WO2023208023A1 - Deuterated chemical modification and oligonucleotide including same - Google Patents

Deuterated chemical modification and oligonucleotide including same Download PDF

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WO2023208023A1
WO2023208023A1 PCT/CN2023/090779 CN2023090779W WO2023208023A1 WO 2023208023 A1 WO2023208023 A1 WO 2023208023A1 CN 2023090779 W CN2023090779 W CN 2023090779W WO 2023208023 A1 WO2023208023 A1 WO 2023208023A1
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oligonucleotide
deuterium
group
formula
ribonucleoside
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Chinese (zh)
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王艳辉
李云飞
林晓燕
张瑱
董玉琼
刘敏
张建羽
茅松
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上海拓界生物医药科技有限公司
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    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00Medicinal preparations containing organic active ingredients
    • A61K31/70Carbohydrates; Sugars; Derivatives thereof
    • A61K31/7088Compounds having three or more nucleosides or nucleotides
    • A61K31/713Double-stranded nucleic acids or oligonucleotides
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K48/00Medicinal preparations containing genetic material which is inserted into cells of the living body to treat genetic diseases; Gene therapy
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07BGENERAL METHODS OF ORGANIC CHEMISTRY; APPARATUS THEREFOR
    • C07B59/00Introduction of isotopes of elements into organic compounds ; Labelled organic compounds per se
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    • C07ORGANIC CHEMISTRY
    • C07HSUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H21/00Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids
    • C07H21/02Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids with ribosyl as saccharide radical
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07HSUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H21/00Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids
    • C07H21/04Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids with deoxyribosyl as saccharide radical
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/11DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
    • C12N15/113Non-coding nucleic acids modulating the expression of genes, e.g. antisense oligonucleotides; Antisense DNA or RNA; Triplex- forming oligonucleotides; Catalytic nucleic acids, e.g. ribozymes; Nucleic acids used in co-suppression or gene silencing

Abstract

The present disclosure relates to a deuterated chemical modification and an oligonucleotide including same. Specifically, the present disclosure relates to an oligonucleotide including a chemical modification represented by formula (I) or a tautomer modification thereof, wherein the functional groups are as defined in the present disclosure.

Description

氘代化学修饰和包含其的寡核苷酸Deuterated chemical modifications and oligonucleotides containing the same
本公开要求申请日为2022年04月26日的中国专利申请202210448666.8的优先权,本公开引用上述中国专利申请的全文。This disclosure claims priority from Chinese patent application 202210448666.8 with a filing date of April 26, 2022. This disclosure cites the full text of the above-mentioned Chinese patent application.
技术领域Technical field
本公开涉及氘代化学修饰的寡核苷酸,其稳定性提高,可以被靶向递送到细胞内,发挥RNA干扰的作用。本公开还涉及寡核苷酸的制备方法及应用。The present disclosure relates to deuterated chemically modified oligonucleotides, which have improved stability and can be targeted and delivered into cells to exert RNA interference effects. The present disclosure also relates to preparation methods and applications of oligonucleotides.
背景技术Background technique
RNA干扰(RNAi)是一种有效的沉默基因表达的方式。据统计,在人体内的疾病相关蛋白中,大约超过80%的蛋白质不能被目前常规的小分子药物以及生物大分子制剂所靶向,属于不可成药蛋白。利用RNA干扰技术,可以根据编码这些蛋白的mRNA,设计合适的siRNA,特异性靶向目标mRNA并降解目标mRNA,从而达到抑制相关的蛋白生成的目的。因此siRNA具有非常重要的药物开发前景。RNA interference (RNAi) is an effective way to silence gene expression. According to statistics, among the disease-related proteins in the human body, more than 80% of them cannot be targeted by current conventional small molecule drugs and biological macromolecule preparations, and are undruggable proteins. Using RNA interference technology, appropriate siRNA can be designed based on the mRNA encoding these proteins, specifically targeting the target mRNA and degrading the target mRNA, thereby achieving the purpose of inhibiting the production of related proteins. Therefore, siRNA has very important drug development prospects.
然而未修饰的小核酸在体内(血浆、溶酶体等)不稳定,易被(内、外切酶等)降解。同时药代动力学也差,易被肾小球过滤,给药后迅速被尿液排出。因此,siRNA需要特定的化学修饰提升其核酸酶抗性,提升其体内稳定性,改善组织分布,并提升其药代动力学性质,从而对相对应疾病实现药物治疗的效果。However, unmodified small nucleic acids are unstable in the body (plasma, lysosomes, etc.) and are easily degraded (endo- and exonucleases, etc.). At the same time, the pharmacokinetics are poor, and it is easily filtered by the glomerulus and is quickly excreted in the urine after administration. Therefore, siRNA requires specific chemical modifications to improve its nuclease resistance, improve its in vivo stability, improve tissue distribution, and improve its pharmacokinetic properties to achieve drug treatment effects on the corresponding diseases.
CN110072530A公开了一类4′-磷酸酯类似物,用于调节细胞中靶基因的性质。但是核酸酶以及其他可能对核酸作用的物质会降低4′-磷酸酯类似物修饰的siRNA在生物体内的作用,因此需要化学修饰进一步的来提升其体内稳定性,增加细胞对是RNA的摄取能力,增强反义链对靶标的活性,从而达到长时间的对靶mRNA的抑制效果等。本公开通过氘代siRNA的反义链5’-末端核苷酸,可进一步增强了反义链对靶标的活性,提高了siRNA对核酸酶等代谢酶类的稳定性,进一步提升其体内稳定性,从而达到对靶mRNA及其相应蛋白更高效、更长效的抑制效果;这也进一步降低了siRNA靶向mRNA可能带来的毒性,减少了患者给药频率,进一步提高了siRNA的成药性质。CN110072530A discloses a class of 4'-phosphate analogues for regulating the properties of target genes in cells. However, nucleases and other substances that may act on nucleic acids will reduce the effect of siRNA modified with 4'-phosphate analogues in vivo. Therefore, further chemical modification is needed to improve its stability in vivo and increase the ability of cells to uptake RNA. , enhance the activity of the antisense strand on the target, thereby achieving a long-term inhibitory effect on the target mRNA. By deuterating the 5'-terminal nucleotide of the antisense chain of siRNA, the present disclosure can further enhance the activity of the antisense chain against the target, improve the stability of siRNA against metabolic enzymes such as nucleases, and further improve its in vivo stability. , thereby achieving a more efficient and longer-lasting inhibitory effect on the target mRNA and its corresponding protein; this also further reduces the possible toxicity caused by siRNA targeting mRNA, reduces the frequency of patient administration, and further improves the drug properties of siRNA.
1963年挪威遗传学家Berg首先发现的脂蛋白(a)(Lp(a))被鉴定为独特的脂蛋白(Berg K.A new serum type system in man-the Lp system.Acta Pathol Microbiol Scand 1963;59:369–82.)。Lp(a)由脂质和蛋白质两部分组成:脂质部分主要是位于核心部位的LDL样微粒;蛋白质部分位于外周,由载脂蛋白(a)(apo(a))和apoB100通过二硫键连接而成。Lipoprotein (a) (Lp(a)), first discovered by Norwegian geneticist Berg in 1963, was identified as a unique lipoprotein (Berg K.A new serum type system in man-the Lp system. Acta Pathol Microbiol Scand 1963; 59: 369–82.). Lp(a) consists of two parts: lipid and protein: the lipid part is mainly LDL-like particles located in the core; the protein part is located in the periphery and consists of apolipoprotein(a)(apo(a)) and apoB100 through disulfide bonds connected.
Lp(a)升高的患者其心血管事件的风险是正常人群的2-3倍,引起包括动脉粥样硬化心血管疾病、下肢动脉病变、主动脉瓣膜狭窄等(EnAs EA,Varkey B,Dharmarajan T S,et al.Lipoprotein(a):An independent,genetic,and causal factor for  cardiovascular disease and acute myocardial infarction[J].Indian Heart Journal,2019,71(2).)。Lp(a)可能通过以下两种机制导致不良的动脉粥样硬化性心血管疾病(ASCVD):一方面由于apo(a)在体外被证实可抑制纤溶,因此可能促进斑块破裂处的血栓形成或血管狭窄处的湍流,从而导致血管阻塞或促进血栓形成;另一方面LDL样颗粒可促进内膜胆固醇沉积、炎症或氧化磷脂,从而导致动脉粥样性狭窄或主动脉瓣狭窄(Albert Youngwoo Jang,Seung Hwan Han,Il Suk Sohn,et al.Lipoprotein(a)and Cardiovascular Diseases[J].Circulation Journal,2020,84:867–874)。但即使非常高水平的Lp(a),其胆固醇含量也低于传统LDL临界值,因而,LDL样颗粒这部分的致病性可能比较少。The risk of cardiovascular events in patients with elevated Lp(a) is 2-3 times that of the normal population, including atherosclerotic cardiovascular disease, lower extremity arterial disease, aortic stenosis, etc. (EnAs EA, Varkey B, Dharmarajan T S,et al.Lipoprotein(a):An independent,genetic,and causal factor for cardiovascular disease and acute myocardial infarction[J].Indian Heart Journal,2019,71(2).). Lp(a) may cause adverse atherosclerotic cardiovascular disease (ASCVD) through the following two mechanisms: on the one hand, because apo(a) has been shown to inhibit fibrinolysis in vitro, it may promote thrombus at the site of plaque rupture. Formation or turbulence in blood vessel stenosis, leading to vessel obstruction or promoting thrombosis; on the other hand, LDL-like particles can promote intimal cholesterol deposition, inflammation or oxidized phospholipids, leading to atherosclerosis or aortic valve stenosis (Albert Youngwoo Jang, Seung Hwan Han, Il Suk Sohn, et al. Lipoprotein(a)and Cardiovascular Diseases[J]. Circulation Journal, 2020, 84:867–874). But even at very high levels of Lp(a), the cholesterol content is below the traditional LDL cutoff, so this part of the LDL-like particles may be less pathogenic.
2016年中国成人血脂异常防治指南将>30mg/dl定义为Lp(a)异常,以此为标准,在中国约30%的既往有心血管事件的患者存在Lp(a)异常。2019年美国国家脂质协会推荐Lp(a)≥50mg/dl为水平升高,按照这个标准全球人口的20%均存在Lp(a)水平升高。尽管Lp(a)水平升高常见,但缺乏针对性治疗药物,迄今尚无靶向降低Lp(a)的药物获批用于临床。Lp(a)蛋白与多种脂蛋白结构相似,难以成为小分子和大分子药物的直接靶点,而Lp(a)基因转录的mRNA具有高专属性,可以通过siRNA转录后调控机制特异性降解其mRNA,进而抑制Lp(a)表达。因此设计靶向apo(a)基因(LPA)的siRNA使其表达减弱,从而降低血清中Lp(a)水平,进而降低心血管不良事件。The 2016 Chinese Adult Dyslipidemia Prevention and Treatment Guidelines define >30 mg/dl as Lp(a) abnormality. Based on this standard, approximately 30% of patients with past cardiovascular events in China have Lp(a) abnormality. In 2019, the U.S. National Lipid Association recommended that Lp(a) ≥ 50 mg/dl as elevated levels. According to this standard, 20% of the global population has elevated Lp(a) levels. Although elevated Lp(a) levels are common, there is a lack of targeted therapeutic drugs, and so far no drug that targets Lp(a) has been approved for clinical use. The Lp(a) protein is structurally similar to a variety of lipoproteins, making it difficult to become a direct target for small and large molecule drugs. However, the mRNA transcribed by the Lp(a) gene is highly specific and can be specifically degraded through the siRNA post-transcriptional regulation mechanism. Its mRNA, thereby inhibiting Lp(a) expression. Therefore, siRNA targeting the apo(a) gene (LPA) is designed to attenuate its expression, thereby reducing Lp(a) levels in serum, thereby reducing adverse cardiovascular events.
发明内容Contents of the invention
本公开提供了一种寡核苷酸,其包含5’末端化学修饰,所述5’末端化学修饰包含至少一个氘。The present disclosure provides an oligonucleotide comprising a 5' terminal chemical modification that includes at least one deuterium.
本公开提供一种寡核苷酸,其包含式(I)所示的5’末端化学修饰,或其互变异构体修饰,所述式(I)所示的5’末端化学修饰选自:
The present disclosure provides an oligonucleotide comprising a 5' end chemical modification represented by formula (I), or a tautomer modification thereof, wherein the 5' end chemical modification represented by formula (I) is selected from :
其中,RA1、RA2各自独立地选自氢或氘;M1、M2各自独立地选自-SH或-OH;B选自碱基、氢、氘;RA3选自氢、氘、羟基、卤素、烷基(例如C1、C2、C3、C4、C5、C6烷基,包括但不限于甲基、乙基、异丙基)、烷氧基(例如C1烷氧基、C2烷氧基、C3烷氧基、C4烷氧基、C5烷氧基、C6烷氧基,包括但不限于 甲氧基、乙氧基、丙氧基、异丙氧基),所述羟基、烷基、烷氧基各自任选被一个或多个氘所取代;RA4选自氢、氘、烷基(例如C1、C2、C3、C4、C5、C6烷基,包括但不限于甲基、乙基、异丙基),所述烷基各自任选被一个或多个氘所取代;条件是,式(I)中包含至少一个氘。Wherein, R A1 and R A2 are each independently selected from hydrogen or deuterium; M 1 and M 2 are each independently selected from -SH or -OH; B is selected from base, hydrogen, deuterium; R A3 is selected from hydrogen, deuterium, Hydroxy, halogen, alkyl (such as C1, C2, C3, C4, C5, C6 alkyl, including but not limited to methyl, ethyl, isopropyl), alkoxy (such as C1 alkoxy, C2 alkoxy base, C3 alkoxy group, C4 alkoxy group, C5 alkoxy group, C6 alkoxy group, including but not limited to Methoxy, ethoxy, propoxy, isopropoxy), each of the hydroxyl, alkyl, and alkoxy groups is optionally substituted by one or more deuteriums; R A4 is selected from hydrogen, deuterium, alkyl (For example, C1, C2, C3, C4, C5, C6 alkyl, including but not limited to methyl, ethyl, isopropyl), each of the alkyl groups is optionally substituted by one or more deuterium; provided that, Formula (I) contains at least one deuterium.
在一些实施方案中,RA3选自氢、氘。In some embodiments, R A3 is selected from hydrogen, deuterium.
在一些实施方案中,RA3选自卤素(如氟、氯、溴)。In some embodiments, R A3 is selected from halogen (e.g., fluorine, chlorine, bromine).
在一些实施方案中,RA3选自烷基(例如C1、C2、C3、C4、C5、C6烷基,包括但不限于甲基、乙基、异丙基),所述烷基各自任选被一个或多个氘所取代。In some embodiments, R A3 is selected from alkyl groups (e.g., C1, C2, C3, C4, C5, C6 alkyl, including but not limited to methyl, ethyl, isopropyl), each of which is optionally Replaced by one or more deuteriums.
在一些实施方案中,RA3选自烷氧基(例如C1烷氧基、C2烷氧基、C3烷氧基、C4烷氧基、C5烷氧基、C6烷氧基,包括但不限于甲氧基、乙氧基、丙氧基、异丙氧基),所述烷氧基各自任选被一个或多个氘所取代。In some embodiments, R A3 is selected from alkoxy (e.g., C1 alkoxy, C2 alkoxy, C3 alkoxy, C4 alkoxy, C5 alkoxy, C6 alkoxy, including but not limited to methyl oxy, ethoxy, propoxy, isopropoxy), each of the alkoxy groups is optionally substituted by one or more deuterium.
在一些实施方案中,式(I)所示的5’末端化学修饰选自:
In some embodiments, the 5' end chemical modification represented by Formula (I) is selected from:
其中,RA5、RA6、RA7各自独立地选自氢或氘;RA1、RA2、M1、M2、B如式(I)所定义;条件是,式(I-1)中包含至少一个氘。Among them, RA5 , RA6 and RA7 are each independently selected from hydrogen or deuterium; RA1 , RA2 , M1 , M2 and B are as defined in formula (I); the condition is that in formula (I-1) Contains at least one deuterium.
在一些实施方案中,RA5、RA6、RA7全部为氘;在一些实施方案中,RA5选自氘,RA6、RA7选自氢;在一些实施方案中,RA5、RA6选自氘,RA7选自氢。In some embodiments, RA5 , RA6 , and RA7 are all deuterium; in some embodiments, RA5 is selected from deuterium, and RA6 and RA7 are selected from hydrogen; in some embodiments, RA5 , RA6 Selected from deuterium, R A7 is selected from hydrogen.
在一些实施方案中,RA1选自氢,RA2选自氘;在一些实施方案中,RA1和RA2选自氘;在一些实施方案中,RA1和RA2选自氢。In some embodiments, RA1 is selected from hydrogen and RA2 is selected from deuterium; in some embodiments, RA1 and RA2 are selected from deuterium; in some embodiments, RA1 and RA2 are selected from hydrogen.
在一些实施方案中,式(I)所示的5’末端化学修饰选自:


In some embodiments, the 5' end chemical modification represented by Formula (I) is selected from:


B选自碱基或氢。B is selected from bases or hydrogen.
在一些实施方案中,B选自碱基;在一些具体的实施方案中,B选自腺嘌呤、鸟嘌呤、胞嘧啶、尿嘧啶或胸腺嘧啶。In some embodiments, B is selected from a base; in some specific embodiments, B is selected from adenine, guanine, cytosine, uracil, or thymine.
在一些具体的实施方案中,B是反义链的修饰的核苷酸对应位置的碱基。In some specific embodiments, B is the base corresponding to the modified nucleotide of the antisense strand.
在一些实施方案中,式(I)所示的5’末端化学修饰选自:In some embodiments, the 5' end chemical modification represented by formula (I) is selected from:
以及以腺嘌呤、鸟嘌呤、胞嘧啶、或胸腺嘧啶替换尿嘧啶的结构。 and structures in which uracil is replaced by adenine, guanine, cytosine, or thymine.
在一些实施方案中,本公开所述的寡核苷酸选自单链寡核苷酸、双链寡核苷酸反义寡核苷酸、小干扰RNA(siRNA)、双链RNA(dsRNA)、微RNA(miRNA)、短发夹RNA(shRNA)、核糖酶、RNAi抑制剂分子和Dicer酶底物。 In some embodiments, the oligonucleotides described in the present disclosure are selected from the group consisting of single-stranded oligonucleotides, double-stranded oligonucleotides, antisense oligonucleotides, small interfering RNA (siRNA), double-stranded RNA (dsRNA) , microRNA (miRNA), short hairpin RNA (shRNA), ribozymes, RNAi inhibitor molecules and Dicer enzyme substrates.
在一些实施方案中,本公开所述寡核苷酸是单链寡核苷酸。In some embodiments, the oligonucleotides of the present disclosure are single-stranded oligonucleotides.
在一些实施方案中,所述单链寡核苷酸是单链RNAi抑制剂分子。在一些实施方案中,所述单链RNAi抑制剂分子具有16至50个、16至45个、17至45个、17至40个、18至40个、18至35个、18至32个、18至31个、18至30个、18至29个、18至28个、18至27个、18至26个、18至25个、18至24个、18至23个、19至25个、19至24个、或19至23个核苷酸。In some embodiments, the single-stranded oligonucleotide is a single-stranded RNAi inhibitor molecule. In some embodiments, the single-stranded RNAi inhibitor molecules have 16 to 50, 16 to 45, 17 to 45, 17 to 40, 18 to 40, 18 to 35, 18 to 32, 18 to 31, 18 to 30, 18 to 29, 18 to 28, 18 to 27, 18 to 26, 18 to 25, 18 to 24, 18 to 23, 19 to 25, 19 to 24, or 19 to 23 nucleotides.
在一些实施方案中,本公开所述的寡核苷酸选自双链RNAi抑制剂分子。In some embodiments, oligonucleotides of the present disclosure are selected from double-stranded RNAi inhibitor molecules.
在一些实施方案中,本公开所述的寡核苷酸选自siRNA。In some embodiments, oligonucleotides of the present disclosure are selected from siRNA.
在一些实施方案中,本公开所述的寡核苷酸选自双链RNAi抑制剂分子,包含形成双链区的正义链与反义链。In some embodiments, oligonucleotides of the present disclosure are selected from double-stranded RNAi inhibitor molecules, including a sense strand and an antisense strand forming a double-stranded region.
在一些实施方案中,本公开所述的寡核苷酸选自siRNA,包含形成双链区的正义链与反义链。In some embodiments, the oligonucleotides described in the present disclosure are selected from siRNA, comprising a sense strand and an antisense strand forming a double-stranded region.
在一些实施方案中,式(I)所示的5’末端化学修饰,或其互变异构体修饰,位于反义链的5’末端。In some embodiments, the 5' end chemical modification represented by formula (I), or a tautomer modification thereof, is located at the 5' end of the antisense strand.
在一些具体的实施方案中,式(I)所示的5’末端化学修饰中,B是反义链的修饰的核苷酸对应位置的碱基。In some specific embodiments, in the chemical modification of the 5' end shown in formula (I), B is the base corresponding to the modified nucleotide of the antisense strand.
在一些实施方案中,本公开所述的寡核苷酸靶向乙型肝炎病毒(HBV)基因、载脂蛋白C3(ApoC3)基因、脂蛋白(a)(LPA)基因。In some embodiments, oligonucleotides of the present disclosure target the hepatitis B virus (HBV) gene, the apolipoprotein C3 (ApoC3) gene, the lipoprotein (a) (LPA) gene.
在一些实施方案中,本公开所述的寡核苷酸是靶向乙型肝炎病毒(HBV)基因的siRNA。In some embodiments, the oligonucleotides of the present disclosure are siRNAs targeting hepatitis B virus (HBV) genes.
在一些实施方案中,本公开所述的寡核苷酸是靶向HBV-S的siRNA。In some embodiments, the oligonucleotides of the present disclosure are siRNAs targeting HBV-S.
在一些实施方案中,本公开所述的寡核苷酸是靶向HBV-X的siRNA。In some embodiments, the oligonucleotides of the present disclosure are siRNAs targeting HBV-X.
在一些实施方案中,本公开所述的寡核苷酸是靶向载脂蛋白C3(ApoC3)基因的siRNA。In some embodiments, the oligonucleotides of the present disclosure are siRNAs targeting the apolipoprotein C3 (ApoC3) gene.
在一些实施方案中,本公开所述的寡核苷酸是靶向脂蛋白(a)(LPA)基因的siRNA。In some embodiments, the oligonucleotides of the present disclosure are siRNAs targeting the lipoprotein(a) (LPA) gene.
在一些实施方案中,本公开所述寡核苷酸、双链RNAi抑制剂分子或siRNA包含形成双链区的正义链与反义链,所述正义链包含至少15个连续核苷酸,且与SEQ ID NO:1的核苷酸序列相差不超过2个核苷酸(例如2个、1个)。在一些实施方案中,所述反义链包含至少15个连续核苷酸序列,且与SEQ ID NO:2的核苷酸序列相差不超过2个核苷酸(例如2个、1个)。In some embodiments, an oligonucleotide, double-stranded RNAi inhibitor molecule or siRNA of the present disclosure comprises a sense strand and an antisense strand forming a double-stranded region, the sense strand comprising at least 15 contiguous nucleotides, and The nucleotide sequence differs from the nucleotide sequence of SEQ ID NO: 1 by no more than 2 nucleotides (for example, 2, 1). In some embodiments, the antisense strand comprises at least 15 contiguous nucleotide sequences and differs from the nucleotide sequence of SEQ ID NO: 2 by no more than 2 nucleotides (e.g., 2, 1).
在一些实施方案中,正义链包含SEQ ID NO:1的至少15个连续核苷酸(例如15、16、17、18、19个)。在一些实施方案中,正义链包含SEQ ID NO:1的至少16个连续核苷酸。在一些实施方案中,正义链包含SEQ ID NO:1的至少18个连续核苷酸。在一些实施方案中,正义链包含SEQ ID NO:1的至少19个连续 核苷酸。In some embodiments, the sense strand comprises at least 15 contiguous nucleotides (eg, 15, 16, 17, 18, 19) of SEQ ID NO: 1. In some embodiments, the sense strand comprises at least 16 contiguous nucleotides of SEQ ID NO:1. In some embodiments, the sense strand comprises at least 18 contiguous nucleotides of SEQ ID NO:1. In some embodiments, the sense strand comprises at least 19 consecutive nucleotides of SEQ ID NO:1 Nucleotides.
在一些实施方案中,反义链包含SEQ ID NO:2的核苷酸序列至少15个连续核苷酸(例如15、16、17、18、19、20、21个)。在一些实施方案中,反义链包含SEQ ID NO:2的至少18个连续核苷酸。在一些实施方案中,反义链包含SEQ ID NO:2的至少19个连续核苷酸。在一些实施方案中,反义链包含SEQ ID NO:2的至少20个连续核苷酸。在一些实施方案中,反义链包含SEQ ID NO:2的至少21个连续核苷酸。In some embodiments, the antisense strand comprises at least 15 contiguous nucleotides (e.g., 15, 16, 17, 18, 19, 20, 21) of the nucleotide sequence of SEQ ID NO: 2. In some embodiments, the antisense strand comprises at least 18 contiguous nucleotides of SEQ ID NO:2. In some embodiments, the antisense strand comprises at least 19 contiguous nucleotides of SEQ ID NO: 2. In some embodiments, the antisense strand comprises at least 20 contiguous nucleotides of SEQ ID NO: 2. In some embodiments, the antisense strand comprises at least 21 contiguous nucleotides of SEQ ID NO: 2.
在一些实施方案中,所述正义链包含或选自SEQ ID NO:1所示的核苷酸序列。In some embodiments, the sense strand comprises or is selected from the nucleotide sequence set forth in SEQ ID NO: 1.
在一些实施方案中,所述反义链包含或选自SEQ ID NO:2所示的核苷酸序列。In some embodiments, the antisense strand comprises or is selected from the nucleotide sequence set forth in SEQ ID NO: 2.
在一些实施方案中,本公开所述的寡核苷酸,其包含SEQ ID NO:1所示的正义链和SEQ ID NO:2所示的反义链。In some embodiments, the oligonucleotide of the present disclosure includes the sense strand shown in SEQ ID NO: 1 and the antisense strand shown in SEQ ID NO: 2.
在一些实施方案中,本公开所述的寡核苷酸,所述正义链选自SEQ ID NO:1所示的核苷酸序列,所述反义链选自SEQ ID NO:2所示的核苷酸序列。In some embodiments, the oligonucleotide of the present disclosure, the sense strand is selected from the nucleotide sequence shown in SEQ ID NO: 1, and the antisense strand is selected from the nucleotide sequence shown in SEQ ID NO: 2 Nucleotide sequence.
在一些实施方案中,本公开所述的寡核苷酸,其选自SEQ ID NO:1所示的正义链和SEQ ID NO:2所示的反义链。In some embodiments, the oligonucleotide of the present disclosure is selected from the sense strand shown in SEQ ID NO: 1 and the antisense strand shown in SEQ ID NO: 2.
本公开中,按照5’-3’方向,In this disclosure, according to the 5’-3’ direction,
SEQ ID NO:1是GCUCCUUAUUGUUAUACGA;SEQ ID NO:1 is GCUCCUUAUUGUUAUACGA;
SEQ ID NO:2是UCGUAUAACAAUAAGGAGCUG。SEQ ID NO:2 is UCGUAUAACAAUAAGGAGCUG.
在一些实施方案中,反义链与靶序列至少部分地反向互补以介导RNA干扰;在在一些实施方案中,反义链与靶序列之间存在不多于5个、不多于4个、不多于3个、不多于2个、不多于1个错配;在在一些实施方案中,反义链与靶序列完全反向互补。In some embodiments, the antisense strand is at least partially reverse complementary to the target sequence to mediate RNA interference; in some embodiments, there are no more than 5, no more than 4, between the antisense strand and the target sequence. No more than 3, no more than 2, no more than 1 mismatch; in some embodiments, the antisense strand is completely reverse complementary to the target sequence.
在一些实施方案中,正义链与反义链至少部分地反向互补以形成双链区;在一些实施方案中,正义链与反义链之间存在不多于5个、不多于4个、不多于3个、不多于2个、不多于1个错配;在一些实施方案中,正义链与反义链完全反向互补。In some embodiments, the sense strand and the antisense strand are at least partially reverse complementary to form a double-stranded region; in some embodiments, there are no more than 5 and no more than 4 between the sense strand and the antisense strand. , no more than 3, no more than 2, no more than 1 mismatch; in some embodiments, the sense strand and the antisense strand are completely reverse complementary.
在一些实施方案中,本公开所述寡核苷酸选自siRNA,包含一个或两个平端。In some embodiments, oligonucleotides of the present disclosure are selected from siRNA and contain one or two blunt ends.
在一些具体的实施方案中,siRNA包含具有1至4个未配对核苷酸的突出端,例如1个、2个、3个、4个。In some specific embodiments, the siRNA contains overhangs with 1 to 4 unpaired nucleotides, such as 1, 2, 3, 4.
在一些实施方案中,本公开所述寡核苷酸选自siRNA,包含位于所述siRNA反义链3’端的突出端。In some embodiments, the oligonucleotides of the present disclosure are selected from siRNA and comprise an overhang located at the 3' end of the antisense strand of the siRNA.
在一些实施方案中,正义链的长度为15-35个核苷酸,反义链的长度为15-30个核苷酸。In some embodiments, the sense strand is 15-35 nucleotides in length and the antisense strand is 15-30 nucleotides in length.
在一些实施方案中,正义链和反义链各自独立地具有16至35个、16至34个、17至34个、17至33个、18至33个、18至32个、18至31个、18至30个、18 至29个、18至28个、18至27个、18至26个、18至25个、18至24个、18至23个、19至25个、19至24个、或19至23个核苷酸(例如19、20、21、22、23个核苷酸)。In some embodiments, the sense strand and the antisense strand each independently have 16 to 35, 16 to 34, 17 to 34, 17 to 33, 18 to 33, 18 to 32, 18 to 31 , 18 to 30, 18 to 29, 18 to 28, 18 to 27, 18 to 26, 18 to 25, 18 to 24, 18 to 23, 19 to 25, 19 to 24, or 19 to 23 cores nucleotides (e.g. 19, 20, 21, 22, 23 nucleotides).
在一些实施方案中,正义链和反义链长度相同或不同,所述正义链的长度为19-23个核苷酸,反义链的长度为19-26个核苷酸。这样,本公开提供的正义链和反义链的长度比可以是19/20、19/21、19/22、19/23、19/24、19/25、19/26、20/20、20/21、20/22、20/23、20/24、20/25、20/26、21/20、21/21、21/22、21/23、21/24、21/25、21/26、22/20、22/21、22/22、22/23、22/24、22/25、22/26、23/20、23/21、23/22、23/23、23/24、23/25或23/26。在一些实施方案中,所述正义链和反义链的长度比为19/21、21/23或23/25。在一些实施方案中,所述正义链和反义链的长度比为19/21。In some embodiments, the sense strand and antisense strand are the same or different in length, with the sense strand being 19-23 nucleotides in length and the antisense strand being 19-26 nucleotides in length. In this way, the length ratio of the sense strand and the antisense strand provided by the present disclosure can be 19/20, 19/21, 19/22, 19/23, 19/24, 19/25, 19/26, 20/20, 20 /21, 20/22, 20/23, 20/24, 20/25, 20/26, 21/20, 21/21, 21/22, 21/23, 21/24, 21/25, 21/26 ,22/20,22/21,22/22,22/23,22/24,22/25,22/26,23/20,23/21,23/22,23/23,23/24,23 /25 or 23/26. In some embodiments, the length ratio of the sense strand and antisense strand is 19/21, 21/23, or 23/25. In some embodiments, the length ratio of the sense strand and antisense strand is 19/21.
在一些实施方案中,本公开所述的寡核苷酸、双链RNAi抑制剂分子或siRNA不含有其他修饰的核苷酸。In some embodiments, the oligonucleotides, double-stranded RNAi inhibitor molecules, or siRNAs described in this disclosure contain no other modified nucleotides.
在一些实施方案中,本公开所述的寡核苷酸、双链RNAi抑制剂分子或siRNA中至少一个另外的核苷酸为修饰的核苷酸;在一些实施方案中,所述寡核苷酸、双链RNAi抑制剂分子或siRNA包含形成双链区的正义链与反义链,所述正义链和反义链分别包含至少一个核苷酸是修饰的核苷酸;在一些实施方案中,本公开所述正义链的全部核苷酸和所述反义链的全部核苷酸是修饰的核苷酸。In some embodiments, at least one additional nucleotide in an oligonucleotide, double-stranded RNAi inhibitor molecule, or siRNA of the present disclosure is a modified nucleotide; in some embodiments, the oligonucleotide Acid, double-stranded RNAi inhibitor molecule or siRNA comprises a sense strand and an antisense strand forming a double-stranded region, the sense strand and the antisense strand respectively comprising at least one nucleotide being a modified nucleotide; in some embodiments , all nucleotides of the sense strand and all nucleotides of the antisense strand of the present disclosure are modified nucleotides.
在一些实施方案中,修饰的核苷酸选自:2'-甲氧基修饰的核苷酸、2'-经取代的烷氧基修饰的核苷酸、2'-烷基修饰的核苷酸、2'-经取代的烷基修饰的核苷酸、2'-氨基修饰的核苷酸、2'-经取代的氨基修饰的核苷酸、2'-氟代修饰的核苷酸、2'-脱氧核苷酸、2'-脱氧-2'-氟代修饰的核苷酸、3'-脱氧-胸腺嘧啶(dT)核苷酸、异核苷酸、LNA、ENA、cET、UNA、GNA。In some embodiments, the modified nucleotides are selected from: 2'-methoxy modified nucleotides, 2'-substituted alkoxy modified nucleotides, 2'-alkyl modified nucleosides Acid, 2'-substituted alkyl modified nucleotide, 2'-amino modified nucleotide, 2'-substituted amino modified nucleotide, 2'-fluoro modified nucleotide, 2'-deoxynucleotide, 2'-deoxy-2'-fluoro modified nucleotide, 3'-deoxy-thymine (dT) nucleotide, isonucleotide, LNA, ENA, cET, UNA , GNA.
在一些实施方案中,修饰的核苷酸相互独立地选自:2'-甲氧基修饰的核苷酸、2'-氟代修饰的核苷酸。In some embodiments, the modified nucleotides are independently selected from the group consisting of: 2'-methoxy modified nucleotides, 2'-fluoro modified nucleotides.
在一些实施方案中,按照5'末端到3'末端的方向,所述正义链中位于5’端第7、8、9位的三个连续的核苷酸为2'-氟代修饰的核苷酸。在一些具体的实施方案中,正义链中位于5’端第7、8、9位的三个连续的核苷酸为2'-氟代修饰的核苷酸,正义链其余位置均为非2'-氟代修饰的核苷酸;在一些具体的实施方案中,正义链中位于5’端第7、8、9位的三个连续的核苷酸为2'-氟代修饰的核苷酸,正义链其余位置均为2'-甲氧基修饰的核苷酸。In some embodiments, in the direction from the 5' end to the 3' end, the three consecutive nucleotides located at positions 7, 8, and 9 at the 5' end of the sense strand are 2'-fluorinated modified cores. glycosides. In some specific embodiments, the three consecutive nucleotides at positions 7, 8, and 9 at the 5' end of the sense strand are 2'-fluoro modified nucleotides, and the remaining positions of the sense strand are non-2 '-fluorinated modified nucleotides; in some specific embodiments, the three consecutive nucleotides located at positions 7, 8, and 9 at the 5' end of the sense strand are 2'-fluorinated modified nucleosides acid, and the remaining positions of the sense strand are 2'-methoxy modified nucleotides.
在一些实施方案中,按照5'末端到3'末端的方向,所述反义链的第1位的核苷酸为本公开任一所述的式(I)所示的5’末端化学修饰的核苷酸;在一些具体的实 施方案中,式(I)所示的5’末端化学修饰的核苷酸为 所述B为反义链5'末端第1位核苷酸对应位置的碱基。In some embodiments, in the direction from the 5' end to the 3' end, the nucleotide at position 1 of the antisense strand is a 5' end chemical modification represented by formula (I) according to any one of the present disclosure. nucleotides; in some specific implementations In an embodiment, the 5' end chemically modified nucleotide represented by formula (I) is The B is the base corresponding to the first nucleotide at the 5' end of the antisense strand.
在一些实施方案中,按照5'末端到3'末端的方向,反义链中位于第2、4、6、10、12、14、16和18位的核苷酸各自独立地为2'-氟代修饰的核苷酸,反义链其余位置均为非2'-氟代修饰的核苷酸。在一些具体的实施方案中,按照5'末端到3'末端的方向,反义链中位于第2、4、6、10、12、14、16和18位的核苷酸各自独立地为2'-氟代修饰的核苷酸,反义链其余位置均为2'-甲氧基修饰的核苷酸。In some embodiments, in the direction from the 5' end to the 3' end, the nucleotides at positions 2, 4, 6, 10, 12, 14, 16, and 18 of the antisense strand are each independently 2'- Fluorinated modified nucleotides, the remaining positions of the antisense strand are non-2'-fluorinated modified nucleotides. In some specific embodiments, in the direction from the 5' end to the 3' end, the nucleotides at positions 2, 4, 6, 10, 12, 14, 16 and 18 in the antisense strand are each independently 2 '-Fluoro-modified nucleotides, and the remaining positions of the antisense strand are 2'-methoxy-modified nucleotides.
在一些实施方案中,本公开所述的寡核苷酸包含至少一个磷酸酯基为具有修饰基团的磷酸酯基,在一些实施方案中,包含至少一个磷酸酯基为硫代磷酸二酯基。In some embodiments, oligonucleotides of the present disclosure comprise at least one phosphate group that is a phosphate group with a modifying group, and in some embodiments, at least one phosphate group is a phosphorothioate diester group. .
在一些实施方案中,正义链和/或反义链中至少一个磷酸酯基为具有修饰基团的磷酸酯基,在一些实施方案中,正义链和/或反义链中至少一个磷酸酯基为硫代磷酸二酯基。In some embodiments, at least one phosphate group in the sense strand and/or antisense strand is a phosphate group with a modifying group. In some embodiments, at least one phosphate group in the sense strand and/or antisense strand It is a phosphorothioate diester group.
在一些实施方案中,所述硫代磷酸二酯基存在于以下位置中的至少一处:In some embodiments, the phosphorothioate diester group is present at at least one of the following positions:
所述正义链的5'端第1个核苷酸和第2个核苷酸之间;Between the first nucleotide and the second nucleotide at the 5' end of the sense strand;
所述正义链的5'端第2个核苷酸和第3个核苷酸之间;Between the second and third nucleotides at the 5' end of the sense strand;
所述正义链的3'端第1个核苷酸和第2个核苷酸之间;Between the first nucleotide and the second nucleotide at the 3' end of the sense strand;
所述正义链的3'端第1个核苷酸末端;The first nucleotide end of the 3' end of the sense strand;
所述反义链的5'端第1个核苷酸和第2个核苷酸之间;Between the first nucleotide and the second nucleotide at the 5' end of the antisense strand;
所述反义链的5'端第2个核苷酸和第3个核苷酸之间;Between the 2nd nucleotide and the 3rd nucleotide at the 5' end of the antisense strand;
所述反义链的3'端第1个核苷酸和第2个核苷酸之间;Between the first nucleotide and the second nucleotide at the 3' end of the antisense strand;
所述反义链的3'端第2个核苷酸和第3个核苷酸之间;或,Between the 2nd nucleotide and the 3rd nucleotide at the 3' end of the antisense strand; or,
所述反义链的3'端第1个核苷酸末端。The first nucleotide end of the 3' end of the antisense strand.
在一些实施方案中,所述硫代磷酸二酯基存在于:In some embodiments, the phosphorothioate diester group is present in:
所述正义链的5'端第1个核苷酸和第2个核苷酸之间。Between the 1st and 2nd nucleotide at the 5' end of the sense strand.
在一些实施方案中,所述硫代磷酸二酯基存在于: In some embodiments, the phosphorothioate diester group is present in:
所述正义链的5'端第1个核苷酸和第2个核苷酸之间,和,Between the 1st nucleotide and the 2nd nucleotide at the 5' end of the sense strand, and,
所述正义链的5'端第2个核苷酸和第3个核苷酸之间。Between the 2nd and 3rd nucleotides at the 5' end of the sense strand.
在一些实施方案中,所述硫代磷酸二酯基存在于:In some embodiments, the phosphorothioate diester group is present in:
所述正义链的5'端第1个核苷酸和第2个核苷酸之间,和between the 1st and 2nd nucleotides at the 5' end of the sense strand, and
所述正义链的5'端第2个核苷酸和第3个核苷酸之间,和between the 2nd and 3rd nucleotides at the 5' end of the sense strand, and
所述正义链的3'端第1个核苷酸和第2个核苷酸之间。Between the first and second nucleotides at the 3' end of the sense strand.
在一些实施方案中,所述硫代磷酸二酯基存在于:In some embodiments, the phosphorothioate diester group is present in:
所述正义链的5'端第1个核苷酸和第2个核苷酸之间;和,Between the first nucleotide and the second nucleotide at the 5' end of the sense strand; and,
所述正义链的3'端第1个核苷酸末端。The first nucleotide end of the 3' end of the sense strand.
在一些实施方案中,所述硫代磷酸二酯基存在于:In some embodiments, the phosphorothioate diester group is present in:
所述正义链的5'端第1个核苷酸和第2个核苷酸之间;Between the first nucleotide and the second nucleotide at the 5' end of the sense strand;
所述正义链的5'端第2个核苷酸和第3个核苷酸之间;和,Between the 2nd and 3rd nucleotides at the 5' end of the sense strand; and,
所述正义链的3'端第1个核苷酸末端。The first nucleotide end of the 3' end of the sense strand.
在一些实施方案中,所述硫代磷酸二酯基存在于:In some embodiments, the phosphorothioate diester group is present in:
所述正义链的3'端第1个核苷酸末端。The first nucleotide end of the 3' end of the sense strand.
在一些实施方案中,所述硫代磷酸二酯基存在于:In some embodiments, the phosphorothioate diester group is present in:
所述反义链的5'端第1个核苷酸和第2个核苷酸之间;Between the first nucleotide and the second nucleotide at the 5' end of the antisense strand;
所述反义链的5'端第2个核苷酸和第3个核苷酸之间;Between the 2nd nucleotide and the 3rd nucleotide at the 5' end of the antisense strand;
所述反义链的3'端第1个核苷酸和第2个核苷酸之间;和,Between the first nucleotide and the second nucleotide at the 3' end of the antisense strand; and,
所述反义链的3'端第2个核苷酸和第3个核苷酸之间。Between the second and third nucleotides at the 3' end of the antisense strand.
在一些具体的实施方案中,所述正义链包含SEQ ID NO:3或SEQ ID NO:4所示的核苷酸序列。In some specific embodiments, the sense strand comprises the nucleotide sequence shown in SEQ ID NO:3 or SEQ ID NO:4.
在一些具体的实施方案中,所述反义链包含SEQ ID NO:5所示的核苷酸序列。In some specific embodiments, the antisense strand comprises the nucleotide sequence shown in SEQ ID NO:5.
在一些具体的实施方案中,所述正义链选自SEQ ID NO:3或SEQ ID NO:4所示的核苷酸序列。In some specific embodiments, the sense strand is selected from the nucleotide sequence shown in SEQ ID NO:3 or SEQ ID NO:4.
在一些具体的实施方案中,所述反义链选自SEQ ID NO:5所示的核苷酸序列。In some specific embodiments, the antisense strand is selected from the nucleotide sequence shown in SEQ ID NO:5.
在一些具体的实施方案中,本公开所述的寡核苷酸的正义链包含SEQ ID NO:3,且反义链包含SEQ ID NO:5。In some specific embodiments, the sense strand of an oligonucleotide of the present disclosure includes SEQ ID NO: 3, and the antisense strand includes SEQ ID NO: 5.
在一些具体的实施方案中,本公开所述的寡核苷酸的正义链包含SEQ ID NO:4,且反义链包含SEQ ID NO:5。In some specific embodiments, the sense strand of an oligonucleotide of the present disclosure includes SEQ ID NO: 4, and the antisense strand includes SEQ ID NO: 5.
在一些具体的实施方案中,本公开所述的寡核苷酸正义链选自SEQ ID NO:3,且反义链选自SEQ ID NO:5。In some specific embodiments, the sense strand of the oligonucleotide described in the present disclosure is selected from SEQ ID NO: 3, and the antisense strand is selected from SEQ ID NO: 5.
在一些具体的实施方案中,本公开所述的寡核苷酸正义链选自SEQ ID NO:4,且反义链选自SEQ ID NO:5。In some specific embodiments, the sense strand of the oligonucleotide described in the present disclosure is selected from SEQ ID NO: 4, and the antisense strand is selected from SEQ ID NO: 5.
在一些具体的实施方案中,本公开所述的寡核苷酸选自以下任一项: In some specific embodiments, the oligonucleotides described in the present disclosure are selected from any of the following:
有义链包含SEQ ID NO:3所示的核苷酸序列,并且反义链包含SEQ ID NO:5所示的核苷酸序列;The sense strand includes the nucleotide sequence shown in SEQ ID NO:3, and the antisense strand includes the nucleotide sequence shown in SEQ ID NO:5;
有义链包含SEQ ID NO:4所示的核苷酸序列,并且反义链包含SEQ ID NO:5所示的核苷酸序列。The sense strand includes the nucleotide sequence shown in SEQ ID NO:4, and the antisense strand includes the nucleotide sequence shown in SEQ ID NO:5.
在一些具体的实施方案中,本公开所述的寡核苷酸选自以下任一项:In some specific embodiments, the oligonucleotides described in the present disclosure are selected from any of the following:
有义链是SEQ ID NO:3所示的核苷酸序列,并且反义链是SEQ ID NO:5所示的核苷酸序列;The sense strand is the nucleotide sequence shown in SEQ ID NO:3, and the antisense strand is the nucleotide sequence shown in SEQ ID NO:5;
有义链是SEQ ID NO:4所示的核苷酸序列,并且反义链是SEQ ID NO:5所示的核苷酸序列。The sense strand is the nucleotide sequence shown in SEQ ID NO:4, and the antisense strand is the nucleotide sequence shown in SEQ ID NO:5.
本公开中,按照5’-3’方向,In this disclosure, according to the 5’-3’ direction,
SEQ ID NO:3是GmsCmsUmCmCmUmUfAfUfUmGmUmUmAmUmAmCmGmAm;SEQ ID NO:3 is GmsCmsUmCmCmUmUfAfUfUmGmUmUmAmUmAmCmGmAm;
SEQ ID NO:4是GmsCmsUmCmCmUmUfAfUfUmGmUmUmAmUmAmCmGmsAm;SEQ ID NO:4 is GmsCmsUmCmCmUmUfAfUfUmGmUmUmAmUmAmCmGmsAm;
SEQ ID NO:5是NA0127CfsGmUfAmUfAmAmCmAfAmUfAmAfGmGfAmGfCmsUmsGm;SEQ ID NO:5 is NA0127CfsGmUfAmUfAmAmCmAfAmUfAmAfGmGfAmGfCmsUmsGm;
其中,Af=腺嘌呤2'-F核糖核苷(adenine 2'-F ribonucleoside);Cf=胞嘧啶2'-F核糖核苷(cytosine 2'-F ribonucleoside);Uf=尿嘧啶2'-F核糖核苷(uracil 2'-F ribonucleoside);Gf=鸟嘌呤2'-F核糖核苷(guanine 2'-F ribonucleoside);Am=腺嘌呤2'-OMe核糖核苷(adenine 2'-OMe ribonucleoside);Cm=胞嘧啶2'-OMe核糖核苷(cytosine 2'-OMe ribonucleoside);Gm=鸟嘌呤2'-OMe核糖核苷(guanine2'-OMe ribonucleoside);Um=尿嘧啶2'-OMe核糖核苷(uracil 2'-OMe ribonucleoside);Among them, Af = adenine 2'-F ribonucleoside (adenine 2'-F ribonucleoside); Cf = cytosine 2'-F ribonucleoside (cytosine 2'-F ribonucleoside); Uf = uracil 2'-F Ribonucleoside (uracil 2'-F ribonucleoside); Gf=guanine 2'-F ribonucleoside (guanine 2'-F ribonucleoside); Am=adenine 2'-OMe ribonucleoside (adenine 2'-OMe ribonucleoside ); Cm=cytosine 2'-OMe ribonucleoside; Gm=guanine 2'-OMe ribonucleoside; Um=uracil 2'-OMe ribose Nucleoside (uracil 2'-OMe ribonucleoside);
s表示与该字母s左右相邻的两个核苷酸之间为硫代磷酸二酯基连接;s means that the two nucleotides adjacent to the left and right of the letter s are connected by phosphorothioate diester groups;
NA0127表示 NA0127 means
在一些实施方案中,本公开所述的寡核苷酸还包含靶向配体;在一些实施方案中,所述靶向配体靶向肝脏;在一些实施方案中,所述靶向配体结合脱唾液酸糖蛋白受体(ASGPR);在一些实施方案中,所述靶向配体包括半乳糖簇或半乳糖衍生物簇,所述半乳糖衍生物选自N-乙酰基-半乳糖胺、N-三氟乙酰基半乳糖胺、N- 丙酰基半乳糖胺、N-正丁酰基半乳糖胺、N-乙酰基-半乳糖胺三乙酸酯或N-异丁酰基半乳糖胺。In some embodiments, the oligonucleotides of the present disclosure further comprise a targeting ligand; in some embodiments, the targeting ligand targets the liver; in some embodiments, the targeting ligand Binds to the asialoglycoprotein receptor (ASGPR); in some embodiments, the targeting ligand includes a cluster of galactose or a cluster of galactose derivatives selected from N-acetyl-galactose Amine, N-trifluoroacetylgalactosamine, N- Propionylgalactosamine, N-n-butyrylgalactosamine, N-acetyl-galactosamine triacetate or N-isobutyrylgalactosamine.
在一些实施方案中,所述靶向配体包括3个半乳糖簇或半乳糖衍生物簇。In some embodiments, the targeting ligand includes 3 galactose clusters or galactose derivative clusters.
在一些实施方案中,所述靶向配体共价或非共价连接至所述寡核苷酸。In some embodiments, the targeting ligand is covalently or non-covalently linked to the oligonucleotide.
在一些实施方案中,所述靶向配体通过磷酸二酯基团、硫代磷酸二酯基团或膦酸基团与寡核苷酸、双链RNAi抑制剂分子或siRNA的末端连接。In some embodiments, the targeting ligand is linked to the terminus of an oligonucleotide, double-stranded RNAi inhibitor molecule, or siRNA via a phosphodiester group, a phosphorothioate diester group, or a phosphonic acid group.
在一些实施方案中,所述靶向配体通过磷酸二酯基团、硫代磷酸二酯基团或膦酸基团与寡核苷酸、双链RNAi抑制剂分子或siRNA的末端间接连接。In some embodiments, the targeting ligand is indirectly linked to the terminus of an oligonucleotide, double-stranded RNAi inhibitor molecule, or siRNA through a phosphodiester group, a phosphorothioate diester group, or a phosphonic acid group.
在一些实施方案中,所述靶向配体通过磷酸二酯基团、硫代磷酸二酯基团或膦酸基团与寡核苷酸、双链RNAi抑制剂分子或siRNA的末端直接连接。In some embodiments, the targeting ligand is directly linked to the terminus of an oligonucleotide, double-stranded RNAi inhibitor molecule, or siRNA via a phosphodiester group, a phosphorothioate diester group, or a phosphonic acid group.
在一些实施方案中,所述靶向配体通过磷酸二酯基团或硫代磷酸二酯基团与寡核苷酸、双链RNAi抑制剂分子或siRNA的末端直接连接。In some embodiments, the targeting ligand is directly linked to the terminus of an oligonucleotide, double-stranded RNAi inhibitor molecule, or siRNA via a phosphodiester group or a phosphorothioate diester group.
在一些实施方案中,所述靶向配体通过磷酸二酯基团或硫代磷酸二酯基团与寡核苷酸、双链RNAi抑制剂分子或siRNA的正义链3’末端直接连接。In some embodiments, the targeting ligand is directly linked to the 3' end of the sense strand of the oligonucleotide, double-stranded RNAi inhibitor molecule, or siRNA via a phosphodiester group or a phosphorothioate diester group.
在一些实施方案中,所述靶向配体选自式(II’)所示结构或其药学上可接受的盐:
In some embodiments, the targeting ligand is selected from the structure represented by formula (II') or a pharmaceutically acceptable salt thereof:
其中,L1为C1-C30烷基链、或包含被一个或多个氧、硫、氮原子或C=O间断的C1-C30烷基链;Wherein, L 1 is a C 1 -C 30 alkyl chain, or a C 1 -C 30 alkyl chain interrupted by one or more oxygen, sulfur, nitrogen atoms or C=O;
R1和R2独立地为化学键、NR6、C=O或-OC(=O)-;R 1 and R 2 are independently chemical bonds, NR 6 , C=O or -OC(=O)-;
Q为 Q is
为单键或双键,且当为单键时,R3独立地为CR7R8、NR6、O或S,当为双键时,R3独立地为CR9或N; is a single bond or a double bond, and when When it is a single bond, R 3 is independently CR 7 R 8 , NR 6 , O or S. When it is a double bond, R 3 is independently CR 9 or N;
R4独立地为CR9或N;R 4 is independently CR 9 or N;
环A为存在或不存在的环烷基、杂环基、芳基或杂芳基,且当环A存在时,R5独立地为CR9或N,当环A不存在时,R5独立地为CR7R8、NR6或O;Ring A is cycloalkyl, heterocyclyl, aryl or heteroaryl, which may or may not be present, and when Ring A is present, R 5 is independently CR 9 or N, when Ring A is absent, R 5 is independently The ground is CR 7 R 8 , NR 6 or O;
R6和R9独立地为氢、氘、烷基、烷氧基、环烷基、杂环基、芳基、杂芳基、SR'、S(=O)R'、S(=O)2R'、S(=O)2NR'(R”)、NR'(R”)、C(=O)R'、C(=O)OR'或C(=O)NR'(R”),所述烷基、烷氧基、环烷基、杂环基、芳基或杂芳基任选被一个或多个选自卤素(如氟、氯、溴)、羟基、氧代、硝基、氰基、C1-6烷基、C1-6烷氧 基、C3-7环烷基、3-12元杂环基、5-12元芳基、5-12元杂芳基、SR'、S(=O)R'、S(=O)2R'、S(=O)2NR'(R”)、NR'(R”)、C(=O)R'、C(=O)OR'和C(=O)NR'(R”)中的基团所取代;R 6 and R 9 are independently hydrogen, deuterium, alkyl, alkoxy, cycloalkyl, heterocyclyl, aryl, heteroaryl, SR', S(=O)R', S(=O) 2 R', S(=O) 2 NR'(R”), NR'(R”), C(=O)R’, C(=O)OR’ or C(=O)NR’(R” ), the alkyl, alkoxy, cycloalkyl, heterocyclyl, aryl or heteroaryl group is optionally substituted by one or more halogens (such as fluorine, chlorine, bromine), hydroxyl, oxo, nitro group, cyano group, C 1-6 alkyl, C 1-6 alkoxy Base, C 3-7 cycloalkyl, 3-12 membered heterocyclyl, 5-12 membered aryl, 5-12 membered heteroaryl, SR', S(=O)R', S(=O) 2 R', S(=O) 2 NR'(R"), NR'(R"), C(=O)R', C(=O)OR' and C(=O)NR'(R") Replaced by groups in;
R7和R8独立地为氢、氘、烷基、烷氧基、环烷基、杂环基、芳基、杂芳基、SR'、S(=O)R'、S(=O)2R'、S(=O)2NR'(R”)、NR'(R”)、C(=O)R'、C(=O)OR'或C(=O)NR'(R”),所述烷基、烷氧基、环烷基、杂环基、芳基或杂芳基任选被一个或多个选自卤素(如氟、氯、溴)、羟基、氧代、硝基、氰基、C1-6烷基、C1-6烷氧基、C3-7环烷基、3-12元杂环基、5-12元芳基、5-12元杂芳基、SR'、S(=O)R'、S(=O)2R'、S(=O)2NR'(R”)、NR'(R”)、C(=O)R'、C(=O)OR'和C(=O)NR'(R”)中的基团所取代;R 7 and R 8 are independently hydrogen, deuterium, alkyl, alkoxy, cycloalkyl, heterocyclyl, aryl, heteroaryl, SR', S(=O)R', S(=O) 2 R', S(=O) 2 NR'(R”), NR'(R”), C(=O)R’, C(=O)OR’ or C(=O)NR’(R” ), the alkyl, alkoxy, cycloalkyl, heterocyclyl, aryl or heteroaryl group is optionally substituted by one or more halogens (such as fluorine, chlorine, bromine), hydroxyl, oxo, nitro group, cyano group, C 1-6 alkyl group, C 1-6 alkoxy group, C 3-7 cycloalkyl group, 3-12 membered heterocyclyl group, 5-12 membered aryl group, 5-12 membered heteroaryl group , SR', S(=O)R', S(=O) 2 R', S(=O) 2 NR'(R”), NR'(R”), C(=O)R', C Substituted by groups in (=O)OR' and C(=O)NR'(R”);
R'和R”独立地为氢、氘、羟基、烷基、烷氧基、环烷基、杂环基、芳基或杂芳基,所述烷基、烷氧基、环烷基、杂环基、芳基或杂芳基任选被一个或多个选自卤素(如氟、氯、溴)、羟基、氧代、硝基和氰基中的取代基所取代;R' and R" are independently hydrogen, deuterium, hydroxyl, alkyl, alkoxy, cycloalkyl, heterocyclyl, aryl or heteroaryl, said alkyl, alkoxy, cycloalkyl, hetero The cyclic group, aryl or heteroaryl group is optionally substituted by one or more substituents selected from halogen (such as fluorine, chlorine, bromine), hydroxyl, oxo, nitro and cyano;
m、n、p和q独立地为0、1、2、3或4;m, n, p and q are independently 0, 1, 2, 3 or 4;
B为 B is
Rb1、Rb2、Rb3、Rb4、Rb5、Rb6和Rb7独立地为-C(=O)-、-NHC(=O)-、-C(=O)O-、-C(=O)-(CH2)z8-O-或-NHC(=O)-(CH2)z9-O-;R b1 , R b2 , R b3 , R b4 , R b5 , R b6 and R b7 are independently -C(=O)-, -NHC(=O)-, -C(=O)O-, -C (=O)-(CH 2 ) z8 -O- or -NHC(=O)-(CH 2 ) z9 -O-;
z1、z2、z3、z4、z5、z6、z7、z8和z9独立地为0-10的整数;z1, z2, z3, z4, z5, z6, z7, z8 and z9 are independently integers from 0 to 10;
L2为C1-C30烷基链、或包含被一个或多个氧、硫、氮原子或C=O间断的C1-C30烷基链;L 2 is a C 1 -C 30 alkyl chain, or contains a C 1 -C 30 alkyl chain interrupted by one or more oxygen, sulfur, nitrogen atoms or C=O;
G为与细胞受体结合的靶向部分;G is the targeting moiety that binds to cell receptors;
r为1-10的整数。r is an integer from 1 to 10.
在一些实施方案中,某些基团的定义如下,未定义的基团同前任一方案所述(以下简称“在一些实施方案中”),L1可为L3或L3-R10-R11-L3,其中,L3独立地为C1-C12烷基链、-(CH2)j1-C(=O)-(CH2)j2-或-(CH2)j3-(CH2CH2O)1-4-(CH2)j4-,R10和R11独立地为化学键、-NR12-、-C(=O)-或-OC(=O)-,R12为氢或C1-C12烷基,j1、j2、j3和j4独立地为0-10的整数,优选0-2或4-10的整数,更优选0、1、2、6、7、8、9或10。In some embodiments, certain groups are defined as follows, undefined groups are as described in the previous embodiment (hereinafter referred to as "in some embodiments"), L 1 can be L 3 or L 3 -R 10 - R 11 -L 3 , where L 3 is independently a C 1 -C 12 alkyl chain, -(CH 2 ) j1 -C(=O)-(CH 2 ) j2 - or -(CH 2 ) j3 -( CH 2 CH 2 O) 1-4 -(CH 2 ) j4 -, R 10 and R 11 are independently chemical bonds, -NR 12 -, -C(=O)- or -OC(=O)-, R 12 is hydrogen or C 1 -C 12 alkyl, j1, j2, j3 and j4 are independently an integer of 0-10, preferably an integer of 0-2 or 4-10, more preferably 0, 1, 2, 6, 7, 8, 9 or 10.
在一些实施方案中,L1可为-(CH2)j1-C(=O)-(CH2)j2-,j1和j2的定义同前任一方案所述。In some embodiments, L 1 can be -(CH 2 ) j1 -C(=O)-(CH 2 ) j2 -, j1 and j2 are as defined in the previous embodiment.
在一些实施方案中,L1可为j1和j2的定义同前任一方案所述,其中,a1端与B相连,b1端与R1相连。 In some embodiments, L can be The definitions of j1 and j2 are the same as in the previous scheme, in which the a1 end is connected to B and the b1 end is connected to R 1 .
在一些实施方案中,L1可为 其中,a1端与B相连,b1端与R1相连。In some embodiments, L can be Among them, the a1 end is connected to B, and the b1 end is connected to R 1 .
在一些实施方案中,R1可为化学键且R2可为C=O。In some embodiments, R1 can be a chemical bond and R2 can be C=O.
在一些实施方案中,R1可为化学键且R2可为NR6,R6的定义同前任一方案所述。In some embodiments, R 1 can be a chemical bond and R 2 can be NR 6 , and R 6 is as defined in the previous embodiment.
在一些实施方案中,R1可为化学键且R2可为-OC(=O)-。In some embodiments, R 1 can be a chemical bond and R 2 can be -OC(=O)-.
在一些实施方案中,R1可为NR6且R2可为C=O,R6的定义同前任一方案所述。In some embodiments, R 1 can be NR 6 and R 2 can be C=O, and R 6 is as defined in the previous embodiment.
在一些实施方案中,R1可为NR6且R2可为-OC(=O)-,R6的定义同前任一方案所述。In some embodiments, R 1 can be NR 6 and R 2 can be -OC(=O)-, and R 6 is as defined in the previous embodiment.
在一些实施方案中,R2可为NR6且R1可为C=O,R6的定义同前任一方案所述。In some embodiments, R 2 can be NR 6 and R 1 can be C=O, and R 6 is as defined in the previous embodiment.
在一些实施方案中,R2可为NR6且R1可为-OC(=O)-,R6的定义同前任一方案所述。In some embodiments, R 2 can be NR 6 and R 1 can be -OC(=O)-, and R 6 is as defined in the previous embodiment.
在一些实施方案中,R6可为氢或C1-6烷基。In some embodiments, R6 can be hydrogen or C1-6 alkyl.
在一些实施方案中,R6可为氢、甲基、乙基、丙基或异丙基。In some embodiments, R6 can be hydrogen, methyl, ethyl, propyl, or isopropyl.
在一些实施方案中,R6可为氢。In some embodiments, R6 can be hydrogen.
在一些实施方案中,R7和R8可为氢。In some embodiments, R7 and R8 can be hydrogen.
在一些实施方案中,R9可为氢。In some embodiments, R 9 can be hydrogen.
在一些实施方案中,环A存在时,环A可为C1-10芳基,优选苯基。In some embodiments, Ring A, when present, can be C 1-10 aryl, preferably phenyl.
在一些实施方案中,m可为0或1。In some embodiments, m can be 0 or 1.
在一些实施方案中,m可为3。In some embodiments, m can be 3.
在一些实施方案中,n可为0或1。In some embodiments, n can be 0 or 1.
在一些实施方案中,p和q独立地为0或1。In some embodiments, p and q are independently 0 or 1.
在一些实施方案中,p=1且q=1。In some embodiments, p=1 and q=1.
在一些实施方案中,p=1且q=0。In some embodiments, p=1 and q=0.
在一些实施方案中,p=0且q=1。In some embodiments, p=0 and q=1.
在一些实施方案中,p=0且q=0。In some embodiments, p=0 and q=0.
在一些实施方案中,z1、z2、z3、z4、z5、z6、z7、z8和z9可独立地为0-4的整数,优选0、1或2。 In some embodiments, z1, z2, z3, z4, z5, z6, z7, z8, and z9 may independently be an integer from 0 to 4, preferably 0, 1, or 2.
在一些实施方案中,B可为Rb1、Rb2、Rb3和Rb4独立地为-C(=O)-或-NHC(=O)-,N原子与L1相连,z1、z2、z3和z4的定义同前任一方案所述。In some embodiments, B can be R b1 , R b2 , R b3 and R b4 are independently -C(=O)- or -NHC(=O)-, the N atom is connected to L 1 , and the definitions of z1, z2, z3 and z4 are the same as in the previous scheme. described.
在一些实施方案中,B可为Rb1、Rb2、Rb3和Rb4独立地为-C(=O)-或-NHC(=O)-,N原子与L1相连,Rb1、Rb3和Rb4相同,z1、z2、z3和z4的定义同前任一方案所述。In some embodiments, B can be R b1 , R b2 , R b3 and R b4 are independently -C(=O)- or -NHC(=O)-, the N atom is connected to L 1 , R b1 , R b3 and R b4 are the same, z1 and z2 The definitions of , z3 and z4 are the same as those described in the previous scheme.
在一些实施方案中,B可为 In some embodiments, B can be
在一些实施方案中,B可为 In some embodiments, B can be
在一些实施方案中,B可为Rb5、Rb6和Rb7独立地为-C(=O)-(CH2)z8-O-或-NHC(=O)-(CH2)z9-O-,N原子与L1相连,z5、z6、z7、z8和z9的定义同前任一方案所述。 In some embodiments, B can be R b5 , R b6 and R b7 are independently -C(=O)-(CH 2 ) z8 -O- or -NHC(=O)-(CH 2 ) z9 -O-, and the N atom is connected to L 1 , The definitions of z5, z6, z7, z8 and z9 are the same as in the previous scheme.
在一些实施方案中,B可为Rb5、Rb6和Rb7独立地为-C(=O)-(CH2)z8-O-或-NHC(=O)-(CH2)z9-O-,N原子与L1相连,Rb5、Rb6和Rb7相同,z5、z6、z7、z8和z9的定义同前任一方案所述。In some embodiments, B can be R b5 , R b6 and R b7 are independently -C(=O)-(CH 2 ) z8 -O- or -NHC(=O)-(CH 2 ) z9 -O-, and the N atom is connected to L 1 , R b5 , R b6 and R b7 are the same, and the definitions of z5, z6, z7, z8 and z9 are the same as in the previous scheme.
在一些实施方案中,B可为 In some embodiments, B can be
在一些实施方案中,L2可为L4或L4-R13-R14-L4,其中,L4独立地为C1-C12烷基链或-(CH2)j5-(OCH2CH2)1-4-(CH2)j6-,R13和R14独立地为化学键、-NR15-、-C(=O)-或-OC(=O)-,R15独立地为氢或C1-C12烷基,j5和j6独立地为0-10的整数,优选0-6的整数,更优选0、1、2、3或4。In some embodiments, L 2 can be L 4 or L 4 -R 13 -R 14 -L 4 , wherein L 4 is independently a C 1 -C 12 alkyl chain or -(CH 2 ) j 5 -(OCH 2 CH 2 ) 1-4 -(CH 2 ) j6 -, R 13 and R 14 are independently chemical bonds, -NR 15 -, -C(=O)- or -OC(=O)-, R 15 is independently is hydrogen or C 1 -C 12 alkyl, j5 and j6 are independently an integer from 0 to 10, preferably an integer from 0 to 6, more preferably 0, 1, 2, 3 or 4.
在一些实施方案中,L2可为-(CH2)j5-(OCH2CH2)1-4-(CH2)j6-,j5和j6的定义同前任一方案所述。In some embodiments, L 2 can be -(CH 2 ) j5 -(OCH 2 CH 2 ) 1-4 -(CH 2 ) j6 -, j5 and j6 are as defined in the previous embodiment.
在一些实施方案中,L2可为 其中,O原子与G相连,C原子与B相连,优选L2 In some embodiments, L2 can be Among them, the O atom is connected to G, the C atom is connected to B, and preferably L 2 is
在一些实施方案中,L2可为其中,j6的定义同前任一方案所述,O原子与G相连,C原子与B相连。In some embodiments, L2 can be Among them, the definition of j6 is the same as described in the previous scheme, O atom is connected to G, and C atom is connected to B.
在一些实施方案中,L2可为其中,O原子与G相连,C原子与B相连。In some embodiments, L2 can be Among them, the O atom is connected to G, and the C atom is connected to B.
在一些实施方案中,G可为去唾液酸糖蛋白受体靶向部分。In some embodiments, G can be an asialoglycoprotein receptor targeting moiety.
在一些实施方案中,G可为半乳糖、半乳糖胺、N-甲酰基半乳糖胺、N-乙酰基半乳糖胺、N-丙酰基半乳糖胺、N-正丁酰基半乳糖胺或N-异丁酰基半乳糖胺。In some embodiments, G can be galactose, galactosamine, N-formylgalactosamine, N-acetylgalactosamine, N-propionylgalactosamine, N-n-butyrylgalactosamine, or N -Isobutyrylgalactosamine.
在一些实施方案中,r可为3、4、5或6,例如3。 In some embodiments, r can be 3, 4, 5 or 6, such as 3.
在一些实施方案中,Q可为优选其中,R3、R4、R5和n的定义同前任一方案所述。In some embodiments, Q can be preferred Among them, the definitions of R 3 , R 4 , R 5 and n are the same as those described in the previous solution.
在一些实施方案中,可为其中,R3、R4、R5、p和q的定义同前任一方案所述。In some embodiments, can be Among them, the definitions of R 3 , R 4 , R 5 , p and q are the same as those described in the previous solution.
在一些实施方案中,可为 其中,R3、R4、R5、p和q的定义同前任一方案所述。In some embodiments, can be Among them, the definitions of R 3 , R 4 , R 5 , p and q are the same as those described in the previous solution.
在一些实施方案中,可为优选更优选p和q的定义同前任一方案所述。In some embodiments, can be preferred More preferred The definitions of p and q are the same as described in the previous scheme.
在一些实施方案中,可为 优选 更优选 p和q的定义同前任一方案所述。In some embodiments, can be preferred More preferred The definitions of p and q are the same as described in the previous scheme.
在一些实施方案中,可为其中,R3、R4、n、p和q的定义同前任一方案所述。In some embodiments, can be Among them, the definitions of R 3 , R 4 , n, p and q are the same as those described in the previous solution.
在一些实施方案中,可为其中,R3、R4、R5、n、p和q的定义同前任一方案所述。In some embodiments, can be Among them, the definitions of R 3 , R 4 , R 5 , n, p and q are the same as those described in the previous solution.
在一些实施方案中,可为n、p和q的定义同前任一方案所述。 In some embodiments, can be The definitions of n, p and q are the same as in the previous scheme.
在一些实施方案中,可为n、p和q的定义同前任一方案所述。In some embodiments, can be The definitions of n, p and q are the same as in the previous scheme.
一些实施方案中,所述靶向配体选自如式(II)所示结构,或其药学上可接受的盐:
In some embodiments, the targeting ligand is selected from the structure shown in formula (II), or a pharmaceutically acceptable salt thereof:
其中,L1为C1-C30烷基链、或包含被一个或多个氧、硫、氮原子或C=O间断的C1-C30烷基链;Wherein, L 1 is a C 1 -C 30 alkyl chain, or a C 1 -C 30 alkyl chain interrupted by one or more oxygen, sulfur, nitrogen atoms or C=O;
R1和R2独立地为化学键、NR6、C=O或-OC(=O)-;R 1 and R 2 are independently chemical bonds, NR 6 , C=O or -OC(=O)-;
Q为 Q is
为单键或双键,且当为单键时,R3独立地为CR7R8、NR6、O或S,当为双键时,R3独立地为CR9或N; is a single bond or a double bond, and when When it is a single bond, R 3 is independently CR 7 R 8 , NR 6 , O or S. When it is a double bond, R 3 is independently CR 9 or N;
R4独立地为CR9或N;R 4 is independently CR 9 or N;
环A为存在或不存在的环烷基、杂环基、芳基或杂芳基,且当环A存在时,R5独立地为CR9或N,当环A不存在时,R5独立地为CR7R8、NR6或O;Ring A is cycloalkyl, heterocyclyl, aryl or heteroaryl, which may or may not be present, and when Ring A is present, R 5 is independently CR 9 or N, when Ring A is absent, R 5 is independently The ground is CR 7 R 8 , NR 6 or O;
R6和R9独立地为氢、氘、烷基、烷氧基、环烷基、杂环基、芳基、杂芳基、SR'、S(=O)R'、S(=O)2R'、S(=O)2NR'(R”)、NR'(R”)、C(=O)R'、C(=O)OR'或C(=O)NR'(R”),所述烷基、烷氧基、环烷基、杂环基、芳基或杂芳基任选被一个或多个选自卤素(如氟、氯、溴)、羟基、氧代、硝基、氰基、C1-6烷基、C1-6烷氧基、C3-7环烷基、3-12元杂环基、5-12元芳基、5-12元杂芳基、SR'、S(=O)R'、S(=O)2R'、S(=O)2NR'(R”)、NR'(R”)、C(=O)R'、C(=O)OR'和C(=O)NR'(R”)中的基团所取代;R 6 and R 9 are independently hydrogen, deuterium, alkyl, alkoxy, cycloalkyl, heterocyclyl, aryl, heteroaryl, SR', S(=O)R', S(=O) 2 R', S(=O) 2 NR'(R”), NR'(R”), C(=O)R’, C(=O)OR’ or C(=O)NR’(R” ), the alkyl, alkoxy, cycloalkyl, heterocyclyl, aryl or heteroaryl group is optionally substituted by one or more halogens (such as fluorine, chlorine, bromine), hydroxyl, oxo, nitro group, cyano group, C 1-6 alkyl group, C 1-6 alkoxy group, C 3-7 cycloalkyl group, 3-12 membered heterocyclyl group, 5-12 membered aryl group, 5-12 membered heteroaryl group , SR', S(=O)R', S(=O) 2 R', S(=O) 2 NR'(R”), NR'(R”), C(=O)R', C Substituted by groups in (=O)OR' and C(=O)NR'(R”);
R7和R8独立地为氢、氘、烷基、烷氧基、环烷基、杂环基、芳基、杂芳基、SR'、S(=O)R'、S(=O)2R'、S(=O)2NR'(R”)、NR'(R”)、C(=O)R'、C(=O)OR'或C(=O)NR'(R”),所述烷基、烷氧基、环烷基、杂环基、芳基或杂芳基任选被一个或多个选自卤素(如氟、氯、溴)、羟基、氧代、硝基、氰基、C1-6烷基、C1-6烷氧基、C3-7环烷基、3-12元杂环基、5-12元芳基、5-12元杂芳基、SR'、S(=O)R'、S(=O)2R'、 S(=O)2NR'(R”)、NR'(R”)、C(=O)R'、C(=O)OR'和C(=O)NR'(R”)中的基团所取代;R 7 and R 8 are independently hydrogen, deuterium, alkyl, alkoxy, cycloalkyl, heterocyclyl, aryl, heteroaryl, SR', S(=O)R', S(=O) 2 R', S(=O) 2 NR'(R”), NR'(R”), C(=O)R’, C(=O)OR’ or C(=O)NR’(R” ), the alkyl, alkoxy, cycloalkyl, heterocyclyl, aryl or heteroaryl group is optionally substituted by one or more halogens (such as fluorine, chlorine, bromine), hydroxyl, oxo, nitro group, cyano group, C 1-6 alkyl group, C 1-6 alkoxy group, C 3-7 cycloalkyl group, 3-12 membered heterocyclyl group, 5-12 membered aryl group, 5-12 membered heteroaryl group ,SR',S(=O)R',S(=O) 2 R', S(=O) 2 NR'(R"), NR'(R"), C(=O)R', C(=O)OR' and C(=O)NR'(R") Replaced by regiment;
R'和R”独立地为氢、氘、羟基、烷基、烷氧基、环烷基、杂环基、芳基或杂芳基,所述烷基、烷氧基、环烷基、杂环基、芳基或杂芳基任选被一个或多个选自卤素(如氟、氯、溴)、羟基、氧代、硝基和氰基中的取代基所取代;R' and R" are independently hydrogen, deuterium, hydroxyl, alkyl, alkoxy, cycloalkyl, heterocyclyl, aryl or heteroaryl, said alkyl, alkoxy, cycloalkyl, hetero The cyclic group, aryl or heteroaryl group is optionally substituted by one or more substituents selected from halogen (such as fluorine, chlorine, bromine), hydroxyl, oxo, nitro and cyano;
m、n、p和q独立地为0、1、2、3或4;m, n, p and q are independently 0, 1, 2, 3 or 4;
B为 B is
Rb1、Rb2、Rb3、Rb4、Rb5、Rb6和Rb7独立地为-C(=O)-、-NHC(=O)-、-C(=O)O-、-C(=O)-(CH2)z8-O-或-NHC(=O)-(CH2)z9-O-;R b1 , R b2 , R b3 , R b4 , R b5 , R b6 and R b7 are independently -C(=O)-, -NHC(=O)-, -C(=O)O-, -C (=O)-(CH 2 ) z8 -O- or -NHC(=O)-(CH 2 ) z9 -O-;
z1、z2、z3、z4、z5、z6、z7、z8和z9独立地为0-10的整数;z1, z2, z3, z4, z5, z6, z7, z8 and z9 are independently integers from 0 to 10;
L2为C1-C30烷基链、或包含被一个或多个氧、硫、氮原子或C=O间断的C1-C30烷基链;L 2 is a C 1 -C 30 alkyl chain, or contains a C 1 -C 30 alkyl chain interrupted by one or more oxygen, sulfur, nitrogen atoms or C=O;
r为1-10的整数。r is an integer from 1 to 10.
在一些实施方案中,L1可为L3或L3-R10-R11-L3,其中,L3独立地为C1-C12烷基链、-(CH2)j1-C(=O)-(CH2)j2-或-(CH2)j3-(CH2CH2)1-4-(CH2)j4-,R10和R11独立地为化学键、-NR12-、-C(=O)-或-OC(=O)-,R12为氢或C1-C12烷基,j1、j2、j3和j4独立地为0-10的整数,优选0-2或4-10的整数,更优选0、1、2、6、7、8、9或10。In some embodiments, L 1 can be L 3 or L 3 -R 10 -R 11 -L 3 , where L 3 is independently a C 1 -C 12 alkyl chain, -(CH 2 ) j1 -C( =O)-(CH 2 ) j2 - or -(CH 2 ) j3 -(CH 2 CH 2 ) 1-4 -(CH 2 ) j4 -, R 10 and R 11 are independently chemical bonds, -NR 12 -, -C(=O)- or -OC(=O)-, R 12 is hydrogen or C 1 -C 12 alkyl, j1, j2, j3 and j4 are independently integers from 0 to 10, preferably 0 to 2 or An integer of 4-10, more preferably 0, 1, 2, 6, 7, 8, 9 or 10.
在一些实施方案中,L1可为-(CH2)j1-C(=O)-(CH2)j2-,j1和j2的定义同前任一方案所述。In some embodiments, L 1 can be -(CH 2 ) j1 -C(=O)-(CH 2 ) j2 -, j1 and j2 are as defined in the previous embodiment.
在一些实施方案中,L1可为j1和j2的定义同前任一方案所述,其中,a1端与B相连,b1端与R1相连。In some embodiments, L can be The definitions of j1 and j2 are the same as in the previous scheme, in which the a1 end is connected to B and the b1 end is connected to R 1 .
在一些实施方案中,L1可为 其中,a1端与B相连,b1端与R1相连。In some embodiments, L can be Among them, the a1 end is connected to B, and the b1 end is connected to R 1 .
在一些实施方案中,R1可为化学键且R2可为C=O。In some embodiments, R1 can be a chemical bond and R2 can be C=O.
在一些实施方案中,R1可为化学键且R2可为NR6,R6的定义同前任一方案所述。In some embodiments, R 1 can be a chemical bond and R 2 can be NR 6 , and R 6 is as defined in the previous embodiment.
在一些实施方案中,R1可为化学键且R2可为-OC(=O)-。In some embodiments, R 1 can be a chemical bond and R 2 can be -OC(=O)-.
在一些实施方案中,R1可为NR6且R2可为C=O,R6的定义同前任一方案所 述。In some embodiments, R 1 can be NR 6 and R 2 can be C=O, and R 6 is as defined in the previous embodiment. narrate.
在一些实施方案中,R1可为NR6且R2可为-OC(=O)-,R6的定义同前任一方案所述。In some embodiments, R 1 can be NR 6 and R 2 can be -OC(=O)-, and R 6 is as defined in the previous embodiment.
在一些实施方案中,R2可为NR6且R1可为C=O,R6的定义同前任一方案所述。In some embodiments, R 2 can be NR 6 and R 1 can be C=O, and R 6 is as defined in the previous embodiment.
在一些实施方案中,R2可为NR6且R1可为-OC(=O)-,R6的定义同前任一方案所述。In some embodiments, R 2 can be NR 6 and R 1 can be -OC(=O)-, and R 6 is as defined in the previous embodiment.
在一些实施方案中,R6可为氢或C1-6烷基。In some embodiments, R6 can be hydrogen or C1-6 alkyl.
在一些实施方案中,R6可为氢、甲基、乙基、丙基或异丙基。In some embodiments, R6 can be hydrogen, methyl, ethyl, propyl, or isopropyl.
在一些实施方案中,R6可为氢。In some embodiments, R6 can be hydrogen.
在一些实施方案中,R7和R8可为氢。In some embodiments, R7 and R8 can be hydrogen.
在一些实施方案中,R9可为氢。In some embodiments, R 9 can be hydrogen.
在一些实施方案中,环A存在时,环A可为C1-10芳基,优选苯基。In some embodiments, Ring A, when present, can be C 1-10 aryl, preferably phenyl.
在一些实施方案中,m可为0或1。In some embodiments, m can be 0 or 1.
在一些实施方案中,m可为3。In some embodiments, m can be 3.
在一些实施方案中,n可为0或1。In some embodiments, n can be 0 or 1.
在一些实施方案中,p和q独立地为0或1。In some embodiments, p and q are independently 0 or 1.
在一些实施方案中,p=1且q=1。In some embodiments, p=1 and q=1.
在一些实施方案中,p=1且q=0。In some embodiments, p=1 and q=0.
在一些实施方案中,p=0且q=1。In some embodiments, p=0 and q=1.
在一些实施方案中,p=0且q=0。In some embodiments, p=0 and q=0.
在一些实施方案中,z1、z2、z3、z4、z5、z6、z7、z8和z9可独立地为0-4的整数,优选0、1或2。In some embodiments, z1, z2, z3, z4, z5, z6, z7, z8, and z9 may independently be an integer from 0 to 4, preferably 0, 1, or 2.
在一些实施方案中,B可为Rb1、Rb2、Rb3和Rb4独立地为-C(=O)-或-NHC(=O)-,N原子与L1相连,z1、z2、z3和z4的定义同前任一方案所述。In some embodiments, B can be R b1 , R b2 , R b3 and R b4 are independently -C(=O)- or -NHC(=O)-, the N atom is connected to L 1 , and the definitions of z1, z2, z3 and z4 are the same as in the previous scheme. described.
在一些实施方案中,B可为Rb1、Rb2、Rb3和Rb4独立地为-C(=O)-或-NHC(=O)-,N原子与L1相连,Rb1、Rb3和Rb4相同,z1、z2、 z3和z4的定义同前任一方案所述。In some embodiments, B can be R b1 , R b2 , R b3 and R b4 are independently -C(=O)- or -NHC(=O)-, the N atom is connected to L 1 , R b1 , R b3 and R b4 are the same, z1 and z2 , The definitions of z3 and z4 are the same as described in the previous scheme.
在一些实施方案中,B可为 In some embodiments, B can be
在一些实施方案中,B可为 In some embodiments, B can be
在一些实施方案中,B可为Rb5、Rb6和Rb7独立地为-C(=O)-(CH2)z8-O-或-NHC(=O)-(CH2)z9-O-,N原子与L1相连,z5、z6、z7、z8和z9的定义同前任一方案所述。In some embodiments, B can be R b5 , R b6 and R b7 are independently -C(=O)-(CH 2 ) z8 -O- or -NHC(=O)-(CH 2 ) z9 -O-, and the N atom is connected to L 1 , The definitions of z5, z6, z7, z8 and z9 are the same as in the previous scheme.
在一些实施方案中,B可为Rb5、Rb6和Rb7独立地为-C(=O)-(CH2)z8-O-或-NHC(=O)-(CH2)z9-O-,N原子与L1相连,Rb5、Rb6和Rb7相同,z5、z6、z7、z8和z9的定义同前任一方案所述。In some embodiments, B can be R b5 , R b6 and R b7 are independently -C(=O)-(CH 2 ) z8 -O- or -NHC(=O)-(CH 2 ) z9 -O-, and the N atom is connected to L 1 , R b5 , R b6 and R b7 are the same, and the definitions of z5, z6, z7, z8 and z9 are the same as in the previous scheme.
在一些实施方案中,B可为 In some embodiments, B can be
在一些实施方案中,L2可为L4或L4-R13-R14-L4,其中,L4独立地为C1-C12烷基链或-(CH2)j5-(OCH2CH2)1-4-(CH2)j6-,R13和R14独立地为化学键、-NR15-、-C(=O)- 或-OC(=O)-,R15独立地为氢或C1-C12烷基,j5和j6独立地为0-10的整数,优选0-6的整数,更优选0、1、2、3或4。In some embodiments, L 2 can be L 4 or L 4 -R 13 -R 14 -L 4 , wherein L 4 is independently a C 1 -C 12 alkyl chain or -(CH 2 ) j 5 -(OCH 2 CH 2 ) 1-4 -(CH 2 ) j6 -, R 13 and R 14 are independently chemical bonds, -NR 15 -, -C(=O)- or -OC(=O)-, R 15 is independently hydrogen or C 1 -C 12 alkyl, j5 and j6 are independently an integer from 0 to 10, preferably an integer from 0 to 6, more preferably 0, 1, 2 , 3 or 4.
在一些实施方案中,L2可为-(CH2)j5-(OCH2CH2)1-4(CH2)j6-,j5和j6的定义同前任一方案所述。In some embodiments, L 2 can be -(CH 2 ) j5 -(OCH 2 CH 2 ) 1-4 (CH 2 ) j6 -, j5 and j6 are as defined in the previous embodiment.
在一些实施方案中,L2可为 优选 其中,O原子与G相连,C原子与B相连。In some embodiments, L2 can be preferred Among them, the O atom is connected to G, and the C atom is connected to B.
在一些实施方案中,L2可为C1-C12烷基链。In some embodiments, L2 can be a C1 - C12 alkyl chain.
在一些实施方案中,L2可为 In some embodiments, L2 can be
在一些实施方案中,L2可为优选更优选其中,a3端与G相连,b3端与B相连。In some embodiments, L2 can be preferred More preferred Among them, the a3 end is connected to G, and the b3 end is connected to B.
在一些实施方案中,L2可为其中,a3端与G相连,b3端与B相连。In some embodiments, L2 can be Among them, the a3 end is connected to G, and the b3 end is connected to B.
在一些实施方案中,r可为3、4、5或6,优选3。In some embodiments, r can be 3, 4, 5 or 6, with 3 being preferred.
在一些实施方案中,Q可为优选其中,R3、R4、R5和n的定义同前任一方案所述。In some embodiments, Q can be preferred Among them, the definitions of R 3 , R 4 , R 5 and n are the same as those described in the previous solution.
在一些实施方案中,可为其中,R3、R4、R5、p和q的定义同前任一方案所述。 In some embodiments, can be Among them, the definitions of R 3 , R 4 , R 5 , p and q are the same as those described in the previous solution.
在一些实施方案中,可为 其中,R3、R4、R5、p和q的定义同前任一方案所述。In some embodiments, can be Among them, the definitions of R 3 , R 4 , R 5 , p and q are the same as those described in the previous solution.
在一些实施方案中,可为优选更优选p和q的定义同前任一方案所述。In some embodiments, can be preferred More preferred The definitions of p and q are the same as described in the previous scheme.
在一些实施方案中,可为 优选 更优选 p和q的定义同前任一方案所述。In some embodiments, can be preferred More preferred The definitions of p and q are the same as described in the previous scheme.
在一些实施方案中,可为其中,R3、R4、n、p和q的定义同前任一方案所述。In some embodiments, can be Among them, the definitions of R 3 , R 4 , n, p and q are the same as those described in the previous solution.
在一些实施方案中,可为其中,R3、R4、R5、n、p和q的定义同前任一方案所述。In some embodiments, can be Among them, the definitions of R 3 , R 4 , R 5 , n, p and q are the same as those described in the previous solution.
在一些实施方案中,可为优选n、p和q的定义同前任一方案所述。In some embodiments, can be preferred The definitions of n, p and q are the same as in the previous scheme.
在一些实施方案中,可为n、p和q的定义同前任一方案所述。 In some embodiments, can be The definitions of n, p and q are the same as in the previous scheme.
在一些实施方案中,所述靶向配体为以下任一结构,或其药学上可接受的盐:



In some embodiments, the targeting ligand is any of the following structures, or a pharmaceutically acceptable salt thereof:



在一些实施方案中,所述靶向配体选自以下任一结构,,或其药学上可接受的盐:














In some embodiments, the targeting ligand is selected from any of the following structures, or a pharmaceutically acceptable salt thereof:














在一些实施方案中,可以N-三氟乙酰基半乳糖胺、N-丙酰基半乳糖胺、N-正丁酰基半乳糖胺或N-异丁酰基半乳糖胺替换以上配体中的N-乙酰基-半乳糖胺部分。In some embodiments, N- in the above ligands can be replaced by N-trifluoroacetylgalactosamine, N-propionylgalactosamine, N-n-butyrylgalactosamine or N-isobutyrylgalactosamine. Acetyl-galactosamine moiety.
在一些实施方案中,以N-三氟乙酰基半乳糖胺三乙酸酯、N-丙酰基半乳糖胺三乙酸酯、N-正丁酰基半乳糖胺三乙酸酯或N-异丁酰基半乳糖胺三乙酸酯替换上述靶向配体中的N-乙酰基-半乳糖胺三乙酸酯部分。In some embodiments, N-trifluoroacetylgalactosamine triacetate, N-propionylgalactosamine triacetate, N-n-butyrylgalactosamine triacetate, or N-isobutyl Acylgalactosamine triacetate replaces the N-acetyl-galactosamine triacetate moiety in the above targeting ligand.
在一些具体的实施方案中,所述正义链包含SEQ ID NO:6或SEQ ID NO:7所示的核苷酸序列。In some specific embodiments, the sense strand comprises the nucleotide sequence shown in SEQ ID NO:6 or SEQ ID NO:7.
在一些具体的实施方案中,所述反义链包含SEQ ID NO:5所示的核苷酸序列。 In some specific embodiments, the antisense strand comprises the nucleotide sequence set forth in SEQ ID NO:5.
在一些具体的实施方案中,所述正义链选自SEQ ID NO:6或SEQ ID NO:7所示的核苷酸序列;In some specific embodiments, the sense strand is selected from the nucleotide sequence shown in SEQ ID NO: 6 or SEQ ID NO: 7;
在一些具体的实施方案中,所述反义链选自SEQ ID NO:5所示的核苷酸序列。In some specific embodiments, the antisense strand is selected from the nucleotide sequence shown in SEQ ID NO:5.
在一些具体的实施方案中,本公开所述的寡核苷酸的正义链包含SEQ ID NO:6,且反义链包含SEQ ID NO:5。In some specific embodiments, the sense strand of an oligonucleotide of the present disclosure includes SEQ ID NO: 6, and the antisense strand includes SEQ ID NO: 5.
在一些具体的实施方案中,本公开所述的寡核苷酸的正义链包含SEQ ID NO:7,且反义链包含SEQ ID NO:5。In some specific embodiments, the sense strand of an oligonucleotide of the present disclosure includes SEQ ID NO: 7, and the antisense strand includes SEQ ID NO: 5.
在一些具体的实施方案中,本公开所述的寡核苷酸的正义链选自SEQ ID NO:6,且反义链选自SEQ ID NO:5。In some specific embodiments, the sense strand of an oligonucleotide of the present disclosure is selected from SEQ ID NO: 6, and the antisense strand is selected from SEQ ID NO: 5.
在一些具体的实施方案中,本公开所述的寡核苷酸正义链选自SEQ ID NO:7,且反义链选自SEQ ID NO:5。In some specific embodiments, the sense strand of the oligonucleotide of the present disclosure is selected from SEQ ID NO: 7, and the antisense strand is selected from SEQ ID NO: 5.
在一些具体的实施方案中,本公开所述的寡核苷酸选自以下任一项:In some specific embodiments, the oligonucleotides described in the present disclosure are selected from any of the following:
有义链包含SEQ ID NO:6所示的核苷酸序列,并且反义链包含SEQ ID NO:5所示的核苷酸序列;The sense strand includes the nucleotide sequence shown in SEQ ID NO:6, and the antisense strand includes the nucleotide sequence shown in SEQ ID NO:5;
有义链包含SEQ ID NO:7所示的核苷酸序列,并且反义链包含SEQ ID NO:5所示的核苷酸序列。The sense strand includes the nucleotide sequence shown in SEQ ID NO:7, and the antisense strand includes the nucleotide sequence shown in SEQ ID NO:5.
在一些具体的实施方案中,本公开所述的寡核苷酸选自以下任一项:In some specific embodiments, the oligonucleotides described in the present disclosure are selected from any of the following:
有义链是SEQ ID NO:6所示的核苷酸序列,并且反义链是SEQ ID NO:5所示的核苷酸序列;The sense strand is the nucleotide sequence shown in SEQ ID NO:6, and the antisense strand is the nucleotide sequence shown in SEQ ID NO:5;
有义链是SEQ ID NO:7所示的核苷酸序列,并且反义链是SEQ ID NO:5所示的核苷酸序列。The sense strand is the nucleotide sequence shown in SEQ ID NO:7, and the antisense strand is the nucleotide sequence shown in SEQ ID NO:5.
本公开中,按照5’-3’方向,In this disclosure, according to the 5’-3’ direction,
SEQ ID NO:6是GmsCmsUmCmCmUmUfAfUfUmGmUmUmAmUmAmCmGmAm-NAG0052’;SEQ ID NO:6 is GmsCmsUmCmCmUmUfAfUfUmGmUmUmAmUmAmCmGmAm-NAG0052’;
SEQ ID NO:7是GmsCmsUmCmCmUmUfAfUfUmGmUmUmAmUmAmCmGmsAm-NAG0052’;SEQ ID NO:7 is GmsCmsUmCmCmUmUfAfUfUmGmUmUmAmUmAmCmGmsAm-NAG0052’;
SEQ ID NO:5是NA0127CfsGmUfAmUfAmAmCmAfAmUfAmAfGmGfAmGfCmsUmsGm;SEQ ID NO:5 is NA0127CfsGmUfAmUfAmAmCmAfAmUfAmAfGmGfAmGfCmsUmsGm;
其中,Af=腺嘌呤2'-F核糖核苷(adenine 2'-F ribonucleoside);Cf=胞嘧啶2'-F核糖核苷(cytosine 2'-F ribonucleoside);Uf=尿嘧啶2'-F核糖核苷(uracil 2'-F ribonucleoside);Gf=鸟嘌呤2'-F核糖核苷(guanine 2'-F ribonucleoside);Am=腺嘌呤2'-OMe核糖核苷(adenine 2'-OMe ribonucleoside);Cm=胞嘧啶2'-OMe核糖核苷(cytosine 2'-OMe ribonucleoside);Gm=鸟嘌呤2'-OMe核糖核苷(guanine2'-OMe ribonucleoside);Um=尿嘧啶2'-OMe核糖核苷(uracil 2'-OMe ribonucleoside); Among them, Af = adenine 2'-F ribonucleoside; Cf = cytosine 2'-F ribonucleoside; Uf = uracil 2'-F Ribonucleoside (uracil 2'-F ribonucleoside); Gf = guanine 2'-F ribonucleoside (guanine 2'-F ribonucleoside); Am = adenine 2'-OMe ribonucleoside (adenine 2'-OMe ribonucleoside ); Cm=cytosine 2'-OMe ribonucleoside; Gm=guanine 2'-OMe ribonucleoside; Um=uracil 2'-OMe ribose Nucleoside (uracil 2'-OMe ribonucleoside);
s表示与该字母s左右相邻的两个核苷酸之间为硫代磷酸二酯基连接;s means that the two nucleotides adjacent to the left and right of the letter s are connected by phosphorothioate diester groups;
NA0127表示 NA0127 means
NAG0052’表示
NAG0052' means
在一些实施方案中,所述寡核苷酸为如下结构所示的阴离子形式或其药学上可接受的盐:
In some embodiments, the oligonucleotide is an anionic form represented by the following structure or a pharmaceutically acceptable salt thereof:
其中,in,
Af=腺嘌呤2'-F核糖核苷(adenine 2'-F ribonucleoside);Af=adenine 2'-F ribonucleoside (adenine 2'-F ribonucleoside);
Cf=胞嘧啶2'-F核糖核苷(cytosine 2'-F ribonucleoside);Cf=cytosine 2'-F ribonucleoside;
Uf=尿嘧啶2'-F核糖核苷(uracil 2'-F ribonucleoside);Uf=uracil 2'-F ribonucleoside (uracil 2'-F ribonucleoside);
Gf=鸟嘌呤2'-F核糖核苷(guanine 2'-F ribonucleoside);Gf=guanine 2'-F ribonucleoside (guanine 2'-F ribonucleoside);
Am=腺嘌呤2'-OMe核糖核苷(adenine 2'-OMe ribonucleoside);Am = adenine 2'-OMe ribonucleoside (adenine 2'-OMe ribonucleoside);
Cm=胞嘧啶2'-OMe核糖核苷(cytosine 2'-OMe ribonucleoside);Cm=cytosine 2'-OMe ribonucleoside (cytosine 2'-OMe ribonucleoside);
Gm=鸟嘌呤2'-OMe核糖核苷(guanine 2'-OMe ribonucleoside);Gm=guanine 2'-OMe ribonucleoside (guanine 2'-OMe ribonucleoside);
Um=尿嘧啶2'-OMe核糖核苷(uracil 2'-OMe ribonucleoside); Um=uracil 2'-OMe ribonucleoside (uracil 2'-OMe ribonucleoside);
表示硫代磷酸酯基,表示磷酸二酯基; Represents phosphorothioate group, Represents phosphodiester group;
NAG0052’表示
NAG0052' means
NA0127’表示 NA0127' means
药学上可接受的盐可为本领域常规的盐,包括但不限于:钠盐、钾盐、铵盐、胺盐等。Pharmaceutically acceptable salts can be conventional salts in the art, including but not limited to: sodium salt, potassium salt, ammonium salt, amine salt, etc.
在一些实施方案中,本公开所述寡核苷酸为如下结构或其药学上可接受的盐:
In some embodiments, the oligonucleotides described in the present disclosure are the following structures or pharmaceutically acceptable salts thereof:
其中,in,
Af=腺嘌呤2'-F核糖核苷(adenine 2'-F ribonucleoside);Af=adenine 2'-F ribonucleoside (adenine 2'-F ribonucleoside);
Cf=胞嘧啶2'-F核糖核苷(cytosine 2'-F ribonucleoside);Cf=cytosine 2'-F ribonucleoside;
Uf=尿嘧啶2'-F核糖核苷(uracil 2'-F ribonucleoside);Uf=uracil 2'-F ribonucleoside (uracil 2'-F ribonucleoside);
Gf=鸟嘌呤2'-F核糖核苷(guanine 2'-F ribonucleoside);Gf=guanine 2'-F ribonucleoside (guanine 2'-F ribonucleoside);
Am=腺嘌呤2'-OMe核糖核苷(adenine 2'-OMe ribonucleoside);Am = adenine 2'-OMe ribonucleoside (adenine 2'-OMe ribonucleoside);
Cm=胞嘧啶2'-OMe核糖核苷(cytosine 2'-OMe ribonucleoside);Cm=cytosine 2'-OMe ribonucleoside (cytosine 2'-OMe ribonucleoside);
Gm=鸟嘌呤2'-OMe核糖核苷(guanine 2'-OMe ribonucleoside);Gm=guanine 2'-OMe ribonucleoside (guanine 2'-OMe ribonucleoside);
Um=尿嘧啶2'-OMe核糖核苷(uracil 2'-OMe ribonucleoside); Um=uracil 2'-OMe ribonucleoside (uracil 2'-OMe ribonucleoside);
表示硫代磷酸酯基,表示磷酸二酯基; Represents phosphorothioate group, Represents phosphodiester group;
NAG0052’表示:
NAG0052' means:
NA0127表示 NA0127 means
药学上可接受的盐可为本领域常规的盐,包括但不限于:钠盐、钾盐、铵盐、胺盐等。Pharmaceutically acceptable salts can be conventional salts in the art, including but not limited to: sodium salt, potassium salt, ammonium salt, amine salt, etc.
在一些实施方案中,所述寡核苷酸选自TJR100747、TJR100848。In some embodiments, the oligonucleotide is selected from TJR100747, TJR100848.
在一些实施方案中,所述寡核苷酸选自如下结构:
In some embodiments, the oligonucleotide is selected from the following structures:
在一些实施方案中,所述寡核苷酸选自如下结构:
In some embodiments, the oligonucleotide is selected from the following structures:
其中,in,
Af=腺嘌呤2'-F核糖核苷(adenine 2'-F ribonucleoside);Af=adenine 2'-F ribonucleoside (adenine 2'-F ribonucleoside);
Cf=胞嘧啶2'-F核糖核苷(cytosine 2'-F ribonucleoside);Cf=cytosine 2'-F ribonucleoside;
Uf=尿嘧啶2'-F核糖核苷(uracil 2'-F ribonucleoside);Uf=uracil 2'-F ribonucleoside (uracil 2'-F ribonucleoside);
Gf=鸟嘌呤2'-F核糖核苷(guanine 2'-F ribonucleoside);Gf=guanine 2'-F ribonucleoside (guanine 2'-F ribonucleoside);
Am=腺嘌呤2'-OMe核糖核苷(adenine 2'-OMe ribonucleoside);Am = adenine 2'-OMe ribonucleoside (adenine 2'-OMe ribonucleoside);
Cm=胞嘧啶2'-OMe核糖核苷(cytosine 2'-OMe ribonucleoside); Cm=cytosine 2'-OMe ribonucleoside (cytosine 2'-OMe ribonucleoside);
Gm=鸟嘌呤2'-OMe核糖核苷(guanine 2'-OMe ribonucleoside);Gm=guanine 2'-OMe ribonucleoside (guanine 2'-OMe ribonucleoside);
Um=尿嘧啶2'-OMe核糖核苷(uracil 2'-OMe ribonucleoside);Um=uracil 2'-OMe ribonucleoside (uracil 2'-OMe ribonucleoside);
表示硫代磷酸酯基,表示磷酸二酯基; Represents phosphorothioate group, Represents phosphodiester group;
NAG0052’表示:
NAG0052' means:
NA0127’表示 NA0127' means
本公开还提供了一种式(IV)所示的化合物或其互变异构体,
The present disclosure also provides a compound represented by formula (IV) or a tautomer thereof,
其中,RA8、RA9各自独立地选自-CH3、-CH2CH3、-CH2CH2CN、-CH2OPiv(即-CH2OCOC(CH3)3)、CH2OCH2CH2Si(CH3)3或保护基;R A10选自含磷活性反应基团;RA1、RA2各自独立地选自氢或氘;M4选自O或S;B选自碱基、氢、氘;RA3选自氢、氘、羟基、卤素(如氟、氯、溴)、烷基(例如C1、C2、C3、C4、C5、C6烷基,包括但不限于甲基、乙基、异丙基)、烷氧基(例如C1烷氧基、C2烷氧基、C3烷氧基、C4烷氧基、C5烷氧基、C6烷氧基,包括但不限于甲氧基、乙氧基、丙氧基、异丙氧基),所述羟基、烷基、烷氧基各自任选被一个或多个氘所取代;B选自碱基、氢、氘;条件是,式(IV)中包含至少一个氘。Among them, RA8 and RA9 are each independently selected from -CH 3 , -CH 2 CH 3 , -CH 2 CH 2 CN, -CH 2 OPiv (i.e. -CH 2 OCOC(CH 3 ) 3 ), CH 2 OCH 2 CH 2 Si(CH 3 ) 3 or protecting group; R A10 is selected from phosphorus-containing reactive groups; R A1 and R A2 are each independently selected from hydrogen or deuterium; M 4 is selected from O or S; B is selected from bases , hydrogen, deuterium; R A3 is selected from hydrogen, deuterium, hydroxyl, halogen (such as fluorine, chlorine, bromine), alkyl (such as C1, C2, C3, C4, C5, C6 alkyl, including but not limited to methyl, Ethyl, isopropyl), alkoxy (such as C1 alkoxy, C2 alkoxy, C3 alkoxy, C4 alkoxy, C5 alkoxy, C6 alkoxy, including but not limited to methoxy , ethoxy, propoxy, isopropoxy), each of the hydroxyl, alkyl, and alkoxy groups is optionally substituted by one or more deuteriums; B is selected from base, hydrogen, and deuterium; the condition is, Formula (IV) contains at least one deuterium.
在一些实施方案中,式(IV)选自式(IV-1),
In some embodiments, Formula (IV) is selected from Formula (IV-1),
其中,RA5、RA6、RA7各自独立地选自氢或氘;RA1、RA2、RA8、RA9、R A10、B如式(IV)所定义,条件是,式(IV-1)中包含至少一个氘。Among them, RA5 , RA6 and RA7 are each independently selected from hydrogen or deuterium; RA1 , RA2 , RA8 , RA9 , RA10 and B are as defined by formula (IV), with the condition that formula (IV- 1) contains at least one deuterium.
在一些实施方案中,式(IV)所示的化合物选自:

In some embodiments, the compound of formula (IV) is selected from:

B选自碱基、氢。B is selected from base and hydrogen.
本公开还提供了一种制备本公开所述寡核苷酸的方法,其包括以下步骤:The present disclosure also provides a method for preparing the oligonucleotide of the present disclosure, which includes the following steps:
(1)合成本公开所述的式(IV)所示的化合物或其互变异构体;(1) Synthesize the compound represented by formula (IV) or its tautomer described in this disclosure;
(2)利用步骤(1)的式(IV)所示的化合物或其互变异构体合成本公开所述的寡核苷酸。(2) Use the compound represented by formula (IV) in step (1) or its tautomer to synthesize the oligonucleotide described in the present disclosure.
本公开还提供了一种制备本公开所述的式(IV)所示的化合物或其互变异构体的方法,包括:
The present disclosure also provides a method for preparing the compound represented by formula (IV) or its tautomer according to the present disclosure, including:
将化合物(IV-2)溶于二氯甲烷,在室温下加入2-氰乙基N,N-二异丙基氯代 亚磷酰胺和二异丙基乙胺,搅拌至反应完全,得到产品(IV-1),Dissolve compound (IV-2) in dichloromethane and add 2-cyanoethyl N,N-diisopropyl chloride at room temperature. Phosphoramidite and diisopropylethylamine are stirred until the reaction is complete to obtain product (IV-1),
其中,RA5、RA6、RA7各自独立地选自氢或氘;RA1、RA2、RA8、RA9、RA10、B如式(IV)所定义,条件是,式(IV-1)、(IV-2)中包含至少一个氘。Among them, RA5 , RA6 and RA7 are each independently selected from hydrogen or deuterium; RA1 , RA2 , RA8 , RA9 , RA10 and B are as defined by formula (IV), with the condition that formula (IV- 1), (IV-2) contains at least one deuterium.
另一方面,本公开还提供了一种寡核苷酸,其包含至少一个式(V)所示的化学修饰或其互变异构体修饰,所述式(V)所示的化学修饰选自:
On the other hand, the present disclosure also provides an oligonucleotide comprising at least one chemical modification represented by formula (V) or a tautomer modification thereof, wherein the chemical modification represented by formula (V) is selected from since:
其中,M3选自-S-、-NH-、-NRA11-,RA11选自C1-C6亚烷基,RA1、RA2、M1、M2、B、RA3、RA4如式(I)所定义,条件是,式(V)中包含至少一个氘。Among them, M 3 is selected from -S-, -NH-, -NR A11 -, R A11 is selected from C 1 -C 6 alkylene, R A1 , R A2 , M 1 , M 2 , B, R A3 , R A4 is as defined by formula (I), with the proviso that formula (V) contains at least one deuterium.
在本公开的一些实施方案中,所述的式(I)、(I-1)、(IV)或(IV-1)所示的化合物,其中所述的氘原子的氘的丰度比氘的天然丰度大至少2000倍,所述的氘的天然丰度为0.015%。In some embodiments of the present disclosure, the compound represented by formula (I), (I-1), (IV) or (IV-1), wherein the deuterium atom has an abundance greater than that of deuterium The natural abundance of deuterium is at least 2000 times greater, and the natural abundance of deuterium is 0.015%.
在本公开的一些实施方案中,所述的式(I)、(I-1)、(IV)或(IV-1)所示的化合物或其可药用的盐,其中所述的氘原子的氘的丰度比氘的天然丰度大至少3000倍,所述的氘的天然丰度为0.015%。In some embodiments of the present disclosure, the compound represented by formula (I), (I-1), (IV) or (IV-1) or a pharmaceutically acceptable salt thereof, wherein the deuterium atom The abundance of deuterium is at least 3000 times greater than the natural abundance of deuterium, which is 0.015%.
在本公开的一些实施方案中,所述的式(I)、(I-1)、(IV)或(IV-1)所示的化合物或其可药用的盐,其中所述的氘原子的氘的丰度比氘的天然丰度大至少3340倍,所述的氘的天然丰度为0.015%。In some embodiments of the present disclosure, the compound represented by formula (I), (I-1), (IV) or (IV-1) or a pharmaceutically acceptable salt thereof, wherein the deuterium atom The abundance of deuterium is at least 3340 times greater than the natural abundance of deuterium, which is 0.015%.
在本公开的一些实施方案中,所述的式((I)、(I-1)、(IV)或(IV-1)所示的化合物或其可药用的盐,其中所述的氘原子的氘的丰度比氘的天然丰度大至少3500倍,所述的氘的天然丰度为0.015%。In some embodiments of the present disclosure, the compound represented by formula ((I), (I-1), (IV) or (IV-1) or a pharmaceutically acceptable salt thereof, wherein the deuterium The atomic abundance of deuterium is at least 3500 times greater than the natural abundance of deuterium, which is 0.015%.
在本公开的一些实施方案中,所述的式(I)、(I-1)、(IV)或(IV-1)所示的化合物或其可药用的盐,其中所述的氘原子的氘的丰度比氘的天然丰度大至少4000倍,所述的氘的天然丰度为0.015%。In some embodiments of the present disclosure, the compound represented by formula (I), (I-1), (IV) or (IV-1) or a pharmaceutically acceptable salt thereof, wherein the deuterium atom The abundance of deuterium is at least 4000 times greater than the natural abundance of deuterium, which is 0.015%.
在本公开的一些实施方案中,所述的式(I)、(I-1)、(IV)或(IV-1)所示的化合物或其可药用的盐,其中所述的氘原子的氘的丰度比氘的天然丰度大至少4500倍,所述的氘的天然丰度为0.015%。In some embodiments of the present disclosure, the compound represented by formula (I), (I-1), (IV) or (IV-1) or a pharmaceutically acceptable salt thereof, wherein the deuterium atom The abundance of deuterium is at least 4500 times greater than the natural abundance of deuterium, which is 0.015%.
在本公开的一些实施方案中,所述的式(I)、(I-1)、(IV)或(IV-1)所示的化合物或其可药用的盐,其中所述的氘原子的氘的丰度比氘的天然丰度大至少5000倍,所述的氘的天然丰度为0.015%。 In some embodiments of the present disclosure, the compound represented by formula (I), (I-1), (IV) or (IV-1) or a pharmaceutically acceptable salt thereof, wherein the deuterium atom The abundance of deuterium is at least 5,000 times greater than the natural abundance of deuterium, which is 0.015%.
在本公开的一些实施方案中,所述的式(I)、(I-1)、(IV)或(IV-1)所示的化合物或其可药用的盐,其中所述的氘原子的氘的丰度比氘的天然丰度大至少5500倍,所述的氘的天然丰度为0.015%。In some embodiments of the present disclosure, the compound represented by formula (I), (I-1), (IV) or (IV-1) or a pharmaceutically acceptable salt thereof, wherein the deuterium atom The abundance of deuterium is at least 5500 times greater than the natural abundance of deuterium, which is 0.015%.
在本公开的一些实施方案中,所述的式(I)、(I-1)、(IV)或(IV-1)所示的化合物或其可药用的盐,其中所述的氘原子的氘的丰度比氘的天然丰度大至少6000倍,所述的氘的天然丰度为0.015%。In some embodiments of the present disclosure, the compound represented by formula (I), (I-1), (IV) or (IV-1) or a pharmaceutically acceptable salt thereof, wherein the deuterium atom The abundance of deuterium is at least 6000 times greater than the natural abundance of deuterium, which is 0.015%.
在本公开的一些实施方案中,所述的式(I)、(I-1)、(IV)或(IV-1)所示的化合物或其可药用的盐,其中所述的氘原子的氘的丰度比氘的天然丰度大至少6333.3倍,所述的氘的天然丰度为0.015%。In some embodiments of the present disclosure, the compound represented by formula (I), (I-1), (IV) or (IV-1) or a pharmaceutically acceptable salt thereof, wherein the deuterium atom The abundance of deuterium is at least 6333.3 times greater than the natural abundance of deuterium, which is 0.015%.
在本公开的一些实施方案中,所述的式(I)、(I-1)、(IV)或(IV-1)所示的化合物或其可药用的盐,其中所述的氘原子的氘的丰度比氘的天然丰度大至少6466.7倍,所述的氘的天然丰度为0.015%。In some embodiments of the present disclosure, the compound represented by formula (I), (I-1), (IV) or (IV-1) or a pharmaceutically acceptable salt thereof, wherein the deuterium atom The abundance of deuterium is at least 6466.7 times greater than the natural abundance of deuterium, which is 0.015%.
在本公开的一些实施方案中,所述的式(I)、(I-1)、(IV)或(IV-1)所示的化合物或其可药用的盐,其中所述的氘原子的氘的丰度比氘的天然丰度大至少6600倍,所述的氘的天然丰度为0.015%。In some embodiments of the present disclosure, the compound represented by formula (I), (I-1), (IV) or (IV-1) or a pharmaceutically acceptable salt thereof, wherein the deuterium atom The abundance of deuterium is at least 6600 times greater than the natural abundance of deuterium, which is 0.015%.
在本公开的一些实施方案中,所述的式(I)、(I-1)、(IV)或(IV-1)所示的化合物或其可药用的盐,其中所述的氘原子的氘的丰度比氘的天然丰度大至少6633.3倍,所述的氘的天然丰度为0.015%。In some embodiments of the present disclosure, the compound represented by formula (I), (I-1), (IV) or (IV-1) or a pharmaceutically acceptable salt thereof, wherein the deuterium atom The abundance of deuterium is at least 6633.3 times greater than the natural abundance of deuterium, which is 0.015%.
另一方面,本公开提供了一种药物组合物,其包含本公开所述的寡核苷酸。In another aspect, the present disclosure provides a pharmaceutical composition comprising an oligonucleotide of the present disclosure.
在一些实施方案中,所述的药物组合物还包含一种或多种药学上可接受的赋形剂。In some embodiments, the pharmaceutical composition further includes one or more pharmaceutically acceptable excipients.
在一些实施方案中,所述的药学上可接受的赋形剂可为例如载剂、运载体、稀释剂、和/或递送聚合物。In some embodiments, the pharmaceutically acceptable excipients may be, for example, carriers, carriers, diluents, and/or delivery polymers.
在一些实施方案中,所述的寡核苷酸可为治疗有效量。In some embodiments, the oligonucleotide can be in a therapeutically effective amount.
在一些实施方案中,所述的寡核苷酸的单位剂量可为0.001mg-1000mg。In some embodiments, the unit dosage of the oligonucleotide may be 0.001 mg-1000 mg.
在一些实施方案中,基于药物组合物的总重量,所述寡核苷酸的含量可为0.01-99.99%,又可为0.1-99.9%,还可为0.5%-99.5%,进一步可为1%-99%,更进一步可为2%-98%。In some embodiments, based on the total weight of the pharmaceutical composition, the content of the oligonucleotide may be 0.01-99.99%, or 0.1-99.9%, or 0.5%-99.5%, or further 1 %-99%, further can be 2%-98%.
在一些实施方案中,基于药物组合物的总重量,所述药学上可接受的赋形剂的含量可为0.01-99.99%,又可为0.1-99.9%,还可为0.5%-99.5%,进一步可为1%-99%,更进一步可为2%-98%。In some embodiments, the content of the pharmaceutically acceptable excipients may be 0.01-99.99%, 0.1-99.9%, or 0.5%-99.5%, based on the total weight of the pharmaceutical composition. It may further be 1%-99%, and further it may be 2%-98%.
在一些实施方案中,所述的寡核苷酸或药物组合物的有效量或有效剂量为约0.001mg/kg体重至约200mg/kg体重、约0.01mg/kg体重至约100mg/kg体重或约0.5mg/kg体重至约50mg/kg体重。In some embodiments, the effective amount or dosage of the oligonucleotide or pharmaceutical composition is about 0.001 mg/kg body weight to about 200 mg/kg body weight, about 0.01 mg/kg body weight to about 100 mg/kg body weight, or About 0.5 mg/kg body weight to about 50 mg/kg body weight.
各种递药系统是已知的并且可以用于本公开的寡核苷酸或药物组合物,例如 封装在脂质体中、微粒、微囊、能够表达该化合物的重组细胞、受体介导的细胞内吞作用、构建核酸作为逆转录病毒或其他载体的一部分。Various drug delivery systems are known and can be used in the oligonucleotides or pharmaceutical compositions of the present disclosure, e.g. Encapsulation in liposomes, microparticles, microvesicles, recombinant cells capable of expressing the compound, receptor-mediated endocytosis, constructed nucleic acid as part of a retroviral or other vector.
在一些实施方案中,本公开的寡核苷酸或药物组合物的给药方式是常规的,可通过局部给药(例如,直接注射或植入)或全身给药,也可通过口服、直肠或胃肠外途径进行给药,所述肠胃外途径包括但不限于皮下注射、静脉注射、肌肉注射、腹腔注射、透皮给药、吸入给药(如气溶胶)、粘膜给药(如舌下、鼻内给药)、颅内给药等。In some embodiments, the oligonucleotides or pharmaceutical compositions of the present disclosure are administered in a conventional manner, either locally (e.g., direct injection or implantation) or systemically, orally or rectally. Or administration by parenteral route, which includes but is not limited to subcutaneous injection, intravenous injection, intramuscular injection, intraperitoneal injection, transdermal administration, inhalation administration (such as aerosol), mucosal administration (such as tongue intranasal administration), intracranial administration, etc.
在一些实施方案中,本公开提供的寡核苷酸或药物组合物可以通过注射给予,例如,静脉内、肌内、皮内、皮下、十二指肠内或腹膜内注射。In some embodiments, the oligonucleotides or pharmaceutical compositions provided by the present disclosure can be administered by injection, for example, intravenously, intramuscularly, intradermally, subcutaneously, intraduodenally, or intraperitoneally.
在一些实施方案中,本公开提供的寡核苷酸或药物组合物可被包装在试剂盒中。In some embodiments, oligonucleotides or pharmaceutical compositions provided by the present disclosure can be packaged in kits.
另一方面,本公开提供了一种上述的寡核苷酸或上述的药物组合物在制备药物中的应用。On the other hand, the present disclosure provides a use of the above-mentioned oligonucleotide or the above-mentioned pharmaceutical composition in the preparation of medicines.
在一些实施方案中,所述的药物可用于预防和/或治疗与脂蛋白(a)和/或载脂蛋白(a)水平升高相关的疾病。在一些实施方案中,所述与脂蛋白(a)和/或载脂蛋白(a)水平升高相关的疾病选自心血管疾病。在一些实施方案中,所述心血管疾病选自缺血性中风、动脉粥样硬化、血栓形成、冠心病、下肢动脉病变或主动脉瓣狭窄、心肌梗塞、冠状动脉狭窄、颈动脉狭窄、股动脉狭窄、心脏衰竭。在一些实施方案中,所述的药物用于抑制LPA的表达。In some embodiments, the medicaments may be used to prevent and/or treat diseases associated with elevated levels of lipoprotein(a) and/or apolipoprotein(a). In some embodiments, the disease associated with elevated levels of lipoprotein(a) and/or apolipoprotein(a) is selected from cardiovascular disease. In some embodiments, the cardiovascular disease is selected from the group consisting of ischemic stroke, atherosclerosis, thrombosis, coronary heart disease, lower extremity arterial disease or aortic stenosis, myocardial infarction, coronary artery stenosis, carotid artery stenosis, femoral stenosis, Arterial narrowing, heart failure. In some embodiments, the drug is used to inhibit the expression of LPA.
在一些实施方案中,所述的药物可用于预防和/或治疗心血管疾病。在一些实施方案中,所述心血管疾病选自缺血性中风、动脉粥样硬化、血栓形成、冠心病、下肢动脉病变或主动脉瓣狭窄、心肌梗塞、冠状动脉狭窄、颈动脉狭窄、股动脉狭窄、心脏衰竭。In some embodiments, the medicaments may be used to prevent and/or treat cardiovascular disease. In some embodiments, the cardiovascular disease is selected from the group consisting of ischemic stroke, atherosclerosis, thrombosis, coronary heart disease, lower extremity arterial disease or aortic stenosis, myocardial infarction, coronary artery stenosis, carotid artery stenosis, femoral stenosis, Arterial narrowing, heart failure.
在一些实施方案中,所述的药物可用于预防和/或治疗血栓栓塞性并发症。在一些实施方案中,所述的血栓栓塞性并发症可为深静脉血栓形成、肺栓塞、心肌梗塞或中风。In some embodiments, the medicaments may be used to prevent and/or treat thromboembolic complications. In some embodiments, the thromboembolic complication may be deep vein thrombosis, pulmonary embolism, myocardial infarction, or stroke.
在一些实施方案中,所述的药物可用于预防和/或治疗与乙型肝炎病毒相关的疾病。在一些实施方案中,所述与乙型肝炎病毒相关的疾病是慢性肝炎,所述受试者是HBeAg阳性或HBeAg阴性。在一些实施方案中,所述与乙型肝炎病毒相关的疾病是乙型肝炎;在一些实施方案中,所述乙型肝炎选自慢性乙型肝炎或急性乙型肝炎。In some embodiments, the medicaments may be used to prevent and/or treat diseases associated with hepatitis B virus. In some embodiments, the disease associated with hepatitis B virus is chronic hepatitis and the subject is HBeAg positive or HBeAg negative. In some embodiments, the disease associated with the hepatitis B virus is hepatitis B; in some embodiments, the hepatitis B is selected from chronic hepatitis B or acute hepatitis B.
在一些实施方案中,所述的药物可用于预防和/或治疗与APOC3基因表达相关的疾病。在一些实施方案中,所述疾病选自高甘油三酯血症、肥胖症、高脂血症、脂质和/或胆固醇代谢异常、动脉粥样硬化、心血管疾病、冠状动脉疾病、高甘油三酯血症诱导的胰腺炎、代谢综合征、II型糖尿病、家族性乳糜微粒血症综合 征或家族性部分脂质营养不良。In some embodiments, the medicaments can be used to prevent and/or treat diseases associated with APOC3 gene expression. In some embodiments, the disease is selected from the group consisting of hypertriglyceridemia, obesity, hyperlipidemia, abnormalities of lipid and/or cholesterol metabolism, atherosclerosis, cardiovascular disease, coronary artery disease, hyperglycemia Triesteremia-induced pancreatitis, metabolic syndrome, type II diabetes, familial chylomicronemia syndrome Symptoms or familial partial lipodystrophy.
在一些实施方案中,所述的药物可用于预防和/或治疗由升高的甘油三酯水平或升高的胆固醇水平介导的疾病。在一些实施方案中,所述疾病选自高甘油三酯血症、肥胖症、高脂血症、脂质和/或胆固醇代谢异常、动脉粥样硬化、心血管疾病、冠状动脉疾病、高甘油三酯血症诱导的胰腺炎、代谢综合征、II型糖尿病、家族性乳糜微粒血症综合征或家族性部分脂质营养不良。In some embodiments, the medicaments may be used to prevent and/or treat diseases mediated by elevated triglyceride levels or elevated cholesterol levels. In some embodiments, the disease is selected from the group consisting of hypertriglyceridemia, obesity, hyperlipidemia, abnormalities of lipid and/or cholesterol metabolism, atherosclerosis, cardiovascular disease, coronary artery disease, hyperglycemia Triesteremia-induced pancreatitis, metabolic syndrome, type 2 diabetes, familial chylomicronemia syndrome, or familial partial lipodystrophy.
另一方面,本公开提供了一种预防和/或治疗疾病的方法,其包括向受试者给予有效量或有效剂量的上述的寡核苷酸或上述的药物组合物。On the other hand, the present disclosure provides a method for preventing and/or treating diseases, which includes administering an effective amount or an effective dose of the above-mentioned oligonucleotide or the above-mentioned pharmaceutical composition to a subject.
在一些实施方案中,所述的疾病可为与脂蛋白(a)和/或载脂蛋白(a)水平升高相关的疾病。在一些实施方案中,所述与脂蛋白(a)和/或载脂蛋白(a)水平升高相关的疾病选自心血管疾病。在一些实施方案中,所述心血管疾病选自缺血性中风、动脉粥样硬化、血栓形成、冠心病、下肢动脉病变或主动脉瓣狭窄、心肌梗塞、冠状动脉狭窄、颈动脉狭窄、股动脉狭窄、心脏衰竭。In some embodiments, the disease may be a disease associated with elevated levels of lipoprotein(a) and/or apolipoprotein(a). In some embodiments, the disease associated with elevated levels of lipoprotein(a) and/or apolipoprotein(a) is selected from cardiovascular disease. In some embodiments, the cardiovascular disease is selected from the group consisting of ischemic stroke, atherosclerosis, thrombosis, coronary heart disease, lower extremity arterial disease or aortic stenosis, myocardial infarction, coronary artery stenosis, carotid artery stenosis, femoral stenosis, Arterial narrowing, heart failure.
在一些实施方案中,所述的疾病可为心血管疾病。在一些实施方案中,所述心血管疾病选自缺血性中风、动脉粥样硬化、血栓形成、冠心病、下肢动脉病变或主动脉瓣狭窄、心肌梗塞、冠状动脉狭窄、颈动脉狭窄、股动脉狭窄、心脏衰竭。In some embodiments, the disease may be cardiovascular disease. In some embodiments, the cardiovascular disease is selected from the group consisting of ischemic stroke, atherosclerosis, thrombosis, coronary heart disease, lower extremity arterial disease or aortic stenosis, myocardial infarction, coronary artery stenosis, carotid artery stenosis, femoral stenosis, Arterial narrowing, heart failure.
在一些实施方案中,所述的疾病可为与乙型肝炎病毒相关的疾病。在一些实施方案中,所述与乙型肝炎病毒相关的疾病是慢性肝炎,所述受试者是HBeAg阳性或HBeAg阴性。在一些实施方案中,所述与乙型肝炎病毒相关的疾病是乙型肝炎;在一些实施方案中,所述乙型肝炎选自慢性乙型肝炎或急性乙型肝炎。In some embodiments, the disease may be a disease associated with hepatitis B virus. In some embodiments, the disease associated with hepatitis B virus is chronic hepatitis and the subject is HBeAg positive or HBeAg negative. In some embodiments, the disease associated with the hepatitis B virus is hepatitis B; in some embodiments, the hepatitis B is selected from chronic hepatitis B or acute hepatitis B.
在一些实施方案中,所述的疾病可为与APOC3基因表达相关的疾病。在一些实施方案中,所述疾病选自高甘油三酯血症、肥胖症、高脂血症、脂质和/或胆固醇代谢异常、动脉粥样硬化、心血管疾病、冠状动脉疾病、高甘油三酯血症诱导的胰腺炎、代谢综合征、II型糖尿病、家族性乳糜微粒血症综合征或家族性部分脂质营养不良。In some embodiments, the disease may be a disease associated with APOC3 gene expression. In some embodiments, the disease is selected from the group consisting of hypertriglyceridemia, obesity, hyperlipidemia, abnormalities of lipid and/or cholesterol metabolism, atherosclerosis, cardiovascular disease, coronary artery disease, hyperglycemia Triesteremia-induced pancreatitis, metabolic syndrome, type 2 diabetes, familial chylomicronemia syndrome, or familial partial lipodystrophy.
在一些实施方案中,所述的疾病可为由升高的甘油三酯水平或升高的胆固醇水平介导的疾病。在一些实施方案中,所述疾病选自高甘油三酯血症、肥胖症、高脂血症、脂质和/或胆固醇代谢异常、动脉粥样硬化、心血管疾病、冠状动脉疾病、高甘油三酯血症诱导的胰腺炎、代谢综合征、II型糖尿病、家族性乳糜微粒血症综合征或家族性部分脂质营养不良。In some embodiments, the disease may be a disease mediated by elevated triglyceride levels or elevated cholesterol levels. In some embodiments, the disease is selected from the group consisting of hypertriglyceridemia, obesity, hyperlipidemia, abnormalities of lipid and/or cholesterol metabolism, atherosclerosis, cardiovascular disease, coronary artery disease, hyperglycemia Triesteremia-induced pancreatitis, metabolic syndrome, type 2 diabetes, familial chylomicronemia syndrome, or familial partial lipodystrophy.
在一些实施方案中,所述的疾病可为血栓栓塞性并发症。在一些实施方案中,所述的血栓栓塞性并发症可为深静脉血栓形成、肺栓塞、心肌梗塞或中风。In some embodiments, the disease may be a thromboembolic complication. In some embodiments, the thromboembolic complication may be deep vein thrombosis, pulmonary embolism, myocardial infarction, or stroke.
另一方面,本公开提供了一种降低受试者中的低密度脂蛋白水平的方法,其包括向受试者给予有效量或有效剂量的上述的寡核苷酸或上述的药物组合物。 On the other hand, the present disclosure provides a method for reducing low-density lipoprotein levels in a subject, which includes administering to the subject an effective amount or an effective dose of the above-mentioned oligonucleotide or the above-mentioned pharmaceutical composition.
在一些实施方案中,所述的寡核苷酸或药物组合物的有效量或有效剂量为约0.001mg/kg体重至约200mg/kg体重、约0.01mg/kg体重至约100mg/kg体重或约0.5mg/kg体重至约50mg/kg体重。In some embodiments, the effective amount or dosage of the oligonucleotide or pharmaceutical composition is about 0.001 mg/kg body weight to about 200 mg/kg body weight, about 0.01 mg/kg body weight to about 100 mg/kg body weight, or About 0.5 mg/kg body weight to about 50 mg/kg body weight.
另一方面,本公开提供了一种降低受试者中的载脂蛋白(a)和/或载脂蛋白(a)水平的方法,其包括向受试者给予有效量或有效剂量的上述的寡核苷酸或上述的药物组合物。In another aspect, the present disclosure provides a method of reducing apolipoprotein(a) and/or apolipoprotein(a) levels in a subject, which includes administering to the subject an effective amount or an effective dose of the above. Oligonucleotides or pharmaceutical compositions as described above.
在一些实施方案中,所述的寡核苷酸或药物组合物的有效量或有效剂量为约0.001mg/kg体重至约200mg/kg体重、约0.01mg/kg体重至约100mg/kg体重或约0.5mg/kg体重至约50mg/kg体重。In some embodiments, the effective amount or dosage of the oligonucleotide or pharmaceutical composition is about 0.001 mg/kg body weight to about 200 mg/kg body weight, about 0.01 mg/kg body weight to about 100 mg/kg body weight, or About 0.5 mg/kg body weight to about 50 mg/kg body weight.
另一方面,本公开提供了一种用于在体内或在体外沉默细胞中靶基因或其mRNA的方法,其包括将上述的寡核苷酸或上述的药物组合物引入该细胞中的步骤。On the other hand, the present disclosure provides a method for silencing a target gene or its mRNA in a cell in vivo or in vitro, which includes the step of introducing the above-mentioned oligonucleotide or the above-mentioned pharmaceutical composition into the cell.
在一些实施方案中,本公开的寡核苷酸或药物组合物可以在细胞、细胞群、组织或受试者等对象中降低靶基因或其mRNA的表达水平,包括:向对象给予治疗有效量的本文所述的寡核苷酸或药物组合物,从而抑制靶基因或其mRNA在对象中的表达。In some embodiments, an oligonucleotide or pharmaceutical composition of the present disclosure can reduce the expression level of a target gene or its mRNA in a cell, cell population, tissue, or subject, including: administering a therapeutically effective amount to the subject An oligonucleotide or pharmaceutical composition described herein, thereby inhibiting the expression of a target gene or its mRNA in a subject.
在一些实施方案中,所述对象已在先前被鉴定为在靶向的细胞、细胞群、组织或受试者中具有靶基因或其mRNA的病理性上调。In some embodiments, the subject has been previously identified as having pathological upregulation of the target gene or its mRNA in the targeted cell, cell population, tissue, or subject.
另一方面,本公开提供了一种递送寡核苷酸至肝脏的方法,其包括向受试者给予有效量或有效剂量的上述的寡核苷酸或上述的药物组合物。On the other hand, the present disclosure provides a method of delivering an oligonucleotide to the liver, which includes administering an effective amount or an effective dosage of the above-mentioned oligonucleotide or the above-mentioned pharmaceutical composition to a subject.
另一方面,本公开还提供了一种细胞,其包含上述的寡核苷酸或上述的药物组合物。On the other hand, the present disclosure also provides a cell comprising the above-mentioned oligonucleotide or the above-mentioned pharmaceutical composition.
另一方面,本公开还提供了一种试剂盒,其包含上述的寡核苷酸或上述的药物组合物。On the other hand, the present disclosure also provides a kit comprising the above-mentioned oligonucleotide or the above-mentioned pharmaceutical composition.
本公开中,上述寡核苷酸或药物组合物当接触到表达靶基因的细胞时,由例如:psiCHECK活性筛选和荧光素酶报告基因检测法,其他如PCR或基于分支DNA(bDNA)的方法,或基于蛋白质的方法,如免疫荧光分析法,例如Western Blot或流式细胞术测定的,上述寡核苷酸或药物组合物会抑制靶基因的表达至少5%、至少10%、至少15%、至少20%、至少25%、至少30%、至少35%、至少40%、至少45%、至少50%、至少55%、至少60%、至少65%、至少70%、至少75%、至少80%、至少85%、至少90%、至少91%、至少92%、至少93%、至少94%、至少95%、至少96%、至少97%、至少98%、或至少99%。In the present disclosure, when the above-mentioned oligonucleotide or pharmaceutical composition comes into contact with cells expressing the target gene, it is detected by, for example: psiCHECK activity screening and luciferase reporter gene detection methods, other methods such as PCR or branched DNA (bDNA)-based methods. , or protein-based methods, such as immunofluorescence analysis, such as Western Blot or flow cytometry, the above oligonucleotide or pharmaceutical composition will inhibit the expression of the target gene by at least 5%, at least 10%, at least 15% , at least 20%, at least 25%, at least 30%, at least 35%, at least 40%, at least 45%, at least 50%, at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99%.
本公开中,上述寡核苷酸或药物组合物当接触到表达靶基因的细胞时,由例如:psiCHECK活性筛选和荧光素酶报告基因检测法,其他如PCR或基于分支DNA(bDNA)的方法,或基于蛋白质的方法,如免疫荧光分析法,例如Western Blot 或流式细胞术测定的,上述寡核苷酸或药物组合物引起的靶基因mRNA剩余表达百分比为不高于99%、不高于95%、不高于90%、不高于85%、不高于80%、不高于75%、不高于70%、不高于65%、不高于60%、不高于55%、不高于50%、不高于45%、不高于40%、不高于35%、不高于30%、不高于25%、不高于20%、不高于15%、或不高于10%。In the present disclosure, when the above-mentioned oligonucleotide or pharmaceutical composition comes into contact with cells expressing the target gene, it is detected by, for example: psiCHECK activity screening and luciferase reporter gene detection methods, other methods such as PCR or branched DNA (bDNA)-based methods. , or protein-based methods such as immunofluorescence assays, such as Western Blot Or measured by flow cytometry, the remaining expression percentage of the target gene mRNA caused by the above-mentioned oligonucleotide or pharmaceutical composition is no more than 99%, no more than 95%, no more than 90%, no more than 85%, Not higher than 80%, not higher than 75%, not higher than 70%, not higher than 65%, not higher than 60%, not higher than 55%, not higher than 50%, not higher than 45%, not higher No more than 40%, no more than 35%, no more than 30%, no more than 25%, no more than 20%, no more than 15%, or no more than 10%.
本公开中,上述寡核苷酸或药物组合物当接触到表达靶基因的细胞时,由例如:psiCHECK活性筛选和荧光素酶报告基因检测法,其他如PCR或基于分支DNA(bDNA)的方法,或基于蛋白质的方法,如免疫荧光分析法,例如Western Blot、或流式细胞术测定的,寡核苷酸在保持在靶活性的同时,将脱靶活性减少了至少20%、至少25%、至少30%、至少35%、至少40%、至少45%、至少50%、至少55%、至少60%、至少65%、至少70%或至少75%。In the present disclosure, when the above-mentioned oligonucleotide or pharmaceutical composition comes into contact with cells expressing the target gene, it is detected by, for example: psiCHECK activity screening and luciferase reporter gene detection methods, other methods such as PCR or branched DNA (bDNA)-based methods. , or protein-based methods, such as immunofluorescence assays, such as Western Blot, or flow cytometry, the oligonucleotide reduces off-target activity by at least 20%, at least 25%, while maintaining target activity. At least 30%, at least 35%, at least 40%, at least 45%, at least 50%, at least 55%, at least 60%, at least 65%, at least 70%, or at least 75%.
本公开中,上述寡核苷酸或药物组合物当接触到表达靶基因的细胞时,由例如:psiCHECK活性筛选和荧光素酶报告基因检测法,其他如PCR或基于分支DNA(bDNA)的方法,或基于蛋白质的方法,如免疫荧光分析法,例如Western Blot、或流式细胞术测定的,寡核苷酸使在靶活性降低至多20%、至多19%、至多15%、至多10%、至多5%或超过1%的同时,将脱靶活性减少了至少20%、至少25%、至少30%、至少35%、至少40%、至少45%、至少50%、至少55%、至少60%、至少65%、至少70%或至少75%。In the present disclosure, when the above-mentioned oligonucleotide or pharmaceutical composition comes into contact with cells expressing the target gene, it is detected by, for example: psiCHECK activity screening and luciferase reporter gene detection methods, other methods such as PCR or branched DNA (bDNA)-based methods. , or protein-based methods such as immunofluorescence assays, such as Western Blot, or flow cytometry, oligonucleotides reduce on-target activity by up to 20%, up to 19%, up to 15%, up to 10%, Up to 5% or more than 1% while reducing off-target activity by at least 20%, at least 25%, at least 30%, at least 35%, at least 40%, at least 45%, at least 50%, at least 55%, at least 60% , at least 65%, at least 70%, or at least 75%.
本公开还提供了一种制备寡核苷酸或药物组合物的方法,其包括:合成本公开所述的寡核苷酸或药物组合物。The present disclosure also provides a method of preparing an oligonucleotide or pharmaceutical composition, which includes: synthesizing the oligonucleotide or pharmaceutical composition described in the present disclosure.
如无特殊说明,本公开的“核酸”、“寡核苷酸”、“单链寡核苷酸”、“双链寡核苷酸”、“反义寡核苷酸”、“小干扰RNA(siRNA)”、“双链RNA(dsRNA)”、“微RNA(miRNA)”、“短发夹RNA(shRNA)”、“核糖酶”、“RNAi抑制剂分子”、“双链RNAi抑制剂分子”和“Dicer酶底物”、“化合物”,均可独立地以盐、混合盐或非盐(例如游离酸或游离碱)的形式存在。当以盐或混合盐的形式存在时,其可为药学上可接受的盐。Unless otherwise specified, the terms “nucleic acid”, “oligonucleotide”, “single-stranded oligonucleotide”, “double-stranded oligonucleotide”, “antisense oligonucleotide” and “small interfering RNA” in this disclosure (siRNA)", "double-stranded RNA (dsRNA)", "microRNA (miRNA)", "short hairpin RNA (shRNA)", "ribozyme", "RNAi inhibitor molecule", "double-stranded RNAi inhibitor" "Molecular" and "Dicer enzyme substrate" and "compound" may independently exist in the form of salts, mixed salts, or non-salts (eg, free acids or free bases). When present in the form of a salt or mixed salts, they may be pharmaceutically acceptable salts.
术语“药学上可接受的盐”包括药学上可接受的酸加成盐和药学上可接受的碱加成盐。The term "pharmaceutically acceptable salts" includes pharmaceutically acceptable acid addition salts and pharmaceutically acceptable base addition salts.
在一些实施方案中,“药学上可接受的酸加成盐”是指能够保留游离碱的生物有效性而无其它副作用的,与无机酸或有机酸所形成的盐。无机酸盐包括但不限于盐酸盐、氢溴酸盐、硫酸盐、硝酸盐、磷酸盐等;有机酸盐包括但不限于甲酸盐、乙酸盐、2,2-二氯乙酸盐、三氟乙酸盐、丙酸盐、己酸盐、辛酸盐、癸酸盐、十一碳烯酸盐、乙醇酸盐、葡糖酸盐、乳酸盐、癸二酸盐、己二酸盐、戊二酸盐、丙二酸盐、草酸盐、马来酸盐、琥珀酸盐、富马酸盐、酒石酸盐、柠檬酸盐、棕榈酸盐、硬脂酸盐、油酸盐、肉桂酸盐、月桂酸盐、苹果酸盐、谷氨酸盐、焦谷 氨酸盐、天冬氨酸盐、苯甲酸盐、甲磺酸盐、苯磺酸盐、对甲苯磺酸盐、海藻酸盐、抗坏血酸盐、水杨酸盐、4-氨基水杨酸盐、萘二磺酸盐等。这些盐可通过本领域已知的方法制备。In some embodiments, "pharmaceutically acceptable acid addition salts" refer to salts formed with inorganic or organic acids that retain the biological effectiveness of the free base without other side effects. Inorganic acid salts include but are not limited to hydrochlorides, hydrobromides, sulfates, nitrates, phosphates, etc.; organic acid salts include but are not limited to formates, acetates, and 2,2-dichloroacetates. , trifluoroacetate, propionate, caproate, caprylate, decanoate, undecenoate, glycolate, gluconate, lactate, sebacate, adipate Acid, glutarate, malonate, oxalate, maleate, succinate, fumarate, tartrate, citrate, palmitate, stearate, oleate , cinnamate, laurate, malate, glutamate, coke Amate, aspartate, benzoate, mesylate, benzenesulfonate, p-toluenesulfonate, alginate, ascorbate, salicylate, 4-aminosalicylate , naphthalene disulfonate, etc. These salts can be prepared by methods known in the art.
“药学上可接受的碱加成盐”是指能够保持游离酸的生物有效性而无其它副作用的、与无机碱或有机碱所形成的盐。衍生自无机碱的盐包括但不限于钠盐、钾盐、锂盐、铵盐、钙盐、镁盐、铁盐、锌盐、铜盐、锰盐、铝盐等。优选的无机盐为铵盐、钠盐、钾盐、钙盐及镁盐,优选钠盐。衍生自有机碱的盐包括但不限于以下的盐:伯胺类、仲胺类及叔胺类,被取代的胺类,包括天然的被取代胺类、环状胺类及碱性离子交换树脂,例如氨、异丙胺、三甲胺、二乙胺、三乙胺、三丙胺、乙醇胺、二乙醇胺、三乙醇胺、二甲基乙醇胺、2-二甲氨基乙醇、2-二乙氨基乙醇、二环己胺、赖氨酸、精氨酸、组氨酸、咖啡因、普鲁卡因、胆碱、甜菜碱、乙二胺、葡萄糖胺、甲基葡萄糖胺、可可碱、嘌呤、哌嗪、哌啶、N-乙基哌啶、聚胺树脂等。优选的有机碱包括异丙胺、二乙胺、乙醇胺、三甲胺、二环己基胺、胆碱及咖啡因。这些盐可通过本领域已知的方法制备。"Pharmaceutically acceptable base addition salts" refer to salts formed with inorganic or organic bases that can maintain the biological effectiveness of the free acid without other side effects. Salts derived from inorganic bases include, but are not limited to, sodium salts, potassium salts, lithium salts, ammonium salts, calcium salts, magnesium salts, iron salts, zinc salts, copper salts, manganese salts, aluminum salts, and the like. Preferred inorganic salts are ammonium salt, sodium salt, potassium salt, calcium salt and magnesium salt, with sodium salt being preferred. Salts derived from organic bases include, but are not limited to, the following salts: primary, secondary and tertiary amines, substituted amines, including natural substituted amines, cyclic amines and basic ion exchange resins , such as ammonia, isopropylamine, trimethylamine, diethylamine, triethylamine, tripropylamine, ethanolamine, diethanolamine, triethanolamine, dimethylethanolamine, 2-dimethylaminoethanol, 2-diethylaminoethanol, bicyclic Hexylamine, lysine, arginine, histidine, caffeine, procaine, choline, betaine, ethylenediamine, glucosamine, methylglucosamine, theobromine, purine, piperazine, piperazine Biridine, N-ethylpiperidine, polyamine resin, etc. Preferred organic bases include isopropylamine, diethylamine, ethanolamine, trimethylamine, dicyclohexylamine, choline and caffeine. These salts can be prepared by methods known in the art.
在不指明构型的情况下,本公开化合物(例如寡核苷酸、siRNA、式(I)所示的化学修饰、靶向配体、式(IV)所示的化合物等)可以存在特定的几何或立体异构体形式。本公开设想所有的这类化合物,包括顺式和反式异构体、(-)-和(+)-对对映体、(R)-和(S)-对映体、非对映异构体、(D)-异构体、(L)-异构体,及其外消旋混合物和其他混合物,例如对映异构体或非对映体富集的混合物,所有这些混合物都属于本公开的范围之内。烷基等取代基中可存在另外的不对称碳原子。所有这些异构体以及它们的混合物,均包括在本公开的范围之内。本公开的含有不对称碳原子的化合物可以以光学活性纯的形式或外消旋形式被分离出来。光学活性纯的形式可以从外消旋混合物拆分,或通过使用手性原料或手性试剂合成。Without specifying the configuration, the compounds of the present disclosure (such as oligonucleotides, siRNA, chemical modifications represented by formula (I), targeting ligands, compounds represented by formula (IV), etc.) may exist in specific Geometric or stereoisomeric forms. This disclosure contemplates all such compounds, including cis and trans isomers, (-)- and (+)-enantiomers, (R)- and (S)-enantiomers, diastereomers isomers, (D)-isomers, (L)-isomers, and racemic mixtures thereof and other mixtures, such as enantiomeric or diastereomerically enriched mixtures, all of which are within the scope of this disclosure. Additional asymmetric carbon atoms may be present in substituents such as alkyl groups. All such isomers, as well as mixtures thereof, are included within the scope of this disclosure. Compounds of the present disclosure containing asymmetric carbon atoms can be isolated in optically active pure form or racemic form. Optically active pure forms can be resolved from racemic mixtures or synthesized by using chiral starting materials or chiral reagents.
可以通过手性合成或手性试剂或者其他常规技术制备光学活性的(R)-和(S)-异构体以及D和L异构体。如果想得到本公开某化合物的一种对映体,可以通过不对称合成或者具有手性助剂的衍生作用来制备,其中将所得非对映体混合物分离,并且辅助基团裂开以提供纯的所需对映异构体。或者,当分子中含有碱性官能团(如氨基)或酸性官能团(如羧基)时,与适当的光学活性的酸或碱形成非对映异构体的盐,然后通过本领域所公知的常规方法进行非对映异构体拆分,然后回收得到纯的对映体。此外,对映异构体和非对映异构体的分离通常是通过使用色谱法完成的,所述色谱法采用手性固定相,并任选地与化学衍生法相结合(例如由胺生成氨基甲酸盐)。The optically active (R)- and (S)-isomers as well as the D and L isomers can be prepared by chiral synthesis or chiral reagents or other conventional techniques. If one enantiomer of a compound of the present disclosure is desired, it can be prepared by asymmetric synthesis or derivatization with chiral auxiliaries, where the resulting diastereomeric mixture is separated and the auxiliary group is cleaved to provide pure desired enantiomer. Alternatively, when the molecule contains a basic functional group (such as an amino group) or an acidic functional group (such as a carboxyl group), a diastereomeric salt is formed with a suitable optically active acid or base, and then the salt is formed by conventional methods known in the art. Diastereomeric resolution is performed and the pure enantiomers are recovered. Furthermore, the separation of enantiomers and diastereomers is usually accomplished by the use of chromatography using chiral stationary phases, optionally combined with chemical derivatization methods (e.g., generation of amino groups from amines). formate).
在不指明构型的情况下,本公开所述化合物(例如寡核苷酸、siRNA、式(I)所示的化学修饰、靶向配体、式(IV)所示的化合物等)的化学结构中,键表示未指定构型,即如果化学结构中存在手性异构体,键可以为 或者同时包含两种构型。本公开所述化合物的化学结构中,键并未指定构型,即键的构型可以为E型或Z型,或者同时包含E和Z两种构型。Without specifying the configuration, the chemistry of the compounds described in the present disclosure (such as oligonucleotides, siRNA, chemical modifications represented by formula (I), targeting ligands, compounds represented by formula (IV), etc.) structure, key Indicates that the configuration is not specified, i.e. if there are chiral isomers in the chemical structure, the bond can be or both Two configurations. In the chemical structure of the compounds described in this disclosure, the bond No configuration is specified, i.e. the key The configuration can be E-type or Z-type, or contain both E and Z configurations.
本公开还包括一些与本文中记载的那些相同的,但一个或多个原子被原子量或质量数不同于自然中通常发现的原子量或质量数的原子置换的同位素标记的本公开化合物。可结合到本公开化合物的同位素的实例包括氢、碳、氮、氧、磷、硫、氟、碘和氯的同位素,诸如分别为2H、3H、11C、13C、14C、13N、15N、15O、17O、18O、31P、32P、35S、18F、123I、125I和36Cl等。The present disclosure also includes some isotopically labeled compounds that are the same as those described herein, but in which one or more atoms are replaced by an atom having an atomic weight or mass number different from that typically found in nature. Examples of isotopes that may be incorporated into the compounds of the present disclosure include isotopes of hydrogen, carbon, nitrogen, oxygen, phosphorus, sulfur, fluorine, iodine, and chlorine, such as 2 H, 3 H, 11 C, 13 C, 14 C, 13 respectively N, 15 N, 15 O, 17 O, 18 O, 31 P, 32 P, 35 S, 18 F, 123 I, 125 I and 36 Cl, etc.
相比于未氘代药物,氘代药物有降低毒副作用、增加药物稳定性、增强疗效、延长药物生物半衰期等优势。本公开的化合物的所有同位素组成的变换,无论放射性与否,都包括在本公开的范围之内。与碳原子连接的各个可用的氢原子可独立地被氘原子替换,其中氘的替换可以是部分或完全的,部分氘的替换是指至少一个氢被至少一个氘替换。Compared with non-deuterated drugs, deuterated drugs have the advantages of reducing side effects, increasing drug stability, enhancing efficacy, and extending the biological half-life of the drug. All variations in the isotopic composition of the compounds of the present disclosure, whether radioactive or not, are included within the scope of the present disclosure. Each available hydrogen atom connected to a carbon atom can be independently replaced by a deuterium atom, where the replacement of deuterium can be partial or complete. The replacement of partial deuterium means that at least one hydrogen is replaced by at least one deuterium.
除另有说明,本公开的化合物,当其一个位置被特别地指定为“氘”或“D”时,该位置应理解为氘的丰度比氘的天然丰度(其为0.015%)大至少1000倍(即至少15%的氘掺入)。在一些实施方案中,每个被指定的氘原子的氘的丰度比氘的天然丰度大至少1000倍(即至少15%的氘掺入)。在一些实施方案中,每个被指定的氘原子的氘的丰度比氘的天然丰度大至少2000倍(即至少30%的氘掺入)。在一些实施方案中,每个被指定的氘原子的氘的丰度比氘的天然丰度大至少3000倍(即至少45%的氘掺入)。在一些实施方案中,每个被指定的氘原子的氘的丰度比氘的天然丰度大至少3340倍(即至少50.1%的氘掺入)。在一些实施方案中,每个被指定的氘原子的氘的丰度比氘的天然丰度大至少3500倍(即至少52.5%的氘掺入)。在一些实施方案中,每个被指定的氘原子的氘的丰度比氘的天然丰度大至少4000倍(即至少60%的氘掺入)。在一些实施方案中,每个被指定的氘原子的氘的丰度比氘的天然丰度大至少4500倍(即至少67.5%的氘掺入)。在一些实施方案中,每个被指定的氘原子的氘的丰度比氘的天然丰度大至少5000倍(即至少75%的氘掺入)。在一些实施方案中,每个被指定的氘原子的氘的丰度比氘的天然丰度大至少5500倍(即至少82.5%的氘掺入)。在一些实施方案中,每个被指定的氘原子的氘的丰度比氘的天然丰度大至少6000倍(即至少90%的氘掺入)。在一些实施方案中,每个被指定的氘原子的氘的丰度比氘的天然丰度大至少6333.3倍(即至少95%的氘掺入)。在一些实施方案中,每个被指定的氘原子的氘的丰度比氘的天然丰度大至少6466.7倍(即至少97%的氘掺入)。在一些实施方案中,每个被指定的氘原子的氘的丰度比氘的天然丰度大至少6600倍(即至少99%的氘掺入)。在一些实施方案中,每个被指定的氘原子的氘的丰度比氘的天然丰度大至少6633.3倍(即至少99.5%的氘掺入)。本领域技术人员能够参考相关文献合成氘化形式的 化合物。在制备氘代形式的化合物时可使用市售的氘代起始物质,或它们可使用常规技术采用氘代试剂合成,氘代试剂包括但不限于氘代硼烷、三氘代硼烷四氢呋喃溶液、氘代氢化锂铝、氘代碘乙烷和氘代碘甲烷等。Unless otherwise stated, in a compound of the present disclosure, when a position is specifically designated as "deuterium" or "D", that position is understood to have an abundance of deuterium greater than the natural abundance of deuterium, which is 0.015%. At least 1000 times (i.e. at least 15% deuterium incorporation). In some embodiments, the abundance of deuterium per designated deuterium atom is at least 1000 times greater than the natural abundance of deuterium (ie, at least 15% deuterium incorporation). In some embodiments, the abundance of deuterium per designated deuterium atom is at least 2000 times greater than the natural abundance of deuterium (ie, at least 30% deuterium incorporation). In some embodiments, the abundance of deuterium per designated deuterium atom is at least 3000 times greater than the natural abundance of deuterium (ie, at least 45% deuterium incorporation). In some embodiments, the abundance of deuterium per designated deuterium atom is at least 3340 times greater than the natural abundance of deuterium (ie, at least 50.1% deuterium incorporation). In some embodiments, the abundance of deuterium per designated deuterium atom is at least 3500 times greater than the natural abundance of deuterium (ie, at least 52.5% deuterium incorporation). In some embodiments, the abundance of deuterium per designated deuterium atom is at least 4000 times greater than the natural abundance of deuterium (ie, at least 60% deuterium incorporation). In some embodiments, the abundance of deuterium per designated deuterium atom is at least 4500 times greater than the natural abundance of deuterium (ie, at least 67.5% deuterium incorporation). In some embodiments, the abundance of deuterium per designated deuterium atom is at least 5000 times greater than the natural abundance of deuterium (ie, at least 75% deuterium incorporation). In some embodiments, the abundance of deuterium per designated deuterium atom is at least 5500 times greater than the natural abundance of deuterium (ie, at least 82.5% deuterium incorporation). In some embodiments, the abundance of deuterium per designated deuterium atom is at least 6000 times greater than the natural abundance of deuterium (ie, at least 90% deuterium incorporation). In some embodiments, the abundance of deuterium per designated deuterium atom is at least 6333.3 times greater than the natural abundance of deuterium (ie, at least 95% deuterium incorporation). In some embodiments, the abundance of deuterium per designated deuterium atom is at least 6466.7 times greater than the natural abundance of deuterium (ie, at least 97% deuterium incorporation). In some embodiments, the abundance of deuterium per designated deuterium atom is at least 6600 times greater than the natural abundance of deuterium (ie, at least 99% deuterium incorporation). In some embodiments, the abundance of deuterium per designated deuterium atom is at least 6633.3 times greater than the natural abundance of deuterium (ie, at least 99.5% deuterium incorporation). Those skilled in the art can refer to relevant literature to synthesize the deuterated form of compound. Commercially available deuterated starting materials may be used in the preparation of deuterated forms of the compounds, or they may be synthesized using conventional techniques using deuterated reagents including, but not limited to, deuterated borane, trideuterated borane in tetrahydrofuran. , Deuterated lithium aluminum hydride, deuterated ethyl iodide and deuterated methyl iodide, etc.
另外,在不指明构型的情况下,本公开的化合物和中间体(例如寡核苷酸、siRNA、式(I)所示的化学修饰、靶向配体、式(IV)所示的化合物等)还可以以不同的互变异构体形式存在,并且所有这样的形式包含于本公开的范围内。术语“互变异构体”或“互变异构体形式”是指可经由低能垒互变的不同能量的结构异构体。例如,质子互变异构体(也称为质子转移互变异构体)包括经由质子迁移的互变,如酮-烯醇及亚胺-烯胺、内酰胺-内酰亚胺异构化。内酰胺-内酰亚胺平衡实例是在如下所示的A和B之间,
In addition, without specifying the configuration, the compounds and intermediates of the present disclosure (such as oligonucleotides, siRNA, chemical modifications represented by formula (I), targeting ligands, compounds represented by formula (IV) etc.) may also exist in different tautomeric forms, and all such forms are included within the scope of this disclosure. The term "tautomer" or "tautomeric form" refers to structural isomers of different energies that can interconvert via a low energy barrier. For example, proton tautomers (also called proton transfer tautomers) include tautomers via proton migration, such as keto-enol and imine-enamine, lactam-lactam isomerizations . An example of a lactam-lactam equilibrium is between A and B as shown below,
所有的互变异构形式在本公开的范围内。化合物的命名不排除任何互变异构体。All tautomeric forms are within the scope of this disclosure. The naming of the compounds does not exclude any tautomers.
本公开引入WO2023274395A、PCT/CN2022/139500全文。This disclosure incorporates the full text of WO2023274395A and PCT/CN2022/139500.
术语解释Terminology explanation
为了更容易理解本公开,以下具体定义了一些技术和科学术语。除非在本文中另有明确定义,本文使用的所有其它技术和科学术语都具有本公开所属领域的一般技术人员通常理解的含义。In order to make the present disclosure easier to understand, some technical and scientific terms are specifically defined below. Unless otherwise clearly defined herein, all other technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the art to which this disclosure belongs.
如无特别说明,在本公开上下文中,术语“载脂蛋白(a)基因”、“Apo(a)基因”、“LPA”在本公开中可互换使用。LPA包括但不限于人类LPA、食蟹猴LPA、小鼠LPA、大鼠LPA,其氨基酸和完整编码序列、mRNA序列容易利用已公开的数据库取得,例如,GenBank、UniProt、OMIM和猕猴(Macaca)基因组计划网站。Unless otherwise specified, in the context of this disclosure, the terms "apolipoprotein(a) gene", "Apo(a) gene", and "LPA" are used interchangeably in this disclosure. LPA includes but is not limited to human LPA, cynomolgus LPA, mouse LPA, and rat LPA. Its amino acid, complete coding sequence, and mRNA sequence are easily obtained using published databases, such as GenBank, UniProt, OMIM, and macaque (Macaca). Genome Project website.
术语“靶序列”指在LPA转录期间所形成的mRNA分子的核苷酸序列的连续部分,包括作为主要转录产物的RNA加工产物的mRNA。所述靶序列中被靶向的部分应当足够长,才能作为iRNA指导的切割(iRNA-directed cleavage)的底物。在一个实施方式中,该靶序列在LPA的蛋白质编码区内。The term "target sequence" refers to the contiguous portion of the nucleotide sequence of the mRNA molecule formed during the transcription of LPA, including the mRNA as the primary transcript product of RNA processing. The targeted portion of the target sequence should be long enough to serve as a substrate for iRNA-directed cleavage. In one embodiment, the target sequence is within the protein coding region of LPA.
如本文所使用的,在RNA介导的基因沉默的情形中,正义链(又称SS、SS链或有义链)是指包含与靶mRNA序列相同或基本上相同的序列的链;反义链(又称AS或AS链)是指具有与靶mRNA序列互补的序列的链。As used herein, in the context of RNA-mediated gene silencing, the sense strand (also known as SS, SS strand, or sense strand) refers to the strand that contains the same or substantially the same sequence as the target mRNA sequence; antisense A strand (also known as AS or AS strand) refers to a strand that has a sequence complementary to the target mRNA sequence.
在描述本文所述的正义链的上下文中,术语“正义链包含SEQ ID NO:1的至少15个连续核苷酸”旨在表示本文所述的正义链包含如SEQ ID NO:1的至少15个连续核苷酸,任选地,本文所述的正义链包含SEQ ID NO:1的至少16个连续 核苷酸、本文所述的正义链包含SEQ ID NO:1的至少18个连续核苷酸、本文所述的正义链包含SEQ ID NO:1的至少19个连续核苷酸。In the context of describing the sense strand described herein, the term "sense strand comprising at least 15 consecutive nucleotides of SEQ ID NO:1" is intended to mean that the sense strand described herein comprises at least 15 consecutive nucleotides of SEQ ID NO:1 consecutive nucleotides, optionally, the sense strand described herein includes at least 16 consecutive nucleotides of SEQ ID NO:1 Nucleotides, the sense strand described herein includes at least 18 consecutive nucleotides of SEQ ID NO: 1, and the sense strand described herein includes at least 19 consecutive nucleotides of SEQ ID NO: 1.
在描述本文所述的反义链的上下文中,术语“反义链包含SEQ ID NO:2的核苷酸序列至少15个连续核苷酸”旨在表示本文所述的反义链包含如SEQ ID NO:2的至少15个连续核苷酸,任选地,本文所述的反义链包含SEQ ID NO:2的至少16个连续核苷酸、本文所述的反义链包含SEQ ID NO:2的至少18个连续核苷酸、本文所述的反义链包含SEQ ID NO:2的至少19个连续核苷酸、本文所述的反义链包含SEQ ID NO:2的至少20个连续核苷酸、本文所述的反义链包含SEQ ID NO:2的至少21个连续核苷酸。In the context of describing an antisense strand as described herein, the term "antisense strand comprising at least 15 consecutive nucleotides of the nucleotide sequence of SEQ ID NO: 2" is intended to mean that the antisense strand as described herein comprises SEQ ID NO:2 At least 15 consecutive nucleotides of SEQ ID NO: 2. Optionally, the antisense strand described herein includes at least 16 consecutive nucleotides of SEQ ID NO: 2. The antisense strand described herein includes SEQ ID NO. : at least 18 consecutive nucleotides of SEQ ID NO:2, the antisense strand described herein includes at least 19 consecutive nucleotides of SEQ ID NO:2, the antisense strand described herein includes at least 20 of SEQ ID NO:2 Contiguous nucleotides, the antisense strand described herein includes at least 21 contiguous nucleotides of SEQ ID NO: 2.
如本文所使用的,在RNA介导的基因沉默的情形中,正义链(又称SS、SS链或有义链)是指包含与靶mRNA序列相同或基本上相同的序列的链;反义链(又称AS或AS链)是指具有与靶mRNA序列互补的序列的链。As used herein, in the context of RNA-mediated gene silencing, the sense strand (also known as SS, SS strand, or sense strand) refers to the strand that contains the same or substantially the same sequence as the target mRNA sequence; antisense A strand (also known as AS or AS strand) refers to a strand that has a sequence complementary to the target mRNA sequence.
如无特别说明,本公开上下文中,“G”、“C”、“A”、“T”与“U”分别代表核苷酸,其分别包含鸟嘌呤、胞嘧啶、腺嘌呤、胸苷与尿嘧啶的碱基。小写字母m表示该字母m上游相邻的一个核苷酸为甲氧基修饰的核苷酸;小写字母f表示该字母f上游相邻的一个核苷酸为氟代修饰的核苷酸;小写字母s表示与该字母s左右相邻的两个核苷酸之间为硫代磷酸二酯基连接。Unless otherwise specified, in the context of this disclosure, "G", "C", "A", "T" and "U" respectively represent nucleotides, which respectively include guanine, cytosine, adenine, thymidine and The base of uracil. The lowercase letter m indicates that the nucleotide adjacent to the upstream of the letter m is a methoxy-modified nucleotide; the lowercase letter f indicates that the nucleotide adjacent to the upstream of the letter f is a fluoro-modified nucleotide; lowercase letter The letter s indicates that the two nucleotides adjacent to the left and right of the letter s are connected by phosphorothioate diester groups.
本公开中,若无特别说明,天然核苷酸间的磷酸酯基为磷酸二酯基。In the present disclosure, unless otherwise specified, the phosphate group between natural nucleotides is a phosphodiester group.
本公开中,硫代磷酸二酯基是指一个非桥接氧原子被硫原子替代而修饰的磷酸二酯基,可用(M为S原子)互换使用。In the present disclosure, a phosphorothioate diester group refers to a phosphodiester group in which a non-bridging oxygen atom is replaced by a sulfur atom. (M is S atom) are used interchangeably.
如本公开所使用的,术语“2'-氟代修饰的核苷酸”指核苷酸的核糖基2'位的羟基被氟取代形成的核苷酸,“非2'-氟代修饰的核苷酸”指核苷酸的核糖基2'位的羟基被非氟基团取代形成的核苷酸或核苷酸类似物。As used in this disclosure, the term "2'-fluoromodified nucleotide" refers to a nucleotide in which the hydroxyl group at the 2' position of the ribosyl group of the nucleotide is replaced by fluorine. "Non-2'-fluoromodified nucleotide" "Nucleotide" refers to a nucleotide or nucleotide analogue formed by replacing the 2' hydroxyl group of the ribose group with a non-fluorine group.
如本公开所使用的,术语“2'-甲氧基修饰的核苷酸”指核糖基的2'-羟基被甲氧基取代而形成的核苷酸。As used in this disclosure, the term "2'-methoxy modified nucleotide" refers to a nucleotide in which the 2'-hydroxyl group of the ribosyl group is replaced by a methoxy group.
在本公开的上下文中,一个核苷酸序列与另外一个核苷酸序列存在“核苷酸差异”、“相差不超过n个核苷酸”,是指前者与后者相比,相同位置的核苷酸的碱基种类发生了改变,例如,在后者中一个核苷酸碱基为A时,在前者的相同位置处的对应核苷酸碱基为U、C、G或者T的情况下,认定为两个核苷酸序列之间在该位置处存在核苷酸差异,或相差一个核苷酸。在一些实施方式中,在不是式(I)所示的化学修饰或其互变异构体修饰的位置,以无碱基核苷酸或其等同物代替原位置的核苷酸时,也可认为在该位置处产生了核苷酸差异。 In the context of this disclosure, "nucleotide differences" and "no more than n nucleotide differences" between one nucleotide sequence and another nucleotide sequence refer to the fact that the former has the same position as the latter compared to the latter. The base type of the nucleotide has changed. For example, when one nucleotide base is A in the latter, the corresponding nucleotide base at the same position in the former is U, C, G or T. , it is considered that there is a nucleotide difference at this position between the two nucleotide sequences, or a difference of one nucleotide. In some embodiments, when the nucleotide at the original position is replaced by an abasic nucleotide or its equivalent at a position that is not a chemical modification represented by formula (I) or a tautomer modification thereof, it can also be It is believed that a nucleotide difference occurs at this position.
如本文所使用的,术语“互补”或“反向互补”一词可互相替代使用,并具有本领域技术人员周知的含义,即,在双链核酸分子中,一条链的碱基与另一条链上的碱基以互补的方式相配对。在DNA中,嘌呤碱基腺嘌呤(A)始终与嘧啶碱基胸腺嘧啶(T)(或者在RNA中为尿嘧啶(U))相配对;嘌呤碱基鸟嘌呤(C)始终与嘧啶碱基胞嘧啶(G)相配对。每个碱基对都包括一个嘌呤和一个嘧啶。当一条链上的腺嘌呤始终与另一条链上的胸腺嘧啶(或尿嘧啶)配对,以及鸟嘌呤始终与胞嘧啶配对时,两条链被认为是彼此相互补的,以及从其互补链的序列中可以推断出该链的序列。与此相应地,“错配”在本领域中意指在双链核酸中,对应位置上的碱基并未以互补的形式配对存在。As used herein, the terms "complementary" or "reverse complementary" are used interchangeably and have the meaning well known to those skilled in the art, i.e., in a double-stranded nucleic acid molecule, the bases of one strand are in contact with the bases of the other strand. The bases in the strand are paired in a complementary manner. In DNA, the purine base adenine (A) always pairs with the pyrimidine base thymine (T) (or uracil (U) in RNA); the purine base guanine (C) always pairs with the pyrimidine base Pairs with cytosine (G). Each base pair consists of a purine and a pyrimidine. When adenine on one strand always pairs with thymine (or uracil) on the other strand, and guanine always pairs with cytosine, the two strands are said to be complementary to each other, and from their complementary strands The sequence of the chain can be inferred from the sequence. Correspondingly, "mismatch" in this field means that in double-stranded nucleic acids, the bases at corresponding positions do not pair in a complementary manner.
如本文所使用的,术语“抑制”,可以与“减少”、“沉默”、“下调”、“阻抑”和其他类似术语交替使用,并且包括任何水平的抑制。As used herein, the term "inhibition," may be used interchangeably with "reduction," "silencing," "downregulation," "repression" and other similar terms and includes any level of inhibition.
“有效量”或“有效剂量”指获得任一种或多种有益的或所需的治疗结果所必需的药物、化合物或药物组合物的量。对于预防用途,有益的或所需的结果包括消除或降低风险、减轻严重性或延迟病症的发作,包括病症、其并发症和在病症的发展过程中呈现的中间病理表型的生物化学、组织学和/或行为症状。对于治疗应用,有益的或所需的结果包括临床结果,诸如减少各种本公开靶基因、靶mRNA或靶蛋白相关病症的发病率或改善所述病症的一个或更多个症状,减少治疗病症所需的其它药剂的剂量,增强另一种药剂的疗效,和/或延缓患者的本公开靶基因、靶mRNA或靶蛋白相关病症的进展。"Effective amount" or "effective dosage" refers to the amount of a drug, compound, or pharmaceutical composition necessary to obtain any one or more beneficial or desired therapeutic results. For prophylactic uses, beneficial or desired results include elimination or reduction of risk, reduction of severity, or delay of onset of a condition, including biochemical, histological, and biological aspects of the condition, its complications, and intermediate pathological phenotypes present during the development of the condition. academic and/or behavioral symptoms. For therapeutic applications, beneficial or desired results include clinical results, such as reducing the incidence of, or ameliorating one or more symptoms of, various target gene, target mRNA, or target protein-related disorders of the present disclosure, reducing the treated disorder The dosage of the other agent required to enhance the efficacy of the other agent and/or delay the progression of a disorder associated with the target gene, target mRNA or target protein of the present disclosure in a patient.
在一些实施方案中,寡核苷酸、双链RNAi抑制剂分子或siRNA的有效量或有效剂量为约0.001mg/kg体重至约200mg/kg体重、约0.01mg/kg体重至约100mg/kg体重或约0.5mg/kg体重至约50mg/kg体重。In some embodiments, the effective amount or dosage of the oligonucleotide, double-stranded RNAi inhibitor molecule or siRNA is from about 0.001 mg/kg body weight to about 200 mg/kg body weight, from about 0.01 mg/kg body weight to about 100 mg/kg Body weight or about 0.5 mg/kg body weight to about 50 mg/kg body weight.
“药物组合物”包含本公开的寡核苷酸、双链RNAi抑制剂分子或siRNA以及药学上可接受的辅料和/或佐剂,该辅料可以为一种或多种本领域常规采用的各种制剂或化合物。例如,所述药学上可接受的辅料可以包括pH缓冲剂、保护剂和渗透压调节剂中的至少一种。"Pharmaceutical composition" includes the oligonucleotide, double-stranded RNAi inhibitor molecule or siRNA of the present disclosure and pharmaceutically acceptable excipients and/or adjuvants. The excipients can be one or more various substances commonly used in the art. a preparation or compound. For example, the pharmaceutically acceptable excipients may include at least one of a pH buffer, a protective agent, and an osmotic pressure regulator.
如本文所使用的,“对象”、“患者”、“受试者”或“个体”可互换使用,包括人类或者非人类动物,例如哺乳动物,例如人或猴。As used herein, "subject," "patient," "subject" or "individual" are used interchangeably and include humans or non-human animals, such as mammals, such as humans or monkeys.
本公开提供的寡核苷酸、双链RNAi抑制剂分子或siRNA可以通过本领域常规的制备方法(例如固相合成和液相合成的方法)得到。其中,固相合成已经有商业化订制服务。可以通过使用具有相应修饰的核苷单体来将修饰的核苷酸基团引入本公开所述的寡核苷酸、双链RNAi抑制剂分子或siRNA中,制备具有相应修饰的核苷单体的方法及将修饰的核苷酸基团引入寡核苷酸、双链RNAi抑制剂分子或siRNA的方法也是本领域技术人员所熟知的。The oligonucleotides, double-stranded RNAi inhibitor molecules or siRNA provided by the present disclosure can be obtained by conventional preparation methods in the art (such as solid phase synthesis and liquid phase synthesis methods). Among them, solid-phase synthesis already has commercial customization services. Nucleoside monomers with corresponding modifications can be prepared by using nucleoside monomers with corresponding modifications to introduce modified nucleotide groups into oligonucleotides, double-stranded RNAi inhibitor molecules, or siRNAs described in the present disclosure. Methods and methods of introducing modified nucleotide groups into oligonucleotides, double-stranded RNAi inhibitor molecules or siRNA are also well known to those skilled in the art.
术语“化学修饰”或“修饰”包括核苷酸经化学手段的所有改变,例如化学 部分的添加或去除、或以一个化学部分取代另一个化学部分。The term "chemical modification" or "modification" includes all changes in nucleotides by chemical means, e.g. The addition or removal of moieties, or the substitution of one chemical moiety for another.
术语“碱基”包含任何已知的DNA和RNA碱基、碱基类似物,例如嘌呤或嘧啶,其还包括天然化合物腺嘌呤、胸腺嘧啶、鸟嘌呤、胞嘧啶、尿嘧啶、次黄苷和天然类似物。碱基类似物还可以是通用碱基。The term "base" includes any known DNA and RNA base, base analogues, such as purine or pyrimidine, and also includes the natural compounds adenine, thymine, guanine, cytosine, uracil, inosine, and Natural analogues. Base analogs can also be universal bases.
术语“平端”或“平末端”可互换使用,是指在siRNA的给定的末端没有非配对的核苷酸或核苷酸类似物,即,没有核苷酸突出。大多数情况下,两个末端都是平末端的siRNA将在其整个长度范围内是双链的。The terms "blunt end" or "blunt end" are used interchangeably and mean that there are no unpaired nucleotides or nucleotide analogs at a given end of the siRNA, ie, no nucleotide overhangs. In most cases, an siRNA that is blunt-ended at both ends will be double-stranded throughout its length.
术语“约”、“大约”是指数值在由本领域一般技术人员所测定的具体值的可接受误差范围内,所述数值部分取决于怎样测量或测定(即测量体系的限度)。例如,“约”可意味着在1内或超过1的标准差。或者,“约”或“基本上包含”可意味着至多20%的范围,例如在1%至15%之间、在1%至10%之间、在1%至5%之间、在0.5%至5%之间、在0.5%至1%之间变化。本公开中,数字或数值范围之前有术语“约”的每种情况也包括给定数的实施方案。除非另外说明,否则当具体值在本申请和权利要求中出现时,“约”或“基本上包含”的含义应该假定为在该具体值的可接受误差范围内。The terms "about" and "approximately" mean that a value is within an acceptable error range for a particular value as determined by one of ordinary skill in the art, which value depends in part on how it is measured or determined (i.e., the limits of the measurement system). For example, "about" can mean within 1 or more than 1 standard deviation. Alternatively, "about" or "consisting essentially of" may mean a range of up to 20%, such as between 1% and 15%, between 1% and 10%, between 1% and 5%, between 0.5% It varies between 0.5% and 1%. In this disclosure, every instance in which a number or numerical range is preceded by the term "about" also includes the embodiment of the given number. Unless stated otherwise, when a specific value appears in this application and claims, the meaning of "about" or "substantially comprising" should be assumed to be within an acceptable error range for that specific value.
术语“任选地”或“任选”是指意味着随后所描述的事件或环境可以但不必发生,该说明包括该事件或环境发生或不发生的场合。例如“任选的被卤素或者氰基取代的C1-6烷基”是指卤素或者氰基可以但不必须存在,该说明包括烷基被卤素或者氰基取代的情形和烷基不被卤素和氰基取代的情形。The terms "optionally" or "optionally" are intended to mean that the subsequently described event or circumstance may but need not occur, and that the description includes instances where the event or circumstance does or does not occur. For example, "C 1-6 alkyl optionally substituted by halogen or cyano group" means that halogen or cyano group may but does not have to be present. This description includes the case where the alkyl group is substituted by halogen or cyano group and the alkyl group is not substituted by halogen. and the case of cyano substitution.
术语“烷基”指饱和脂肪族烃基团,其为包含1至20个碳原子的直链或支链基团,在一些实施方案中选自含有1至12个碳原子的烷基。非限制性实例包括甲基、乙基、正丙基、异丙基、正丁基、异丁基、叔丁基、仲丁基、正戊基、1,1-二甲基丙基、1,2-二甲基丙基、2,2-二甲基丙基、1-乙基丙基、2-甲基丁基、3-甲基丁基、正己基、1-乙基-2-甲基丙基、1,1,2-三甲基丙基、1,1-二甲基丁基、1,2-二甲基丁基、2,2-二甲基丁基、1,3-二甲基丁基、2-乙基丁基、2-甲基戊基、3-甲基戊基、4-甲基戊基、2,3-二甲基丁基、正庚基、2-甲基己基、3-甲基己基、4-甲基己基、5-甲基己基、2,3-二甲基戊基、2,4-二甲基戊基、2,2-二甲基戊基、3,3-二甲基戊基、2-乙基戊基、3-乙基戊基、正辛基、2,3-二甲基己基、2,4-二甲基己基、2,5-二甲基己基、2,2-二甲基己基、3,3-二甲基己基、4,4-二甲基己基、2-乙基己基、3-乙基己基、4-乙基己基、2-甲基-2-乙基戊基、2-甲基-3-乙基戊基、正壬基、2-甲基-2-乙基己基、2-甲基-3-乙基己基、2,2-二乙基戊基、正癸基、3,3-二乙基己基、2,2-二乙基己基,及其各种支链异构体等。在一些实施方案中选自的是含有1至6个碳原子的烷基,非限制性实施例包括甲基、乙基、正丙基、异丙基、正丁基、异丁基、叔丁基、仲丁基、正戊基、1,1-二甲基丙基、1,2-二甲基丙基、2,2-二甲基丙基、1-乙基丙基、2-甲基丁基、3-甲基丁基、正己基、1-乙基-2-甲基丙基、1,1,2-三甲基 丙基、1,1-二甲基丁基、1,2-二甲基丁基、2,2-二甲基丁基、1,3-二甲基丁基、2-乙基丁基、2-甲基戊基、3-甲基戊基、4-甲基戊基、2,3-二甲基丁基等。烷基可以是取代的或非取代的,当被取代时,取代基可以在任何可使用的连接点上被取代,所述取代基在一些实施方案中选自一个或多个以下基团,其独立地选自烷基、烯基、炔基、烷氧基、烷硫基、烷基氨基、卤素、巯基、羟基、硝基、氰基、环烷基、杂环烷基、芳基、杂芳基、环烷氧基、杂环烷氧基、环烷硫基、杂环烷硫基、氧代基、羧基或羧酸酯基。The term "alkyl" refers to a saturated aliphatic hydrocarbon group that is a straight or branched chain group containing 1 to 20 carbon atoms, and in some embodiments is selected from alkyl groups containing 1 to 12 carbon atoms. Non-limiting examples include methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, tert-butyl, sec-butyl, n-pentyl, 1,1-dimethylpropyl, 1 ,2-dimethylpropyl, 2,2-dimethylpropyl, 1-ethylpropyl, 2-methylbutyl, 3-methylbutyl, n-hexyl, 1-ethyl-2- Methylpropyl, 1,1,2-trimethylpropyl, 1,1-dimethylbutyl, 1,2-dimethylbutyl, 2,2-dimethylbutyl, 1,3 -Dimethylbutyl, 2-ethylbutyl, 2-methylpentyl, 3-methylpentyl, 4-methylpentyl, 2,3-dimethylbutyl, n-heptyl, 2 -Methylhexyl, 3-methylhexyl, 4-methylhexyl, 5-methylhexyl, 2,3-dimethylpentyl, 2,4-dimethylpentyl, 2,2-dimethyl Pentyl, 3,3-dimethylpentyl, 2-ethylpentyl, 3-ethylpentyl, n-octyl, 2,3-dimethylhexyl, 2,4-dimethylhexyl, 2 ,5-dimethylhexyl, 2,2-dimethylhexyl, 3,3-dimethylhexyl, 4,4-dimethylhexyl, 2-ethylhexyl, 3-ethylhexyl, 4-ethyl Hexyl, 2-methyl-2-ethylpentyl, 2-methyl-3-ethylpentyl, n-nonyl, 2-methyl-2-ethylhexyl, 2-methyl-3-ethyl Hexyl, 2,2-diethylpentyl, n-decyl, 3,3-diethylhexyl, 2,2-diethylhexyl, and various branched isomers, etc. In some embodiments selected from alkyl groups containing 1 to 6 carbon atoms, non-limiting examples include methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, tert-butyl base, sec-butyl, n-pentyl, 1,1-dimethylpropyl, 1,2-dimethylpropyl, 2,2-dimethylpropyl, 1-ethylpropyl, 2-methyl Butyl, 3-methylbutyl, n-hexyl, 1-ethyl-2-methylpropyl, 1,1,2-trimethyl Propyl, 1,1-dimethylbutyl, 1,2-dimethylbutyl, 2,2-dimethylbutyl, 1,3-dimethylbutyl, 2-ethylbutyl, 2-methylpentyl, 3-methylpentyl, 4-methylpentyl, 2,3-dimethylbutyl, etc. Alkyl groups may be substituted or unsubstituted, and when substituted, the substituents may be substituted at any available point of attachment, which in some embodiments are selected from one or more of the following groups, which Independently selected from alkyl, alkenyl, alkynyl, alkoxy, alkylthio, alkylamino, halogen, mercapto, hydroxyl, nitro, cyano, cycloalkyl, heterocycloalkyl, aryl, hetero Aryl, cycloalkoxy, heterocycloalkoxy, cycloalkylthio, heterocycloalkylthio, oxo, carboxyl or carboxylate group.
术语“烷氧基”指-O-(烷基),其中烷基的定义如上所述。烷氧基的非限制性实例包括:甲氧基、乙氧基、丙氧基、丁氧基。烷氧基可以是任选取代的或非取代的,当被取代时,取代基优选为一个或多个以下基团,其独立地选自卤素、羟基、氧代、氰基、氨基、C1-6烷基、C1-6烷氧基、3至7元环烷基或3至7元杂环烷基,所述烷基、烷氧基、环烷基或杂环烷基任选被卤素、羟基、硝基、氰基或氨基所取代。The term "alkoxy" refers to -O-(alkyl), where alkyl is as defined above. Non-limiting examples of alkoxy include: methoxy, ethoxy, propoxy, butoxy. The alkoxy group may be optionally substituted or unsubstituted. When substituted, the substituent is preferably one or more of the following groups, which are independently selected from halogen, hydroxyl, oxo, cyano, amino, C 1 -6 alkyl, C 1-6 alkoxy, 3 to 7-membered cycloalkyl or 3 to 7-membered heterocycloalkyl, the alkyl, alkoxy, cycloalkyl or heterocycloalkyl is optionally Substituted by halogen, hydroxyl, nitro, cyano or amino.
术语“烷硫基”指-S-(烷基),其中烷基的定义如上所述。烷硫基的非限制性实例包括:甲硫基、乙硫基、丙硫基、丁硫基。烷硫基可以是任选取代的或非取代的,当被取代时,取代基优选为一个或多个以下基团,其独立地选自C1-6烷氧基、3至6元环烷基、3至6元杂环烷基、3至6元环烷氧基、3至6元杂环烷氧基、C1-6烷硫基、3至6元环烷硫基、3至6元杂环烷硫基,所述烷氧基、环烷基、杂环烷基、环烷氧基、杂环氧基、烷硫基、环烷硫基、杂环烷硫基任选被卤素、羟基、氰基或氨基所取代。The term "alkylthio" refers to -S-(alkyl), where alkyl is as defined above. Non-limiting examples of alkylthio groups include: methylthio, ethylthio, propylthio, butylthio. The alkylthio group may be optionally substituted or unsubstituted. When substituted, the substituent is preferably one or more of the following groups, which are independently selected from C 1-6 alkoxy, 3 to 6 membered cycloalkyl base, 3 to 6-membered heterocycloalkyl group, 3 to 6-membered cycloalkoxy group, 3 to 6-membered heterocycloalkoxy group, C 1-6 alkylthio group, 3 to 6-membered cycloalkylthio group, 3 to 6 One-membered heterocycloalkylthio group, the alkoxy group, cycloalkyl group, heterocycloalkyl group, cycloalkoxy group, heterocyclic oxy group, alkylthio group, cycloalkylthio group and heterocycloalkylthio group are optionally replaced by halogen , hydroxyl, cyano or amino substituted.
术语“烯基”指直链或支链的非芳香族烃基,其含有至少一个碳-碳双键,并且具有2-10个碳原子。在这样的基团中可以存在多达5个碳-碳双键。例如,“C2-C6”烯基被定义为具有2-6个碳原子的烯基。烯基的示例包括但不限于:乙烯基、丙烯基、丁烯基和环己烯基。烯基的直链、支链或环状部分可以含有双键,并且在正常化合价所允许的任何位置任选地被单-、二-、三-、四-或五-取代。The term "alkenyl" refers to a straight or branched chain non-aromatic hydrocarbon radical containing at least one carbon-carbon double bond and having 2 to 10 carbon atoms. Up to 5 carbon-carbon double bonds can be present in such groups. For example, "C 2- C 6 "alkenyl is defined as an alkenyl group having 2 to 6 carbon atoms. Examples of alkenyl groups include, but are not limited to: vinyl, propenyl, butenyl, and cyclohexenyl. The linear, branched or cyclic portion of the alkenyl group may contain double bonds and is optionally mono-, di-, tri-, tetra- or penta-substituted at any position permitted by normal valency.
术语“炔基”指直链或支链的烃基,其含有2-10个碳原子并且含有至少一个碳-碳三键。可以存在多达5个碳-碳三键。因此,“C2-C6炔基”表示具有2-6个碳原子的烯基。炔基的示例包括但不限于:乙炔基、2-丙炔基和2-丁炔基。炔基的直链、支链部分可以含有正常化合价所允许的三键,并且在正常化合价所允许的任何位置任选地被单-、二-、三-、四-或五-取代。The term "alkynyl" refers to a straight or branched chain hydrocarbon group containing 2 to 10 carbon atoms and containing at least one carbon-carbon triple bond. Up to 5 carbon-carbon triple bonds can be present. Thus, "C 2 -C 6 alkynyl" means an alkenyl group having 2 to 6 carbon atoms. Examples of alkynyl groups include, but are not limited to: ethynyl, 2-propynyl, and 2-butynyl. The linear, branched portion of the alkynyl group may contain as many triple bonds as normal valency allows, and may be optionally mono-, di-, tri-, tetra- or penta-substituted at any position permitted by normal valency.
术语“环烷基”或“碳环”指饱和或部分不饱和单环或多环环状烃取代基,环烷基环包含3至20个碳原子,在一些实施方案中选自包含3至7个碳原子。单环环烷基的非限制性实例包括环丙基、环丁基、环戊基、环戊烯基、环己基、环己烯基、环己二烯基等;多环环烷基包括螺环、稠环和桥环的环烷基。环烷基可以是取代的或未取代的,当被取代时,取代基可以在任何可使用的连接点上被取 代,在一些实施方案中选自一个或多个以下基团,独立地选自卤素、氘、羟基、氧代、硝基、氰基、C1-6烷基、C1-6烷氧基、C2-6烯氧基、C2-6炔氧基、C3-6环烷氧基、3至6元杂环烷氧基、C3-8环烯氧基、5至6元芳基或杂芳基,所述C1-6烷基、C1-6烷氧基、C2-6烯氧基、C2-6炔氧基、C3-6环烷氧基、3至6元杂环烷氧基、C3-8环烯氧基、5至6元芳基或杂芳基任选被一个或多个选自卤素、氘、羟基、氧代、硝基、氰基所取代。The term "cycloalkyl" or "carbocycle" refers to a saturated or partially unsaturated monocyclic or polycyclic cyclic hydrocarbon substituent. The cycloalkyl ring contains 3 to 20 carbon atoms, and in some embodiments is selected from the group consisting of 3 to 20 carbon atoms. 7 carbon atoms. Non-limiting examples of monocyclic cycloalkyl groups include cyclopropyl, cyclobutyl, cyclopentyl, cyclopentenyl, cyclohexyl, cyclohexenyl, cyclohexadienyl, etc.; polycyclic cycloalkyl groups include spiro Cycloalkyl groups of rings, fused rings and bridged rings. Cycloalkyl groups may be substituted or unsubstituted, and when substituted, the substituents may be taken at any available point of attachment. Generation, in some embodiments selected from one or more of the following groups, independently selected from halogen, deuterium, hydroxyl, oxo, nitro, cyano, C 1-6 alkyl, C 1-6 alkoxy , C 2-6 alkenyloxy group, C 2-6 alkynyloxy group, C 3-6 cycloalkoxy group, 3 to 6 membered heterocycloalkoxy group, C 3-8 cycloalkenyloxy group, 5 to 6 membered aromatic group base or heteroaryl, the C 1-6 alkyl, C 1-6 alkoxy, C 2-6 alkenyloxy, C 2-6 alkynyloxy, C 3-6 cycloalkoxy , 3 to 6-membered heterocycloalkoxy, C 3-8 cycloalkenyloxy, 5 to 6-membered aryl or heteroaryl are optionally substituted by one or more members selected from halogen, deuterium, hydroxyl, oxo, nitro, and cyano. replaced.
所述环烷基环可以稠合于芳基或杂芳基环上,其中与母体结构连接在一起的环为环烷基,非限制性实例包括茚满基、四氢萘基、苯并环庚烷基等。环烷基可以是任选取代的或非取代的,当被取代时,取代基在一些实施方案中选自一个或多个以下基团,其独立地选自卤素、氘、羟基、氧代、硝基、氰基、C1-6烷基、C1-6烷氧基、C2-6烯氧基、C2-6炔氧基、C3-6环烷氧基、3至6元杂环烷氧基、C3-8环烯氧基、5至6元芳基或杂芳基,所述C1-6烷基、C1-6烷氧基、C2-6烯氧基、C2-6炔氧基、C3-6环烷氧基、3至6元杂环烷氧基、C3-8环烯氧基、5至6元芳基或杂芳基任选被一个或多个选自卤素、氘、羟基、氧代、硝基、氰基所取代。The cycloalkyl ring can be fused to an aryl or heteroaryl ring, where the ring attached to the parent structure is a cycloalkyl ring, non-limiting examples include indanyl, tetrahydronaphthyl, benzo ring Heptyl etc. Cycloalkyl groups may be optionally substituted or unsubstituted, and when substituted, the substituents are in some embodiments selected from one or more of the following groups, which are independently selected from halogen, deuterium, hydroxyl, oxo, Nitro, cyano, C 1-6 alkyl, C 1-6 alkoxy, C 2-6 alkenoxy, C 2-6 alkynyloxy, C 3-6 cycloalkoxy, 3 to 6 yuan Heterocycloalkoxy, C 3-8 cycloalkenoxy, 5 to 6-membered aryl or heteroaryl, the C 1-6 alkyl, C 1-6 alkoxy, C 2-6 alkenoxy , C 2-6 alkynyloxy, C 3-6 cycloalkoxy, 3 to 6-membered heterocycloalkoxy, C 3-8 cycloalkenyloxy, 5 to 6-membered aryl or heteroaryl are optionally One or more substitutes selected from halogen, deuterium, hydroxyl, oxo, nitro, and cyano.
术语“杂环烷基”或“杂环”或“杂环基”指饱和或部分不饱和单环或多环环状烃取代基,其包含3至20个环原子,其中一个或多个环原子为选自氮、氧或S(O)m(其中m是整数0至2)的杂原子,但不包括-O-O-、-O-S-或-S-S-的环部分,其余环原子为碳。在一些实施方案中选自包含3至12个环原子,其中1~4个是杂原子;在一些实施方案中选自包含3至7个环原子。单环杂环烷基的非限制性实例包括吡咯烷基、咪唑烷基、四氢呋喃基、四氢噻吩基、二氢咪唑基、二氢呋喃基、二氢吡唑基、二氢吡咯基、哌啶基、哌嗪基、吗啉基、硫代吗啉基、高哌嗪基等。多环杂环烷基包括螺环、稠环和桥环的杂环烷基。“杂环烷基”非限制性实例包括:The term "heterocycloalkyl" or "heterocycle" or "heterocyclyl" refers to a saturated or partially unsaturated monocyclic or polycyclic cyclic hydrocarbon substituent containing from 3 to 20 ring atoms, one or more of which The atoms are heteroatoms selected from nitrogen, oxygen or S(O) m (where m is an integer from 0 to 2), but excluding the ring part of -OO-, -OS- or -SS-, the remaining ring atoms are carbon. In some embodiments, it is selected from 3 to 12 ring atoms, of which 1 to 4 are heteroatoms; in some embodiments, it is selected from 3 to 7 ring atoms. Non-limiting examples of monocyclic heterocycloalkyl groups include pyrrolidinyl, imidazolidinyl, tetrahydrofuryl, tetrahydrothienyl, dihydroimidazolyl, dihydrofuryl, dihydropyrazolyl, dihydropyrrolyl, piperazoyl Aldyl, piperazinyl, morpholinyl, thiomorpholinyl, homopiperazinyl, etc. Polycyclic heterocycloalkyl groups include spiro, fused and bridged heterocycloalkyl groups. Non-limiting examples of "heterocycloalkyl" include:
等等。 etc.
所述杂环烷基环可以稠合于芳基或杂芳基环上,其中与母体结构连接在一起的环为杂环烷基,其非限制性实例包括:The heterocycloalkyl ring can be fused to an aryl or heteroaryl ring, where the ring attached to the parent structure is heterocycloalkyl, non-limiting examples of which include:
等。 wait.
杂环烷基可以是任选取代的或非取代的,当被取代时,取代基在一些实施方案中选自一个或多个以下基团,其独立地选自卤素、氘、羟基、氧代、硝基、氰基、C1-6烷基、C1-6烷氧基、C2-6烯氧基、C2-6炔氧基、C3-6环烷氧基、3至6元杂环烷氧基、C3-8环烯氧基、5至6元芳基或杂芳基,所述C1-6烷基、C1-6烷氧基、C2-6烯氧基、C2-6炔氧基、C3-6环烷氧基、3至6元杂环烷氧基、C3-8环烯氧基、5至6元芳基或杂芳基任选被一个或多个选自卤素、氘、羟基、氧代、硝基、氰基所取代。Heterocycloalkyl may be optionally substituted or unsubstituted, and when substituted, the substituent in some embodiments is selected from one or more of the following groups, which are independently selected from halogen, deuterium, hydroxyl, oxo , nitro, cyano, C 1-6 alkyl, C 1-6 alkoxy, C 2-6 alkenoxy, C 2-6 alkynyloxy, C 3-6 cycloalkoxy, 3 to 6 1-membered heterocycloalkoxy, C 3-8 cycloalkenoxy, 5 to 6-membered aryl or heteroaryl, the C 1-6 alkyl, C 1-6 alkoxy, C 2-6 alkenyl base, C 2-6 alkynyloxy group, C 3-6 cycloalkoxy group, 3 to 6 membered heterocycloalkoxy group, C 3-8 cycloalkenyloxy group, 5 to 6 membered aryl group or heteroaryl group optional Substituted by one or more selected from halogen, deuterium, hydroxyl, oxo, nitro, and cyano.
术语“芳基”指具有共轭的π电子体系的6至14元全碳单环或稠合多环(也就是共享毗邻碳原子对的环)基团,在一些实施方案中选自6至12元,例如苯基和萘基。所述芳基环可以稠合于杂芳基、杂环烷基或环烷基环上,其中与母体结构连接在一起的环为芳基环,其非限制性实例包括:
The term "aryl" refers to a 6 to 14 membered all-carbon monocyclic or fused polycyclic (i.e., rings sharing pairs of adjacent carbon atoms) groups having a conjugated pi electron system, in some embodiments selected from 6 to 12-membered, such as phenyl and naphthyl. The aryl ring may be fused to a heteroaryl, heterocycloalkyl or cycloalkyl ring, where the ring attached to the parent structure is an aryl ring, non-limiting examples of which include:
芳基可以是取代的或非取代的,当被取代时,取代基在一些实施方案中选自一个或多个以下基团,其独立地选自卤素、氘、羟基、氧代、硝基、氰基、C1-6烷基、C1-6烷氧基、C2-6烯氧基、C2-6炔氧基、C3-6环烷氧基、3至6元杂环烷氧基、C3-8环烯氧基、5至6元芳基或杂芳基,所述C1-6烷基、C1-6烷氧基、C2-6烯氧基、C2-6炔氧基、C3-6环烷氧基、3至6元杂环烷氧基、C3-8环烯氧基、5至6元芳基或杂芳基任选被一个或多个选自卤素、氘、羟基、氧代、硝基、氰基所取代。Aryl groups may be substituted or unsubstituted, and when substituted, the substituents are in some embodiments selected from one or more of the following groups, which are independently selected from halogen, deuterium, hydroxyl, oxo, nitro, Cyano, C 1-6 alkyl, C 1-6 alkoxy, C 2-6 alkenyloxy, C 2-6 alkynyloxy, C 3-6 cycloalkoxy, 3 to 6 -membered heterocycloalkane Oxy group, C 3-8 cycloalkenyloxy group, 5 to 6-membered aryl group or heteroaryl group, the C 1-6 alkyl group, C 1-6 alkoxy group, C 2-6 alkenyloxy group, C 2 -6 alkynyloxy, C 3-6 cycloalkoxy, 3 to 6-membered heterocycloalkoxy, C 3-8 cycloalkenyloxy, 5 to 6-membered aryl or heteroaryl are optionally substituted by one or more Each is selected from the group consisting of halogen, deuterium, hydroxyl, oxo, nitro, and cyano.
术语“杂芳基”指包含1至4个杂原子、5至14个环原子的杂芳族体系,其中杂原子选自氧、硫和氮。杂芳基在一些实施方案中选自6至12元,更在一些实施方案中选自5元或6元。例如。其非限制性实例包括:咪唑基、呋喃基、噻吩基、噻唑基、吡唑基、噁唑基(oxazolyl)、异噁唑基(isoxazolyl)、吡咯基、四唑基、吡啶基、嘧啶基、噻二唑、吡嗪基、三唑基、吲唑基、苯并咪唑基、 等。The term "heteroaryl" refers to a heteroaromatic system containing 1 to 4 heteroatoms and 5 to 14 ring atoms, where the heteroatoms are selected from oxygen, sulfur and nitrogen. The heteroaryl group is selected from 6- to 12-membered in some embodiments, and in some embodiments is selected from 5- or 6-membered. For example. Non-limiting examples thereof include: imidazolyl, furyl, thienyl, thiazolyl, pyrazolyl, oxazolyl, isoxazolyl, pyrrolyl, tetrazolyl, pyridyl, pyrimidinyl , Thiadiazole, pyrazinyl, triazolyl, indazolyl, benzimidazolyl, wait.
所述杂芳基环可以稠合于芳基、杂环烷基或环烷基环上,其中与母体结构连接在一起的环为杂芳基环,其非限制性实例包括:
The heteroaryl ring may be fused to an aryl, heterocycloalkyl or cycloalkyl ring, where the ring attached to the parent structure is a heteroaryl ring, non-limiting examples of which include:
杂芳基可以是任选取代的或非取代的,当被取代时,取代基在一些实施方案中选自一个或多个以下基团,其独立地选自卤素、氘、羟基、氧代、硝基、氰基、C1-6烷基、C1-6烷氧基、C2-6烯氧基、C2-6炔氧基、C3-6环烷氧基、3至6元杂环烷氧基、C3-8环烯氧基、5至6元芳基或杂芳基,所述C1-6烷基、C1-6烷氧基、C2-6烯氧基、C2-6炔氧基、C3-6环烷氧基、3至6元杂环烷氧基、C3-8环烯氧基、5至6元芳基或杂芳基任选被一个或多个选自卤素、氘、羟基、氧代、硝基、氰基所取代。Heteroaryl groups may be optionally substituted or unsubstituted, and when substituted, the substituents are in some embodiments selected from one or more of the following groups, which are independently selected from halogen, deuterium, hydroxyl, oxo, Nitro, cyano, C 1-6 alkyl, C 1-6 alkoxy, C 2-6 alkenoxy, C 2-6 alkynyloxy, C 3-6 cycloalkoxy, 3 to 6 yuan Heterocycloalkoxy, C 3-8 cycloalkenoxy, 5 to 6-membered aryl or heteroaryl, the C 1-6 alkyl, C 1-6 alkoxy, C 2-6 alkenoxy , C 2-6 alkynyloxy, C 3-6 cycloalkoxy, 3 to 6-membered heterocycloalkoxy, C 3-8 cycloalkenyloxy, 5 to 6-membered aryl or heteroaryl are optionally One or more substitutes selected from halogen, deuterium, hydroxyl, oxo, nitro, and cyano.
术语“烷氨基”指具有结构-NH(C1-C12烷基)的基团。The term "alkylamino" refers to a group having the structure -NH (C1-C12 alkyl).
术语“羟烷基”指烷基被一个或多个羟基取代,其中烷基如上所定义。The term "hydroxyalkyl" refers to an alkyl group substituted with one or more hydroxyl groups, where alkyl is as defined above.
术语“羟基”指-OH基团。The term "hydroxy" refers to the -OH group.
术语“卤素”指氟、氯、溴或碘。The term "halogen" refers to fluorine, chlorine, bromine or iodine.
术语“卤代烷基”指被卤素取代的烷基,其中烷基如上所定义。The term "haloalkyl" refers to an alkyl group substituted by halogen, wherein alkyl is as defined above.
术语“卤代烷氧基”指被卤素取代的烷氧基,其中烷氧基如上所定义。The term "haloalkoxy" refers to an alkoxy group substituted by halogen, wherein alkoxy is as defined above.
术语“氰基”指-CN。The term "cyano" refers to -CN.
术语“硝基”指-NO2The term "nitro" refers to -NO2 .
术语“氧代”指=O基团,例如,碳原子与氧原子通过双键连接,其中形成酮或醛基。The term "oxo" refers to an =O group, for example, a carbon atom linked to an oxygen atom by a double bond, whereby a ketone or aldehyde group is formed.
术语“氨基”指-NH2The term "amino" refers to -NH2 .
术语“羧基”指-C(O)OH。The term "carboxy" refers to -C(O)OH.
在本公开的化学结构式中,可以连接一个或多个根据本文所述发明范围的任何基团;星号“*”表示手性中心。In the chemical structural formula of the present disclosure, One or more groups according to the scope of the invention described herein may be attached; an asterisk "*" indicates a chiral center.
术语“连接”,当表示两个分子之间的联系时,指两个分子通过共价键连接或者两个分子经由非共价键(例如,氢键或离子键)关联,包括直接连接、间接连接。The term "connection", when referring to a connection between two molecules, means that the two molecules are connected by a covalent bond or that the two molecules are associated via a non-covalent bond (e.g., hydrogen bonding or ionic bonding), including direct connection, indirect connection, connect.
术语“直接连接”指第一化合物或基团与第二化合物或基团在没有任何间插原子或原子基团的情况下连接。 The term "directly linked" means that a first compound or group is linked to a second compound or group without any intervening atoms or groups of atoms.
术语“间接连接”指第一化合物或基团与第二化合物或基团通过中间基团、化合物或分子(例如,连接基团)连接。The term "indirectly linked" means that a first compound or group is connected to a second compound or group through an intervening group, compound or molecule (eg, a linking group).
术语“取代的”表示指定原子(通常是碳、氧和氮原子)上的任何一个或多个氢原子被本文所限定的任何基团所替代,条件是不超过所述指定原子的正常化合价并且取代生成稳定化合物。取代基的非限制性示例包括C1-C6烷基、C2-C6烯基、C2-C6炔基、氰基、羟基、氧代基、羧基、环烷基、环烯基、杂环基、杂芳基、芳基、酮、烷氧基羰基、芳氧基羰基、杂芳氧基羰基或卤素(例如,F、Cl、Br、I)。当取代基是酮或氧代(即,=O)时,则原子上有两个(2个)氢被替代。The term "substituted" means that any one or more hydrogen atoms on a designated atom (generally carbon, oxygen, and nitrogen atoms) are replaced by any group defined herein, provided that the normal valency of the designated atom is not exceeded and Substitution produces stable compounds. Non-limiting examples of substituents include C1-C6 alkyl, C2-C6 alkenyl, C2-C6 alkynyl, cyano, hydroxyl, oxo, carboxyl, cycloalkyl, cycloalkenyl, heterocyclyl, heterocyclic Aryl, aryl, ketone, alkoxycarbonyl, aryloxycarbonyl, heteroaryloxycarbonyl or halogen (eg, F, Cl, Br, I). When the substituent is a ketone or oxo (ie, =O), then two (2) hydrogens on the atom are replaced.
“被一个或多个……取代”是指可以被单个或多个取代基取代。当被多个取代基取代时,可以是复数个相同取代基,也可以是一个或复数个不同取代基的组合。"Substituted by one or more" means that it may be substituted by single or multiple substituents. When substituted by multiple substituents, it may be a plurality of the same substituent, or it may be one or a combination of multiple different substituents.
术语“保护基”在常规的化学意义上用作可逆地使官能团在所期望的反应的某些条件下无反应性的基团。在所期望的反应之后,可以去除保护基以将受保护的官能团脱保护。所有保护基都应当可在不会降解显著比例的正合成的分子的条件下去除。The term "protecting group" is used in the conventional chemical sense as a group that reversibly renders a functional group unreactive under certain conditions of the desired reaction. After the desired reaction, the protecting group can be removed to deprotect the protected functional group. All protecting groups should be removable without degrading a significant proportion of the molecule being synthesized.
本公开中的一些缩略语定义如下:
DCE:1,2-二氯乙烷;
Sc(OTf)3:三氟甲烷磺酸钪;
THF:四氢呋喃;
Pd/C:钯-碳;
TFA:三氟乙酸;
DMF:二甲基甲酰胺;
DIPEA:N-乙基二异丙基胺;
HoBt:1-羟基苯并三唑;
EDCI:1-乙基-(3-二甲基氨基丙基)碳酰二亚胺盐酸盐;
DMTrCl:4,4'-双甲氧基三苯甲基氯;
DIEA:N,N-二异丙基乙胺;
HATU:2-(7-氮杂苯并三氮唑)-N,N,N',N'-四甲基脲六氟磷酸酯;
LiOH:氢氧化锂;
DMAP:4-二甲氨基吡啶;
HBTU:苯并三氮唑-N,N,N',N'-四甲基脲六氟磷酸盐;
CF3SO3H:三氟甲磺酸;
BnBr:溴化苄;
DEPBT:3-(二乙氧基磷酰氧基)-1,2,3-苯并三嗪-4-酮;
Bz:苯甲酰基保护基;
MMTr:甲氧基苯基二苯甲基;
DMTr:二甲氧三苯甲基保护基;
Piv:特戊酰基。
Some abbreviations used in this disclosure are defined as follows:
DCE: 1,2-dichloroethane;
Sc(OTf) 3 : scandium trifluoromethanesulfonate;
THF: tetrahydrofuran;
Pd/C: palladium-carbon;
TFA: trifluoroacetic acid;
DMF: dimethylformamide;
DIPEA: N-ethyldiisopropylamine;
HoBt: 1-hydroxybenzotriazole;
EDCI: 1-ethyl-(3-dimethylaminopropyl)carbodiimide hydrochloride;
DMTrCl: 4,4'-bismethoxytrityl chloride;
DIEA: N,N-diisopropylethylamine;
HATU: 2-(7-azabenzotriazole)-N,N,N',N'-tetramethylurea hexafluorophosphate;
LiOH: lithium hydroxide;
DMAP: 4-dimethylaminopyridine;
HBTU: benzotriazole-N,N,N',N'-tetramethylurea hexafluorophosphate;
CF 3 SO 3 H: trifluoromethanesulfonic acid;
BnBr: benzyl bromide;
DEPBT: 3-(diethoxyphosphoryloxy)-1,2,3-benzotriazin-4-one;
Bz: benzoyl protecting group;
MMTr: methoxyphenyl diphenylmethyl;
DMTr: dimethoxytrityl protecting group;
Piv: pivaloyl.
附图说明Description of the drawings
图1为TRD002218、TRD007205在给药后7天TTR中mRNA的表达量。Figure 1 shows the expression of mRNA in TTR of TRD002218 and TRD007205 7 days after administration.
图2为TRD002218、TRD007205在给药后28天TTR中mRNA的表达量。Figure 2 shows the expression of mRNA in TTR of TRD002218 and TRD007205 28 days after administration.
图3为第21天TJR100747、TJR100848与TJR100553小鼠血清Lp(a)含量,**表示各组与TJR100553对照比较,P<0.01。Figure 3 shows the serum Lp(a) content of TJR100747, TJR100848 and TJR100553 mice on day 21. ** indicates the comparison between each group and the TJR100553 control, P<0.01.
图4为第28天TJR100747、TJR100848与TJR100553小鼠血清Lp(a)含量,**表示各组与TJR100553对照比较,P<0.01;*表示各组与TJR100553对照比较,P<0.1。Figure 4 shows the serum Lp(a) content of TJR100747, TJR100848 and TJR100553 mice on day 28. ** indicates that each group is compared with the TJR100553 control, P<0.01; * indicates that each group is compared with the TJR100553 control, P<0.1.
具体实施方式Detailed ways
以下结合实施例进一步描述本公开,但这些实施例并非限制本公开的范围。本公开实施例中未注明具体条件的实验方法,通常按照常规条件或按照原料或商品制造厂商所建议的条件。未注明具体来源的试剂,则该试剂可自任意分子生物学试剂的供应商以用于分子生物学应用的质量/纯度而获得。The present disclosure is further described below in conjunction with examples, but these examples do not limit the scope of the disclosure. Experimental methods without specifying specific conditions in the examples of this disclosure usually follow conventional conditions or conditions recommended by raw material or product manufacturers. If a specific source of reagent is not stated, the reagent can be obtained from any supplier of molecular biology reagents in a quality/purity suitable for molecular biology applications.
实施例Example
实施例1、靶向配体的合成Example 1. Synthesis of targeting ligands
实施例1.1制备NAG0052、L96Example 1.1 Preparation of NAG0052, L96
化合物NAG0024、NAG0026购买自天津药明康德新药开发有限公司。除非特别说明,以下实施例中所用的试剂均为市售商品。Compounds NAG0024 and NAG0026 were purchased from Tianjin WuXi AppTec New Drug Development Co., Ltd. Unless otherwise stated, the reagents used in the following examples are all commercially available products.
(1)化合物NAG0052的合成(1) Synthesis of compound NAG0052
起始原料化合物1采购自江苏倍达医药科技有限公司。

The starting material compound 1 was purchased from Jiangsu Beida Pharmaceutical Technology Co., Ltd.

NAG0052的具体制备过程如下:The specific preparation process of NAG0052 is as follows:
化合物2Compound 2
在0℃以及氮气保护下,向化合物1(12.3mL,101mmol)的THF(300mL)溶液中分批加入NaH(12.2g,304mmol,纯度60%)。该混合物在20℃搅拌1小时之后,再次冷却到0℃,接着向体系中逐滴加入苄溴(36.3mL,304mmol),并且在20℃搅拌12小时。将该反应液用H2O(100mL)淬灭后,用EtOAc(200mL×2)萃取。合并后的有机相用饱和食盐水(100mL)洗涤,Na2SO4干燥,过滤,浓缩得到的残留物经过硅胶柱层析色谱法分离后,得到目标化合物2(20.0g,51.8mmol,产率51%)。To a solution of compound 1 (12.3 mL, 101 mmol) in THF (300 mL) at 0° C. and nitrogen protection, NaH (12.2 g, 304 mmol, purity 60%) was added in portions. After the mixture was stirred at 20°C for 1 hour, it was cooled to 0°C again, then benzyl bromide (36.3 mL, 304 mmol) was added dropwise to the system, and stirred at 20°C for 12 hours. The reaction solution was quenched with H 2 O (100 mL), and then extracted with EtOAc (200 mL×2). The combined organic phases were washed with saturated brine (100 mL), dried over Na 2 SO 4 , filtered, and concentrated. The residue obtained was separated by silica gel column chromatography to obtain the target compound 2 (20.0 g, 51.8 mmol, yield 51%).
LCMS:tR=2.615and 2.820min in 30-90AB_7min_220&254_Shimadzu.lcm(Xtimate C18,3um,2.1*30mm),MS(ESI)m/z=351.2[M+Na]+LCMS: t R = 2.615and 2.820min in 30-90AB_7min_220&254_Shimadzu.lcm (Xtimate C18, 3um, 2.1*30mm), MS (ESI) m/z = 351.2[M+Na] + .
1H NMR:(400MHz,CDCl3)δppm 7.35-7.12(m,10H),5.06-4.95(m,1H), 4.51-4.39(m,4H),4.24-3.87(m,2H),3.50-3.40(m,2H),3.38-3.20(m,3H),2.20-1.91(m,2H)。 1 H NMR: (400MHz, CDCl 3 )δppm 7.35-7.12(m,10H),5.06-4.95(m,1H), 4.51-4.39(m,4H),4.24-3.87(m,2H),3.50-3.40(m,2H),3.38-3.20(m,3H),2.20-1.91(m,2H).
化合物3和化合物4Compound 3 and Compound 4
在20℃以及氮气保护下,向化合物2(13.0g,33.6mmol)的DCM(300mL)溶液中一次性加入TMSCN(13.5mL,101mmol),接着逐滴加入TMSOTf(9.14mL,50.5mmol)的DCM(30mL)溶液。该反应液在20℃搅拌15小时。反应结束之后用饱和NaHCO3水溶液(80mL)淬灭该体系,并且用DCM(150mL×2)萃取,合并后的有机相用饱和食盐水(80mL)洗涤,Na2SO4干燥,过滤以及浓缩后,通过硅胶柱层析色谱法分离,得到目标化合物3(3.30g,9.18mmol,产率27%)以及淡黄色油状液体化合物4(8.50g,9.18mmol,产率70%)。At 20°C and under nitrogen protection, TMSCN (13.5 mL, 101 mmol) was added in one go to a solution of compound 2 (13.0 g, 33.6 mmol) in DCM (300 mL), and then TMSOTf (9.14 mL, 50.5 mmol) in DCM was added dropwise. (30mL) solution. The reaction solution was stirred at 20°C for 15 hours. After the reaction, the system was quenched with saturated NaHCO 3 aqueous solution (80 mL), and extracted with DCM (150 mL × 2). The combined organic phases were washed with saturated brine (80 mL), dried over Na 2 SO 4 , filtered and concentrated. , separated by silica gel column chromatography, and obtained target compound 3 (3.30g, 9.18mmol, yield 27%) and light yellow oily liquid compound 4 (8.50g, 9.18mmol, yield 70%).
化合物3Compound 3
1H NMR:(400MHz,CDCl3)δppm 7.42-7.29(m,10H),4.81(t,J=7.8Hz,1H),4.65-4.49(m,4H),4.30-4.21(m,2H),3.65-3.57(m,1H),3.57-3.49(m,1H),2.49-2.40(m,2H)。 1 H NMR: (400MHz, CDCl 3 ) δppm 7.42-7.29 (m, 10H), 4.81 (t, J = 7.8Hz, 1H), 4.65-4.49 (m, 4H), 4.30-4.21 (m, 2H), 3.65-3.57(m,1H),3.57-3.49(m,1H),2.49-2.40(m,2H).
化合物4Compound 4
1H NMR:(400MHz,CDCl3)δppm 7.42-7.26(m,10H),4.93-4.87(m,1H),4.65-4.48(m,4H),4.43-4.38(m,1H),4.21-4.17(m,1H),3.79-3.70(m,1H),3.54(d,J=4.0Hz,1H),2.45-2.37(m,2H)。 1 H NMR: (400MHz, CDCl 3 ) δppm 7.42-7.26(m,10H),4.93-4.87(m,1H),4.65-4.48(m,4H),4.43-4.38(m,1H),4.21-4.17 (m,1H),3.79-3.70(m,1H),3.54(d,J=4.0Hz,1H),2.45-2.37(m,2H).
化合物5Compound 5
在0℃及氮气保护下将化合物4(3.00g,9.28mmol)的THF(15mL)溶液滴加到LiAlH4(0.79g,20.9mmol)的THF(15mL)溶液中,滴加完后,体系在0℃反应1小时。TLC(PE:EtOAc=3:1)监测到原料完全消失。向反应液中缓慢加入十水硫酸钠,加至不冒泡为止。之后将反应液过滤,滤饼用二氯甲烷(60mL)洗涤三次后,收集滤液旋干,得目标化合物5(3.00g,产率90%)。A solution of compound 4 (3.00g, 9.28mmol) in THF (15mL) was added dropwise to a solution of LiAlH 4 (0.79g, 20.9mmol) in THF (15mL) at 0°C under nitrogen protection. After the dropwise addition, the system was React at 0°C for 1 hour. TLC (PE:EtOAc=3:1) detected the complete disappearance of the starting material. Slowly add sodium sulfate decahydrate to the reaction solution until bubbling stops. Afterwards, the reaction solution was filtered, and the filter cake was washed three times with dichloromethane (60 mL). The filtrate was collected and spin-dried to obtain target compound 5 (3.00 g, yield 90%).
1H NMR:(400MHz,DMSO-d6)δppm 7.40-7.14(m,10H),4.54-4.38(m,4H),4.06-3.99(m,2H),3.91(q,J=6.4Hz,1H),3.48-3.37(m,2H),2.67-2.52(m,2H),2.21-2.18(m,1H),1.77-1.73(m,1H)。 1 H NMR: (400MHz, DMSO-d 6 ) δppm 7.40-7.14 (m, 10H), 4.54-4.38 (m, 4H), 4.06-3.99 (m, 2H), 3.91 (q, J=6.4Hz, 1H ),3.48-3.37(m,2H),2.67-2.52(m,2H),2.21-2.18(m,1H),1.77-1.73(m,1H).
化合物6Compound 6
在氮气保护下,将化合物5(3.00g,8.25mmol)溶于DCM(30mL),加入TEA(3.44mL,24.7mmol)和CbzCl(1.76mL,12.4mmol),20℃反应2小时。LCMS显示反应完成。将反应液加入二氯甲烷(30mL)和水(60mL)萃取。有机相用水(60mL×3)洗涤三次,无水硫酸钠干燥,浓缩用正向柱纯化(PE:EtOAc=1:1),得到目标化合物6(2.5g,产率90%)。Under nitrogen protection, compound 5 (3.00g, 8.25mmol) was dissolved in DCM (30mL), TEA (3.44mL, 24.7mmol) and CbzCl (1.76mL, 12.4mmol) were added, and the reaction was carried out at 20°C for 2 hours. LCMS showed the reaction was complete. Dichloromethane (30 mL) and water (60 mL) were added to the reaction liquid and extracted. The organic phase was washed three times with water (60 mL×3), dried over anhydrous sodium sulfate, concentrated and purified by forward column (PE:EtOAc=1:1) to obtain target compound 6 (2.5 g, yield 90%).
LCMS:tR=0.810min in 5-95AB_1min,MS(ESI)m/z=462.2[M+H]+LCMS: t R =0.810min in 5-95AB_1min, MS(ESI) m/z=462.2[M+H] + .
1H NMR:(400MHz,CDCl3)δppm 7.39-7.29(m,15H),5.35(s,1H),5.15-5.01(m,2H),4.72(d,J=6.0Hz,1H),4.54-4.40(m,3H),4.26(s,1H),4.23-4.18(m,1H), 4.11-4.04(m,1H),3.54-3.41(m,3H),3.37-3.25(m,1H),2.34-2.23(m,1H),1.85-1.79(m,1H)。 1 H NMR: (400MHz, CDCl 3 ) δppm 7.39-7.29 (m, 15H), 5.35 (s, 1H), 5.15-5.01 (m, 2H), 4.72 (d, J = 6.0Hz, 1H), 4.54- 4.40(m,3H),4.26(s,1H),4.23-4.18(m,1H), 4.11-4.04(m,1H),3.54-3.41(m,3H),3.37-3.25(m,1H),2.34-2.23(m,1H),1.85-1.79(m,1H).
化合物7Compound 7
在氮气保护下,将化合物6(2.00g,3.90mmol)溶于DCM(5mL),在-78℃加入BCl3的THF溶液(1M,27.3mL),反应1小时。TLC(DCM:MeOH=10:1)监测到原料完全消失。将反应液在-78℃下加入甲醇(20mL)淬灭,浓缩,用正向柱纯化(DCM:MeOH=10:1),得到目标化合物7(2.00g,产率60%)。Under nitrogen protection, compound 6 (2.00g, 3.90mmol) was dissolved in DCM (5mL), BCl 3 in THF solution (1M, 27.3mL) was added at -78°C, and the reaction was carried out for 1 hour. TLC (DCM:MeOH=10:1) detected the complete disappearance of the starting material. The reaction solution was quenched by adding methanol (20 mL) at -78°C, concentrated, and purified with a forward column (DCM:MeOH=10:1) to obtain target compound 7 (2.00 g, yield 60%).
1H NMR:(400MHz,CD3OD)δppm 7.41-7.23(m,5H),5.08(s,2H),4.25-4.07(m,2H),3.85-3.75(m,1H),3.63-3.56(m,1H),3.54-3.48(m,1H),3.30-3.27(m,2H),2.34-2.21(m,1H),1.71-1.64(m,1H)。 1 H NMR: (400MHz, CD 3 OD) δppm 7.41-7.23(m,5H),5.08(s,2H),4.25-4.07(m,2H),3.85-3.75(m,1H),3.63-3.56( m,1H),3.54-3.48(m,1H),3.30-3.27(m,2H),2.34-2.21(m,1H),1.71-1.64(m,1H).
化合物8Compound 8
在氮气保护下,将化合物7(0.50g,1.78mmol)溶于吡啶(5mL)中,在0℃下加入4A分子筛(500mg)和DMTrCl(0.66mL,2.13mmol),之后升温至20℃反应1.5小时。TLC(PE:EtOAc=2:1)监测到原料完全消失。将反应液加入乙酸乙酯(60mL)和水(60mL)萃取,有机相用水(60mL×3)洗涤三次后用无水硫酸钠干燥,浓缩,用正向柱纯化(PE:EtOAc=1:1),得到目标化合物8(800mg,产率90%)。Under nitrogen protection, compound 7 (0.50g, 1.78mmol) was dissolved in pyridine (5mL), 4A molecular sieve (500mg) and DMTrCl (0.66mL, 2.13mmol) were added at 0°C, and then the temperature was raised to 20°C for reaction 1.5 Hour. TLC (PE:EtOAc=2:1) detected the complete disappearance of the starting material. The reaction solution was extracted with ethyl acetate (60 mL) and water (60 mL). The organic phase was washed three times with water (60 mL × 3), dried over anhydrous sodium sulfate, concentrated, and purified with a forward column (PE:EtOAc=1:1 ) to obtain target compound 8 (800 mg, yield 90%).
1H NMR:(400MHz,CDCl3)δppm 7.44(d,J=7.6Hz,2H),7.37-7.23(m,11H),7.22-7.15(m,1H),6.84(d,J=8.8Hz,4H),5.09(s,2H),4.31-4.17(m,2H),4.02-3.91(m,1H),3.84-3.73(m,6H),3.33(s,1H),3.28(s,1H),3.19-3.01(m,2H),2.34-2.25(m,1H),1.70-1.62(m,1H)。 1 H NMR: (400MHz, CDCl 3 ) δppm 7.44 (d, J = 7.6Hz, 2H), 7.37-7.23 (m, 11H), 7.22-7.15 (m, 1H), 6.84 (d, J = 8.8Hz, 4H),5.09(s,2H),4.31-4.17(m,2H),4.02-3.91(m,1H),3.84-3.73(m,6H),3.33(s,1H),3.28(s,1H) ,3.19-3.01(m,2H),2.34-2.25(m,1H),1.70-1.62(m,1H).
化合物9Compound 9
将化合物8(800mg,1.234mmol)溶于EtOAc(5mL),加入Pd/C 10%(800mg,7.517mmol),反应在H2条件(15Psi),20℃反应1小时。LCMS显示反应已经完成。反应液过滤,滤饼用二氯甲烷(100mL)和甲醇(100mL)洗涤三次,浓缩,经过反相柱色谱法分离得到化合物9(300mg,54%)。Compound 8 (800 mg, 1.234 mmol) was dissolved in EtOAc (5 mL), Pd/C 10% (800 mg, 7.517 mmol) was added, and the reaction was carried out under H 2 conditions (15 Psi) and 20°C for 1 hour. LCMS showed the reaction was complete. The reaction solution was filtered, and the filter cake was washed three times with dichloromethane (100 mL) and methanol (100 mL), concentrated, and separated by reverse-phase column chromatography to obtain compound 9 (300 mg, 54%).
LCMS:tR=2.586min in 10-80CD_3min MS(ESI)m/z=450.2[M+H]+LCMS: t R =2.586min in 10-80CD_3min MS(ESI)m/z=450.2[M+H] + .
化合物11Compound 11
将化合物10(435mg,1.780mmol)溶于DCM(10mL),加入DIEA(0.441mL,2.67mmol)和HATU(677mg,1.78mmol)后,再加入化合物9(400mg,0.890mmol),20℃反应1小时。TLC(DCM:MeOH=10:1)监测反应完成。将反应液加入二氯甲烷(60mL)和水(60mL)萃取,有机相用水(60mL×3)洗涤三次,无水硫酸钠干燥,浓缩用正向柱纯化(PE:EtOAc=0:1过柱,在100%处出产品峰),得到目标化合物11(600mg,产率90%)。Dissolve compound 10 (435mg, 1.780mmol) in DCM (10mL), add DIEA (0.441mL, 2.67mmol) and HATU (677mg, 1.78mmol), then add compound 9 (400mg, 0.890mmol), and react at 20°C 1 Hour. TLC (DCM:MeOH=10:1) monitored the reaction completion. The reaction solution was extracted with dichloromethane (60 mL) and water (60 mL). The organic phase was washed three times with water (60 mL × 3), dried over anhydrous sodium sulfate, concentrated and purified by forward column (PE:EtOAc=0:1). , the product peak appeared at 100%), and the target compound 11 (600 mg, yield 90%) was obtained.
LCMS:tR=2.745min in 30-90CD_3min,MS(ESI)m/z=698.4[M+Na]+LCMS: t R =2.745min in 30-90CD_3min, MS(ESI) m/z=698.4[M+Na] + .
1H NMR:(400MHz,CD3OD)δppm 7.46-7.38(m,2H),7.35-7.24(m,6H),7.22-7.16(m,1H),6.90-6.78(m,4H),4.29-4.21(m,2H),4.02-3.95(m,1H),3.77(s, 6H),3.66-3.62(m,3H),3.41(s,1H),3.18-3.04(m,2H),2.36-2.17(m,5H),1.71-1.50(m,5H),1.39-1.25(m,14H)。 1 H NMR: (400MHz, CD 3 OD) δppm 7.46-7.38(m,2H),7.35-7.24(m,6H),7.22-7.16(m,1H),6.90-6.78(m,4H),4.29- 4.21(m,2H),4.02-3.95(m,1H),3.77(s, 6H),3.66-3.62(m,3H),3.41(s,1H),3.18-3.04(m,2H),2.36-2.17(m,5H),1.71-1.50(m,5H),1.39-1.25( m,14H).
化合物12Compound 12
将化合物11(600mg,0.799mmol)溶于THF(3mL)和H2O(1mL),加入LiOH.H2O(134mg,3.20mmol),20℃反应12小时。TLC(DCM:MeOH=10:1)显示反应完成。将反应液旋干,用水(5mL)和甲醇(5mL)溶解,用反向柱纯化(H2O:CH3CN=1:1,在35%左右出峰),得到目标化合物12(460mg,产率100%,锂盐)。Compound 11 (600 mg, 0.799 mmol) was dissolved in THF (3 mL) and H 2 O (1 mL), LiOH.H 2 O (134 mg, 3.20 mmol) was added, and the reaction was carried out at 20°C for 12 hours. TLC (DCM:MeOH=10:1) showed the reaction was complete. Spin the reaction solution to dryness, dissolve it in water (5 mL) and methanol (5 mL), and purify it with a reverse column (H 2 O: CH 3 CN = 1:1, peak at about 35%) to obtain target compound 12 (460 mg, Yield 100%, lithium salt).
LCMS:tR=1.346min in 10-80CD_3min,MS(ESI)m/z=684.3[M+Na]+LCMS: t R =1.346min in 10-80CD_3min, MS(ESI) m/z=684.3[M+Na] + .
HPLC:tR=1.879min in 10-80CD_6min。HPLC: t R =1.879min in 10-80CD_6min.
1H NMR:(400MHz,CD3OD)δppm 7.47-7.39(m,2H),7.35-7.24(m,6H),7.22-7.15(m,1H),6.91-6.79(m,4H),4.31-4.18(m,2H),4.02-3.95(m,1H),3.78(s,6H),3.44-3.33(m,2H),3.18-3.04(m,2H),2.35-2.27(m,1H),2.24-2.10(m,4H),1.70-1.51(m,5H),1.31-1.23(m,12H)。 1 H NMR: (400MHz, CD 3 OD) δppm 7.47-7.39(m,2H),7.35-7.24(m,6H),7.22-7.15(m,1H),6.91-6.79(m,4H),4.31- 4.18(m,2H),4.02-3.95(m,1H),3.78(s,6H),3.44-3.33(m,2H),3.18-3.04(m,2H),2.35-2.27(m,1H), 2.24-2.10(m,4H),1.70-1.51(m,5H),1.31-1.23(m,12H).
化合物13Compound 13
室温环境,氮气保护下,将化合物NAG0024(271mg,0.151mmol)溶解于无水THF(2mL)和无水DMF(4mL),加入3A分子筛,再依次加入化合物12(100mg,0.151mmol),HOBt(25mg,0.181mmol),DCC(38mg,0.181mmol)和DIEA(39mg,0.302mmol)。反应液45℃反应16h.LC-MS显示反应完全后,加水淬灭,过滤。滤液浓缩后,经C18反相柱色谱法纯化(H2O/MeCN),得到化合物13(210mg,产率57%)。Dissolve compound NAG0024 (271 mg, 0.151 mmol) in anhydrous THF (2 mL) and anhydrous DMF (4 mL) at room temperature under nitrogen protection, add 3A molecular sieve, and then add compound 12 (100 mg, 0.151 mmol), HOBt ( 25mg, 0.181mmol), DCC (38mg, 0.181mmol) and DIEA (39mg, 0.302mmol). The reaction solution was reacted at 45°C for 16 hours. After LC-MS showed that the reaction was complete, water was added to quench and filtered. After the filtrate was concentrated, it was purified by C18 reverse-phase column chromatography (H 2 O/MeCN) to obtain compound 13 (210 mg, yield 57%).
化合物NAG0052Compound NAG0052
室温环境下,化合物13(230mg,0.094mmol)溶于吡啶(5mL),加入分子筛,加入DMAP(12mg,0.283mmol),丁二酸酐(28mg,0.283mmol)。氮气保护,50℃搅拌16小时。LCMS检测反应完全,过滤旋干。过C18反相柱色谱法纯化后,由制备HPLC(乙腈/水,比例从0%乙腈梯度洗脱到100%乙腈)二次纯化,得到目标化合物NAG0052(123mg,0.048mmol,产率51%)。At room temperature, compound 13 (230 mg, 0.094 mmol) was dissolved in pyridine (5 mL), molecular sieves were added, DMAP (12 mg, 0.283 mmol), and succinic anhydride (28 mg, 0.283 mmol) were added. Under nitrogen protection, stir at 50°C for 16 hours. LCMS detects that the reaction is complete, filter and spin dry. After purification by C18 reversed-phase column chromatography, and secondary purification by preparative HPLC (acetonitrile/water, gradient elution ratio from 0% acetonitrile to 100% acetonitrile), the target compound NAG0052 (123 mg, 0.048 mmol, yield 51%) was obtained. .
MS(ESI)m/z=2535.3[M-1]-,理论:2536.2。MS(ESI)m/z=2535.3[M-1] - , theory: 2536.2.
1H NMR(400MHz,乙腈-d3)δ7.48-7.43(m,2H),7.37-7.12(m,11H),7.00-6.85(m,10H),6.66(s,1H),5.31(dd,J=3.4,1.1Hz,3H),5.20-5.13(m,1H),5.05(dd,J=11.3,3.4Hz,3H),4.56(d,J=8.5Hz,3H),4.30(dd,J=7.7,5.3Hz,1H),4.18-3.93(m,14H),3.79(s,10H),3.65(q,J=4.7,3.6Hz,13H),3.56-3.07(m,24H),2.56(s,6H),2.37(t,J=5.8Hz,10H),2.17(t,J=7.5Hz,9H),2.02-1.96(m,20H),1.88(s,8H),1.82-1.73(m,2H),1.60(dt,J=15.0,7.3Hz,16H),1.27(s,13H)。 1 H NMR (400MHz, acetonitrile-d 3 ) δ7.48-7.43(m,2H),7.37-7.12(m,11H),7.00-6.85(m,10H),6.66(s,1H),5.31(dd ,J=3.4,1.1Hz,3H),5.20-5.13(m,1H),5.05(dd,J=11.3,3.4Hz,3H),4.56(d,J=8.5Hz,3H),4.30(dd, J=7.7,5.3Hz,1H),4.18-3.93(m,14H),3.79(s,10H),3.65(q,J=4.7,3.6Hz,13H),3.56-3.07(m,24H),2.56 (s,6H),2.37(t,J=5.8Hz,10H),2.17(t,J=7.5Hz,9H),2.02-1.96(m,20H),1.88(s,8H),1.82-1.73( m, 2H), 1.60 (dt, J = 15.0, 7.3Hz, 16H), 1.27 (s, 13H).
L96的合成
Synthesis of L96
按照专利申请WO2014025805A1记载的方法制备获得如上结构式所示的L96。L96 shown in the above structural formula was prepared according to the method described in patent application WO2014025805A1.
实施例1.2含有NAG0052的siRNA缀合物的合成Example 1.2 Synthesis of siRNA conjugates containing NAG0052
1、自制带有载体的树脂1. Homemade resin with carrier
将含有羧酸基团的化合物NAG0052(157mg,0.062mmol)溶于无水DMF(3mL),待底物完全溶解后,依次加入无水乙腈(4mL)、DIEA(0.03mL,0.154mmol,2.5eq)和HBTU(35mg,0.093mmol,1.5eq)。反应液混合均匀后,再加入大孔胺甲基树脂(476mg,空白载量为0.41mmol/g,目标载量为0.1mmol/g)。将反应液放入摇床上(温度:25℃,转速:200rpm)振摇过夜。反应液过滤,滤饼依次用DCM、无水乙腈洗涤,收集固体,真空干燥过夜。Dissolve the compound NAG0052 (157mg, 0.062mmol) containing a carboxylic acid group in anhydrous DMF (3mL). After the substrate is completely dissolved, add anhydrous acetonitrile (4mL) and DIEA (0.03mL, 0.154mmol, 2.5eq) in sequence. ) and HBTU (35mg, 0.093mmol, 1.5eq). After the reaction solution is mixed evenly, macroporous amine methyl resin (476 mg, blank loading is 0.41 mmol/g, target loading is 0.1 mmol/g) is added. Place the reaction solution on a shaker (temperature: 25°C, rotation speed: 200 rpm) and shake overnight. The reaction solution was filtered, and the filter cake was washed with DCM and anhydrous acetonitrile in sequence. The solids were collected and dried under vacuum overnight.
将上步固体分散于无水乙腈(5mL),依次加入吡啶(0.18mL)、DMAP(3mg)、NMI(0.12mL)和CapB1(2.68mL)。将反应液放入摇床上(温度:25℃,转速:200rpm)振摇2h。反应液过滤,滤饼用无水乙腈洗涤,收集固体,真空干燥过夜,得到带有载体的树脂。载量经过测定为0.1mmol/g。Disperse the solid from the previous step in anhydrous acetonitrile (5 mL), and add pyridine (0.18 mL), DMAP (3 mg), NMI (0.12 mL) and CapB1 (2.68 mL) in sequence. Place the reaction solution on a shaker (temperature: 25°C, rotation speed: 200 rpm) and shake for 2 hours. The reaction solution was filtered, and the filter cake was washed with anhydrous acetonitrile. The solid was collected and dried under vacuum overnight to obtain a resin with a carrier. The loading capacity was determined to be 0.1mmol/g.
2、对于已经连接在树脂上的NAG0052,使用该树脂作为起始,按照核苷酸排布顺序自3’-5’方向逐一连接核苷单体。每连接一个核苷单体都包括脱保护、偶联、盖帽、氧化或硫化四步反应,操作为本领域常规。化合物NAG0052经过固相合成连接到序列上,再经过胺解后,NAG0052结构脱去一部分官能团成为NAG0052’。2. For NAG0052 that has been connected to the resin, use the resin as a starting point and connect the nucleoside monomers one by one from the 3’-5’ direction in the order of nucleotide arrangement. Each connection of a nucleoside monomer includes four steps of deprotection, coupling, capping, oxidation or sulfation, and the operations are routine in the art. Compound NAG0052 is connected to the sequence through solid-phase synthesis, and after aminolysis, part of the functional groups of the NAG0052 structure is removed to become NAG0052’.
制得的siRNA缀合物具有表1和表2中所示的有义链和反义链。The prepared siRNA conjugates had the sense strand and antisense strand shown in Table 1 and Table 2.
表1、siRNA缀合物列表
Table 1. List of siRNA conjugates
表2、有义链和反义链的核酸序列

Table 2. Nucleic acid sequences of sense strand and antisense strand

表3、缀合物的结构
Table 3. Structure of conjugates
其中,缀合物TRD002218作为参比阳性化合物,Z表示siRNA。Among them, conjugate TRD002218 is used as the reference positive compound, and Z represents siRNA.
实施例2、siRNA缀合物在体内对靶基因mRNA表达量的抑制Example 2. Inhibition of target gene mRNA expression by siRNA conjugates in vivo
本实验考察本公开的缀合不同结构的siRNA缀合物在体内对靶基因mRNA表达量的抑制效率。This experiment examines the inhibition efficiency of the siRNA conjugates of the present disclosure conjugated with different structures on the expression of target gene mRNA in vivo.
将雄性6-8周龄C57BL/6小鼠随机分组,每组共6只,每个时间点各3只,分别向每组小鼠给予本公开的缀合物TRD007205、参比阳性核酸配体缀合物TRD002218以及PBS。Male 6-8 week old C57BL/6 mice were randomly divided into groups, with 6 mice in each group and 3 mice at each time point. The conjugate TRD007205 and the reference positive nucleic acid ligand of the present disclosure were administered to each group of mice respectively. Conjugate TRD002218 and PBS.
所有动物依据体重算给药量,生理盐水溶解药物后,采用皮下注射方式单次给药,siRNA缀合物给药剂量(以siRNA的量计)为1mg/kg,给药体积为5mL/kg。给药7天、28天后处死小鼠,收集肝脏,用RNA later(Sigma Aldrich公司)保存;随后用组织匀浆仪匀浆肝组织,再用组织RNA提取试剂盒(凡知医疗科技, FG0412)根据操作说明书标注的操作步骤提取得到肝组织总RNA。将总RNA反转录成cDNA并采用实时荧光定量PCR方法检测肝组织中的TTR mRNA的表达量。在该荧光定量PCR法中,以甘油醛3-磷酸脫氫酶(GAPDH)基因作为内参基因,使用针对TTR和GAPDH的Taqman探针引物分别检测TTR和GAPDH的mRNA表达量。The dosage of all animals was calculated based on body weight. After dissolving the drug in physiological saline, a single dose was administered by subcutaneous injection. The dosage of siRNA conjugate (based on the amount of siRNA) was 1 mg/kg, and the dosage volume was 5 mL/kg. . The mice were sacrificed 7 days and 28 days after administration, and the livers were collected and preserved with RNA later (Sigma Aldrich Company); then the liver tissue was homogenized with a tissue homogenizer, and then tissue RNA extraction kit (Fanzhi Medical Technology, FG0412) Total RNA from liver tissue was extracted according to the operating procedures marked in the operating instructions. Total RNA was reverse transcribed into cDNA and real-time fluorescence quantitative PCR method was used to detect the expression of TTR mRNA in liver tissue. In this fluorescence quantitative PCR method, the glyceraldehyde 3-phosphate dehydrogenase (GAPDH) gene was used as the internal reference gene, and Taqman probe primers for TTR and GAPDH were used to detect the mRNA expression levels of TTR and GAPDH respectively.
表4小鼠体内实验化合物分组信息
Table 4 Grouping information of experimental compounds in mice
TTR mRNA表达量按照如下公式计算:
TTR mRNA表达量=[(测试组TTR mRNA表达量/测试组GAPDH mRNA表
达量)/(对照组TTR mRNA表达量/对照组GAPDH mRNA表达量)]x 100%。
TTR mRNA expression is calculated according to the following formula:
TTR mRNA expression amount = [(TTR mRNA expression amount in test group/GAPDH mRNA expression amount in test group)/(TTR mRNA expression amount in control group/GAPDH mRNA expression amount in control group)] x 100%.
给药7天、28天后,本公开的缀合不同结构的siRNA缀合物在体内对靶基因mRNA表达量的抑制效率分别见图1和图2。After 7 days and 28 days of administration, the inhibition efficiency of the siRNA conjugates of the present disclosure conjugated with different structures on target gene mRNA expression in vivo is shown in Figure 1 and Figure 2 respectively.
由图1的结果可知,缀合物TRD007205在给药后7天对于TTR mRNA的表达抑制具有良好的效果,说明其能够介导更高效的递送效率。由图2可知,给药28天后,TRD007205对靶基因mRNA表达量的抑制作用优于TRD002218。因此,配体NAG0052具有显著优势效果。As can be seen from the results in Figure 1, the conjugate TRD007205 has a good effect on inhibiting the expression of TTR mRNA 7 days after administration, indicating that it can mediate more efficient delivery efficiency. As can be seen from Figure 2, after 28 days of administration, TRD007205 has a better inhibitory effect on target gene mRNA expression than TRD002218. Therefore, the ligand NAG0052 has significant advantageous effects.
实施例3、人LPA siRNAExample 3, human LPA siRNA
1)siRNA设计,以人LPA(NM_005577.3)作为靶基因,以满足活性siRNA的一般规则设计19/21nt的siRNA。未经修饰的正义链及反义链序列详见表5、表6。1) siRNA design, using human LPA (NM_005577.3) as the target gene to design 19/21nt siRNA to meet the general rules of active siRNA. The unmodified sense strand and antisense strand sequences are detailed in Table 5 and Table 6.
表5、人LPA siRNA的未修饰的正义链、反义链
Table 5. Unmodified sense strand and antisense strand of human LPA siRNA
表6、人LPA siRNA的未修饰的正义链、反义链(对照组)

Table 6. Unmodified sense strand and antisense strand of human LPA siRNA (control group)

实施例4、siRNA psiCHECK 9个浓度点在靶活性Example 4. Target activity of siRNA psiCHECK at 9 concentration points
在HEK293A细胞中采用9个浓度梯度对siRNA缀合物进行体外分子水平模拟在靶活性筛选。In HEK293A cells, siRNA conjugates were screened for in vitro molecular level simulation and target activity using 9 concentration gradients.
HEK293A细胞培养于含10%胎牛血清的DMEM高糖培养基中,在37℃,5%CO2条件下培养。转染前24h,将HEK293A细胞接种于96孔板,接种密度为每孔8×103个细胞,每孔100μL培养基。HEK293A cells were cultured in DMEM high-glucose medium containing 10% fetal calf serum at 37°C and 5% CO2 . 24 h before transfection, HEK293A cells were seeded in a 96-well plate at a seeding density of 8 × 10 3 cells per well and 100 μL culture medium per well.
按照说明书,使用Lipofectamine2000(ThermoFisher,11668019)对细胞共转染siRNA及对应质粒,每孔使用0.3μL Lipofectamine2000。质粒转染量为40ng每孔。对于在靶序列质粒,siRNA共设置9个浓度点,最高浓度点终浓度为20nM,3倍梯度稀释,9个浓度点为20nM、6.666666667nM、2.222222222nM、0.740740741nM、0.24691358nM、0.082304527nM、0.027434842nM、0.009144947nM、0.003048316nM。转染后24h,采用Dual-Luciferase Reporter Assay System(Promega,E2940)检测在靶水平。According to the instructions, use Lipofectamine2000 (ThermoFisher, 11668019) to co-transfect cells with siRNA and corresponding plasmids, using 0.3 μL Lipofectamine2000 in each well. The transfection amount of plasmid is 40ng per well. For the plasmid in the target sequence, SiRNA has a total of 9 concentration points, the maximum concentration point concentration is 20nm, 3 times gradient dilution, 9 concentration points are 20nm, 6.666666667nm, 2.2222222222nm, 0.740740741Nm, 0.24691358nm, 0.08230444 527nm, 0.027434842 nM, 0.009144947nM, 0.003048316nM. 24h after transfection, the Dual-Luciferase Reporter Assay System (Promega, E2940) was used to detect the target level.
在该实施例中,使用了正义链和反义链均未经修饰的TJR100373(包含SEQ ID NO:1所示的正义链和SEQ ID NO:2所示的反义链)进行了测试。In this example, TJR100373 (including the sense strand shown in SEQ ID NO: 1 and the antisense strand shown in SEQ ID NO: 2) in which both the sense and antisense strands were unmodified was used for testing.
结果表明,未修饰的siRNA(裸序列)TJR100373与相似未修饰的siRNA序列(TJR100374-TJR100380)相比均具有显著活性。The results showed that unmodified siRNA (naked sequence) TJR100373 had significant activity compared with similar unmodified siRNA sequences (TJR100374-TJR100380).
表7、siRNA在psi-Check系统9个浓度点活性结果

Table 7. siRNA activity results at 9 concentration points of psi-Check system

实施例5、siRNA对人原代肝细胞(PHH)中人LPA的抑制-7个浓度点抑制活性Example 5. Inhibitory activity of siRNA on human LPA in primary human hepatocytes (PHH) at 7 concentration points
在人原代肝细胞(PHH)中采用7个浓度梯度对siRNA序列进行PHH活性筛选。各个siRNA样品转染起始终浓度为20nM,5倍梯度稀释和7个浓度点。The siRNA sequences were screened for PHH activity in primary human hepatocytes (PHH) using 7 concentration gradients. Each siRNA sample was always at a concentration of 20 nM from the time of transfection, with 5-fold gradient dilution and 7 concentration points.
PHH冻存于液氮中,转染前24h,将人原代肝细胞(PHH)复苏后接种于96孔板,接种密度为每孔3×104个细胞,每孔80μL培养基。PHH was cryopreserved in liquid nitrogen. 24 hours before transfection, primary human hepatocytes (PHH) were recovered and seeded in a 96-well plate at a seeding density of 3 × 10 4 cells per well and 80 μL culture medium per well.
参照产品说明手册,使用Lipofectamine RNAi MAX(ThermoFisher,13778150)转染siRNA,siRNA转染的梯度终浓度为20nM、4nM、0.8nM、0.16nM、0.032nM、0.0064nM和0.00128nM。在处理24小时后,使用高通量细胞RNA提取试剂盒进行细胞总RNA提取、RNA逆转录实验和定量实时PCR检测,测定人LPA的mRNA水平,根据GAPDH内参基因水平对人LPA的mRNA水平进行校正。According to the product instruction manual, Lipofectamine RNAi MAX (ThermoFisher, 13778150) was used to transfect siRNA. The final gradient concentrations of siRNA transfection were 20nM, 4nM, 0.8nM, 0.16nM, 0.032nM, 0.0064nM and 0.00128nM. After 24 hours of treatment, a high-throughput cell RNA extraction kit was used to extract total cellular RNA, RNA reverse transcription experiments and quantitative real-time PCR detection to determine the mRNA level of human LPA. The mRNA level of human LPA was measured based on the GAPDH internal reference gene level. Correction.
其中,在定量实时PCR检测时,采用的是探针Q-PCR检测实验,其引物信息如表8和9所示。Among them, in the quantitative real-time PCR detection, the probe Q-PCR detection experiment was used, and the primer information is shown in Tables 8 and 9.
Taqman探针Q-PCR检测实验完毕后,按照系统自动设定的阈值获取相应的Ct值,可以通过Ct值比较,相对定量某个基因的表达。比较Ct指的是通过与内参基因Ct值之间的差值来计算基因表达差异,也称之是2-△△Ct,△△Ct=[(Ct实验组目的基因-Ct实验组内参)-(Ct对照组目的基因-Ct对照组内参)]。抑制率(%)=(1-目的基因表达剩余量)×100%。After the Taqman probe Q-PCR detection experiment is completed, the corresponding Ct value is obtained according to the threshold automatically set by the system. The expression of a certain gene can be relatively quantified by comparing the Ct value. Comparing Ct refers to calculating the gene expression difference through the difference between the Ct value of the internal reference gene, also known as 2- △△Ct , △△Ct=[(Ct experimental group target gene-Ct experimental group internal reference)- (Ct control group target gene-Ct control group internal reference)]. Inhibition rate (%) = (1 - remaining amount of target gene expression) × 100%.
结果以相对于经过对照siRNA处理的细胞的人LPA mRNA表达剩余百分比来表示。抑制率的IC50结果见表10。Results are expressed as percent remaining human LPA mRNA expression relative to control siRNA-treated cells. The IC 50 results of inhibition rates are shown in Table 10.
结果表明,TJR100373具有显著优势活性。The results show that TJR100373 has significant advantageous activity.
表8、Taqman LPA探针引物信息表

Table 8. Taqman LPA probe primer information table

表9、Taqman GAPDH探针引物信息表
Table 9. Taqman GAPDH probe primer information table
表10、siRNA对人原代肝细胞(PHH)中人LPA的多剂量抑制活性
Table 10. Multiple-dose inhibitory activity of siRNA on human LPA in primary human hepatocytes (PHH)
实施例6、氘代5’末端化学修饰亚磷酰胺合成
Example 6. Synthesis of deuterated 5' terminal chemically modified phosphoramidite
第一步first step
1-((6aR,8R,9R,9aS)-9-羟基-2,2,4,4-四异丙基四氢-6H-呋喃并[3,2-f][1,3,5,2,4]三氧杂二硅杂环辛烷-8-基)嘧啶-2,4(1H,3H)-二酮A1-2
1-((6aR,8R,9R,9aS)-9-hydroxy-2,2,4,4-tetraisopropyltetrahydro-6H-furo[3,2-f][1,3,5, 2,4]trioxadisilacyclooctan-8-yl)pyrimidine-2,4(1H,3H)-dione A1-2
在氮气氛下,将化合物A1-1(100g,409mmol)溶于吡啶(1000mL)中,在0℃加入1,3-二氯-1,1,3,3-四异丙基二甲硅氧醚(TIPDSiCl2)(135.6g,430.0mmol),20℃反应18小时。将反应液加入乙酸乙酯(1500mL)和水(1000mL)萃取,有机相用饱和食盐水(1000mL x 3)洗涤三次后用无水硫酸钠干燥,浓缩,用柱层析色谱法纯化(石油醚:乙酸乙酯=2:1),得到化合物A1-2(185g,380mmol,产率92.8%)。Under a nitrogen atmosphere, compound A1-1 (100g, 409mmol) was dissolved in pyridine (1000mL), and 1,3-dichloro-1,1,3,3-tetraisopropyldimethylsiloxane was added at 0°C. Ether (TIPDSiCl 2 ) (135.6g, 430.0mmol), reacted at 20°C for 18 hours. The reaction solution was added to ethyl acetate (1500mL) and water (1000mL) for extraction. The organic phase was washed three times with saturated brine (1000mL x 3), dried over anhydrous sodium sulfate, concentrated, and purified by column chromatography (petroleum ether). :ethyl acetate=2:1) to obtain compound A1-2 (185g, 380mmol, yield 92.8%).
第二步Step 2
3-((苄氧基)甲基)-1-((6aR,8R,9R,9aS)-9-羟基-2,2,4,4-四异丙基四氢-6H-呋喃并[3,2-][1,3,5,2,4]三氧杂二硅杂环辛烷-8-基)嘧啶-2,4(1H,3H)-二酮A1-3
3-((benzyloxy)methyl)-1-((6aR,8R,9R,9aS)-9-hydroxy-2,2,4,4-tetraisopropyltetrahydro-6H-furo[3 ,2-][1,3,5,2,4]trioxadisilacyclooctane-8-yl)pyrimidine-2,4(1H,3H)-dione A1-3
将化合物A1-2(185g,380.1mmol)溶于N,N-二甲基甲酰胺(1850mL)后,加入苄基氯甲基醚(BOMCl)(89.29g,570.1mmol)和1,8-二氮杂二环十一碳-7-烯(DBU)(115.7g,760.2mmol),20℃反应3小时。将反应液加入乙酸乙酯(3000mL)和水(3000mL)萃取,有机相用饱和食盐水(2000mL x 3)洗涤三次后用无水硫酸钠干燥,浓缩,用柱层析色谱法纯化(石油醚:乙酸乙酯=3:1),得到化合物A1-3(目标化合物,172g,275.6mmol,产率72.5%)。After compound A1-2 (185g, 380.1mmol) was dissolved in N,N-dimethylformamide (1850mL), benzyl chloromethyl ether (BOMCl) (89.29g, 570.1mmol) and 1,8-dimethylformamide were added. Azabicycloundec-7-ene (DBU) (115.7g, 760.2mmol), reacted at 20°C for 3 hours. The reaction solution was extracted with ethyl acetate (3000mL) and water (3000mL). The organic phase was washed three times with saturated brine (2000mL x 3), dried over anhydrous sodium sulfate, concentrated, and purified by column chromatography (petroleum ether). : ethyl acetate = 3:1) to obtain compound A1-3 (target compound, 172 g, 275.6 mmol, yield 72.5%).
第三步third step
3-((苄氧基)甲基)-1-((6aR,8R,9R,9aR)-2,2,4,4-四异丙基-9-(甲氧基-d3)四氢-6H-呋喃并[3,2-][1,3,5,2,4]三氧杂二硅杂环辛烷-8-基)嘧啶-2,4(1H,3H)-二酮A1-4
3-((benzyloxy)methyl)-1-((6aR,8R,9R,9aR)-2,2,4,4-tetraisopropyl-9-(methoxy-d3)tetrahydro- 6H-Furo[3,2-][1,3,5,2,4]trioxadisilacyclooctan-8-yl)pyrimidine-2,4(1H,3H)-dione A1- 4
将化合物A1-3(150g,247.2mmol)溶于乙腈(300mL)中,加入CD3I(107.5g,741.5mmol)和氧化银(114.5g,494.3mmol),55℃反应24小时。将反应液过滤,减压浓缩,得到粗品化合物A1-4(目标化合物,125g,200.3mmol,产率81%)。Compound A1-3 (150g, 247.2mmol) was dissolved in acetonitrile (300mL), CD 3 I (107.5g, 741.5mmol) and silver oxide (114.5g, 494.3mmol) were added, and the reaction was carried out at 55°C for 24 hours. The reaction solution was filtered and concentrated under reduced pressure to obtain crude compound A1-4 (target compound, 125 g, 200.3 mmol, yield 81%).
第四步the fourth step
3-((苄氧基)甲基)-1-((2R,3R,4R,5R)-4-羟基-5-(羟甲基)-3-(甲氧基-d3)四氢呋喃-2-基)嘧啶-2,4(1H,3H)-二酮A1-5
3-((benzyloxy)methyl)-1-((2R,3R,4R,5R)-4-hydroxy-5-(hydroxymethyl)-3-(methoxy-d3)tetrahydrofuran-2- base)pyrimidine-2,4(1H,3H)-dione A1-5
将化合物A1-4(125g,200mmol)溶于四氢呋喃(1250mL)后,加入吡啶氟化氢(158.8g,1.60mol),25℃反应18小时。将反应液加入乙酸乙酯(1000mL)和水(1000mL)萃取,有机相用饱和食盐水(1000mL)洗涤一次后用无水硫酸钠干燥,过滤,减压浓缩,用柱层析色谱法纯化(二氯甲烷:甲醇=20:1),得到化合物A1-5(目标化合物,59g,154.7mmol,产率77%)。After compound A1-4 (125g, 200mmol) was dissolved in tetrahydrofuran (1250mL), pyridine hydrogen fluoride (158.8g, 1.60mol) was added and the reaction was carried out at 25°C for 18 hours. The reaction solution was extracted with ethyl acetate (1000 mL) and water (1000 mL). The organic phase was washed once with saturated brine (1000 mL), dried over anhydrous sodium sulfate, filtered, concentrated under reduced pressure, and purified by column chromatography ( Dichloromethane: methanol = 20:1) to obtain compound A1-5 (target compound, 59 g, 154.7 mmol, yield 77%).
第五步the fifth step
(2R,3R,4R,5R)-5-(3-((苄氧基)甲基)-2,4-二氧代-3,4-二氢嘧啶-1(2H)-基)-2-(((叔丁基二甲基硅)氧基)甲基)-4-(甲氧基-d3)四氢呋喃-3-基苯甲酸酯A1-6
(2R,3R,4R,5R)-5-(3-((benzyloxy)methyl)-2,4-dioxo-3,4-dihydropyrimidine-1(2H)-yl)-2 -(((tert-butyldimethylsilyl)oxy)methyl)-4-(methoxy-d3)tetrahydrofuran-3-yl benzoate A1-6
将化合物A1-5(59g,154.7mmol)溶于吡啶(590mL)后,加入叔丁基二甲基氯硅烷(TBSCl)(93.2g,618mmol),该反应在25℃反应18小时。然后加入苯甲酰 氯(32.62g,232.0mmol),在25℃反应3小时。将反应液加入乙酸乙酯(1000mL)和水(1000mL)萃取,有机相用饱和食盐水(1000mL x2)洗涤两次后用无水硫酸镁干燥,浓缩,用柱层析色谱法纯化(石油醚:乙酸乙酯=5:1),得到化合物A1-6(目标化合物,60.0g,100.3mmol,产率64.6%)。After compound A1-5 (59g, 154.7mmol) was dissolved in pyridine (590mL), tert-butyldimethylsilyl chloride (TBSCl) (93.2g, 618mmol) was added, and the reaction was carried out at 25°C for 18 hours. Then add benzoyl Chlorine (32.62g, 232.0mmol), react at 25°C for 3 hours. The reaction solution was extracted with ethyl acetate (1000mL) and water (1000mL). The organic phase was washed twice with saturated brine (1000mL x 2), dried over anhydrous magnesium sulfate, concentrated, and purified by column chromatography (petroleum ether). : ethyl acetate = 5:1) to obtain compound A1-6 (target compound, 60.0 g, 100.3 mmol, yield 64.6%).
第六步Step 6
(2R,3R,4R,5R)-5-(3-((苄氧基)甲基)-2,4-二氧代-3,4-二氢嘧啶-1(2H)-基)-2-羟甲基-4-(甲氧基-d3)四氢呋喃-3-基苯甲酸酯A1-7
(2R,3R,4R,5R)-5-(3-((benzyloxy)methyl)-2,4-dioxo-3,4-dihydropyrimidine-1(2H)-yl)-2 -Hydroxymethyl-4-(methoxy-d3)tetrahydrofuran-3-yl benzoate A1-7
在0℃,将化合物A1-6(60.0g,100.3mmol)溶于甲醇(600mL)后,加入乙酰氯(10.21g,130.1mmol),20℃反应2小时。然后加入碳酸银,20℃搅拌1小时。将反应液过滤,滤液减压浓缩,得到化合物A1-7(46.0g,94.7mmol,产率94.7%)。After dissolving compound A1-6 (60.0g, 100.3mmol) in methanol (600mL) at 0°C, acetyl chloride (10.21g, 130.1mmol) was added and the reaction was carried out at 20°C for 2 hours. Then add silver carbonate and stir at 20°C for 1 hour. The reaction liquid was filtered, and the filtrate was concentrated under reduced pressure to obtain compound A1-7 (46.0 g, 94.7 mmol, yield 94.7%).
第七步Step 7
(2S,3S,4R,5R)-3-(苄氧基)-5-(3-((苄氧基)甲基)-2,4-二氧代-3,4-二氢嘧啶-1(2H)-基)-4-(甲氧基-d3)四氢呋喃-2-羧酸A1-8
(2S,3S,4R,5R)-3-(benzyloxy)-5-(3-((benzyloxy)methyl)-2,4-dioxo-3,4-dihydropyrimidine-1 (2H)-yl)-4-(methoxy-d3)tetrahydrofuran-2-carboxylic acid A1-8
将化合物A1-7(46.0g,94.75mmol)和4-羰基-四甲基哌啶氧化物TEMPO)(6.95g,44.49mmol)溶于CH3CN(230mL)和H2O(230mL)里,加入5(6)-氨基-1-(4-氨基苯基)-1,3,3-三甲基茚满(PIDA)(67.14g,208.4mmol),25℃反应18小时。在反应液中加入乙酸乙酯(500mL)和水(300mL)萃取,有机相用无水硫酸钠干燥后浓缩,用柱层析色谱法纯化(二氯甲烷:甲醇=10:1),减压浓缩,得到化合物A1-8(目标化合物,43.0g,86mmol,产率90%)。Compound A1-7 (46.0g, 94.75mmol) and 4-carbonyl-tetramethylpiperidine oxide TEMPO) (6.95g, 44.49mmol) were dissolved in CH 3 CN (230 mL) and H 2 O (230 mL), 5(6)-amino-1-(4-aminophenyl)-1,3,3-trimethylindane (PIDA) (67.14g, 208.4mmol) was added, and the reaction was carried out at 25°C for 18 hours. Ethyl acetate (500 mL) and water (300 mL) were added to the reaction solution for extraction. The organic phase was dried with anhydrous sodium sulfate and concentrated. It was purified by column chromatography (dichloromethane:methanol=10:1), and the pressure was reduced. Concentrate to obtain compound A1-8 (target compound, 43.0 g, 86 mmol, yield 90%).
第八步Step 8
(3S,4R,5R)-2-乙酰氧基-5-(3-((苄氧基)甲基)-2,4-二氧代-3,4-二氢嘧啶-1(2H)-基)-4-(甲氧基-d3)四氢呋喃-3-基苯甲酸酯A1-9
(3S,4R,5R)-2-acetoxy-5-(3-((benzyloxy)methyl)-2,4-dioxo-3,4-dihydropyrimidine-1(2H)- methyl)-4-(methoxy-d3)tetrahydrofuran-3-yl benzoate A1-9
向干燥烧瓶中加入化合物A1-8(5g,10.0mmol),用氩气吹扫,之后添加N,N-二甲基甲酰胺(50mL)。再依次加入吡啶(8mL,100mmol)和醋酸铅(9.7mL,50mmol)。将反应物避光并且在室温搅拌48小时。反应用水(200mL)淬灭并且用乙酸乙酯(200mL)稀释。将所得的悬浮液经由硅藻土垫过滤。将固体用乙酸乙酯冲洗。将有机层分离并且在真空中浓缩。将粗品在C18反向柱上纯化,得到作为α/β混合物的标题产物A1-9(1.5g,产率:29%)。Compound A1-8 (5 g, 10.0 mmol) was added to a dry flask, purged with argon, and then N,N-dimethylformamide (50 mL) was added. Then add pyridine (8mL, 100mmol) and lead acetate (9.7mL, 50mmol) in sequence. The reaction was protected from light and stirred at room temperature for 48 hours. The reaction was quenched with water (200 mL) and diluted with ethyl acetate (200 mL). The resulting suspension was filtered through a pad of Celite. The solid was rinsed with ethyl acetate. The organic layer was separated and concentrated in vacuo. The crude product was purified on a C18 reverse column to give the title product A1-9 as an α/β mixture (1.5 g, yield: 29%).
MS(ESI):m/z=514.2[M+H]+MS (ESI): m/z=514.2[M+H] + .
第九步Step 9
(3S,4R,5R)-5-(3-((苄氧基)甲基)-2,4-二氧代-3,4-二氢嘧啶-1(2H)-基)-2-((二乙氧基磷酰)甲氧基)-4-(甲氧基-d3)四氢呋喃-3基苯甲酸酯A1-10
(3S,4R,5R)-5-(3-((benzyloxy)methyl)-2,4-dioxo-3,4-dihydropyrimidine-1(2H)-yl)-2-( (Diethoxyphosphoryl)methoxy)-4-(methoxy-d3)tetrahydrofuran-3ylbenzoate A1-10
在氩气氛下,将(羟甲基)膦酸二乙酯(2.5g,156.7mmol)和三氟化硼二乙醚配合物(5.7mL,43.8mmol)添加到化合物A1-9(1.5g,2.9mmol)于无水二氯甲烷(15mL)中的溶液中。将反应物在室温搅拌16小时。将反应物用水淬灭并且用乙酸乙酯萃取。将有机层分离,用盐水洗涤,经过无水硫酸钠干燥并且在真空中浓缩。将粗品在C18反向柱上纯化,得到标题化合物A1-10(1g,收率55%)。Under an argon atmosphere, (hydroxymethyl)phosphonate diethyl ester (2.5g, 156.7mmol) and boron trifluoride diethyl ether complex (5.7mL, 43.8mmol) were added to compound A1-9 (1.5g, 2.9 mmol) in anhydrous dichloromethane (15 mL). The reaction was stirred at room temperature for 16 hours. The reaction was quenched with water and extracted with ethyl acetate. The organic layer was separated, washed with brine, dried over anhydrous sodium sulfate and concentrated in vacuo. The crude product was purified on a C18 reverse column to obtain the title compound A1-10 (1 g, yield 55%).
MS(ESI):m/z=622.3[M+H]+MS (ESI): m/z=622.3[M+H] + .
第十步Step 10
(3S,4R,5R)-2-((二乙氧基磷酰)甲氧基)-5-(2,4-二氧代-3,4-二氢嘧啶-1(2H)-基)-4-(甲氧基-d3)四氢呋喃-3-基苯甲酸酯A1-11
(3S,4R,5R)-2-((diethoxyphosphoryl)methoxy)-5-(2,4-dioxo-3,4-dihydropyrimidine-1(2H)-yl) -4-(methoxy-d3)tetrahydrofuran-3-yl benzoate A1-11
将化合物A1-10(1g,14.6mmol)于TFA(5mL)中的溶液在80℃搅拌30分钟,然后在真空中浓缩。得到标题化合物A1-11(1g,粗品),直接用于下一步。A solution of compound Al-10 (1 g, 14.6 mmol) in TFA (5 mL) was stirred at 80°C for 30 min and then concentrated in vacuo. The title compound A1-11 (1 g, crude product) was obtained and used directly in the next step.
MS(ESI):m/z=502.3[M+H]+MS (ESI): m/z=502.3[M+H] + .
第十一步Step 11
((((3S,4R,5R)-5-(2,4-二氧代-3,4-二氢嘧啶-1(2H)-基)-3-羟基-4-(甲氧基-d3)四氢呋喃-2-基)氧基)甲基)膦酸二乙酯A1-12
((((3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidine-1(2H)-yl)-3-hydroxy-4-(methoxy-d3 )tetrahydrofuran-2-yl)oxy)methyl)phosphonate diethyl ester A1-12
将化合物A1-11(1g,2.0mmol)于氨甲醇溶液(7N,10mL)中的溶液在室温搅拌16小时。将反应混合物在真空中浓缩。将粗品在C18反向柱上纯化,得到标题化合物A1-12(300mg,产率:38%)。A solution of compound A1-11 (1 g, 2.0 mmol) in ammonia methanol solution (7N, 10 mL) was stirred at room temperature for 16 hours. The reaction mixture was concentrated in vacuo. The crude product was purified on a C18 reverse column to obtain the title compound A1-12 (300 mg, yield: 38%).
MS(ESI):m/z=398.2[M+H]+MS (ESI): m/z=398.2[M+H] + .
第十二步Step 12
2-氰乙基((2R,3S,4R,5R)-2-((二乙氧基磷酰)甲氧基)-5-(2,4-二氧代-3,4-二氢嘧啶-1(2H)-基)-4-(甲氧基-d3)四氢呋喃-3-基)二异丙基亚磷酰胺A1

2-cyanoethyl((2R,3S,4R,5R)-2-((diethoxyphosphoryl)methoxy)-5-(2,4-dioxo-3,4-dihydropyrimidine -1(2H)-yl)-4-(methoxy-d3)tetrahydrofuran-3-yl)diisopropylphosphoramidite A1

将DIPEA(58mg,0.45mmol)添加到化合物A1-12(100mg,0.252mmol)于无水二氯甲烷(2mL)中的溶液中,继而添加3-[氯-(二异丙基氨基)磷烷基]氧基丙腈(83mg,0.35mmol)。将反应混合物在室温搅拌2小时,然后用MeOH淬灭。将反应混合物用乙酸乙酯稀释,用饱和碳酸氢钠、水和盐水洗涤。将有机层在真空中浓缩。将粗品在C18反向柱上纯化,得到亚磷酰胺单体A1(80mg,产率:53%)。DIPEA (58 mg, 0.45 mmol) was added to a solution of compound A1-12 (100 mg, 0.252 mmol) in anhydrous dichloromethane (2 mL), followed by 3-[chloro-(diisopropylamino)phosphane methyl]oxypropionitrile (83 mg, 0.35 mmol). The reaction mixture was stirred at room temperature for 2 hours and then quenched with MeOH. The reaction mixture was diluted with ethyl acetate and washed with saturated sodium bicarbonate, water and brine. The organic layer was concentrated in vacuo. The crude product was purified on a C18 reverse column to obtain phosphoramidite monomer A1 (80 mg, yield: 53%).
MS(ESI):m/z=596.0[M-H]+MS(ESI): m/z=596.0[MH] + .
1H NMR(400MHz,CD3OD)δ7.74-7.70(m,1H),6.33-6.30(m,1H),5.84-5.82(m,1H),5.25-5.18(m,1H),4.51-4.44(m,1H),4.27-3.67(m,11H),2.82-2.79(m,2H),1.41-1.36(m,6H),1.29-1.23(m,12H)。 1 H NMR (400MHz, CD 3 OD) δ7.74-7.70(m,1H),6.33-6.30(m,1H),5.84-5.82(m,1H),5.25-5.18(m,1H),4.51- 4.44(m,1H),4.27-3.67(m,11H),2.82-2.79(m,2H),1.41-1.36(m,6H),1.29-1.23(m,12H).
31P NMR(400MHz,CD3OD)δ151.95,150.57,21.29。 31 P NMR (400 MHz, CD 3 OD) δ 151.95, 150.57, 21.29.
实施例7、5’末端含有氘代化学修饰的siRNA的合成Example 7. Synthesis of siRNA containing deuterated chemical modification at the 5’ end
siRNA的合成与通常的亚磷酰胺固相合成法无异,在合成反义链末端修饰的核苷酸时,使用实施例6合成的亚磷酰胺单体A1。The synthesis of siRNA is no different from the usual phosphoramidite solid-phase synthesis method. When synthesizing the nucleotide modified at the end of the antisense chain, the phosphoramidite monomer A1 synthesized in Example 6 is used.
合成过程简要描述如下:于Dr.Oligo48合成器(Biolytic)上,以Universal CPG载体为起始,根据合成程序逐个连接核苷亚磷酰胺单体。除实施例6描述的核苷亚磷酰胺单体A1外,其余核苷单体原料2’-F RNA、2’-O-甲基RNA等核苷亚磷酰胺单体购自上海兆维或苏州吉玛。采用5-乙基硫-1H-四唑(ETT)作为活化剂(0.6M乙腈溶液),使用0.22M的PADS溶于1:1体积比的乙腈和三甲基吡啶(苏州柯乐玛)溶液作为硫化试剂,可以在指定位置引入硫代磷酸酯;使用碘吡啶/水溶液(柯乐玛)作为氧化剂,可以在指定位置引入氧代磷酸酯。The synthesis process is briefly described as follows: On the Dr.Oligo48 synthesizer (Biolytic), starting from the Universal CPG vector, the nucleoside phosphoramidite monomers are connected one by one according to the synthesis procedure. Except for the nucleoside phosphoramidite monomer A1 described in Example 6, the remaining nucleoside monomer raw materials 2'-F RNA, 2'-O-methyl RNA and other nucleoside phosphoramidite monomers were purchased from Shanghai Zhaowei or Suzhou Jima. Use 5-ethylthio-1H-tetrazole (ETT) as the activator (0.6M acetonitrile solution), and use 0.22M PADS dissolved in a 1:1 volume ratio of acetonitrile and trimethylpyridine (Suzhou Croma) solution As a sulfiding reagent, phosphorothioate can be introduced at a designated position; using iodopyridine/aqueous solution (Croma) as an oxidizing agent, phosphorothioate can be introduced at a designated position.
固相合成完成后,某些实施例需用TMSI先去除5’-末端保护基团,如采用亚磷酰胺单体A1进行固相合成后,将寡核糖核苷酸粗品悬浮于无水乙腈中,室温下加入TMSI,充分搅拌后脱掉寡核糖核苷酸中的乙基(Et),得到带有NA0127的寡核糖核苷酸。然后进一步将寡核糖核苷酸自该固体支撑物裂解,裂解条件:采用3:1的28%氨水和乙醇溶液在50℃浸泡16小时。然后离心,将上清液转移到另一个离心管中,浓缩蒸发干后,使用C18反向色谱纯化,流动相为0.1M TEAA和乙腈,并使用3%三氟乙酸溶液脱除DMTr。目标寡核苷酸收集后冻干,并经LC-MS 鉴定为目标产物,再经过UV(260nm)定量。After the solid-phase synthesis is completed, in some embodiments, TMSI needs to be used to remove the 5'-end protecting group. For example, after solid-phase synthesis using phosphoramidite monomer A1, the crude oligoribonucleotide is suspended in anhydrous acetonitrile. , add TMSI at room temperature, stir thoroughly and remove the ethyl group (Et) in the oligoribonucleotide to obtain the oligoribonucleotide with NA0127. Then, the oligoribonucleotide is further cleaved from the solid support. The cleaving conditions are: soaking in a 3:1 solution of 28% ammonia and ethanol at 50° C. for 16 hours. Then centrifuge, transfer the supernatant to another centrifuge tube, concentrate and evaporate to dryness, use C18 reverse chromatography to purify, the mobile phase is 0.1M TEAA and acetonitrile, and use 3% trifluoroacetic acid solution to remove DMTr. Target oligonucleotides were collected, lyophilized, and subjected to LC-MS The target product was identified and then quantified by UV (260nm).
所得到的单链寡核苷酸,根据等摩尔比,按照互补配对,退火,最后所得到的双链siRNA溶于1×PBS中,并调整至实验所需浓度备用。The obtained single-stranded oligonucleotides were complementary paired and annealed based on equimolar ratios. Finally, the obtained double-stranded siRNA was dissolved in 1×PBS and adjusted to the concentration required for the experiment.
经过5’末端含有氘代化学修饰、2’-氟代、2’-甲氧基等修饰的正义链和反义链序列详见表11。The sequences of the sense strand and antisense strand that contain deuterated chemical modifications at the 5’ end, 2’-fluoro, 2’-methoxy and other modifications are shown in Table 11.
表11、人LPA siRNA经过修饰的正义链和反义链
Table 11. Modified sense strand and antisense strand of human LPA siRNA
小写字母m表示该字母m左侧相邻的一个核苷酸为2'-甲氧基修饰的核苷酸;小写字母f表示该字母f左侧相邻的一个核苷酸为2'-氟代修饰的核苷酸;The lowercase letter m indicates that the nucleotide adjacent to the left of the letter m is a 2'-methoxy modified nucleotide; the lowercase letter f indicates that the nucleotide adjacent to the left of the letter f is 2'-fluoro modified nucleotides;
小写字母s在中间时表示与该字母s左右相邻的两个核苷酸之间的连接为硫代磷酸酯基连接;When the lowercase letter s is in the middle, it means that the connection between the two nucleotides adjacent to the left and right of the letter s is a phosphorothioate group connection;
NAG0052’结构为:
NAG0052' structure is:
NA0127和NA0149分别表示:
NA0127 and NA0149 respectively represent:
其中,NA0127如实施例7中所描述,NA0149的合成方法参考文献US20190177729A。Among them, NA0127 is as described in Example 7, and the synthesis method of NA0149 refers to US20190177729A.
实施例8、siRNA缀合物psiCHECK的9个浓度点在靶活性Example 8. Target activity of siRNA conjugate psiCHECK at 9 concentration points
在HEK293A细胞中采用9个浓度梯度进行体外分子水平模拟在靶活性筛选。In HEK293A cells, 9 concentration gradients were used for in vitro molecular level simulation to screen the target activity.
HEK293A细胞培养于含10%胎牛血清的DMEM高糖培养基中,在37℃,5%CO2条件下培养。转染前24h,将HEK293A细胞接种于96孔板,接种密度为每孔8×103个细胞,每孔100μL培养基。HEK293A cells were cultured in DMEM high-glucose medium containing 10% fetal calf serum at 37°C and 5% CO2 . 24 h before transfection, HEK293A cells were seeded in a 96-well plate at a seeding density of 8 × 10 3 cells per well and 100 μL culture medium per well.
按照说明书,使用Lipofectamine2000(ThermoFisher,11668019)对细胞共转染siRNA缀合物及对应质粒,每孔使用0.3μL Lipofectamine2000。质粒转染量为40ng每孔。对于在靶序列质粒,siRNA/siRNA缀合物共设置9个浓度点,最高浓度点终浓度为20nM,3倍梯度稀释,9个浓度点为:20nM、6.666666667nM、2.222222222nM、0.740740741nM、0.24691358nM、0.082304527nM、0.027434842nM、0.009144947nM、0.003048316nM。转染后24h,采用Dual-Luciferase Reporter Assay System(Promega,E2940)检测在靶水平。According to the instructions, use Lipofectamine2000 (ThermoFisher, 11668019) to co-transfect cells with siRNA conjugates and corresponding plasmids, using 0.3 μL Lipofectamine2000 in each well. The transfection amount of plasmid is 40ng per well. For the target sequence plasmid, a total of 9 concentration points are set for the siRNA/siRNA conjugate. The final concentration of the highest concentration point is 20nM, 3-fold gradient dilution, and the 9 concentration points are: 20nM, 6.666666667nM, 2.222222222nM, 0.740740741nM, 0.24691358 nM, 0.082304527nM, 0.027434842nM, 0.009144947nM, 0.003048316nM. 24h after transfection, the Dual-Luciferase Reporter Assay System (Promega, E2940) was used to detect the target level.
结果如表12所示,结果表明,与TJR100437相比,TJR100747和TJR100848在psiCHECK系统针对LPA基因具有高水平的在靶抑制活性。The results are shown in Table 12. The results show that compared with TJR100437, TJR100747 and TJR100848 have a high level of on-target inhibitory activity against the LPA gene in the psiCHECK system.
表12、psi-CHECK在靶活性筛选结果
Table 12. Screening results of psi-CHECK on-target activity
实施例9、dsRNA在人源化小鼠(hu-Lp(a))体内活性的测定Example 9. Determination of dsRNA activity in humanized mice (hu-Lp(a))
本实施例中使用的双转基因人源化小鼠(hu-Lp(a)),其中人源化Apo(a)构建包含6个kringle拷贝,ApoB100引种自Taconic公司的B6.SJL-Tg(APOB)1102Sgy N20+?使用生化仪检测Lp(a)浓度,生化仪型号:Ci4100全自动生化免疫一体机。The double-transgenic humanized mouse (hu-Lp(a)) used in this example, in which the humanized Apo(a) construct contains 6 kringle copies, ApoB100 was introduced from Taconic Company's B6.SJL-Tg (APOB )1102Sgy N20+? Use a biochemical analyzer to detect Lp(a) concentration. Biochemical analyzer model: Ci4100 fully automatic biochemical immune all-in-one machine.
根据血清Lp(a)蛋白含量均匀分组,每组6只(雄),每个时间点3只,各组分别通过皮下注射的方式给予药物TJR100553、TJR100747、TJR100848(生理盐水溶解),给药剂量均为3mg/kg,化合物给药体积10μl/g。给药前采集血清40μl,给药后第21天、第28天安乐死小鼠,各收集血清40μl。使用生化仪检测血清剩余的脂蛋白Lp(a)。利用测定的每只小鼠血清Lp(a)含量,采用One-way ANOVA进行统计,实验结果见表13、图3和图4。According to the serum Lp(a) protein content, they were evenly divided into groups, 6 (male) in each group, 3 at each time point. Each group was given the drugs TJR100553, TJR100747, and TJR100848 (dissolved in normal saline) by subcutaneous injection, and the dosage was Both are 3 mg/kg, and the compound administration volume is 10 μl/g. 40 μl of serum was collected before administration. The mice were euthanized on the 21st and 28th days after administration, and 40 μl of serum were collected from each group. Use a biochemical analyzer to detect the remaining lipoprotein Lp(a) in the serum. One-way ANOVA was used to perform statistics using the measured serum Lp(a) content of each mouse. The experimental results are shown in Table 13, Figure 3 and Figure 4.
根据表13、图3结果可见,TJR100553与TJR100747和TJR100848相比,第21天时,TJR100553与TJR100747和TJR100848均具有显著性差异,P<0.001。According to the results in Table 13 and Figure 3, compared with TJR100747 and TJR100848, there was a significant difference between TJR100553 and TJR100747 and TJR100848 on day 21, P<0.001.
根据表13、图4结果可见,TJR100553与TJR100747和TJR100848相比,第28天时,TJR100553与TJR100747具有显著性差异,P<0.01,TJR100553与TJR100848具有显著性差异,P<0.001。According to the results in Table 13 and Figure 4, compared with TJR100747 and TJR100848, there was a significant difference between TJR100553 and TJR100747 on day 28, P<0.01, and there was a significant difference between TJR100553 and TJR100848, P<0.001.
表13、hu-Lp(a)小鼠血清含量
Table 13. Serum content of hu-Lp(a) mice
结果表明,5’末端含有氘代化学修饰能够显著性延长siRNA作用时间,提高生物活性。 The results show that deuterated chemical modification at the 5' end can significantly extend the action time of siRNA and improve biological activity.

Claims (24)

  1. 一种寡核苷酸,其包含式(I)所示的5’末端化学修饰,或其互变异构体修饰,所述式(I)所示的5’末端化学修饰选自:
    An oligonucleotide comprising a 5' end chemical modification shown in Formula (I), or a tautomer modification thereof, wherein the 5' end chemical modification shown in Formula (I) is selected from:
    其中,RA1、RA2各自独立地选自氢或氘;M1、M2各自独立地选自-SH或-OH;B选自碱基、氢、氘;RA3选自氢、氘、羟基、卤素、烷基、烷氧基,所述羟基、烷基、烷氧基各自任选被一个或多个氘所取代;RA4选自氢、氘、烷基、烷氧基,所述烷基、烷氧基各自任选被一个或多个氘所取代;条件是,式(I)中包含至少一个氘。Wherein, R A1 and R A2 are each independently selected from hydrogen or deuterium; M 1 and M 2 are each independently selected from -SH or -OH; B is selected from base, hydrogen, deuterium; R A3 is selected from hydrogen, deuterium, Hydroxy, halogen, alkyl, alkoxy, each of the hydroxyl, alkyl, alkoxy is optionally substituted by one or more deuterium; R A4 is selected from hydrogen, deuterium, alkyl, alkoxy, the Each of the alkyl group and alkoxy group is optionally substituted by one or more deuterium; the condition is that at least one deuterium is included in formula (I).
  2. 根据权利要求1所述的寡核苷酸,其中所述式(I)选自式(I-1),
    The oligonucleotide according to claim 1, wherein said formula (I) is selected from formula (I-1),
    其中,RA5、RA6、RA7各自独立地选自氢或氘;RA1、RA2、M1、M2、B根据权利要求1所定义,条件是,式(I-1)中包含至少一个氘。Among them, RA5 , RA6 and RA7 are each independently selected from hydrogen or deuterium; RA1 , RA2 , M1 , M2 and B are defined according to claim 1, provided that the formula (I-1) contains At least one deuterium.
  3. 根据权利要求1或2所述的寡核苷酸,其中所述式(I)选自:The oligonucleotide according to claim 1 or 2, wherein said formula (I) is selected from:
    B选自碱基或氢。 B is selected from bases or hydrogen.
  4. 根据权利要求1至3中任一项所述的寡核苷酸,所述寡核苷酸是双链RNAi抑制剂分子,包含形成双链区的正义链与反义链;所述式(I)所示的5’末端化学修饰,或其互变异构体修饰,位于反义链;优选的,所述寡核苷酸是siRNA。The oligonucleotide according to any one of claims 1 to 3, which is a double-stranded RNAi inhibitor molecule, comprising a sense strand and an antisense strand forming a double-stranded region; the formula (I ), or the tautomer modification thereof, is located on the antisense strand; preferably, the oligonucleotide is siRNA.
  5. 根据权利要求1至4中任一项所述的寡核苷酸,其中,至少一个式(I)所示的5’末端化学修饰以外的核苷酸为修饰的核苷酸。The oligonucleotide according to any one of claims 1 to 4, wherein at least one nucleotide other than the chemical modification of the 5' end represented by formula (I) is a modified nucleotide.
  6. 根据权利要求5所述的寡核苷酸,其中按照5'末端到3'末端的方向,The oligonucleotide according to claim 5, wherein in the direction from the 5' end to the 3' end,
    所述正义链中位于5’端第7、8、9位的三个连续的核苷酸为2'-氟代修饰的核苷酸,正义链其余位置均为非2'-氟代修饰的核苷酸;The three consecutive nucleotides at positions 7, 8, and 9 at the 5' end of the sense strand are 2'-fluorinated modified nucleotides, and the remaining positions of the sense strand are non-2'-fluorinated modified Nucleotide;
    所述反义链中位于5’端第1位的核苷酸为根据权利要求1至3中任一项所述的式(I)所示的5’末端化学修饰的核苷酸,所述反义链5’端的第2、4、6、10、12、14、16和18位的核苷酸各自独立地为2'-氟代修饰的核苷酸,反义链其余位置均为非2'-氟代修饰的核苷酸。The nucleotide located at the 1st position at the 5' end of the antisense strand is a 5' end chemically modified nucleotide represented by formula (I) according to any one of claims 1 to 3, The nucleotides at positions 2, 4, 6, 10, 12, 14, 16 and 18 at the 5' end of the antisense strand are independently 2'-fluorinated modified nucleotides, and the remaining positions of the antisense strand are non- 2'-Fluoromodified nucleotides.
  7. 根据权利要求6所述的寡核苷酸,其中,所述非2'-氟代修饰的核苷酸为2'-甲氧基修饰的核苷酸。The oligonucleotide of claim 6, wherein the non-2'-fluoro-modified nucleotide is a 2'-methoxy-modified nucleotide.
  8. 根据权利要求4至7中任一项所述的寡核苷酸,其中正义链和/或反义链中至少一个磷酸酯基为具有修饰基团的磷酸酯基,优选为硫代磷酸二酯基。The oligonucleotide according to any one of claims 4 to 7, wherein at least one phosphate group in the sense strand and/or the antisense strand is a phosphate group with a modifying group, preferably a phosphorothioate diester base.
  9. 根据权利要求1至8中任一项所述的寡核苷酸,其中所述寡核苷酸靶向脂蛋白(a)(LPA)基因。The oligonucleotide of any one of claims 1 to 8, wherein the oligonucleotide targets the lipoprotein (a) (LPA) gene.
  10. 根据权利要求1至9中任一项所述的寡核苷酸,所述寡核苷酸包含形成双链区的正义链与反义链;The oligonucleotide according to any one of claims 1 to 9, said oligonucleotide comprising a sense strand and an antisense strand forming a double-stranded region;
    所述正义链包含至少15个连续核苷酸,且与SEQ ID NO:1的核苷酸序列相差不超过3个核苷酸;The sense strand contains at least 15 consecutive nucleotides and differs from the nucleotide sequence of SEQ ID NO: 1 by no more than 3 nucleotides;
    所述反义链包含至少15个连续核苷酸,且与SEQ ID NO:2的核苷酸序列相差不超过3个核苷酸。The antisense strand contains at least 15 consecutive nucleotides and differs from the nucleotide sequence of SEQ ID NO: 2 by no more than 3 nucleotides.
  11. 根据权利要求10所述的寡核苷酸,其包含SEQ ID NO:1所示的正义链和SEQ ID NO:2所示的反义链。The oligonucleotide according to claim 10, which includes the sense strand shown in SEQ ID NO: 1 and the antisense strand shown in SEQ ID NO: 2.
  12. 根据权利要求1至11中任一项所述的寡核苷酸,其中, The oligonucleotide according to any one of claims 1 to 11, wherein,
    所述寡核苷酸包含SEQ ID NO:3所示的有义链和SEQ ID NO:5所示的反义链;或,The oligonucleotide includes the sense strand shown in SEQ ID NO:3 and the antisense strand shown in SEQ ID NO:5; or,
    所述寡核苷酸包含SEQ ID NO:4所示的有义链和SEQ ID NO:5所示的反义链。The oligonucleotide includes the sense strand shown in SEQ ID NO:4 and the antisense strand shown in SEQ ID NO:5.
  13. 根据权利要求1至12中任一项所述的寡核苷酸,其中,所述寡核苷酸还包含靶向配体,优选地,所述靶向配体靶向肝脏;更优选的,所述靶向配体结合脱唾液酸糖蛋白受体(ASGPR);还更优选的,所述靶向配体包括半乳糖簇或半乳糖衍生物簇,所述半乳糖衍生物选自N-乙酰基-半乳糖胺、N-三氟乙酰基半乳糖胺、N-丙酰基半乳糖胺、N-正丁酰基半乳糖胺或N-异丁酰基半乳糖胺。The oligonucleotide according to any one of claims 1 to 12, wherein the oligonucleotide further comprises a targeting ligand, preferably, the targeting ligand targets the liver; more preferably, The targeting ligand binds to the asialoglycoprotein receptor (ASGPR); more preferably, the targeting ligand includes a galactose cluster or a galactose derivative cluster, and the galactose derivative is selected from N- Acetyl-galactosamine, N-trifluoroacetylgalactosamine, N-propionylgalactosamine, N-n-butyrylgalactosamine or N-isobutyrylgalactosamine.
  14. 根据权利要求13所述的寡核苷酸,其中,所述靶向配体连接至正义链3’末端。The oligonucleotide of claim 13, wherein the targeting ligand is attached to the 3' end of the sense strand.
  15. 根据权利要求13或14所述的寡核苷酸,其中,所述靶向配体为:
    The oligonucleotide according to claim 13 or 14, wherein the targeting ligand is:
  16. 根据权利要求1至15任一项所述的寡核苷酸,其中,The oligonucleotide according to any one of claims 1 to 15, wherein,
    所述寡核苷酸包含SEQ ID NO:6所示的有义链和SEQ ID NO:5所示的反义链;或,The oligonucleotide includes the sense strand shown in SEQ ID NO:6 and the antisense strand shown in SEQ ID NO:5; or,
    所述寡核苷酸包含包含SEQ ID NO:7所示的有义链和SEQ ID NO:5所示的反义链。The oligonucleotide includes the sense strand shown in SEQ ID NO:7 and the antisense strand shown in SEQ ID NO:5.
  17. 根据权利要求1至16中任一项所述的寡核苷酸,其中,所述寡核苷酸选自如下结构或其药学上可接受的盐:

    The oligonucleotide according to any one of claims 1 to 16, wherein the oligonucleotide is selected from the following structure or a pharmaceutically acceptable salt thereof:

    其中,Af=腺嘌呤2'-F核糖核苷;Cf=胞嘧啶2'-F核糖核苷;Uf=尿嘧啶2'-F核糖核苷;Gf=鸟嘌呤2'-F核糖核苷;Am=腺嘌呤2'-OMe核糖核苷;Cm=胞嘧啶2'-OMe核糖核苷;Gm=鸟嘌呤2'-OMe核糖核苷;Um=尿嘧啶2'-OMe核糖核苷;表示硫代磷酸二酯基,表示磷酸二酯基,NAG0052’表示NA0127’表示 Among them, Af = adenine 2'-F ribonucleoside; Cf = cytosine 2'-F ribonucleoside; Uf = uracil 2'-F ribonucleoside; Gf = guanine 2'-F ribonucleoside; Am = adenine 2'-OMe ribonucleoside; Cm = cytosine 2'-OMe ribonucleoside; Gm = guanine 2'-OMe ribonucleoside; Um = uracil 2'-OMe ribonucleoside; Represents phosphorothioate diester group, Indicates phosphodiester group, NAG0052' indicates NA0127' means
  18. 根据权利要求1至16中任一项所述的寡核苷酸,其中,所述寡核苷酸选自如下结构或其药学上可接受的盐:
    The oligonucleotide according to any one of claims 1 to 16, wherein the oligonucleotide is selected from the following structure or a pharmaceutically acceptable salt thereof:
    其中,Af=腺嘌呤2'-F核糖核苷;Cf=胞嘧啶2'-F核糖核苷;Uf=尿嘧啶2'-F核糖核苷;Gf=鸟嘌呤2'-F核糖核苷;Am=腺嘌呤2'-OMe核糖核苷;Cm=胞嘧啶2'-OMe核糖核苷;Gm=鸟嘌呤2'-OMe核糖核苷;Um=尿嘧啶2'-OMe核糖核苷; 表示硫代磷酸二酯基,表示磷酸二酯基,NAG0052’表示NA0127表示 Among them, Af = adenine 2'-F ribonucleoside; Cf = cytosine 2'-F ribonucleoside; Uf = uracil 2'-F ribonucleoside; Gf = guanine 2'-F ribonucleoside; Am = adenine 2'-OMe ribonucleoside; Cm = cytosine 2'-OMe ribonucleoside; Gm = guanine 2'-OMe ribonucleoside; Um = uracil 2'-OMe ribonucleoside; Represents phosphorothioate diester group, Indicates phosphodiester group, NAG0052' indicates NA0127 means
  19. 一种式(IV)所示的化合物或其互变异构体,
    A compound represented by formula (IV) or its tautomer,
    其中,RA8、RA9各自独立地选自-CH3、-CH2CH3、-CH2CH2CN、-CH2OPiv、CH2OCH2CH2Si(CH3)3或保护基;RA10选自含磷活性反应基团;M4选自O或S;Among them, R A8 and R A9 are each independently selected from -CH 3 , -CH 2 CH 3 , -CH 2 CH 2 CN, -CH 2 OPiv, CH 2 OCH 2 CH 2 Si(CH 3 ) 3 or protecting group; R A10 is selected from phosphorus-containing active reactive groups; M 4 is selected from O or S;
    RA1、RA2、RA3、B根据权利要求1所定义,条件是,式(IV)中包含至少一个氘;R A1 , R A2 , R A3 and B are defined according to claim 1, provided that the formula (IV) contains at least one deuterium;
    优选地,式(IV)选自式(IV-1),
    Preferably, formula (IV) is selected from formula (IV-1),
    其中,RA5、RA6、RA7各自独立地选自氢或氘,RA1、RA2、B根据权利要求1所定义条件是,式(IV-1)中包含至少一个氘;Wherein, RA5 , RA6 and RA7 are each independently selected from hydrogen or deuterium. The condition defined by RA1 , RA2 and B according to claim 1 is that the formula (IV-1) contains at least one deuterium;
    RA8、RA9各自独立地选自-CH3、-CH2CH3、-CH2CH2CN、-CH2OPiv、 CH2OCH2CH2Si(CH3)3或保护基;RA10选自含磷活性反应基团;RA10选自含磷活性反应基团。 RA8 and RA9 are each independently selected from -CH 3 , -CH 2 CH 3 , -CH 2 CH 2 CN, -CH 2 OPiv, CH 2 OCH 2 CH 2 Si(CH 3 ) 3 or protecting group; R A10 is selected from phosphorus-containing active reactive groups; R A10 is selected from phosphorus-containing active reactive groups.
  20. 根据权利要求19所述的式(IV)所示的化合物或其互变异构体,其中所述式(IV)所示的化合物选自:The compound represented by formula (IV) or its tautomer according to claim 19, wherein the compound represented by formula (IV) is selected from:
    B选自碱基。 B is selected from bases.
  21. 一种制备根据权利要求1至18中任一项所述的寡核苷酸的方法,其包括以下步骤:A method for preparing the oligonucleotide according to any one of claims 1 to 18, comprising the following steps:
    利用根据权利要求19或20所述的式(IV)所示的化合物或其互变异构体,合成根据权利要求1至18中任一项所述的寡核苷酸。The oligonucleotide according to any one of claims 1 to 18 is synthesized using the compound represented by formula (IV) according to claim 19 or 20 or its tautomer.
  22. 一种药物组合物,其包含根据权利要求1至18中任一项所述的寡核苷酸;任选地,所述的药物组合物还包含一种或多种药学上可接受的赋形剂。A pharmaceutical composition comprising the oligonucleotide according to any one of claims 1 to 18; optionally, the pharmaceutical composition further comprises one or more pharmaceutically acceptable excipients agent.
  23. 一种根据权利要求1至18中任一项所述的寡核苷酸或根据权利要求22所述的药物组合物在制备药物中的应用,所述药物用于预防和/或治疗心血管疾病,或者,所述药物用于预防和/或治疗与脂蛋白(a)和/或载脂蛋白(a)水平升高相关的疾病;优选地,所述的与脂蛋白(a)和/或载脂蛋白(a)水平升高相关的疾病选自心血管疾病;所述心血管疾病选自缺血性中风、动脉粥样硬化、血栓形成、冠心病、下肢动脉病变或主动脉瓣狭窄、心肌梗塞、冠状动脉狭窄、颈动脉狭窄、股动脉狭窄、心脏衰竭。An application of the oligonucleotide according to any one of claims 1 to 18 or the pharmaceutical composition according to claim 22 in the preparation of medicines for preventing and/or treating cardiovascular diseases , or, the medicament is used to prevent and/or treat diseases associated with elevated levels of lipoprotein (a) and/or apolipoprotein (a); Diseases associated with elevated apolipoprotein(a) levels are selected from cardiovascular diseases; the cardiovascular diseases are selected from ischemic stroke, atherosclerosis, thrombosis, coronary heart disease, lower extremity arterial disease or aortic stenosis, Myocardial infarction, coronary artery stenosis, carotid artery stenosis, femoral artery stenosis, heart failure.
  24. 一种递送寡核苷酸至肝脏的方法,其包括向受试者给予有效量或有效剂量的根据权利要求1至18中任一项所述的寡核苷酸或根据权利要求22所述的药物组合物。 A method of delivering an oligonucleotide to the liver, comprising administering to a subject an effective amount or an effective dose of an oligonucleotide according to any one of claims 1 to 18 or an oligonucleotide according to claim 22 Pharmaceutical compositions.
PCT/CN2023/090779 2022-04-26 2023-04-26 Deuterated chemical modification and oligonucleotide including same WO2023208023A1 (en)

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