amino acids. In this application, compared with the S protein of the wild-type SARS-CoV-2 virus, the cytoplasmic tail domain of the S protein variant may be deleted at the C-terminus of about 10, about 20, about 30, or about 40 , about 50 or about 60 amino acids.
在本申请中,与野生型SARS-CoV-2病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约22-约64个氨基酸。在本申请中,与野生型SARS-CoV-2病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约22-约60个氨基酸。在本申请中,与野生型SARS-CoV-2病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约30-约60个氨基酸。在本申请中,与野生型SARS-CoV-2病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约40-约60个氨基酸。在本申请中,与野生型SARS-CoV-2病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约30-约40个氨基酸。在本申请中,与野生型SARS-CoV-2病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约20-约30个氨基酸。In the present application, compared with the S protein of wild-type SARS-CoV-2 virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 22 to about 64 amino acids at the C terminus. In the present application, compared with the S protein of wild-type SARS-CoV-2 virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 22 to about 60 amino acids at the C terminus. In the present application, compared with the S protein of wild-type SARS-CoV-2 virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 30 to about 60 amino acids at the C terminus. In the present application, compared with the S protein of wild-type SARS-CoV-2 virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 40 to about 60 amino acids at the C terminus. In the present application, compared with the S protein of wild-type SARS-CoV-2 virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 30 to about 40 amino acids at the C terminus. In the present application, compared with the S protein of wild-type SARS-CoV-2 virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 20 to about 30 amino acids at the C terminus.
在本申请中,与野生型SARS-CoV-2病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失18-20个氨基酸。在本申请中,与野生型SARS-CoV-2病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失18个氨基酸。In the present application, compared with the S protein of the wild-type SARS-CoV-2 virus, the cytoplasmic tail domain of the S protein variant may have 18-20 amino acids deleted at the C-terminus. In this application, compared with the S protein of the wild-type SARS-CoV-2 virus, the cytoplasmic tail domain of the S protein variant may have 18 amino acids deleted at the C-terminus.
在本申请中,所述S蛋白变体可包含SEQ ID NO:8、21、24、27、30、33、38、41、45、59和61中任一项所示的氨基酸序列。例如,所述S蛋白变体可包含SEQ ID NO:8所示的氨基酸序列。In this application, the S protein variant may comprise the amino acid sequence shown in any one of SEQ ID NO: 8, 21, 24, 27, 30, 33, 38, 41, 45, 59 and 61. For example, the S protein variant may comprise the amino acid sequence shown in SEQ ID NO:8.
在本申请中,所述冠状病毒可以为SARS-CoV病毒。在本申请中,与野生型SARS-CoV病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约14个、约15个、约16个、约17个、约18个、约19个或约20个氨基酸。在本申请中,与野生型SARS-CoV病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约10个、约20个、约30个、约40个、约50个或约60个氨基酸。In this application, the coronavirus may be SARS-CoV virus. In the present application, compared with the S protein of the wild-type SARS-CoV virus, the cytoplasmic tail domain of the S protein variant may be deleted at the C terminus of about 14, about 15, about 16, about 17, About 18, about 19 or about 20 amino acids. In the present application, compared with the S protein of the wild-type SARS-CoV virus, the cytoplasmic tail domain of the S protein variant may be deleted at the C-terminus of about 10, about 20, about 30, about 40, About 50 or about 60 amino acids.
在本申请中,与野生型SARS-CoV病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约22-约64个氨基酸。在本申请中,与野生型SARS-CoV病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约22-约60个氨基酸。在本申请中,与野生型SARS-CoV病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约30-约60个氨基酸。在本申请中,与野生型SARS-CoV病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约40-约60个氨基酸。在本申请中,与野生型SARS-CoV病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约30-约40个氨基酸。在本申请中,与野生型SARS-CoV病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约20-约30个氨基酸。In the present application, compared with the S protein of wild-type SARS-CoV virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 22 to about 64 amino acids at the C terminus. In the present application, compared with the S protein of wild-type SARS-CoV virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 22 to about 60 amino acids at the C terminus. In the present application, compared with the S protein of wild-type SARS-CoV virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 30 to about 60 amino acids at the C terminus. In the present application, compared with the S protein of wild-type SARS-CoV virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 40 to about 60 amino acids at the C terminus. In the present application, compared with the S protein of wild-type SARS-CoV virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 30 to about 40 amino acids at the C terminus. In the present application, compared with the S protein of wild-type SARS-CoV virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 20 to about 30 amino acids at the C terminus.
在本申请中,与野生型SARS-CoV病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失18-20个氨基酸。在本申请中,与野生型SARS-CoV病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失18个氨基酸。In the present application, compared with the S protein of the wild-type SARS-CoV virus, the cytoplasmic tail domain of the S protein variant may have 18-20 amino acids deleted at the C terminus. In the present application, compared with the S protein of the wild-type SARS-CoV virus, the cytoplasmic tail domain of the S protein variant may have 18 amino acids deleted at the C-terminus.
在本申请中,所述S蛋白变体可包含SEQ ID NO:35所示的氨基酸序列。In this application, the S protein variant may comprise the amino acid sequence shown in SEQ ID NO: 35.
在本申请中,所述冠状病毒可以为MERS-CoV病毒。在本申请中,与野生型MERS-CoV病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约14个、约15个、约16个、约17个、约18个、约19个或约20个氨基酸。在本申请中,与野生型MERS-CoV病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约10个、约20个、约30个、约40个、约50个或约60个氨基酸。In this application, the coronavirus may be MERS-CoV virus. In the present application, compared with the S protein of the wild-type MERS-CoV virus, the cytoplasmic tail domain of the S protein variant may be deleted at the C terminus of about 14, about 15, about 16, about 17, About 18, about 19 or about 20 amino acids. In the present application, compared with the S protein of the wild-type MERS-CoV virus, the cytoplasmic tail domain of the S protein variant may be deleted at the C terminus of about 10, about 20, about 30, about 40, About 50 or about 60 amino acids.
在本申请中,与野生型MERS-CoV病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约22-约64个氨基酸。在本申请中,与野生型MERS-CoV病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约22-约60个氨基酸。在本申请中,与野生型MERS-CoV病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约30-约60个氨基酸。在本申请中,与野生型MERS-CoV病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约40-约60个氨基酸。在本申请中,与野生型MERS-CoV病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约30-约40个氨基酸。在本申请中,与野生型MERS-CoV病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失约20-约30个氨基酸。In the present application, compared with the S protein of wild-type MERS-CoV virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 22 to about 64 amino acids at the C terminus. In the present application, compared with the S protein of wild-type MERS-CoV virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 22 to about 60 amino acids at the C terminus. In the present application, compared with the S protein of wild-type MERS-CoV virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 30 to about 60 amino acids at the C terminus. In the present application, compared with the S protein of wild-type MERS-CoV virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 40 to about 60 amino acids at the C terminus. In the present application, compared with the S protein of wild-type MERS-CoV virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 30 to about 40 amino acids at the C terminus. In the present application, compared with the S protein of wild-type MERS-CoV virus, the cytoplasmic tail domain of the S protein variant may be deleted from about 20 to about 30 amino acids at the C terminus.
在本申请中,与野生型MERS-CoV病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失18-20个氨基酸。在本申请中,与野生型MERS-CoV病毒的S蛋白相比,所述S蛋白变体的细胞质尾巴结构域可以在C末端缺失18个氨基酸。In the present application, compared with the S protein of the wild-type MERS-CoV virus, the cytoplasmic tail domain of the S protein variant may have 18-20 amino acids deleted at the C terminus. In the present application, compared with the S protein of the wild-type MERS-CoV virus, the cytoplasmic tail domain of the S protein variant may have 18 amino acids deleted at the C-terminus.
在本申请中,所述S蛋白变体可包含SEQ ID NO:45所示的氨基酸序列。In this application, the S protein variant may comprise the amino acid sequence shown in SEQ ID NO: 45.
在本申请中,所述S蛋白变体可以包括信号肽,且所述信号肽位于所述S蛋白变体的N末端。在本申请中,所述信号肽可以包含SEQ ID NO:1或2所示的氨基酸序列。In this application, the S protein variant may include a signal peptide, and the signal peptide is located at the N-terminus of the S protein variant. In this application, the signal peptide may comprise the amino acid sequence shown in SEQ ID NO: 1 or 2.
核酸分子nucleic acid molecules
另一方面,本申请提供了分离的核酸分子,所述分离的核酸分子可以包含编码所述S蛋白变体的多核苷酸。In another aspect, the application provides an isolated nucleic acid molecule, which may comprise a polynucleotide encoding the S protein variant.
在本申请中,所述核酸分子可以为DNA。例如,所述DNA可以包含SEQ ID NO:6、9-19、22、25、28、31、36、39、42、46、60、62和63中任一项所示的核苷酸序列。在本申请中,所述DNA可以包含与SEQ ID NO:6、9-19、22、25、28、31、36、39、42、46、60、62、63、71、72、74、76、78、80、82、84、95、96和97中任一项所示的核苷酸序列具有至少80%(例如,82%、85%、88%、90%、95%、98%、99%或以上)的序列同一性的核苷酸序列。In this application, the nucleic acid molecule may be DNA. For example, the DNA may comprise the nucleotide sequence shown in any one of SEQ ID NOs: 6, 9-19, 22, 25, 28, 31, 36, 39, 42, 46, 60, 62 and 63. In this application, the DNA may comprise SEQ ID NOs: 6, 9-19, 22, 25, 28, 31, 36, 39, 42, 46, 60, 62, 63, 71, 72, 74, 76 , 78, 80, 82, 84, 95, 96 and 97 have at least 80% (for example, 82%, 85%, 88%, 90%, 95%, 98%, 99% or above) sequence identity.
例如,所述DNA可以包含SEQ ID NO:6、9-19、22、25、28和31中任一项所示的核苷酸序列。For example, the DNA may comprise the nucleotide sequence shown in any one of SEQ ID NOs: 6, 9-19, 22, 25, 28 and 31.
例如,所述DNA可以包含SEQ ID NO:6、9-18、60、62和63中任一项所述的核苷酸序列。For example, the DNA may comprise the nucleotide sequence described in any one of SEQ ID NOs: 6, 9-18, 60, 62 and 63.
例如,所述DNA可以包含SEQ ID NO:71、72、74、76、78、80、82、84、95、96和97中任一项所述的核苷酸序列。For example, the DNA may comprise the nucleotide sequence described in any one of SEQ ID NOs: 71, 72, 74, 76, 78, 80, 82, 84, 95, 96 and 97.
在本申请中,所述DNA可以在5’帽处包含修饰。在本申请中,所述DNA可以在5’非翻译区处包含修饰。在本申请中,所述DNA可以在开放阅读框处包含修饰。在本申请中,所述DNA可以在3’非翻译区处包含修饰。在本申请中,所述DNA可以在3’聚腺苷酸包含修饰。在本申请中,所述DNA包含至少一种经修饰的核苷酸。In this application, the DNA may comprise modifications at the 5' cap. In this application, the DNA may comprise modifications at the 5' untranslated region. In this application, the DNA may comprise modifications at the open reading frame. In this application, the DNA may comprise modifications at the 3' untranslated region. In this application, the DNA may comprise modifications at the 3' poly(A). In this application, the DNA contains at least one modified nucleotide.
在本申请中,所述DNA可以为密码子优化的。例如,所述DNA可以包含SEQ ID NO:9-18中任一项所述的核苷酸序列。In this application, the DNA may be codon optimized. For example, the DNA may comprise the nucleotide sequence described in any one of SEQ ID NOs: 9-18.
在本申请中,所述核酸分子可以为RNA。在本申请中,所述核酸分子可以为mRNA。所述mRNA可以包括5’帽、5’非翻译区(5’UTR)、开放阅读框、3’非翻译区(3’UTR)和poly A尾。In this application, the nucleic acid molecule may be RNA. In this application, the nucleic acid molecule may be mRNA. The mRNA may include a 5' cap, a 5' untranslated region (5' UTR), an open reading frame, a 3' untranslated region (3' UTR), and a poly A tail.
例如,所述5’UTR可以包含SEQ ID NO:64所示的核苷酸序列。For example, the 5' UTR may comprise the nucleotide sequence shown in SEQ ID NO: 64.
例如,所述5’UTR可以包含SEQ ID NO:65所示的核苷酸序列。For example, the 5' UTR may comprise the nucleotide sequence shown in SEQ ID NO: 65.
例如,所述poly A可以包含SEQ ID NO:66所示的核苷酸序列。For example, the poly A may comprise the nucleotide sequence shown in SEQ ID NO: 66.
例如,所述开放阅读框可以包含SEQ ID NO:7、20、23、26、29、32、37、40、43和47 中任一项所示的核苷酸序列。在本申请中,所述开放阅读框可以包含与SEQ ID NO:7、20、23、26、29、32、37、40、43、47、73、75、77、79、81、83和85中任一项所示的核苷酸序列具有至少80%(例如,82%、85%、88%、90%、95%、98%、99%或以上)的序列同一性的核苷酸序列。For example, the open reading frame may comprise the nucleotide sequence shown in any one of SEQ ID NO: 7, 20, 23, 26, 29, 32, 37, 40, 43 and 47. In this application, the open reading frame may contain the same sequence as SEQ ID NO: 7, 20, 23, 26, 29, 32, 37, 40, 43, 47, 73, 75, 77, 79, 81, 83 and 85 A nucleotide sequence having a sequence identity of at least 80% (e.g., 82%, 85%, 88%, 90%, 95%, 98%, 99% or more) .
例如,所述开放阅读框可以包含SEQ ID NO:7、20、23、26、29和32中任一项所示的核苷酸序列。For example, the open reading frame may comprise the nucleotide sequence shown in any one of SEQ ID NO: 7, 20, 23, 26, 29 and 32.
例如,所述开放阅读框可以包含SEQ ID NO:7所示的核苷酸序列。For example, the open reading frame may comprise the nucleotide sequence shown in SEQ ID NO:7.
又例如,所述mRNA可以包括5’帽、5’非翻译区(5’UTR)、开放阅读框、3’非翻译区(3’UTR)和poly A尾;其中,所述5’UTR可以包含SEQ ID NO:64所示的核苷酸序列,所述5’UTR可以包含SEQ ID NO:65所示的核苷酸序列,所述poly A可以包含SEQ ID NO:66所示的核苷酸序列,所述开放阅读框可以包含SEQ ID NO:7所示的核苷酸序列;所述mRNA可以包含SEQ ID NO:67所示的核苷酸序列。For another example, the mRNA may include a 5' cap, a 5' untranslated region (5'UTR), an open reading frame, a 3' untranslated region (3'UTR) and a poly A tail; wherein the 5' UTR can Containing the nucleotide sequence shown in SEQ ID NO:64, the 5'UTR may include the nucleotide sequence shown in SEQ ID NO:65, and the poly A may include the nucleoside shown in SEQ ID NO:66 acid sequence, the open reading frame may include the nucleotide sequence shown in SEQ ID NO:7; the mRNA may include the nucleotide sequence shown in SEQ ID NO:67.
在本申请中,所述RNA(例如,mRNA)可以在5’帽处包含修饰。在本申请中,所述RNA(例如,mRNA)可以在5’非翻译区处包含修饰。在本申请中,所述RNA(例如,mRNA)可以在开放阅读框处包含修饰。在本申请中,所述RNA(例如,mRNA)可以在3’非翻译区处包含修饰。在本申请中,所述RNA(例如,mRNA)可以在3’聚腺苷酸包含修饰。在本申请中,所述RNA(例如,mRNA)包含至少一种经修饰的核苷酸。In this application, the RNA (e.g., mRNA) may comprise modifications at the 5' cap. In this application, the RNA (e.g., mRNA) may comprise modifications at the 5' untranslated region. In this application, the RNA (eg, mRNA) may comprise modifications at the open reading frame. In this application, the RNA (e.g., mRNA) may comprise modifications at the 3' untranslated region. In this application, the RNA (e.g., mRNA) may comprise modifications at the 3' poly(A). In this application, the RNA (eg, mRNA) includes at least one modified nucleotide.
在本申请中,所述mRNA可以为密码子优化的。In this application, the mRNA may be codon optimized.
所述核酸分子的(例如DNA或RNA)修饰可以是化学修饰或生物修饰。在本申请中,所述核酸分子可以包含一个或多个修饰的核碱基、核苷或核苷酸。与未经修饰的参考序列(例如,天然存在的或野生型的核酸分子)相比,修饰的核酸分子可具有有用的性质,例如,包括增强的稳定性、提高的细胞内保留、增强的翻译效果和/或降低的免疫原性。因此,使用修饰的核酸分子可以提高蛋白质生产的效率、提高核酸在细胞内的保留以及降低免疫原性。The modification of the nucleic acid molecule (eg DNA or RNA) may be a chemical modification or a biological modification. In this application, the nucleic acid molecule may comprise one or more modified nucleobases, nucleosides or nucleotides. Modified nucleic acid molecules can have useful properties compared to an unmodified reference sequence (e.g., a naturally occurring or wild-type nucleic acid molecule), including, for example, enhanced stability, increased intracellular retention, enhanced translation effect and/or reduced immunogenicity. Therefore, the use of modified nucleic acid molecules can increase the efficiency of protein production, improve nucleic acid retention within cells, and reduce immunogenicity.
核酸分子的(例如DNA或RNA)密码子优化方法是本领域已知的,可用于多种目的:匹配宿主生物中的密码子频率以确保正确折叠;偏置GC含量以增加核酸分子稳定性或减少二级结构;最小化可能重复的串联重复密码子或可能损害基因的构建或表达的碱基序列;定制转录和翻译控制区;插入或去除蛋白质运输序列;去除/添加编码蛋白中的翻译后修饰位点(例如糖基化位点);添加,去除或改组蛋白结构域;插入或删除限制性位点;修饰核糖体结合位点和核酸分子降解位点;调节翻译速率以允许蛋白质的各个结构域正确折叠;或,减少或消除多核苷酸内有问题的二级结构。Codon optimization methods for nucleic acid molecules (e.g., DNA or RNA) are known in the art and can be used for a variety of purposes: matching codon frequencies in the host organism to ensure correct folding; biasing GC content to increase nucleic acid molecule stability; or Reduce secondary structure; minimize tandem repeat codons that may be repeated or base sequences that may impair gene construction or expression; customize transcription and translation control regions; insert or remove protein transport sequences; remove/add post-translational sequences in encoded proteins Modify sites (such as glycosylation sites); add, remove, or shuffle protein domains; insert or delete restriction sites; modify ribosome binding sites and nucleic acid molecule degradation sites; regulate translation rates to allow individual The domain folds correctly; or, problematic secondary structure within the polynucleotide is reduced or eliminated.
脂质纳米颗粒lipid nanoparticles
另一方面,本申请提供了一种组合物,所述组合物可包含本申请所述的mRNA,还可以包含递送载体。On the other hand, the present application provides a composition, which may include the mRNA described in the present application and may also include a delivery carrier.
本申请的mRNA可以配制在纳米颗粒或其他递送载体中,例如,以避免它们在递送至受试者时被降解。在本申请中,所述mRNA可以被包封在纳米颗粒内。在特定的实施方案中,纳米颗粒包括脂质。脂质纳米颗粒可以包括但不限于脂质体和胶束。在本申请中,所述脂质纳米颗粒可以包括阳离子和/或可电离的脂质、阴离子脂质、中性脂质、两亲性脂质、聚乙二醇化的脂质和/或结构性脂质,或上述的组合在某些实施方案中,脂质纳米颗粒包含一种或多种本申请所述的RNA,例如mRNA,又例如,编码S蛋白变体的mRNA。The mRNAs of the present application may be formulated in nanoparticles or other delivery vehicles, for example, to avoid their degradation upon delivery to a subject. In this application, the mRNA can be encapsulated within nanoparticles. In specific embodiments, the nanoparticles include lipids. Lipid nanoparticles may include, but are not limited to, liposomes and micelles. In this application, the lipid nanoparticles may include cationic and/or ionizable lipids, anionic lipids, neutral lipids, amphipathic lipids, pegylated lipids and/or structural Lipid, or a combination of the above. In certain embodiments, lipid nanoparticles comprise one or more RNAs described herein, such as mRNA, and for example, mRNA encoding an S protein variant.
本申请所述组合物中的递送载体可以是纳米脂质颗粒。所述纳米脂质颗粒可包含一种或多种(例如1、2、3、4、5、6、7或8)阳离子和/或可离子化的脂质。“阳离子脂质”通常指在一定pH(例如,生理pH)下携带任意数目的净正电荷的脂质。所述阳离子脂质可包括但不限于SM102、3-(双十二烷基氨基)-N1,N1,4-三十二烷基-1-哌嗪乙胺(KL10)、N1-[2-(二十二烷基氨基)乙基]-N1,N4,N4-三十二烷基-1,4-哌嗪二乙胺(KL22)、14,25-二十三烷基-15,18,21,24-四氮杂八孔并烷(KL25)、DLin-DMA、DLin-K-DMA、DLin-KC2-DMA、Octyl-CLinDMA、辛基-CLinDMA(2S)、DODAC、DOTMA、DDAB、DOTAP、DOTAP.C1、DC-Choi、DOSPA、DOGS、DODAP、DODMA和DMRIE。例如,所述阳离子脂质可以是SM102The delivery vehicle in the compositions described herein may be lipid nanoparticles. The nanolipid particles may comprise one or more ( eg 1, 2, 3, 4, 5, 6, 7 or 8) cationic and/or ionizable lipids. "Cationic lipid" generally refers to a lipid that carries any number of net positive charges at a certain pH (eg, physiological pH). The cationic lipids may include, but are not limited to, SM102, 3-(didodecylamino)-N1,N1,4-triacontyl-1-piperazineethylamine (KL10), N1-[2- (Docosylamino)ethyl]-N1,N4,N4-tricosyl-1,4-piperazinediethylamine (KL22), 14,25-tricosyl-15,18 ,21,24-tetraazaoctaporanane (KL25), DLin-DMA, DLin-K-DMA, DLin-KC2-DMA, Octyl-CLinDMA, octyl-CLinDMA (2S), DODAC, DOTMA, DDAB, DOTAP, DOTAP.C1, DC-Choi, DOSPA, DOGS, DODAP, DODMA and DMRIE. For example, the cationic lipid can be SM102
在某些实施方式中,所述阳离子脂质在脂质纳米颗粒中的摩尔比例为约40-70%,例如,约40-65%、约40-60%、约45-55%或约48-53%。在某些实施方式中,所述阳离子脂质(例如,SM102)在脂质纳米颗粒中的摩尔比例为约50%。In certain embodiments, the molar proportion of the cationic lipid in the lipid nanoparticle is about 40-70%, for example, about 40-65%, about 40-60%, about 45-55%, or about 48 -53%. In certain embodiments, the molar proportion of the cationic lipid (eg, SM102) in the lipid nanoparticle is about 50%.
在本申请中,所述纳米脂质颗粒可包含一种或多种(例如1、2、3、4、5、6、7或8)非阳离子脂质。所述非阳离子脂质可以包括阴离子脂质。适用于本申请的脂质纳米颗粒的阴离子脂质可包括磷脂酰甘油、心磷脂、二酰基磷脂酰丝氨酸、二酰基磷脂酸、N-十二烷酰基磷脂酰乙醇胺、N-琥珀酰基磷脂酰乙醇胺、N-戊二酰基磷脂酰磷酸乙醇基,以及其他连接了阴离子基团的中性脂质。In this application, the nanolipid particles may comprise one or more ( eg 1, 2, 3, 4, 5, 6, 7 or 8) non-cationic lipids. The non-cationic lipids may include anionic lipids. Anionic lipids suitable for lipid nanoparticles of the present application may include phosphatidylglycerol, cardiolipin, diacylphosphatidylserine, diacylphosphatidic acid, N-lauroylphosphatidylethanolamine, N-succinylphosphatidylethanolamine , N-glutarylphosphatidylphosphoethanol group, and other neutral lipids to which anionic groups are attached.
所述非阳离子脂质可以包括中性脂质。适用于本申请的脂质纳米颗粒的中性脂质可包括磷脂,例如二硬脂酰基磷脂酰胆碱(DSPC)、二油酰基磷脂酰胆碱(DOPC)、二棕榈酰基磷脂酰胆碱(DPPC)、二油酰基磷脂酰甘油(DOPG)、二棕榈酰基磷脂酰甘油(DPPG)、二油酰基磷脂酰乙醇胺(DOPE)、棕榈酰基油酰基磷脂酰胆碱(POPC)、棕榈酰基油酰基-磷脂酰乙醇胺(POPE)、二油酰基-磷脂酰乙醇胺4-(N-马来酰亚胺基甲基)-环己烷-1-羧酸酯(DOPE- mal)、二棕榈酰基磷脂酰基乙醇胺(DPPE)、二肉豆蔻酰基磷酸乙醇胺(DMPE)、二硬脂酰基-磷脂酰基-乙醇胺(DSPE)、16-O-单甲基PE、16-O-二甲基PE、18-1-反式PE、1-硬脂酰基-2-油酰基-磷脂酰乙醇胺(SOPE),或其混合物。另外,可以使用具有饱和和不饱和脂肪酸链的混合物的脂质。例如,本申请所述的中性脂质可以选自DOPE、DSPC、DPPC、POPC或任何相关的磷脂酰胆碱。The non-cationic lipids may include neutral lipids. Neutral lipids suitable for lipid nanoparticles of the present application may include phospholipids, such as distearoylphosphatidylcholine (DSPC), dioleoylphosphatidylcholine (DOPC), dipalmitoylphosphatidylcholine ( DPPC), dioleoylphosphatidylglycerol (DOPG), dipalmitoylphosphatidylglycerol (DPPG), dioleoylphosphatidylethanolamine (DOPE), palmitoyloleoylphosphatidylcholine (POPC), palmitoyloleoyl- Phosphatidylethanolamine (POPE), dioleoyl-phosphatidylethanolamine 4-(N-maleimidomethyl)-cyclohexane-1-carboxylate (DOPE-mal), dipalmitoylphosphatidylethanolamine (DPPE), dimyristoylphosphoethanolamine (DMPE), distearoyl-phosphatidyl-ethanolamine (DSPE), 16-O-monomethylPE, 16-O-dimethylPE, 18-1-trans Formula PE, 1-stearoyl-2-oleoyl-phosphatidylethanolamine (SOPE), or mixtures thereof. Additionally, lipids having a mixture of saturated and unsaturated fatty acid chains can be used. For example, the neutral lipids described herein may be selected from DOPE, DSPC, DPPC, POPC or any related phosphatidylcholine.
在某些实施方式中,所述磷脂在脂质纳米颗粒中的摩尔比例为约30-45%,例如,约33-42%、约35-40%或约38-39%。在某些实施方式中,所述磷脂(例如,DSPC)在脂质纳米颗粒中的摩尔比例为约38.5%。In certain embodiments, the molar proportion of the phospholipid in the lipid nanoparticle is about 30-45%, for example, about 33-42%, about 35-40%, or about 38-39%. In certain embodiments, the molar proportion of the phospholipid (eg, DSPC) in the lipid nanoparticle is about 38.5%.
在本申请中,所述纳米脂质颗粒可包含脂质缀合物,例如,聚乙二醇(PEG)修饰的脂质和衍生的脂质。PEG修饰的脂质可包括但不限于与具有C6-C20长度的烷基链的脂质共价连接的长度至多为5kDa的聚乙二醇链。这些组分的加入可防止脂质聚集,也可增加循环持续时间,易于脂质-核酸组合物递送至靶细胞,或快速释放出核酸。例如,所述聚乙二醇(PEG)修饰的脂分子可以是具有较短的酰基链(例如,C14或C18)的PEG-神经酰胺。例如,所述纳米脂质颗粒可包含PEG2000-DMG。In the present application, the nanolipid particles may comprise lipid conjugates, for example, polyethylene glycol (PEG) modified lipids and derivatized lipids. PEG-modified lipids may include, but are not limited to, polyethylene glycol chains up to 5 kDa in length covalently linked to lipids having alkyl chains of C6-C20 length. The addition of these components can prevent lipid aggregation, increase circulation duration, facilitate delivery of lipid-nucleic acid compositions to target cells, or rapidly release nucleic acids. For example, the polyethylene glycol (PEG) modified lipid molecule can be a PEG-ceramide with a shorter acyl chain (eg, C14 or C18). For example, the nanolipid particles may comprise PEG2000-DMG.
在某些实施方式中,所述聚乙二醇(PEG)修饰的脂分子在脂质纳米颗粒中的摩尔比例为约0.5-2%,例如,约1-2%、约1.2-1.8%或约1.4-1.6%。在某些实施方式中,所述聚乙二醇(PEG)修饰的脂分子(例如,PEG2000-DMG)在脂质纳米颗粒中的摩尔比例为约1.5%。In certain embodiments, the molar proportion of polyethylene glycol (PEG)-modified lipid molecules in the lipid nanoparticles is about 0.5-2%, for example, about 1-2%, about 1.2-1.8%, or About 1.4-1.6%. In certain embodiments, the molar proportion of polyethylene glycol (PEG)-modified lipid molecules (eg, PEG2000-DMG) in the lipid nanoparticle is about 1.5%.
在本申请中,所述纳米脂质颗粒还可包含胆固醇。在某些实施方式中,所述胆固醇在脂质纳米颗粒中的摩尔比例为约5-15%,例如,约6-14%、约7-13%、约8-12%或约9-11%。在某些实施方式中,所述胆固醇在脂质纳米颗粒中的摩尔比例可以为约10%。In this application, the nanolipid particles may also contain cholesterol. In certain embodiments, the molar proportion of cholesterol in the lipid nanoparticle is about 5-15%, for example, about 6-14%, about 7-13%, about 8-12%, or about 9-11% %. In certain embodiments, the molar proportion of cholesterol in the lipid nanoparticle can be about 10%.
在本申请中,所述纳米脂质颗粒可包括阳离子脂质、胆固醇、磷脂以及聚乙二醇修饰的脂分子。在某些实施方式中,所述阳离子脂质、胆固醇、磷脂以及聚乙二醇修饰的脂分子的摩尔比可以为45~55:5~15:35~45:0.5~2。在某些实施方式中,所述阳离子脂质、胆固醇、磷脂以及聚乙二醇修饰的脂分子的摩尔比可以为50:10:38.5:1.5。In this application, the nanolipid particles may include cationic lipids, cholesterol, phospholipids, and polyethylene glycol-modified lipid molecules. In certain embodiments, the molar ratio of the cationic lipid, cholesterol, phospholipid and polyethylene glycol-modified lipid molecules may be 45-55:5-15:35-45:0.5-2. In certain embodiments, the molar ratio of the cationic lipid, cholesterol, phospholipid, and polyethylene glycol-modified lipid molecules may be 50:10:38.5:1.5.
另一方面,本申请提供了载体,所述载体包含所述核酸分子。例如,所述载体可以为病毒载体,例如,腺病毒载体、腺相关病毒载体和/或慢病毒载体。In another aspect, the application provides a vector comprising the nucleic acid molecule. For example, the vector may be a viral vector, such as an adenoviral vector, an adeno-associated viral vector, and/or a lentiviral vector.
另一方面,本申请提供了细胞,所述细胞包含所述核酸分子,和/或所述载体。在本申请中,所述细胞可以是原核细胞,例如,大肠杆菌。在本申请中,所述细胞可以是真核细胞例如酵母细胞,昆虫细胞,植物细胞和动物细胞。在本申请中,所述细胞可以为哺乳动物的细胞,例如小鼠细胞、人细胞等。In another aspect, the application provides cells comprising said nucleic acid molecule, and/or said vector. In this application, the cell may be a prokaryotic cell, for example, E. coli. In this application, the cells may be eukaryotic cells such as yeast cells, insect cells, plant cells and animal cells. In this application, the cells may be mammalian cells, such as mouse cells, human cells, etc.
另一方面,本申请提供了制备所述S蛋白变体的方法,所述方法包括在使得所述S蛋白变体表达的条件下,培养所述细胞。In another aspect, the present application provides a method of preparing the S protein variant, the method comprising culturing the cell under conditions such that the S protein variant is expressed.
另一方面,本申请提供了药物组合物,所述药物组合物包含所述S蛋白变体、所述核酸分子、所述载体、所述细胞和/或所述组合物,以及任选地药学上可接受的载体。In another aspect, the application provides a pharmaceutical composition comprising the S protein variant, the nucleic acid molecule, the vector, the cell and/or the composition, and optionally a pharmaceutical acceptable carrier.
另一方面,本申请提供了疫苗,所述疫苗包含所述S蛋白变体、所述核酸分子、所述载体、所述细胞、所述组合物和/或所述药物组合物,以及药学上可接受的佐剂。On the other hand, the present application provides a vaccine comprising the S protein variant, the nucleic acid molecule, the vector, the cell, the composition and/or the pharmaceutical composition, and a pharmaceutical Acceptable adjuvants.
在本申请中,所述疫苗可以为蛋白疫苗,其可以包含所述S蛋白变体。In this application, the vaccine may be a protein vaccine, which may comprise the S protein variant.
在本申请中,所述疫苗可以为核酸疫苗,其可以包含所述核酸分子。在本申请中,所述疫苗可以为DNA疫苗。在本申请中,所述疫苗可以为mRNA疫苗。In this application, the vaccine may be a nucleic acid vaccine, which may include the nucleic acid molecule. In this application, the vaccine may be a DNA vaccine. In this application, the vaccine may be an mRNA vaccine.
另一方面,本申请提供了试剂盒,所述试剂盒包含所述S蛋白变体、所述核酸分子、所述载体、所述细胞、所述合物、所述药物组合物和/或所述疫苗。On the other hand, the present application provides a kit comprising the S protein variant, the nucleic acid molecule, the vector, the cell, the compound, the pharmaceutical composition and/or the Describe vaccines.
另一方面,本申请提供了所述S蛋白变体、所述核酸分子、所述载体、所述细胞、所述组合物、所述药物组合物和/或所述疫苗在制备药物中的用途,所述药物用于缓解、预防和/或治疗冠状病毒引起的疾病。On the other hand, the application provides the use of the S protein variant, the nucleic acid molecule, the vector, the cell, the composition, the pharmaceutical composition and/or the vaccine in the preparation of medicines , the drug is used to alleviate, prevent and/or treat diseases caused by coronavirus.
另一方面,本申请提供了缓解、预防和/或治疗冠状病毒引起的疾病或病症的方法,所述方法包括向有需要的受试者施用所述S蛋白变体、所述核酸分子、所述载体、所述细胞、所述组合物、所述药物组合物和/或所述疫苗。In another aspect, the present application provides a method of alleviating, preventing and/or treating a disease or condition caused by coronavirus, the method comprising administering the S protein variant, the nucleic acid molecule, the the vector, the cell, the composition, the pharmaceutical composition and/or the vaccine.
在本申请中,所述疾病或病症可以为新型冠状病毒肺炎(COVID-19)和/或重症急性呼吸综合征(SARS)。In this application, the disease or condition may be novel coronavirus pneumonia (COVID-19) and/or severe acute respiratory syndrome (SARS).
另一方面,本申请提供了产生针对冠状病毒抗体的方法,所述方法包括施用所述S蛋白变体、所述核酸分子、所述的载体、所述细胞、所述组合物、所述药物组合物和/或所述疫苗。On the other hand, the present application provides a method for producing antibodies against coronavirus, the method comprising administering the S protein variant, the nucleic acid molecule, the vector, the cell, the composition, the drug compositions and/or said vaccines.
另一方面,本申请提供了激活免疫的方法,所述方法包括施用所述S蛋白变体、所述核酸分子、所述载体、所述细胞、所述组合物、所述药物组合物和/或所述疫苗。In another aspect, the application provides a method of activating immunity, the method comprising administering the S protein variant, the nucleic acid molecule, the vector, the cell, the composition, the pharmaceutical composition and/or or said vaccine.
在本申请中,所述S蛋白变体、所述核酸分子、所述载体、所述细胞、所述组合物、所述药物组合物和/或所述疫苗可以被单次施用、多次施用或连续施用,并且均具有安全性。在首次施用后,再次施用所述组合物和/或药物组合物可以缩短起效时间。在本申请中,所述S蛋白变体、所述核酸分子、所述载体、所述细胞、所述组合物、所述药物组合物和/或所述疫苗可以和其他活性物质或治疗/预防成分共同施用。在本申请中,所述S蛋白变体、所述核酸分子、所述载体、所述细胞、所述组合物、所述药物组合物和/或所述疫苗可以在其他活性物质或治疗/预防成分之前或之后施用。In this application, the S protein variant, the nucleic acid molecule, the vector, the cell, the composition, the pharmaceutical composition and/or the vaccine can be administered once or multiple times. or continuous administration, and both are safe. After the initial administration, subsequent administration of the composition and/or pharmaceutical composition may shorten the onset of action. In this application, the S protein variant, the nucleic acid molecule, the vector, the cell, the composition, the pharmaceutical composition and/or the vaccine can be combined with other active substances or treatment/prevention Ingredients are co-administered. In this application, the S protein variant, the nucleic acid molecule, the vector, the cell, the composition, the pharmaceutical composition and/or the vaccine can be used in other active substances or treatments/preventions. before or after the ingredients are applied.
本申请还公开了以下具体实施方式:This application also discloses the following specific implementation modes:
1.S蛋白变体,与野生型冠状病毒的S蛋白相比,其不包含完整的细胞质尾巴结构域。1. S protein variant, compared with the S protein of wild-type coronavirus, it does not contain a complete cytoplasmic tail domain.
2.根据实施方式1所述的S蛋白变体,与野生型冠状病毒的S蛋白相比,其包含截短的细胞质尾巴结构域。2. The S protein variant according to embodiment 1, which contains a truncated cytoplasmic tail domain compared with the S protein of wild-type coronavirus.
3.根据实施方式1-2中任一项所述的S蛋白变体,与野生型冠状病毒的S蛋白相比,其在C末端截短了18-20个氨基酸。3. The S protein variant according to any one of embodiments 1-2, which has 18-20 amino acids truncated at the C-terminus compared with the S protein of wild-type coronavirus.
4.根据实施方式3所述的S蛋白变体,与野生型冠状病毒的S蛋白相比,其在C末端截短了18个氨基酸。4. The S protein variant according to embodiment 3, which has 18 amino acids truncated at the C-terminus compared with the S protein of wild-type coronavirus.
5.根据实施方式1所述的S蛋白变体,与野生型冠状病毒的S蛋白相比,其不包含细胞质尾巴结构域。5. The S protein variant according to embodiment 1, which does not include a cytoplasmic tail domain compared with the S protein of wild-type coronavirus.
6.根据实施方式5所述的S蛋白变体,与野生型冠状病毒的S蛋白相比,其不包含跨膜域。6. The S protein variant according to embodiment 5, which does not include a transmembrane domain compared with the S protein of wild-type coronavirus.
7.根据实施方式5-6中任一项所述的S蛋白变体,与野生型冠状病毒的S蛋白相比,其在C末端截短了22-64个氨基酸。7. The S protein variant according to any one of embodiments 5-6, which has 22-64 amino acids truncated at the C-terminus compared with the S protein of wild-type coronavirus.
8.根据实施方式1-7中任一项所述的S蛋白变体,其中所述冠状病毒为MERS冠状病毒和/或SARS-CoV类病毒。8. The S protein variant according to any one of embodiments 1-7, wherein the coronavirus is a MERS coronavirus and/or a SARS-CoV-like virus.
9.根据实施方式1-8中任一项所述的S蛋白变体,其中所述冠状病毒为SARS-CoV-2病毒。9. The S protein variant according to any one of embodiments 1-8, wherein the coronavirus is a SARS-CoV-2 virus.
10.根据实施方式1-9中任一项所述的S蛋白变体,其中所述野生型冠状病毒的S蛋白的细胞质尾巴结构域包含SEQ ID NO:48-49中任一项所示的氨基酸序列。10. The S protein variant according to any one of embodiments 1-9, wherein the cytoplasmic tail domain of the S protein of the wild-type coronavirus comprises the S protein variant shown in any one of SEQ ID NO: 48-49 Amino acid sequence.
11.根据实施方式6-10中任一项所述的S蛋白变体,其中所述野生型冠状病毒的S蛋白的跨膜域包含SEQ ID NO:50-51中任一项所示的氨基酸序列。11. The S protein variant according to any one of embodiments 6-10, wherein the transmembrane domain of the S protein of the wild-type coronavirus comprises the amino acid shown in any one of SEQ ID NO: 50-51 sequence.
12.根据实施方式1-11中任一项所述的S蛋白变体,其中所述野生型冠状病毒的S蛋白包含SEQ ID NO:5、34和44中任一项所示的氨基酸序列。12. The S protein variant according to any one of embodiments 1-11, wherein the S protein of the wild-type coronavirus comprises the amino acid sequence shown in any one of SEQ ID NO: 5, 34 and 44.
13.根据实施方式1-12中任一项所述的S蛋白变体,其包含SEQ ID NO:8、21、24、27、30、33、35、38、41、45、59和61中任一项所示的氨基酸序列。13. The S protein variant according to any one of embodiments 1-12, comprising SEQ ID NO:8, 21, 24, 27, 30, 33, 35, 38, 41, 45, 59 and 61 The amino acid sequence shown in any one.
14.根据实施方式1-13中任一项所述的S蛋白变体,其包含SEQ ID NO:8所示的氨基酸序列。14. The S protein variant according to any one of embodiments 1-13, which comprises the amino acid sequence shown in SEQ ID NO:8.
15.根据实施方式1-14中任一项所述的S蛋白变体,其还包括信号肽,且所述信号肽位于所述S蛋白变体的N末端。15. The S protein variant according to any one of embodiments 1-14, further comprising a signal peptide, and the signal peptide is located at the N-terminus of the S protein variant.
16.根据实施方式15所述的S蛋白变体,其中所述信号肽包含SEQ ID NO:1-2中任一项所示的氨基酸序列。16. The S protein variant according to embodiment 15, wherein the signal peptide comprises the amino acid sequence shown in any one of SEQ ID NO: 1-2.
17.分离的核酸分子,其包含编码实施方式1-16中任一项所述的S蛋白变体的多核苷酸。17. An isolated nucleic acid molecule comprising a polynucleotide encoding the S protein variant of any one of embodiments 1-16.
18.根据实施方式17所述的核酸分子,其为DNA。18. The nucleic acid molecule of embodiment 17, which is DNA.
19.根据实施方式17-18中任一项所述的核酸分子,其包含SEQ ID NO:6、9-19、22、25、28、31、36、39、42、46、60、62和63中任一项所述的核苷酸序列。19. The nucleic acid molecule according to any one of embodiments 17-18, comprising SEQ ID NOs: 6, 9-19, 22, 25, 28, 31, 36, 39, 42, 46, 60, 62 and The nucleotide sequence described in any one of 63.
20.根据实施方式17所述的核酸分子,其为mRNA。20. The nucleic acid molecule of embodiment 17, which is mRNA.
21.根据实施方式20所述的核酸分子,其在选自下组的一个或多个位置处包含修饰:5’帽、5’非翻译区、开放阅读框、3’非翻译区和3’聚腺苷酸。21. The nucleic acid molecule of embodiment 20, comprising modifications at one or more positions selected from the group consisting of: 5' cap, 5' untranslated region, open reading frame, 3' untranslated region, and 3' poly(A).
22.根据实施方式20-21中任一项所述的核酸分子,其包含至少一种经修饰的核苷酸。22. The nucleic acid molecule of any one of embodiments 20-21, comprising at least one modified nucleotide.
23.根据实施方式20-22中任一项所述的核酸分子,其为密码子优化的。23. The nucleic acid molecule of any one of embodiments 20-22, which is codon optimized.
24.根据实施方式20-23中任一项所述的核酸分子,其包含SEQ ID NO:7、20、23、26、29、32、37、40、43和47中任一项所示的核苷酸序列。24. The nucleic acid molecule according to any one of embodiments 20-23, which comprises SEQ ID NO:7, 20, 23, 26, 29, 32, 37, 40, 43 and 47. Nucleotide sequence.
25.载体,其包含实施方式17-24中任一项所述的核酸分子。25. A vector comprising the nucleic acid molecule of any one of embodiments 17-24.
26.细胞,其包含实施方式17-24中任一项所述的核酸分子,和/或实施方式25所述的载体。26. A cell comprising the nucleic acid molecule of any one of embodiments 17-24, and/or the vector of embodiment 25.
27.制备实施方式1-16中任一项所述的S蛋白变体的方法,所述方法包括在使得实施方式1-16中任一项所述的S蛋白变体表达的条件下,培养根据实施方式26所述的细胞。27. A method for preparing the S protein variant according to any one of embodiments 1-16, the method comprising culturing under conditions such that the S protein variant according to any one of embodiments 1-16 is expressed. The cell according to embodiment 26.
28.组合物,其包含(1)编码实施方式1-16中任一项所述的S蛋白变体的mRNA,和(2)递送载体。28. A composition comprising (1) an mRNA encoding the S protein variant of any one of embodiments 1-16, and (2) a delivery vector.
29.根据实施方式28所述的组合物,其中所述mRNA在选自下组的一个或多个位置处包含修饰:5’帽、5’非翻译区、开放阅读框、3’非翻译区和poly A尾。29. The composition of embodiment 28, wherein the mRNA comprises modifications at one or more positions selected from the group consisting of: 5' cap, 5' untranslated region, open reading frame, 3' untranslated region and poly A tail.
30.根据实施方式28-29中任一项所述的组合物,其中所述mRNA包含至少一种经修饰的核苷酸。30. The composition of any one of embodiments 28-29, wherein the mRNA comprises at least one modified nucleotide.
31.根据实施方式28-30中任一项所述的组合物,其中所述mRNA包含的经修饰的核苷酸为假尿苷(Ψ)。31. The composition of any one of embodiments 28-30, wherein the mRNA comprises a modified nucleotide that is pseudouridine (Ψ).
32.根据实施方式28-31中任一项所述的组合物,其中所述mRNA是密码子优化的。32. The composition of any one of embodiments 28-31, wherein the mRNA is codon optimized.
33.根据实施方式28-32中任一项所述的组合物,其中所述mRNA包含如SEQ ID NO:7、20、23、26、29、32、37、40、43和47中任一项所示的核苷酸序列。33. The composition according to any one of embodiments 28-32, wherein the mRNA comprises any one of SEQ ID NOs: 7, 20, 23, 26, 29, 32, 37, 40, 43 and 47 The nucleotide sequence shown in the item.
34.根据实施方式28-32中任一项所述的组合物,其中所述S蛋白变体源自SARS CoV-2 病毒。34. The composition of any one of embodiments 28-32, wherein the S protein variant is derived from the SARS CoV-2 virus.
35.根据实施方式28-32中任一项所述的组合物,其中所述mRNA包含如SEQ ID NO:7所示的核苷酸序列。35. The composition according to any one of embodiments 28-32, wherein the mRNA comprises the nucleotide sequence shown in SEQ ID NO:7.
36.根据实施方式28-35中任一项所述的组合物,其中所述递送载体包括脂质体。36. The composition of any one of embodiments 28-35, wherein the delivery vehicle comprises liposomes.
37.根据实施方式28-36中任一项所述的组合物,其中所述递送载体包括脂质纳米颗粒(LNP)。37. The composition of any one of embodiments 28-36, wherein the delivery vehicle comprises lipid nanoparticles (LNP).
38.根据实施方式28-37中任一项所述的组合物,其中所述递送载体包括阳离子脂质。38. The composition of any one of embodiments 28-37, wherein the delivery vehicle comprises a cationic lipid.
39.根据实施方式38所述的组合物,在所述递送载体中,其中所述阳离子脂质的摩尔比为约45%至约55%。39. The composition of embodiment 38, wherein the molar ratio of the cationic lipid in the delivery vehicle is from about 45% to about 55%.
40.根据实施方式38或39所述的组合物,其中所述阳离子脂质包括SM102和/或Dlin-MC3。40. The composition of embodiment 38 or 39, wherein the cationic lipid comprises SM102 and/or Dlin-MC3.
41.根据实施方式28-40中任一项所述的组合物,其中所述递送载体包括非阳离子脂质。41. The composition of any one of embodiments 28-40, wherein the delivery vehicle comprises a non-cationic lipid.
42.根据实施方式41所述的组合物,其中所述非阳离子脂质包括磷脂和/或脂质缀合物。42. The composition of embodiment 41, wherein the non-cationic lipids comprise phospholipids and/or lipid conjugates.
43.根据实施方式42所述的组合物,其中所述磷脂包括二硬脂酰基磷脂酰胆碱(DSPC)。43. The composition of embodiment 42, wherein the phospholipid comprises distearoylphosphatidylcholine (DSPC).
44.根据实施方式42或43所述的组合物,在所述递送载体中,其中所述磷脂的摩尔比为约35%至约40%。44. The composition of embodiment 42 or 43, in the delivery vehicle, wherein the molar ratio of the phospholipids is from about 35% to about 40%.
45.根据实施方式42-44中任一项所述的组合物,其中所述脂质缀合物包括聚乙二醇修饰的脂分子。45. The composition of any one of embodiments 42-44, wherein the lipid conjugate comprises a polyethylene glycol modified lipid molecule.
46.根据实施方式42-45中任一项所述的组合物,在所述递送载体中,其中所述脂质缀合物的摩尔比为约1%至约2%。46. The composition of any one of embodiments 42-45, in the delivery vehicle, wherein the molar ratio of the lipid conjugate is from about 1% to about 2%.
47.根据实施方式45-46中任一项所述的组合物,其中所述聚乙二醇修饰的脂分子包括DMPE-PEG2000。47. The composition of any one of embodiments 45-46, wherein the polyethylene glycol modified lipid molecule comprises DMPE-PEG2000.
48.根据实施方式28-47中任一项所述的组合物,其中所述递送载体包括胆固醇。48. The composition of any one of embodiments 28-47, wherein the delivery vehicle includes cholesterol.
49.根据实施方式48所述的组合物,在所述递送载体中,其中所述胆固醇的摩尔比为约8%至约12%。49. The composition of embodiment 48, wherein the molar ratio of cholesterol in the delivery vehicle is from about 8% to about 12%.
50.根据实施方式28-49中任一项所述的组合物,其中所述递送载体包含阳离子脂质、胆固醇、磷脂和脂质缀合物,且所述阳离子脂质、胆固醇、磷脂和脂质缀合物的质量比为50:10:38.5:1.5。50. The composition of any one of embodiments 28-49, wherein the delivery vehicle comprises a cationic lipid, cholesterol, phospholipid, and lipid conjugate, and the cationic lipid, cholesterol, phospholipid, and lipid conjugate The mass ratio of the conjugate is 50:10:38.5:1.5.
51.根据实施方式28-50中任一项所述的组合物,其中所述递送载体包含SM102、胆固醇、DSPC和DMPE-PEG2000,且所述SM102、胆固醇、DSPC和DMPE-PEG2000的质量比 为50:10:38.5:1.5。51. The composition according to any one of embodiments 28-50, wherein the delivery vehicle comprises SM102, cholesterol, DSPC and DMPE-PEG2000, and the mass ratio of SM102, cholesterol, DSPC and DMPE-PEG2000 is 50:10:38.5:1.5.
52.根据实施方式28-51中任一项所述的组合物,其中所述mRNA包载在所述递送载体中。52. The composition of any one of embodiments 28-51, wherein said mRNA is encapsulated in said delivery vehicle.
53.药物组合物,其包含实施方式1-16中任一项所述的S蛋白变体、实施方式17-24中任一项所述的核酸分子、实施方式25所述的载体、实施方式26所述的细胞和/或实施方式28-52中任一项所述的组合物,以及任选地药学上可接受的载体。53. A pharmaceutical composition comprising the S protein variant according to any one of embodiments 1-16, the nucleic acid molecule according to any one of embodiments 17-24, the vector according to embodiment 25, and the embodiment 26 and/or the composition of any one of embodiments 28-52, and optionally a pharmaceutically acceptable carrier.
54.疫苗,其包含实施方式1-16中任一项所述的S蛋白变体、实施方式17-24中任一项所述的核酸分子、实施方式25所述的载体、实施方式26所述的细胞、实施方式28-52中任一项所述的组合物和/或实施方式53所述的药物组合物,以及药学上可接受的佐剂。54. A vaccine comprising the S protein variant according to any one of embodiments 1-16, the nucleic acid molecule according to any one of embodiments 17-24, the vector according to embodiment 25, and the vector according to embodiment 26. The cells described above, the composition described in any one of embodiments 28-52 and/or the pharmaceutical composition described in embodiment 53, and a pharmaceutically acceptable adjuvant.
55.根据实施方式54所述的疫苗,其为蛋白疫苗。55. The vaccine of embodiment 54, which is a protein vaccine.
56.根据实施方式54所述的疫苗,其为核酸疫苗。56. The vaccine according to embodiment 54, which is a nucleic acid vaccine.
57.根据实施方式56所述的疫苗,其为DNA疫苗。57. The vaccine of embodiment 56, which is a DNA vaccine.
58.根据实施方式56所述的疫苗,其为mRNA疫苗。58. The vaccine of embodiment 56, which is an mRNA vaccine.
59.试剂盒,包含实施方式1-16中任一项所述的S蛋白变体、实施方式17-24中任一项所述的核酸分子、实施方式25所述的载体、实施方式26所述的细胞、实施方式28-52中任一项所述的组合物、实施方式53所述的药物组合物和/或实施方式54-58中任一项所述的疫苗。59. Kit, comprising the S protein variant according to any one of embodiments 1-16, the nucleic acid molecule according to any one of embodiments 17-24, the vector according to embodiment 25, and the vector according to embodiment 26. The cells described above, the composition described in any one of embodiments 28-52, the pharmaceutical composition described in embodiment 53, and/or the vaccine described in any one of embodiments 54-58.
60.实施方式1-16中任一项所述的S蛋白变体、实施方式17-24中任一项所述的核酸分子、实施方式25所述的载体、实施方式26所述的细胞、实施方式28-52中任一项所述的组合物、实施方式53所述的药物组合物和/或实施方式54-58中任一项所述的疫苗在制备药物中的用途,所述药物用于缓解、预防和/或治疗冠状病毒引起的疾病。60. The S protein variant according to any one of embodiments 1-16, the nucleic acid molecule according to any one of embodiments 17-24, the vector according to embodiment 25, the cell according to embodiment 26, The use of the composition described in any one of embodiments 28-52, the pharmaceutical composition described in embodiment 53, and/or the vaccine described in any one of embodiments 54-58 in the preparation of a medicine, the medicine For use in mitigating, preventing, and/or treating illness caused by coronavirus.
61.根据实施方式60所述的用途,其中所述疾病或病症为新型冠状病毒肺炎(COVID-19)和/或重症急性呼吸综合征(SARS)。61. Use according to embodiment 60, wherein the disease or condition is novel coronavirus pneumonia (COVID-19) and/or severe acute respiratory syndrome (SARS).
62.缓解、预防和/或治疗冠状病毒引起的疾病或病症的方法,所述方法包括向有需要的受试者施用实施方式1-16中任一项所述的S蛋白变体、实施方式17-24中任一项所述的核酸分子、实施方式25所述的载体、实施方式26所述的细胞、实施方式28-52中任一项所述的组合物、实施方式53所述的药物组合物和/或实施方式54-58中任一项所述的疫苗。62. A method of alleviating, preventing and/or treating a disease or condition caused by coronavirus, the method comprising administering to a subject in need thereof the S protein variant of any one of embodiments 1-16, embodiment The nucleic acid molecule described in any one of 17-24, the vector described in embodiment 25, the cell described in embodiment 26, the composition described in any one of embodiments 28-52, the vector described in embodiment 53 Pharmaceutical compositions and/or vaccines according to any of embodiments 54-58.
63.根据实施方式62所述的用途,其中所述疾病或病症为新型冠状病毒肺炎(COVID-19)和/或重症急性呼吸综合征(SARS)。63. Use according to embodiment 62, wherein the disease or condition is novel coronavirus pneumonia (COVID-19) and/or severe acute respiratory syndrome (SARS).
64.产生针对冠状病毒抗体的方法,其包括施用实施方式1-16中任一项所述的S蛋白变 体、实施方式17-24中任一项所述的核酸分子、实施方式25所述的载体、实施方式26所述的细胞、实施方式28-52中任一项所述的组合物、实施方式53所述的药物组合物和/或实施方式54-58中任一项所述的疫苗。64. A method of producing antibodies against coronavirus, comprising administering the S protein variant described in any one of embodiments 1-16, the nucleic acid molecule described in any one of embodiments 17-24, or the method described in embodiment 25 The vector, the cell described in Embodiment 26, the composition described in any one of Embodiments 28-52, the pharmaceutical composition described in Embodiment 53, and/or the method described in any one of Embodiments 54-58 vaccine.
65.激活免疫的方法,其包括施用实施方式1-16中任一项所述的S蛋白变体、实施方式17-24中任一项所述的核酸分子、实施方式25所述的载体、实施方式26所述的细胞、实施方式28-52中任一项所述的组合物、实施方式53所述的药物组合物和/或实施方式54-58中任一项所述的疫苗。65. A method of activating immunity, comprising administering the S protein variant of any one of embodiments 1-16, the nucleic acid molecule of any one of embodiments 17-24, the vector of embodiment 25, The cell of embodiment 26, the composition of any one of embodiments 28-52, the pharmaceutical composition of embodiment 53, and/or the vaccine of any one of embodiments 54-58.
本申请还公开了以下具体实施方式:This application also discloses the following specific implementation modes:
1.S蛋白变体,与野生型冠状病毒的S蛋白相比,其不包含完整的细胞质尾巴结构域。1. S protein variant, compared with the S protein of wild-type coronavirus, it does not contain a complete cytoplasmic tail domain.
2.根据实施方式1所述的S蛋白变体,与野生型冠状病毒的S蛋白相比,其包含截短的细胞质尾巴结构域。2. The S protein variant according to embodiment 1, which contains a truncated cytoplasmic tail domain compared with the S protein of wild-type coronavirus.
3.根据实施方式1-2中任一项所述的S蛋白变体,与野生型冠状病毒的S蛋白相比,其在C末端截短了18-20个氨基酸。3. The S protein variant according to any one of embodiments 1-2, which has 18-20 amino acids truncated at the C-terminus compared with the S protein of wild-type coronavirus.
4.根据实施方式3所述的S蛋白变体,与野生型冠状病毒的S蛋白相比,其在C末端截短了18个氨基酸。4. The S protein variant according to embodiment 3, which has 18 amino acids truncated at the C-terminus compared with the S protein of wild-type coronavirus.
5.根据实施方式1所述的S蛋白变体,与野生型冠状病毒的S蛋白相比,其不包含细胞质尾巴结构域。5. The S protein variant according to embodiment 1, which does not include a cytoplasmic tail domain compared with the S protein of wild-type coronavirus.
6.根据实施方式5所述的S蛋白变体,与野生型冠状病毒的S蛋白相比,其不包含跨膜域。6. The S protein variant according to embodiment 5, which does not include a transmembrane domain compared with the S protein of wild-type coronavirus.
7.根据实施方式5-6中任一项所述的S蛋白变体,与野生型冠状病毒的S蛋白相比,其在C末端截短了22-64个氨基酸。7. The S protein variant according to any one of embodiments 5-6, which has 22-64 amino acids truncated at the C-terminus compared with the S protein of wild-type coronavirus.
8.根据实施方式1-7中任一项所述的S蛋白变体,其中所述冠状病毒为MERS冠状病毒和/或SARS-CoV类病毒。8. The S protein variant according to any one of embodiments 1-7, wherein the coronavirus is a MERS coronavirus and/or a SARS-CoV-like virus.
9.根据实施方式1-8中任一项所述的S蛋白变体,其中所述冠状病毒为SARS-CoV-2病毒。9. The S protein variant according to any one of embodiments 1-8, wherein the coronavirus is a SARS-CoV-2 virus.
10.根据实施方式1-9中任一项所述的S蛋白变体,其中所述野生型冠状病毒的S蛋白的细胞质尾巴结构域包含SEQ ID NO:48-49中任一项所示的氨基酸序列。10. The S protein variant according to any one of embodiments 1-9, wherein the cytoplasmic tail domain of the S protein of the wild-type coronavirus comprises the S protein variant shown in any one of SEQ ID NO: 48-49 Amino acid sequence.
11.根据实施方式6-10中任一项所述的S蛋白变体,其中所述野生型冠状病毒的S蛋白的跨膜域包含SEQ ID NO:50-51中任一项所示的氨基酸序列。11. The S protein variant according to any one of embodiments 6-10, wherein the transmembrane domain of the S protein of the wild-type coronavirus comprises the amino acid shown in any one of SEQ ID NO: 50-51 sequence.
12.根据实施方式1-11中任一项所述的S蛋白变体,其中所述野生型冠状病毒的S蛋白 包含SEQ ID NO:5、34和44中任一项所示的氨基酸序列。12. The S protein variant according to any one of embodiments 1-11, wherein the S protein of the wild-type coronavirus comprises the amino acid sequence shown in any one of SEQ ID NO: 5, 34 and 44.
13.根据实施方式1-12中任一项所述的S蛋白变体,其包含SEQ ID NO:38、41和59中任一项所示的氨基酸序列。13. The S protein variant according to any one of embodiments 1-12, which comprises the amino acid sequence shown in any one of SEQ ID NO: 38, 41 and 59.
14.根据实施方式1-13中任一项所述的S蛋白变体,其包含SEQ ID NO:8所示的氨基酸序列。14. The S protein variant according to any one of embodiments 1-13, which comprises the amino acid sequence shown in SEQ ID NO:8.
15.根据实施方式1-14中任一项所述的S蛋白变体,其还包括信号肽,且所述信号肽位于所述S蛋白变体的N末端。15. The S protein variant according to any one of embodiments 1-14, further comprising a signal peptide, and the signal peptide is located at the N-terminus of the S protein variant.
16.根据实施方式15所述的S蛋白变体,其中所述信号肽包含SEQ ID NO:1、2和68中任一项所示的氨基酸序列。16. The S protein variant according to embodiment 15, wherein the signal peptide comprises the amino acid sequence shown in any one of SEQ ID NO: 1, 2 and 68.
17.分离的核酸分子,其包含编码实施方式1-16中任一项所述的S蛋白变体的多核苷酸。17. An isolated nucleic acid molecule comprising a polynucleotide encoding the S protein variant of any one of embodiments 1-16.
18.根据实施方式17所述的核酸分子,其为DNA。18. The nucleic acid molecule of embodiment 17, which is DNA.
19.根据实施方式17-18中任一项所述的核酸分子,其包含SEQ ID NO:17、19、22、25、28、31、36、39、42、46、60、62和63中任一项所述的核苷酸序列。19. The nucleic acid molecule according to any one of embodiments 17-18, comprising SEQ ID NO: 17, 19, 22, 25, 28, 31, 36, 39, 42, 46, 60, 62 and 63 The nucleotide sequence of any one.
20.根据实施方式17所述的核酸分子,其为mRNA。20. The nucleic acid molecule of embodiment 17, which is mRNA.
21.根据实施方式20所述的核酸分子,其在选自下组的一个或多个位置处包含修饰:5’帽、5’非翻译区、开放阅读框、3’非翻译区和3’聚腺苷酸。21. The nucleic acid molecule of embodiment 20, comprising modifications at one or more positions selected from the group consisting of: 5' cap, 5' untranslated region, open reading frame, 3' untranslated region, and 3' poly(A).
22.根据实施方式20-21中任一项所述的核酸分子,其包含至少一种经修饰的核苷酸。22. The nucleic acid molecule of any one of embodiments 20-21, comprising at least one modified nucleotide.
23.根据实施方式20-22中任一项所述的核酸分子,其为密码子优化的。23. The nucleic acid molecule of any one of embodiments 20-22, which is codon optimized.
24.根据实施方式20-23中任一项所述的核酸分子,其包含SEQ ID NO:7、20、23、26、29、32、37、40、43和47中任一项所示的核苷酸序列。24. The nucleic acid molecule according to any one of embodiments 20-23, which comprises SEQ ID NO:7, 20, 23, 26, 29, 32, 37, 40, 43 and 47. Nucleotide sequence.
25.载体,其包含实施方式17-24中任一项所述的核酸分子。25. A vector comprising the nucleic acid molecule of any one of embodiments 17-24.
26.细胞,其包含实施方式17-24中任一项所述的核酸分子,和/或实施方式25所述的载体。26. A cell comprising the nucleic acid molecule of any one of embodiments 17-24, and/or the vector of embodiment 25.
27.制备实施方式1-16中任一项所述的S蛋白变体的方法,所述方法包括在使得实施方式1-16中任一项所述的S蛋白变体表达的条件下,培养根据实施方式26所述的细胞。27. A method for preparing the S protein variant according to any one of embodiments 1-16, the method comprising culturing under conditions such that the S protein variant according to any one of embodiments 1-16 is expressed. The cell according to embodiment 26.
28.组合物,其包含(1)编码实施方式1-16中任一项所述的S蛋白变体的mRNA,和(2)递送载体。28. A composition comprising (1) an mRNA encoding the S protein variant of any one of embodiments 1-16, and (2) a delivery vector.
29.根据实施方式28所述的组合物,其中所述mRNA在选自下组的一个或多个位置处包含修饰:5’帽、5’非翻译区、开放阅读框、3’非翻译区和poly A尾。29. The composition of embodiment 28, wherein the mRNA comprises modifications at one or more positions selected from the group consisting of: 5' cap, 5' untranslated region, open reading frame, 3' untranslated region and poly A tail.
30.根据实施方式28-29中任一项所述的组合物,其中所述mRNA包含至少一种经修饰 的核苷酸。30. The composition of any one of embodiments 28-29, wherein the mRNA comprises at least one modified nucleotide.
31.根据实施方式28-30中任一项所述的组合物,其中所述mRNA包含的经修饰的核苷酸为假尿苷(Ψ)。31. The composition of any one of embodiments 28-30, wherein the mRNA comprises a modified nucleotide that is pseudouridine (Ψ).
32.根据实施方式28-31中任一项所述的组合物,其中所述mRNA是密码子优化的。32. The composition of any one of embodiments 28-31, wherein the mRNA is codon optimized.
33.根据实施方式28-32中任一项所述的组合物,其中所述mRNA包含如SEQ ID NO:7、20、23、26、29、32、37、40、43和47中任一项所示的核苷酸序列。33. The composition according to any one of embodiments 28-32, wherein the mRNA comprises any one of SEQ ID NOs: 7, 20, 23, 26, 29, 32, 37, 40, 43 and 47 The nucleotide sequence shown in the item.
34.根据实施方式28-32中任一项所述的组合物,其中所述S蛋白变体源自SARS CoV-2病毒。34. The composition of any one of embodiments 28-32, wherein the S protein variant is derived from the SARS CoV-2 virus.
35.根据实施方式28-32中任一项所述的组合物,其中所述mRNA包含如SEQ ID NO:7所示的核苷酸序列。35. The composition according to any one of embodiments 28-32, wherein the mRNA comprises the nucleotide sequence shown in SEQ ID NO:7.
36.根据实施方式28-35中任一项所述的组合物,其中所述递送载体包括脂质体。36. The composition of any one of embodiments 28-35, wherein the delivery vehicle comprises liposomes.
37.根据实施方式28-36中任一项所述的组合物,其中所述递送载体包括脂质纳米颗粒(LNP)。37. The composition of any one of embodiments 28-36, wherein the delivery vehicle comprises lipid nanoparticles (LNP).
38.根据实施方式28-37中任一项所述的组合物,其中所述递送载体包括阳离子脂质。38. The composition of any one of embodiments 28-37, wherein the delivery vehicle comprises a cationic lipid.
39.根据实施方式38所述的组合物,在所述递送载体中,其中所述阳离子脂质的摩尔比为约45%至约55%。39. The composition of embodiment 38, wherein the molar ratio of the cationic lipid in the delivery vehicle is from about 45% to about 55%.
40.根据实施方式38或39所述的组合物,其中所述阳离子脂质包括SM102和/或Dlin-MC3。40. The composition of embodiment 38 or 39, wherein the cationic lipid comprises SM102 and/or Dlin-MC3.
41.根据实施方式28-40中任一项所述的组合物,其中所述递送载体包括非阳离子脂质。41. The composition of any one of embodiments 28-40, wherein the delivery vehicle comprises a non-cationic lipid.
42.根据实施方式41所述的组合物,其中所述非阳离子脂质包括磷脂和/或脂质缀合物。42. The composition of embodiment 41, wherein the non-cationic lipids comprise phospholipids and/or lipid conjugates.
43.根据实施方式42所述的组合物,其中所述磷脂包括二硬脂酰基磷脂酰胆碱(DSPC)。43. The composition of embodiment 42, wherein the phospholipid comprises distearoylphosphatidylcholine (DSPC).
44.根据实施方式42或43所述的组合物,在所述递送载体中,其中所述磷脂的摩尔比为约35%至约40%。44. The composition of embodiment 42 or 43, in the delivery vehicle, wherein the molar ratio of the phospholipids is from about 35% to about 40%.
45.根据实施方式42-44中任一项所述的组合物,其中所述脂质缀合物包括聚乙二醇修饰的脂分子。45. The composition of any one of embodiments 42-44, wherein the lipid conjugate comprises a polyethylene glycol modified lipid molecule.
46.根据实施方式42-45中任一项所述的组合物,在所述递送载体中,其中所述脂质缀合物的摩尔比为约1%至约2%。46. The composition of any one of embodiments 42-45, in the delivery vehicle, wherein the molar ratio of the lipid conjugate is from about 1% to about 2%.
47.根据实施方式45-46中任一项所述的组合物,其中所述聚乙二醇修饰的脂分子包括DMG-PEG2000。47. The composition of any one of embodiments 45-46, wherein the polyethylene glycol modified lipid molecule comprises DMG-PEG2000.
48.根据实施方式28-47中任一项所述的组合物,其中所述递送载体包括胆固醇。48. The composition of any one of embodiments 28-47, wherein the delivery vehicle includes cholesterol.
49.根据实施方式48所述的组合物,在所述递送载体中,其中所述胆固醇的摩尔比为约8%至约12%。49. The composition of embodiment 48, wherein the molar ratio of cholesterol in the delivery vehicle is from about 8% to about 12%.
50.根据实施方式28-49中任一项所述的组合物,其中所述递送载体包含阳离子脂质、胆固醇、磷脂和脂质缀合物,且所述阳离子脂质、胆固醇、磷脂和脂质缀合物的质量比为50:10:38.5:1.5。50. The composition of any one of embodiments 28-49, wherein the delivery vehicle comprises a cationic lipid, cholesterol, phospholipid, and lipid conjugate, and the cationic lipid, cholesterol, phospholipid, and lipid conjugate The mass ratio of the conjugate is 50:10:38.5:1.5.
51.根据实施方式28-50中任一项所述的组合物,其中所述递送载体包含SM102、胆固醇、DSPC和DMG-PEG2000,且所述SM102、胆固醇、DSPC和DMG-PEG2000的质量比为50:10:38.5:1.5。51. The composition according to any one of embodiments 28-50, wherein the delivery vehicle comprises SM102, cholesterol, DSPC and DMG-PEG2000, and the mass ratio of SM102, cholesterol, DSPC and DMG-PEG2000 is 50:10:38.5:1.5.
52.根据实施方式28-51中任一项所述的组合物,其中所述mRNA包载在所述递送载体中。52. The composition of any one of embodiments 28-51, wherein said mRNA is encapsulated in said delivery vehicle.
53.药物组合物,其包含实施方式1-16中任一项所述的S蛋白变体、实施方式17-24中任一项所述的核酸分子、实施方式25所述的载体、实施方式26所述的细胞和/或实施方式28-52中任一项所述的组合物,以及任选地药学上可接受的载体。53. A pharmaceutical composition comprising the S protein variant according to any one of embodiments 1-16, the nucleic acid molecule according to any one of embodiments 17-24, the vector according to embodiment 25, and the embodiment 26 and/or the composition of any one of embodiments 28-52, and optionally a pharmaceutically acceptable carrier.
54.疫苗,其包含实施方式1-16中任一项所述的S蛋白变体、实施方式17-24中任一项所述的核酸分子、实施方式25所述的载体、实施方式26所述的细胞、实施方式28-52中任一项所述的组合物和/或实施方式53所述的药物组合物,以及药学上可接受的佐剂。54. A vaccine comprising the S protein variant according to any one of embodiments 1-16, the nucleic acid molecule according to any one of embodiments 17-24, the vector according to embodiment 25, and the vector according to embodiment 26. The cells described above, the composition described in any one of embodiments 28-52 and/or the pharmaceutical composition described in embodiment 53, and a pharmaceutically acceptable adjuvant.
55.根据实施方式54所述的疫苗,其为蛋白疫苗。55. The vaccine of embodiment 54, which is a protein vaccine.
56.根据实施方式54所述的疫苗,其为核酸疫苗。56. The vaccine according to embodiment 54, which is a nucleic acid vaccine.
57.根据实施方式56所述的疫苗,其为DNA疫苗。57. The vaccine of embodiment 56, which is a DNA vaccine.
58.根据实施方式56所述的疫苗,其为mRNA疫苗。58. The vaccine of embodiment 56, which is an mRNA vaccine.
59.试剂盒,包含实施方式1-16中任一项所述的S蛋白变体、实施方式17-24中任一项所述的核酸分子、实施方式25所述的载体、实施方式26所述的细胞、实施方式28-52中任一项所述的组合物、实施方式53所述的药物组合物和/或实施方式54-58中任一项所述的疫苗。59. Kit, comprising the S protein variant according to any one of embodiments 1-16, the nucleic acid molecule according to any one of embodiments 17-24, the vector according to embodiment 25, and the vector according to embodiment 26. The cells described above, the composition described in any one of embodiments 28-52, the pharmaceutical composition described in embodiment 53, and/or the vaccine described in any one of embodiments 54-58.
60.实施方式1-16中任一项所述的S蛋白变体、实施方式17-24中任一项所述的核酸分子、实施方式25所述的载体、实施方式26所述的细胞、实施方式28-52中任一项所述的组合物、实施方式53所述的药物组合物和/或实施方式54-58中任一项所述的疫苗在制备药物中的用途,所述药物用于缓解、预防和/或治疗冠状病毒引起的疾病。60. The S protein variant according to any one of embodiments 1-16, the nucleic acid molecule according to any one of embodiments 17-24, the vector according to embodiment 25, the cell according to embodiment 26, The use of the composition described in any one of embodiments 28-52, the pharmaceutical composition described in embodiment 53, and/or the vaccine described in any one of embodiments 54-58 in the preparation of a medicine, the medicine For use in mitigating, preventing, and/or treating illness caused by coronavirus.
61.根据实施方式60所述的用途,其中所述疾病或病症为新型冠状病毒肺炎(COVID-19)和/或重症急性呼吸综合征(SARS)。61. Use according to embodiment 60, wherein the disease or condition is novel coronavirus pneumonia (COVID-19) and/or severe acute respiratory syndrome (SARS).
62.缓解、预防和/或治疗冠状病毒引起的疾病或病症的方法,所述方法包括向有需要的受试者施用实施方式1-16中任一项所述的S蛋白变体、实施方式17-24中任一项所述的核酸分子、实施方式25所述的载体、实施方式26所述的细胞、实施方式28-52中任一项所述的组合物、实施方式53所述的药物组合物和/或实施方式54-58中任一项所述的疫苗。62. A method of alleviating, preventing and/or treating a disease or condition caused by coronavirus, the method comprising administering to a subject in need thereof the S protein variant of any one of embodiments 1-16, embodiment The nucleic acid molecule described in any one of 17-24, the vector described in embodiment 25, the cell described in embodiment 26, the composition described in any one of embodiments 28-52, the vector described in embodiment 53 Pharmaceutical compositions and/or vaccines according to any of embodiments 54-58.
63.根据实施方式62所述的用途,其中所述疾病或病症为新型冠状病毒肺炎(COVID-19)和/或重症急性呼吸综合征(SARS)。63. Use according to embodiment 62, wherein the disease or condition is novel coronavirus pneumonia (COVID-19) and/or severe acute respiratory syndrome (SARS).
64.产生针对冠状病毒抗体的方法,其包括施用实施方式1-16中任一项所述的S蛋白变体、实施方式17-24中任一项所述的核酸分子、实施方式25所述的载体、实施方式26所述的细胞、实施方式28-52中任一项所述的组合物、实施方式53所述的药物组合物和/或实施方式54-58中任一项所述的疫苗。64. A method of producing antibodies against coronavirus, comprising administering the S protein variant described in any one of embodiments 1-16, the nucleic acid molecule described in any one of embodiments 17-24, or the method described in embodiment 25 The vector, the cell described in Embodiment 26, the composition described in any one of Embodiments 28-52, the pharmaceutical composition described in Embodiment 53, and/or the method described in any one of Embodiments 54-58 vaccine.
65.激活免疫的方法,其包括施用实施方式1-16中任一项所述的S蛋白变体、实施方式17-24中任一项所述的核酸分子、实施方式25所述的载体、实施方式26所述的细胞、实施方式28-52中任一项所述的组合物、实施方式53所述的药物组合物和/或实施方式54-58中任一项所述的疫苗。65. A method of activating immunity, comprising administering the S protein variant of any one of embodiments 1-16, the nucleic acid molecule of any one of embodiments 17-24, the vector of embodiment 25, The cell of embodiment 26, the composition of any one of embodiments 28-52, the pharmaceutical composition of embodiment 53, and/or the vaccine of any one of embodiments 54-58.
不欲被任何理论所限,下文中的实施例仅仅是为了阐释本申请发明的各个技术方案,而不用于限制本申请发明的范围。Without intending to be limited by any theory, the following examples are only for illustrating various technical solutions of the invention of the present application, and are not intended to limit the scope of the invention of the present application.
实施例Example
实施例1Example 1
实施例1.1 mRNA制备Example 1.1 Preparation of mRNA
mRNA是以线性化质粒为模板,通过一步法加帽法进行体外转录后得到,转录体系中使用了cap1帽子类似物(m7G(5')ppp(5')(2'OMeA)pG(APExBIO公司产品EZ Cap#B8176,cap1)、ATP、GTP、CTP、Pseudo-UTP(简称pseudoU,ApexBio,#B7972),以产生cap1结构的pseudouridine(Ψ)修饰的mRNA,通过两步层析纯化得到高纯度mRNA。The mRNA was obtained by in vitro transcription using a linearized plasmid as a template through a one-step capping method. The cap1 cap analog (m7G(5')ppp(5')(2'OMeA)pG (APExBIO Company) was used in the transcription system. Product EZ Cap#B8176, cap1), ATP, GTP, CTP, Pseudo-UTP (referred to as pseudoU, ApexBio, #B7972), to produce pseudouridine (Ψ)-modified mRNA of the cap1 structure, which is purified to high purity through two-step chromatography mRNA.
制备得到以下mRNA样品:含Alb信号肽的SARS-Cov-2病毒S蛋白(代号:SDC60 Alb)和SARS病毒的S蛋白(SARS S)。其中,SARS-Cov-2病毒SDC60 Alb蛋白存在以下几种变体:全长蛋白(FL),含K986P和V987P突变的全长蛋白(2P)、全长蛋白C末端分别截短10、18、20、40、60、67个氨基酸的蛋白(DC10,DC18,DC20,DC40,DC60,DC67);SARS病毒的SARS S蛋白变体有:全长蛋白(FL)、全长C末端分别截短10、18、40个氨基酸的蛋白(DC10,DC18,DC40)。The following mRNA samples were prepared: SARS-Cov-2 virus S protein containing Alb signal peptide (code: SDC60 Alb) and SARS virus S protein (SARS S). Among them, the SARS-Cov-2 virus SDC60 Alb protein has the following variants: full-length protein (FL), full-length protein containing K986P and V987P mutations (2P), and the C-terminus of the full-length protein is truncated by 10, 18, respectively. Proteins of 20, 40, 60, and 67 amino acids (DC10, DC18, DC20, DC40, DC60, DC67); SARS S protein variants of SARS virus include: full-length protein (FL) and full-length C-terminus truncated by 10 respectively , 18, 40 amino acid proteins (DC10, DC18, DC40).
实施例1.2脂质纳米颗粒制备Example 1.2 Preparation of lipid nanoparticles
将实施例1.1的mRNA在低pH下可离子化(阳离子),两种辅助脂质(DSPC和胆固醇)和聚乙二醇化脂质(DMG-PEG2000)包被成纳米颗粒。通过将溶解在超纯水中的mRNA,与pH 4.0的100μmM柠檬酸盐缓冲液1:1(v/v)混合,制备了mRNA的水溶液。调节四种脂质组分(阳离子脂质SM102:胆固醇:DSPC:DMG-PEG2000)比例(50:10:38.5:1.5),在乙醇(99.5%)中溶解为脂质溶液。将mRNA和脂质溶液在NanoAssemblr(Precision Nanosystems)微流体混合系统中以Aq:EtOH=3:1的体积混合比和恒定的12mL/min的总流速混合,得到包含mRNA的脂质体纳米颗粒(LNP)。脂纳米颗粒经过透析、浓缩、过滤后保存。The mRNA of Example 1.1 is ionizable (cationic) at low pH, and coated into nanoparticles with two auxiliary lipids (DSPC and cholesterol) and a pegylated lipid (DMG-PEG2000). An aqueous solution of mRNA was prepared by mixing the mRNA dissolved in ultrapure water 1:1 (v/v) with 100 μmM citrate buffer, pH 4.0. The ratio of the four lipid components (cationic lipid SM102: cholesterol: DSPC: DMG-PEG2000) was adjusted (50:10:38.5:1.5) and dissolved in ethanol (99.5%) to form a lipid solution. The mRNA and lipid solutions were mixed in a NanoAssemblr (Precision Nanosystems) microfluidic mixing system with a volume mixing ratio of Aq:EtOH=3:1 and a constant total flow rate of 12mL/min to obtain liposome nanoparticles containing mRNA ( LNP). Lipid nanoparticles are stored after dialysis, concentration, and filtration.
实施例2酶联免疫吸附法测定mRNA转染的细胞中S蛋白的含量Example 2 Determination of S protein content in cells transfected with mRNA using enzyme-linked immunosorbent assay
将实施例1中制备的mRNA分别转染(通过ThermoFisher转染试剂Lipofectamine 2000标准操作流程)到293T细胞中,19hr后收集细胞,用Micro BCA TM蛋白检测试剂盒检测细胞裂解样品的总蛋白量,再用酶联免疫吸附法测定细胞裂解液中S蛋白的含量。 The mRNA prepared in Example 1 was transfected into 293T cells respectively (via the standard operating procedure of ThermoFisher transfection reagent Lipofectamine 2000). The cells were collected after 19 hours, and the total protein amount of the cell lysis sample was detected using the Micro BCA TM protein detection kit. The enzyme-linked immunosorbent assay was then used to determine the S protein content in the cell lysate.
用2μg/mL捕获抗体(抗体原液用1×PBS稀释500倍),包被96孔ELISA板,50μL/孔,每孔共100ng,4度过夜避光存放。对于SARS-Cov-2病毒的S蛋白(SDC60 Alb)和SARS病毒的S蛋白(SARS S),用40150-D006作为捕获抗体,抗体购自Sino Biological。1×PBST(0.05%Tween20)洗板3次,200μL/孔,每次倒扣ELISA板并轻击清洗干净。加100μL/孔2%BSA(溶于1×PBST)封闭,室温孵育1小时。1×PBST(0.05%Tween20)洗板3次,200μL/孔,每次倒扣ELISA板并轻击清洗干净。用SARS-CoV-2和SARS的蛋白分别作为标准品用于定量。对于SDC60 Alb蛋白及其变体,用蛋白40589-V08B1作为标准品,对于SARS S蛋白及其变体,用40150-V08B1作为标准品,蛋白均购自Sino Biological。根据之前BCA定量结果,将待测样品的细胞裂解液分别用1×PBS进行相应浓度的稀释,使样本孔所加入的总蛋白量保持一致。混合均匀后分别移取100μL加到ELISA板中,最终加入ELISA板的每孔总蛋白,即转染SARS-Cov-2病毒的S mRNA的总蛋白量为10μg,转染SARS病毒的S mRNA的总蛋白量为20μg,室温孵育2小时。1×PBST(0.05%Tween20)洗板5次,200μL/孔,每次倒扣ELISA板并轻击清洗干净。用1×PBS将检测抗体稀释至工作浓度,混匀后每孔加入100μL,室温孵育1小时。用于SDC60 Alb蛋白的检测抗体为40591-MM43,工作浓度为0.609μg/mL,用于SARS S蛋白的检测抗体为40150-MM10,工作浓度为1μg/mL,抗体均购自Sino Biological。1×PBST(0.05%Tween20)洗板3次,200μL/孔,每次倒扣ELISA板并轻击清洗干净。用1×PBS将Peroxidase AffiniPure Goat Anti-Mouse IgG(H+L)稀释5000倍,每孔加入100μL,室温孵育1小时。1×PBST(0.05%Tween20)洗3次,200μL/孔,每 次倒扣ELISA板并轻击清洗干净。分别加TMB底物,50μL/孔,室温等待5-15分钟(避光),将呈现蓝色。分别加1M硫酸终止反应,150μL/孔,蓝色将变黄。酶标仪读取OD450。Use 2 μg/mL capture antibody (antibody stock solution is diluted 500 times in 1×PBS), coat a 96-well ELISA plate, 50 μL/well, a total of 100ng per well, and store overnight in the dark for 4 days. For the S protein of SARS-Cov-2 virus (SDC60 Alb) and the S protein of SARS virus (SARS S), 40150-D006 was used as the capture antibody, and the antibody was purchased from Sino Biological. Wash the plate three times with 1×PBST (0.05% Tween20), 200 μL/well, invert the ELISA plate each time and tap to clean. Add 100 μL/well 2% BSA (dissolved in 1×PBST) to block, and incubate at room temperature for 1 hour. Wash the plate three times with 1×PBST (0.05% Tween20), 200 μL/well, invert the ELISA plate each time and tap to clean. SARS-CoV-2 and SARS proteins were used as standards for quantification. For SDC60 Alb protein and its variants, protein 40589-V08B1 was used as the standard. For SARS S protein and its variants, 40150-V08B1 was used as the standard. The proteins were all purchased from Sino Biological. According to the previous BCA quantification results, the cell lysates of the samples to be tested were diluted with 1×PBS at corresponding concentrations to keep the total protein amount added to the sample wells consistent. After mixing evenly, pipet 100 μL and add to the ELISA plate. Finally, add the total protein in each well of the ELISA plate, that is, the total protein amount of S mRNA transfected with SARS-Cov-2 virus is 10 μg, and the total protein amount of S mRNA transfected with SARS virus is 10 μg. The total protein amount was 20 μg and incubated at room temperature for 2 hours. Wash the plate 5 times with 1×PBST (0.05% Tween20), 200 μL/well, invert the ELISA plate each time and tap to clean. Dilute the detection antibody to the working concentration with 1×PBS, mix well, add 100 μL to each well, and incubate at room temperature for 1 hour. The detection antibody used for SDC60 Alb protein is 40591-MM43, with a working concentration of 0.609 μg/mL. The detection antibody used for SARS S protein is 40150-MM10, with a working concentration of 1 μg/mL. The antibodies were purchased from Sino Biological. Wash the plate three times with 1×PBST (0.05% Tween20), 200 μL/well, invert the ELISA plate each time and tap to clean. Dilute Peroxidase AffiniPure Goat Anti-Mouse IgG (H+L) 5000 times with 1×PBS, add 100μL to each well, and incubate at room temperature for 1 hour. Wash 3 times with 1×PBST (0.05% Tween20), 200 μL/well, invert the ELISA plate each time and tap lightly to clean. Add TMB substrate respectively, 50μL/well, wait at room temperature for 5-15 minutes (protect from light), blue will appear. Add 1M sulfuric acid respectively to stop the reaction, 150μL/well, the blue will turn yellow. Read the OD450 with a microplate reader.
如图1A,本申请的SARS-Cov-2的S蛋白变体mRNA转染细胞的体外表达结果显示,对SARS-Cov-2病毒的S蛋白(SDC60 Alb)来说,C末端截短10,18,20,40,60及67个氨基酸之后的蛋白表达量比全长蛋白的表达量高,且全长蛋白的表达量与C末端截短10,18,40个氨基酸之后的蛋白表达量之间有显著性差异。As shown in Figure 1A, the in vitro expression results of cells transfected with the SARS-Cov-2 S protein variant mRNA of the present application show that for the S protein (SDC60 Alb) of the SARS-Cov-2 virus, the C-terminus is truncated by 10, The expression level of the protein after 18, 20, 40, 60 and 67 amino acids is higher than that of the full-length protein, and the expression level of the full-length protein is the same as the expression level of the protein after the C-terminal truncation of 10, 18 and 40 amino acids. There is a significant difference between them.
如图1B,表达SARS病毒的S蛋白(SARS S)的mRNA转染细胞的体外表达结果显示,对SARS S蛋白来说,C末端截短18或40个氨基酸之后的蛋白表达量比全长蛋白的表达量高,且全长蛋白的表达量与C末端截短18或40个氨基酸之后的蛋白表达量之间有显著性差异。(检验方法为Ordinary one-way ANOVA,*P<0.05,**P<0.01,***P<0.001,****P<0.0001,ns:not significant。)As shown in Figure 1B, the in vitro expression results of cells transfected with mRNA expressing the S protein of SARS virus (SARS S) show that for the SARS S protein, the protein expression after the C-terminal truncation of 18 or 40 amino acids is lower than that of the full-length protein. The expression level is high, and there is a significant difference between the expression level of the full-length protein and the protein expression level after C-terminal truncation of 18 or 40 amino acids. (The test method is Ordinary one-way ANOVA, *P<0.05, **P<0.01, ***P<0.001, ****P<0.0001, ns: not significant.)
实施例3脂质纳米颗粒转染细胞Example 3 Transfection of Cells with Lipid Nanoparticles
将实施例2中所得的脂质纳米颗粒分别转染到293A细胞中,24hr后收集细胞用Western Blot检测蛋白表达。所得结果如图1C所示。结果显示,对于野生型S蛋白、SDC60密码子的野生型S蛋白和Alb信号肽的SDC60密码子的野生型S蛋白来说,C末端截短18个氨基酸之后的蛋白表达量均较高。The lipid nanoparticles obtained in Example 2 were transfected into 293A cells respectively. After 24 hours, the cells were collected and Western Blot was used to detect protein expression. The results obtained are shown in Figure 1C. The results showed that for the wild-type S protein, the wild-type S protein with the SDC60 codon, and the wild-type S protein with the SDC60 codon of the Alb signal peptide, the protein expression levels after the C-terminal truncation of 18 amino acids were all higher.
实施例4小鼠免疫实验Example 4 Mouse immunization experiment
将包被好的表达新冠病毒Spike蛋白或者各突变体(SDC60 Alb,SDC60 Alb-2P,SDC60 Alb-DC18)的mRNA的脂质纳米颗粒,进行Balb/c小鼠(肌肉(i.m.)注射,具体信息如下表2所示,小鼠免疫示意图如图2所示。在第1、14、28、42、70天收集血液样品,并且在荧光抗体病毒中和检测中分析血清,具体如以下实施例所述。The coated lipid nanoparticles expressing the SARS-CoV-2 Spike protein or the mRNA of each mutant (SDC60 Alb, SDC60 Alb-2P, SDC60 Alb-DC18) were injected intramuscularly (i.m.) into Balb/c mice, specifically The information is shown in Table 2 below, and the mouse immunization schematic is shown in Figure 2. Blood samples were collected on days 1, 14, 28, 42, and 70, and the sera were analyzed in a fluorescent antibody virus neutralization assay, as detailed in the following examples described.
表1施用信息Table 1 Administration Information
Figure PCTCN2022136551-appb-000003
Figure PCTCN2022136551-appb-000003
Figure PCTCN2022136551-appb-000004
Figure PCTCN2022136551-appb-000004
实施例5酶联免疫吸附法测定血清中抗体效价Example 5 Determination of antibody titer in serum using enzyme-linked immunosorbent assay
分别用2μg/ml抗原蛋白(溶于PBS),100ng,包被96孔ELISA板,50μl/孔,4度过夜避光。其中S蛋白抗原购自Sino Biological,货号40589-V08B1;S蛋白RBD结构域,购自Novoprotein,货号DRA36。PBST(0.05%Tween)洗3次,200μl/孔,每次倒扣ELISA板并轻击清洗干净。加100μl/孔2%BSA(溶于PBST)封闭,室温孵育1hr。PBST(0.05%Tween)洗3次,200μl/孔,每次倒扣ELISA板并轻击清洗干净。加小鼠血清(稀释100倍作为起始浓度,之后5倍梯度稀释,共11个梯度)于PBS中,混合均匀后取100μl分别加到ELISA板中,室温孵育2hr。将实施例4中的小鼠进行眼周采血100μl约40μl血清。洗板后,分别加HRP-anti-mouse IgG(1:5000稀释于PBS),100μl/孔,室温孵育1hr。洗板后,分别加TMB底物(Thermo Fisher,货号34022),50μl/孔,室温等待5-15min(避光),将呈现蓝色。分别加1M硫酸终止反应,150μl/孔,蓝色将变黄。酶标仪读取OD450。Coat 96-well ELISA plate with 2 μg/ml antigen protein (dissolved in PBS), 100 ng, 50 μl/well, and keep overnight for 4 days in the dark. The S protein antigen was purchased from Sino Biological, product number 40589-V08B1; the S protein RBD domain was purchased from Novoprotein, product number DRA36. Wash 3 times with PBST (0.05% Tween), 200 μl/well, invert the ELISA plate each time and tap to clean. Add 100 μl/well 2% BSA (dissolved in PBST) to block, and incubate at room temperature for 1 hr. Wash 3 times with PBST (0.05% Tween), 200 μl/well, invert the ELISA plate each time and tap to clean. Add mouse serum (diluted 100 times as the starting concentration, followed by 5-fold gradient dilution, a total of 11 gradients) in PBS, mix evenly, add 100 μl to the ELISA plate, and incubate at room temperature for 2 hours. From the mice in Example 4, 100 μl of approximately 40 μl of serum was collected around the eyes. After washing the plate, add HRP-anti-mouse IgG (1:5000 diluted in PBS), 100 μl/well, and incubate at room temperature for 1 hr. After washing the plate, add TMB substrate (Thermo Fisher, Cat. No. 34022), 50 μl/well, and wait at room temperature for 5-15 minutes (protect from light), and it will appear blue. Add 1M sulfuric acid respectively to stop the reaction, 150μl/well, the blue will turn yellow. Read the OD450 with a microplate reader.
图3显示,本申请的S蛋白变体mRNA疫苗均可有效激活小鼠免疫系统,血清中产生抗体,且其安全性高、有效性好。在小鼠二免后一周,在同样的免疫剂量(1μg)下,截短18个氨基酸的S蛋白变体的mRNA产生的抗体滴度最高。Figure 3 shows that the S protein variant mRNA vaccines of the present application can effectively activate the mouse immune system and produce antibodies in the serum, and are highly safe and effective. One week after the second immunization of mice, at the same immunization dose (1 μg), the mRNA of the S protein variant truncated to 18 amino acids produced the highest antibody titer.
前述详细说明是以解释和举例的方式提供的,并非要限制所附权利要求的范围。目前本申请所列举的实施方式的多种变化对本领域普通技术人员来说是显而易见的,且保留在所附的权利要求和其等同方式的范围内。The foregoing detailed description is provided by way of explanation and example, and is not intended to limit the scope of the appended claims. Various modifications to the embodiments described herein will be apparent to those of ordinary skill in the art and remain within the scope of the appended claims and their equivalents.

Claims (65)

  1. S蛋白变体,与野生型冠状病毒的S蛋白相比,其不包含完整的细胞质尾巴结构域。S protein variant, which does not contain a complete cytoplasmic tail domain compared to the S protein of wild-type coronavirus.
  2. 根据权利要求1所述的S蛋白变体,与野生型冠状病毒的S蛋白相比,其包含截短的细胞质尾巴结构域。The S protein variant according to claim 1, compared with the S protein of wild-type coronavirus, it contains a truncated cytoplasmic tail domain.
  3. 根据权利要求1-2中任一项所述的S蛋白变体,与野生型冠状病毒的S蛋白相比,其在C末端截短了18-20个氨基酸。According to the S protein variant according to any one of claims 1-2, compared with the S protein of wild-type coronavirus, 18-20 amino acids are truncated at the C terminus.
  4. 根据权利要求3所述的S蛋白变体,与野生型冠状病毒的S蛋白相比,其在C末端截短了18个氨基酸。According to the S protein variant of claim 3, compared with the S protein of wild-type coronavirus, 18 amino acids are truncated at the C terminus.
  5. 根据权利要求1所述的S蛋白变体,与野生型冠状病毒的S蛋白相比,其不包含细胞质尾巴结构域。The S protein variant according to claim 1, compared with the S protein of wild-type coronavirus, it does not contain a cytoplasmic tail domain.
  6. 根据权利要求5所述的S蛋白变体,与野生型冠状病毒的S蛋白相比,其不包含跨膜域。The S protein variant according to claim 5, compared with the S protein of wild-type coronavirus, it does not contain a transmembrane domain.
  7. 根据权利要求5-6中任一项所述的S蛋白变体,与野生型冠状病毒的S蛋白相比,其在C末端截短了22-64个氨基酸。According to the S protein variant according to any one of claims 5-6, compared with the S protein of wild-type coronavirus, 22-64 amino acids are truncated at the C terminus.
  8. 根据权利要求1-7中任一项所述的S蛋白变体,其中所述冠状病毒为MERS冠状病毒和/或SARS-CoV类病毒。The S protein variant according to any one of claims 1-7, wherein the coronavirus is a MERS coronavirus and/or a SARS-CoV-like virus.
  9. 根据权利要求1-8中任一项所述的S蛋白变体,其中所述冠状病毒为SARS-CoV-2病毒。The S protein variant according to any one of claims 1-8, wherein the coronavirus is a SARS-CoV-2 virus.
  10. 根据权利要求1-9中任一项所述的S蛋白变体,其中所述野生型冠状病毒的S蛋白的细胞质尾巴结构域包含SEQ ID NO:48、49、86和87中任一项所示的氨基酸序列。The S protein variant according to any one of claims 1-9, wherein the cytoplasmic tail domain of the S protein of the wild-type coronavirus comprises any one of SEQ ID NOs: 48, 49, 86 and 87. The amino acid sequence shown.
  11. 根据权利要求6-10中任一项所述的S蛋白变体,其中所述野生型冠状病毒的S蛋白的跨膜域包含SEQ ID NO:50、51、88和89中任一项所示的氨基酸序列。The S protein variant according to any one of claims 6-10, wherein the transmembrane domain of the S protein of the wild-type coronavirus includes any one of SEQ ID NO: 50, 51, 88 and 89 amino acid sequence.
  12. 根据权利要求1-11中任一项所述的S蛋白变体,其中所述野生型冠状病毒的S蛋白包含SEQ ID NO:5、34和44中任一项所示的氨基酸序列。The S protein variant according to any one of claims 1-11, wherein the S protein of the wild-type coronavirus comprises the amino acid sequence shown in any one of SEQ ID NO: 5, 34 and 44.
  13. 根据权利要求1-12中任一项所述的S蛋白变体,其包含SEQ ID NO:8、21、24、27、30、33、35、38、41、45、59、61和94中任一项所示的氨基酸序列。The S protein variant according to any one of claims 1-12, which includes SEQ ID NO: 8, 21, 24, 27, 30, 33, 35, 38, 41, 45, 59, 61 and 94 The amino acid sequence shown in any one.
  14. 根据权利要求1-13中任一项所述的S蛋白变体,其包含SEQ ID NO:8所示的氨基酸序列。The S protein variant according to any one of claims 1-13, which comprises the amino acid sequence shown in SEQ ID NO:8.
  15. 根据权利要求1-14中任一项所述的S蛋白变体,其还包括信号肽,且所述信号肽位于所述S蛋白变体的N末端。The S protein variant according to any one of claims 1 to 14, further comprising a signal peptide, and the signal peptide is located at the N-terminus of the S protein variant.
  16. 根据权利要求15所述的S蛋白变体,其中所述信号肽包含SEQ ID NO:1、2和68中任一项所示的氨基酸序列。The S protein variant according to claim 15, wherein the signal peptide comprises the amino acid sequence shown in any one of SEQ ID NO: 1, 2 and 68.
  17. 分离的核酸分子,其包含编码权利要求1-16中任一项所述的S蛋白变体的多核苷酸。An isolated nucleic acid molecule comprising a polynucleotide encoding the S protein variant of any one of claims 1-16.
  18. 根据权利要求17所述的核酸分子,其为DNA。The nucleic acid molecule of claim 17, which is DNA.
  19. 根据权利要求17-18中任一项所述的核酸分子,其包含SEQ ID NO:6、9-19、22、25、28、31、36、39、42、46、60、62、63、71、72、74、76、78、80、82、84、95、96和97中任一项所述的核苷酸序列。The nucleic acid molecule according to any one of claims 17-18, comprising SEQ ID NO: 6, 9-19, 22, 25, 28, 31, 36, 39, 42, 46, 60, 62, 63, The nucleotide sequence of any one of 71, 72, 74, 76, 78, 80, 82, 84, 95, 96 and 97.
  20. 根据权利要求17所述的核酸分子,其为mRNA。The nucleic acid molecule of claim 17, which is mRNA.
  21. 根据权利要求20所述的核酸分子,其在选自下组的一个或多个位置处包含修饰:5’帽、5’非翻译区、开放阅读框、3’非翻译区和3’聚腺苷酸。The nucleic acid molecule of claim 20, comprising modifications at one or more positions selected from the group consisting of: 5' cap, 5' untranslated region, open reading frame, 3' untranslated region and 3' polygland glycosides.
  22. 根据权利要求20-21中任一项所述的核酸分子,其包含至少一种经修饰的核苷酸。The nucleic acid molecule of any one of claims 20-21, comprising at least one modified nucleotide.
  23. 根据权利要求20-22中任一项所述的核酸分子,其为密码子优化的。The nucleic acid molecule according to any one of claims 20-22, which is codon optimized.
  24. 根据权利要求20-23中任一项所述的核酸分子,其包含SEQ ID NO:7、20、23、26、29、32、37、40、43、47、73、75、77、79、81、83和85中任一项所示的核苷酸序列。The nucleic acid molecule according to any one of claims 20-23, comprising SEQ ID NO: 7, 20, 23, 26, 29, 32, 37, 40, 43, 47, 73, 75, 77, 79, The nucleotide sequence shown in any one of 81, 83 and 85.
  25. 载体,其包含权利要求17-24中任一项所述的核酸分子。A vector comprising the nucleic acid molecule of any one of claims 17-24.
  26. 细胞,其包含权利要求17-24中任一项所述的核酸分子,和/或权利要求25所述的载体。Cells comprising the nucleic acid molecule of any one of claims 17-24, and/or the vector of claim 25.
  27. 制备权利要求1-16中任一项所述的S蛋白变体的方法,所述方法包括在使得权利要求1-16中任一项所述的S蛋白变体表达的条件下,培养根据权利要求26所述的细胞。A method for preparing the S protein variant according to any one of claims 1 to 16, the method comprising culturing the S protein variant according to any one of claims 1 to 16 under conditions allowing expression of the S protein variant according to any one of claims 1 to 16. The cell of claim 26.
  28. 组合物,其包含(1)编码权利要求1-16中任一项所述的S蛋白变体的mRNA,和(2)递送载体。A composition comprising (1) an mRNA encoding the S protein variant of any one of claims 1-16, and (2) a delivery vector.
  29. 根据权利要求28所述的组合物,其中所述mRNA在选自下组的一个或多个位置处包含修饰:5’帽、5’非翻译区、开放阅读框、3’非翻译区和poly A尾。The composition of claim 28, wherein the mRNA comprises modifications at one or more positions selected from the group consisting of: 5' cap, 5' untranslated region, open reading frame, 3' untranslated region and poly A tail.
  30. 根据权利要求28-29中任一项所述的组合物,其中所述mRNA包含至少一种经修饰的核苷酸。The composition of any one of claims 28-29, wherein said mRNA comprises at least one modified nucleotide.
  31. 根据权利要求28-30中任一项所述的组合物,其中所述mRNA包含的经修饰的核苷酸为假尿苷(Ψ)。The composition of any one of claims 28-30, wherein the modified nucleotide comprised by the mRNA is pseudouridine (Ψ).
  32. 根据权利要求28-31中任一项所述的组合物,其中所述mRNA是密码子优化的。The composition of any one of claims 28-31, wherein said mRNA is codon optimized.
  33. 根据权利要求28-32中任一项所述的组合物,其中所述mRNA包含如SEQ ID NO:7、20、23、26、29、32、37、40、43、47、73、75、77、79、81、83和85中任一项所示的核苷酸序列。The composition according to any one of claims 28-32, wherein the mRNA comprises SEQ ID NO: 7, 20, 23, 26, 29, 32, 37, 40, 43, 47, 73, 75, The nucleotide sequence shown in any one of 77, 79, 81, 83 and 85.
  34. 根据权利要求28-32中任一项所述的组合物,其中所述S蛋白变体源自SARS CoV-2病毒。The composition of any one of claims 28-32, wherein the S protein variant is derived from SARS CoV-2 virus.
  35. 根据权利要求28-32中任一项所述的组合物,其中所述mRNA包含如SEQ ID NO:7或67 所示的核苷酸序列。The composition of any one of claims 28-32, wherein the mRNA comprises a nucleotide sequence as shown in SEQ ID NO: 7 or 67.
  36. 根据权利要求28-35中任一项所述的组合物,其中所述递送载体包括脂质体。The composition of any one of claims 28-35, wherein the delivery vehicle comprises liposomes.
  37. 根据权利要求28-36中任一项所述的组合物,其中所述递送载体包括脂质纳米颗粒(LNP)。The composition of any one of claims 28-36, wherein the delivery vehicle comprises lipid nanoparticles (LNP).
  38. 根据权利要求28-37中任一项所述的组合物,其中所述递送载体包括阳离子脂质。The composition of any one of claims 28-37, wherein the delivery vehicle comprises a cationic lipid.
  39. 根据权利要求38所述的组合物,在所述递送载体中,其中所述阳离子脂质的摩尔比为约45%至约55%。The composition of claim 38, wherein the molar ratio of the cationic lipid in the delivery vehicle is from about 45% to about 55%.
  40. 根据权利要求38或39所述的组合物,其中所述阳离子脂质包括SM102和/或Dlin-MC3。The composition of claim 38 or 39, wherein the cationic lipid comprises SM102 and/or Dlin-MC3.
  41. 根据权利要求28-40中任一项所述的组合物,其中所述递送载体包括非阳离子脂质。The composition of any one of claims 28-40, wherein the delivery vehicle comprises a non-cationic lipid.
  42. 根据权利要求41所述的组合物,其中所述非阳离子脂质包括磷脂和/或脂质缀合物。The composition of claim 41, wherein the non-cationic lipids comprise phospholipids and/or lipid conjugates.
  43. 根据权利要求42所述的组合物,其中所述磷脂包括二硬脂酰基磷脂酰胆碱(DSPC)。The composition of claim 42, wherein the phospholipid includes distearoylphosphatidylcholine (DSPC).
  44. 根据权利要求42或43所述的组合物,在所述递送载体中,其中所述磷脂的摩尔比为约35%至约40%。The composition of claim 42 or 43, in the delivery vehicle, wherein the molar ratio of the phospholipids is from about 35% to about 40%.
  45. 根据权利要求42-44中任一项所述的组合物,其中所述脂质缀合物包括聚乙二醇修饰的脂分子。The composition of any one of claims 42-44, wherein the lipid conjugate comprises a polyethylene glycol modified lipid molecule.
  46. 根据权利要求42-45中任一项所述的组合物,在所述递送载体中,其中所述脂质缀合物的摩尔比为约1%至约2%。The composition of any one of claims 42-45, wherein the molar ratio of the lipid conjugate in the delivery vehicle is from about 1% to about 2%.
  47. 根据权利要求45-46中任一项所述的组合物,其中所述聚乙二醇修饰的脂分子包括DMG-PEG2000。The composition of any one of claims 45-46, wherein the polyethylene glycol modified lipid molecule comprises DMG-PEG2000.
  48. 根据权利要求28-47中任一项所述的组合物,其中所述递送载体包括胆固醇。The composition of any one of claims 28-47, wherein the delivery vehicle includes cholesterol.
  49. 根据权利要求48所述的组合物,在所述递送载体中,其中所述胆固醇的摩尔比为约8%至约12%。The composition of claim 48, wherein the molar ratio of cholesterol in the delivery vehicle is from about 8% to about 12%.
  50. 根据权利要求28-49中任一项所述的组合物,其中所述递送载体包含阳离子脂质、胆固醇、磷脂和脂质缀合物,且所述阳离子脂质、胆固醇、磷脂和脂质缀合物的质量比为50:10:38.5:1.5。The composition of any one of claims 28-49, wherein the delivery vehicle comprises cationic lipids, cholesterol, phospholipids and lipid conjugates, and the cationic lipids, cholesterol, phospholipids and lipid conjugates The mass ratio of the compound is 50:10:38.5:1.5.
  51. 根据权利要求28-50中任一项所述的组合物,其中所述递送载体包含SM102、胆固醇、DSPC和DMG-PEG2000,且所述SM102、胆固醇、DSPC和DMG-PEG2000的质量比为50:10:38.5:1.5。The composition according to any one of claims 28-50, wherein the delivery carrier comprises SM102, cholesterol, DSPC and DMG-PEG2000, and the mass ratio of SM102, cholesterol, DSPC and DMG-PEG2000 is 50: 10:38.5:1.5.
  52. 根据权利要求28-51中任一项所述的组合物,其中所述mRNA包载在所述递送载体中。The composition of any one of claims 28-51, wherein said mRNA is entrapped in said delivery vehicle.
  53. 药物组合物,其包含权利要求1-16中任一项所述的S蛋白变体、权利要求17-24中任一项所述的核酸分子、权利要求25所述的载体、权利要求26所述的细胞和/或权利要求28-52 中任一项所述的组合物,以及任选地药学上可接受的载体。A pharmaceutical composition comprising the S protein variant of any one of claims 1-16, the nucleic acid molecule of any one of claims 17-24, the vector of claim 25, the vector of claim 26 The cells and/or the composition of any one of claims 28-52, and optionally a pharmaceutically acceptable carrier.
  54. 疫苗,其包含权利要求1-16中任一项所述的S蛋白变体、权利要求17-24中任一项所述的核酸分子、权利要求25所述的载体、权利要求26所述的细胞、权利要求28-52中任一项所述的组合物和/或权利要求53所述的药物组合物,以及药学上可接受的佐剂。A vaccine comprising the S protein variant according to any one of claims 1 to 16, the nucleic acid molecule according to any one of claims 17 to 24, the vector according to claim 25, or the vector according to claim 26. Cells, the composition of any one of claims 28-52 and/or the pharmaceutical composition of claim 53, and a pharmaceutically acceptable adjuvant.
  55. 根据权利要求54所述的疫苗,其为蛋白疫苗。The vaccine according to claim 54, which is a protein vaccine.
  56. 根据权利要求54所述的疫苗,其为核酸疫苗。The vaccine according to claim 54, which is a nucleic acid vaccine.
  57. 根据权利要求56所述的疫苗,其为DNA疫苗。The vaccine according to claim 56, which is a DNA vaccine.
  58. 根据权利要求56所述的疫苗,其为mRNA疫苗。The vaccine according to claim 56, which is an mRNA vaccine.
  59. 试剂盒,包含权利要求1-16中任一项所述的S蛋白变体、权利要求17-24中任一项所述的核酸分子、权利要求25所述的载体、权利要求26所述的细胞、权利要求28-52中任一项所述的组合物、权利要求53所述的药物组合物和/或权利要求54-58中任一项所述的疫苗。A kit comprising the S protein variant according to any one of claims 1 to 16, the nucleic acid molecule according to any one of claims 17 to 24, the vector according to claim 25, and the nucleic acid molecule according to any one of claims 17 to 24. Cells, the composition of any one of claims 28-52, the pharmaceutical composition of claim 53, and/or the vaccine of any one of claims 54-58.
  60. 权利要求1-16中任一项所述的S蛋白变体、权利要求17-24中任一项所述的核酸分子、权利要求25所述的载体、权利要求26所述的细胞、权利要求28-52中任一项所述的组合物、权利要求53所述的药物组合物和/或权利要求54-58中任一项所述的疫苗在制备药物中的用途,所述药物用于缓解、预防和/或治疗冠状病毒引起的疾病。The S protein variant of any one of claims 1-16, the nucleic acid molecule of any one of claims 17-24, the vector of claim 25, the cell of claim 26, the The use of the composition according to any one of 28-52, the pharmaceutical composition according to claim 53 and/or the vaccine according to any one of claims 54-58 in the preparation of a medicine, the medicine is used for Mitigation, prevention and/or treatment of illness caused by coronavirus.
  61. 根据权利要求60所述的用途,其中所述疾病或病症为新型冠状病毒肺炎(COVID-19)和/或重症急性呼吸综合征(SARS)。The use according to claim 60, wherein the disease or condition is novel coronavirus pneumonia (COVID-19) and/or severe acute respiratory syndrome (SARS).
  62. 缓解、预防和/或治疗冠状病毒引起的疾病或病症的方法,所述方法包括向有需要的受试者施用权利要求1-16中任一项所述的S蛋白变体、权利要求17-24中任一项所述的核酸分子、权利要求25所述的载体、权利要求26所述的细胞、权利要求28-52中任一项所述的组合物、权利要求53所述的药物组合物和/或权利要求54-58中任一项所述的疫苗。A method of alleviating, preventing and/or treating diseases or conditions caused by coronavirus, the method comprising administering to a subject in need the S protein variant of any one of claims 1-16, claim 17- The nucleic acid molecule according to any one of 24, the vector according to claim 25, the cell according to claim 26, the composition according to any one of claims 28-52, and the pharmaceutical combination according to claim 53 and/or the vaccine according to any one of claims 54-58.
  63. 根据权利要求62所述的用途,其中所述疾病或病症为新型冠状病毒肺炎(COVID-19)和/或重症急性呼吸综合征(SARS)。The use according to claim 62, wherein the disease or condition is novel coronavirus pneumonia (COVID-19) and/or severe acute respiratory syndrome (SARS).
  64. 产生针对冠状病毒抗体的方法,其包括施用权利要求1-16中任一项所述的S蛋白变体、权利要求17-24中任一项所述的核酸分子、权利要求25所述的载体、权利要求26所述的细胞、权利要求28-52中任一项所述的组合物、权利要求53所述的药物组合物和/或权利要求54-58中任一项所述的疫苗。A method of producing antibodies against coronavirus, comprising administering the S protein variant of any one of claims 1-16, the nucleic acid molecule of any one of claims 17-24, and the vector of claim 25 , the cell of claim 26, the composition of any one of claims 28-52, the pharmaceutical composition of claim 53, and/or the vaccine of any one of claims 54-58.
  65. 激活免疫的方法,其包括施用权利要求1-16中任一项所述的S蛋白变体、权利要求17-24中任一项所述的核酸分子、权利要求25所述的载体、权利要求26所述的细胞、权利要求28-52中任一项所述的组合物、权利要求53所述的药物组合物和/或权利要求54-58中任一项 所述的疫苗。A method of activating immunity, comprising administering the S protein variant of any one of claims 1-16, the nucleic acid molecule of any one of claims 17-24, the vector of claim 25, 26, the composition of any one of claims 28-52, the pharmaceutical composition of claim 53, and/or the vaccine of any one of claims 54-58.
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Publication number Priority date Publication date Assignee Title
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Citations (10)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN111603557A (en) * 2020-06-15 2020-09-01 苏州奥特铭医药科技有限公司 Envelope-substituted virus vector vaccine and construction method thereof
CN112724209A (en) * 2021-01-18 2021-04-30 广东华南疫苗股份有限公司 Coronavirus recombinant protein capable of forming nano-particles and carrier and application thereof
CN112760297A (en) * 2020-06-16 2021-05-07 睿丰康生物医药科技(浙江)有限公司 Coronavirus pseudovirus packaging system and packaging method thereof, and application of coronavirus pseudovirus in evaluating killing efficacy
WO2021154763A1 (en) * 2020-01-28 2021-08-05 Modernatx, Inc. Coronavirus rna vaccines
WO2021207597A1 (en) * 2020-04-10 2021-10-14 Adagio Therapeutics, Inc. Compounds specific to coronavirus s protein and uses thereof
WO2021211688A1 (en) * 2020-04-14 2021-10-21 Duke University Sars-2 spike protein designs, compositions and methods for their use
WO2022051859A1 (en) * 2020-09-11 2022-03-17 Manuel Caruso Pseudotyped retroviral particles for inducing immunity against coronavirus infections
WO2022071513A1 (en) * 2020-10-02 2022-04-07 国立大学法人大阪大学 IMPROVED DNA VACCINE FOR SARS-CoV-2
CN114560915A (en) * 2021-12-27 2022-05-31 中国食品药品检定研究院 Modified high-titer SARS-CoV-2 pseudovirus
WO2023280220A1 (en) * 2021-07-09 2023-01-12 复旦大学 S protein variant of coronavirus and use thereof

Family Cites Families (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN111705006B (en) * 2020-06-11 2022-10-04 天津大学 Oral recombinant yeast for expressing novel coronavirus S protein and preparation and application thereof
CN112618707B (en) * 2020-10-15 2023-07-04 广州达博生物制品有限公司 SARS-CoV-2 coronavirus vaccine and its preparation method
CN113041357B (en) * 2021-02-18 2022-11-01 厦门大学 Aptamer nanoparticle for novel coronavirus and preparation method and application thereof

Patent Citations (10)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2021154763A1 (en) * 2020-01-28 2021-08-05 Modernatx, Inc. Coronavirus rna vaccines
WO2021207597A1 (en) * 2020-04-10 2021-10-14 Adagio Therapeutics, Inc. Compounds specific to coronavirus s protein and uses thereof
WO2021211688A1 (en) * 2020-04-14 2021-10-21 Duke University Sars-2 spike protein designs, compositions and methods for their use
CN111603557A (en) * 2020-06-15 2020-09-01 苏州奥特铭医药科技有限公司 Envelope-substituted virus vector vaccine and construction method thereof
CN112760297A (en) * 2020-06-16 2021-05-07 睿丰康生物医药科技(浙江)有限公司 Coronavirus pseudovirus packaging system and packaging method thereof, and application of coronavirus pseudovirus in evaluating killing efficacy
WO2022051859A1 (en) * 2020-09-11 2022-03-17 Manuel Caruso Pseudotyped retroviral particles for inducing immunity against coronavirus infections
WO2022071513A1 (en) * 2020-10-02 2022-04-07 国立大学法人大阪大学 IMPROVED DNA VACCINE FOR SARS-CoV-2
CN112724209A (en) * 2021-01-18 2021-04-30 广东华南疫苗股份有限公司 Coronavirus recombinant protein capable of forming nano-particles and carrier and application thereof
WO2023280220A1 (en) * 2021-07-09 2023-01-12 复旦大学 S protein variant of coronavirus and use thereof
CN114560915A (en) * 2021-12-27 2022-05-31 中国食品药品检定研究院 Modified high-titer SARS-CoV-2 pseudovirus

Non-Patent Citations (2)

* Cited by examiner, † Cited by third party
Title
DATABASE UniProtKB 22 April 2020 (2020-04-22), ANONYMOUS : "RecName: Full=Spike glycoprotein {ECO:0000255|HAMAP-Rule:MF_04099}", XP093114033, Database accession no. P0DTC2 *
TOMBERG KÄRT, ANTUNES LILIANA, PAN YANGYANG, HEPKEMA JACOB, GARYFALLOS DIMITRIOS A., MAHFOUZ AHMED, BRADLEY ALLAN: "Intronization enhances expression of S-protein and other transgenes challenged by cryptic splicing", BIORXIV, 15 September 2021 (2021-09-15), XP093114025, DOI: 10.1101/2021.09.15.460454 *

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