WO2023109935A1 - Dsrna, and preparation method therefor and use thereof - Google Patents
Dsrna, and preparation method therefor and use thereof Download PDFInfo
- Publication number
- WO2023109935A1 WO2023109935A1 PCT/CN2022/139481 CN2022139481W WO2023109935A1 WO 2023109935 A1 WO2023109935 A1 WO 2023109935A1 CN 2022139481 W CN2022139481 W CN 2022139481W WO 2023109935 A1 WO2023109935 A1 WO 2023109935A1
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- WIPO (PCT)
- Prior art keywords
- seq
- nucleotide
- antisense strand
- dsrna
- sense strand
- Prior art date
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- 229920001184 polypeptide Polymers 0.000 description 1
- 229920001282 polysaccharide Polymers 0.000 description 1
- 239000005017 polysaccharide Substances 0.000 description 1
- 159000000001 potassium salts Chemical class 0.000 description 1
- 239000003755 preservative agent Substances 0.000 description 1
- 150000003141 primary amines Chemical class 0.000 description 1
- 125000002924 primary amino group Chemical group [H]N([H])* 0.000 description 1
- MFDFERRIHVXMIY-UHFFFAOYSA-N procaine Chemical compound CCN(CC)CCOC(=O)C1=CC=C(N)C=C1 MFDFERRIHVXMIY-UHFFFAOYSA-N 0.000 description 1
- 229960004919 procaine Drugs 0.000 description 1
- 230000008569 process Effects 0.000 description 1
- 108090000765 processed proteins & peptides Proteins 0.000 description 1
- 102000004196 processed proteins & peptides Human genes 0.000 description 1
- 229940002612 prodrug Drugs 0.000 description 1
- 239000000651 prodrug Substances 0.000 description 1
- VVWRJUBEIPHGQF-MDZDMXLPSA-N propan-2-yl (ne)-n-propan-2-yloxycarbonyliminocarbamate Chemical compound CC(C)OC(=O)\N=N\C(=O)OC(C)C VVWRJUBEIPHGQF-MDZDMXLPSA-N 0.000 description 1
- 125000001436 propyl group Chemical group [H]C([*])([H])C([H])([H])C([H])([H])[H] 0.000 description 1
- 125000003373 pyrazinyl group Chemical group 0.000 description 1
- 125000003226 pyrazolyl group Chemical group 0.000 description 1
- 125000004076 pyridyl group Chemical group 0.000 description 1
- 125000000714 pyrimidinyl group Chemical group 0.000 description 1
- 229940043131 pyroglutamate Drugs 0.000 description 1
- 125000000168 pyrrolyl group Chemical group 0.000 description 1
- 230000001177 retroviral effect Effects 0.000 description 1
- 238000004007 reversed phase HPLC Methods 0.000 description 1
- YGSDEFSMJLZEOE-UHFFFAOYSA-M salicylate Chemical compound OC1=CC=CC=C1C([O-])=O YGSDEFSMJLZEOE-UHFFFAOYSA-M 0.000 description 1
- 229960001860 salicylate Drugs 0.000 description 1
- 229940116351 sebacate Drugs 0.000 description 1
- CXMXRPHRNRROMY-UHFFFAOYSA-L sebacate(2-) Chemical compound [O-]C(=O)CCCCCCCCC([O-])=O CXMXRPHRNRROMY-UHFFFAOYSA-L 0.000 description 1
- 125000002914 sec-butyl group Chemical group [H]C([H])([H])C([H])([H])C([H])(*)C([H])([H])[H] 0.000 description 1
- 150000003335 secondary amines Chemical class 0.000 description 1
- 229940126586 small molecule drug Drugs 0.000 description 1
- 229910000029 sodium carbonate Inorganic materials 0.000 description 1
- RSIJVJUOQBWMIM-UHFFFAOYSA-L sodium sulfate decahydrate Chemical compound O.O.O.O.O.O.O.O.O.O.[Na+].[Na+].[O-]S([O-])(=O)=O RSIJVJUOQBWMIM-UHFFFAOYSA-L 0.000 description 1
- 239000007790 solid phase Substances 0.000 description 1
- 241000894007 species Species 0.000 description 1
- 238000009987 spinning Methods 0.000 description 1
- 239000003381 stabilizer Substances 0.000 description 1
- 229940114926 stearate Drugs 0.000 description 1
- 230000007863 steatosis Effects 0.000 description 1
- 150000003431 steroids Chemical class 0.000 description 1
- 238000003756 stirring Methods 0.000 description 1
- 230000004960 subcellular localization Effects 0.000 description 1
- 238000007920 subcutaneous administration Methods 0.000 description 1
- KDYFGRWQOYBRFD-UHFFFAOYSA-L succinate(2-) Chemical compound [O-]C(=O)CCC([O-])=O KDYFGRWQOYBRFD-UHFFFAOYSA-L 0.000 description 1
- 229940014800 succinic anhydride Drugs 0.000 description 1
- 125000000475 sulfinyl group Chemical group [*:2]S([*:1])=O 0.000 description 1
- 239000006228 supernatant Substances 0.000 description 1
- 239000004094 surface-active agent Substances 0.000 description 1
- 239000000375 suspending agent Substances 0.000 description 1
- 239000003765 sweetening agent Substances 0.000 description 1
- GFYHSKONPJXCDE-UHFFFAOYSA-N sym-collidine Natural products CC1=CN=C(C)C(C)=C1 GFYHSKONPJXCDE-UHFFFAOYSA-N 0.000 description 1
- 208000024891 symptom Diseases 0.000 description 1
- 238000001308 synthesis method Methods 0.000 description 1
- 238000010189 synthetic method Methods 0.000 description 1
- 229940095064 tartrate Drugs 0.000 description 1
- 125000000999 tert-butyl group Chemical group [H]C([H])([H])C(*)(C([H])([H])[H])C([H])([H])[H] 0.000 description 1
- 125000001973 tert-pentyl group Chemical group [H]C([H])([H])C([H])([H])C(*)(C([H])([H])[H])C([H])([H])[H] 0.000 description 1
- 150000003512 tertiary amines Chemical class 0.000 description 1
- 229960004559 theobromine Drugs 0.000 description 1
- VLLMWSRANPNYQX-UHFFFAOYSA-N thiadiazole Chemical compound C1=CSN=N1.C1=CSN=N1 VLLMWSRANPNYQX-UHFFFAOYSA-N 0.000 description 1
- 125000000335 thiazolyl group Chemical group 0.000 description 1
- 125000001544 thienyl group Chemical group 0.000 description 1
- RYYWUUFWQRZTIU-UHFFFAOYSA-K thiophosphate Chemical compound [O-]P([O-])([O-])=S RYYWUUFWQRZTIU-UHFFFAOYSA-K 0.000 description 1
- 229940104230 thymidine Drugs 0.000 description 1
- JOXIMZWYDAKGHI-UHFFFAOYSA-N toluene-4-sulfonic acid Chemical compound CC1=CC=C(S(O)(=O)=O)C=C1 JOXIMZWYDAKGHI-UHFFFAOYSA-N 0.000 description 1
- 231100000331 toxic Toxicity 0.000 description 1
- 230000002588 toxic effect Effects 0.000 description 1
- 231100000419 toxicity Toxicity 0.000 description 1
- 230000001988 toxicity Effects 0.000 description 1
- WBYWAXJHAXSJNI-VOTSOKGWSA-M trans-cinnamate Chemical compound [O-]C(=O)\C=C\C1=CC=CC=C1 WBYWAXJHAXSJNI-VOTSOKGWSA-M 0.000 description 1
- 230000007704 transition Effects 0.000 description 1
- 125000001425 triazolyl group Chemical group 0.000 description 1
- AVBGNFCMKJOFIN-UHFFFAOYSA-N triethylammonium acetate Chemical compound CC(O)=O.CCN(CC)CC AVBGNFCMKJOFIN-UHFFFAOYSA-N 0.000 description 1
- LEIMLDGFXIOXMT-UHFFFAOYSA-N trimethylsilyl cyanide Chemical compound C[Si](C)(C)C#N LEIMLDGFXIOXMT-UHFFFAOYSA-N 0.000 description 1
- FTVLMFQEYACZNP-UHFFFAOYSA-N trimethylsilyl trifluoromethanesulfonate Chemical compound C[Si](C)(C)OS(=O)(=O)C(F)(F)F FTVLMFQEYACZNP-UHFFFAOYSA-N 0.000 description 1
- YFTHZRPMJXBUME-UHFFFAOYSA-N tripropylamine Chemical compound CCCN(CCC)CCC YFTHZRPMJXBUME-UHFFFAOYSA-N 0.000 description 1
- 229940075466 undecylenate Drugs 0.000 description 1
- 230000003827 upregulation Effects 0.000 description 1
- 239000013598 vector Substances 0.000 description 1
- 235000019165 vitamin E Nutrition 0.000 description 1
- 229940046009 vitamin E Drugs 0.000 description 1
- 239000011709 vitamin E Substances 0.000 description 1
- 239000000080 wetting agent Substances 0.000 description 1
- 239000012224 working solution Substances 0.000 description 1
- 239000011701 zinc Substances 0.000 description 1
- 229910052725 zinc Inorganic materials 0.000 description 1
Images
Classifications
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K31/00—Medicinal preparations containing organic active ingredients
- A61K31/70—Carbohydrates; Sugars; Derivatives thereof
- A61K31/7088—Compounds having three or more nucleosides or nucleotides
- A61K31/713—Double-stranded nucleic acids or oligonucleotides
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K48/00—Medicinal preparations containing genetic material which is inserted into cells of the living body to treat genetic diseases; Gene therapy
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P7/00—Drugs for disorders of the blood or the extracellular fluid
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/11—DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
- C12N15/113—Non-coding nucleic acids modulating the expression of genes, e.g. antisense oligonucleotides; Antisense DNA or RNA; Triplex- forming oligonucleotides; Catalytic nucleic acids, e.g. ribozymes; Nucleic acids used in co-suppression or gene silencing
Definitions
- RNA interference is an effective way to silence gene expression. According to statistics, more than 80% of the disease-related proteins in the human body cannot be targeted by current conventional small molecule drugs and biological macromolecular preparations, and are non-druggable proteins. Using RNA interference technology, we can design appropriate siRNA based on the mRNA encoding these proteins, specifically target the target mRNA and degrade the target mRNA, so as to inhibit the production of related proteins. Therefore, siRNA has a very important prospect of drug development. However, in order to achieve the RNA interference effect for therapeutic purposes in vivo, it is necessary to deliver siRNA molecules to specific cells in vivo.
- asialoglycoprotein receptor is a receptor specifically expressed in hepatocytes, which has high abundance on the surface of hepatocytes and is characterized by rapid intracellular and extracellular transitions.
- Monosaccharide and polysaccharide molecules such as galactose, galactosamine, and N-acetylgalactosamine have high affinity for ASGPR.
- GalNAc galactosamine molecular clusters
- Y is selected from O, NH and S;
- J 2 is H or C 1 -C 6 alkyl
- J 1 is H or C 1 -C 6 alkyl
- R 1 and R 2 are directly connected to form a ring
- B is a base
- R 13 is a single or double bond, and when When it is a single bond, R 13 is independently CR 17 R 18 , NR 16 , O or S, when When it is a double bond, R 13 is independently CR 19 or N;
- R 14 is independently CR 19 or N;
- Ring A is cycloalkyl, heterocycloalkyl, aryl or heteroaryl, present or absent, and when ring A exists, R 15 is independently CR 19 or N, and when ring A does not exist, R 15 independently CR 17 R 18 , NR 16 or O;
- R' and R" are independently hydrogen, deuterium, hydroxyl, alkyl, alkoxy, cycloalkyl, heterocycloalkyl, aryl or heteroaryl, the alkyl, alkoxy, cycloalkyl, Heterocycloalkyl, aryl or heteroaryl is optionally substituted by one or more substituents selected from halogen, hydroxy, oxo, nitro and cyano;
- n1, p1 and q1 are independently 0, 1, 2, 3 or 4;
- z1, z2, z3, z4, z5, z6, z7, z8 and z9 are independently an integer of 0-10;
- r1 is an integer of 1-10.
- the chemical modification represented by formula (I), its tautomer, or a pharmaceutically acceptable salt thereof is replaced with a 2'-methoxy modification.
- the chemical modification shown in formula (I) is selected from the chemical modification shown in formula (I-1):
- Y is selected from O, NH and S;
- Each X is independently selected from CR 4 (R 4 '), S, NR 5 and NH-CO, wherein R 4 , R 4 ', R 5 are independently H or C 1 -C 6 alkyl;
- Each J 1 and J 2 are independently H or C 1 -C 6 alkyl
- R 1 and R 2 are directly connected to form a ring
- B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
- B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
- the chemical modification shown in formula (I) is selected from the chemical modification shown in formula (I-2):
- Y is selected from O, NH and S;
- Each X is independently selected from CR 4 (R 4 '), S, NR 5 and NH-CO, wherein R 4 , R 4 ', R 5 are independently H or C 1 -C 6 alkyl;
- Each J 1 and J 2 are independently H or C 1 -C 6 alkyl
- R 1 and R 2 are directly connected to form a ring
- B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
- B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
- each X is independently selected from CR 4 (R 4 '), S, NR 5 and NH-CO, wherein R 4 , R 4 ', R 5 are each independently H or C 1 -C 3 alkyl groups;
- Each J 1 and J 2 are independently H or C 1 -C 3 alkyl
- R 1 and R 2 are directly connected to form a ring
- B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
- B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
- each X is independently selected from CR 4 (R 4 '), S, NR 5 , and NH-CO, wherein R 4 , R 4 ', and R 5 are each independently H, methyl, ethyl radical, n-propyl or isopropyl;
- Each J 1 and J 2 are independently H or methyl
- R 1 and R 2 are directly connected to form a ring
- B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
- B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
- each X is independently selected from CR 4 (R 4 '), S, NR 5 , and NH-CO, wherein R 4 , R 4 ', and R 5 are each independently H, methyl, ethyl radical, n-propyl or isopropyl;
- Each J 1 and J 2 are independently H or methyl
- R 1 and R 2 are directly connected to form a ring
- B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
- B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
- J 1 and J 2 are independently H;
- R 1 is selected from H, methyl and CH 2 OH;
- R 2 is selected from H, OH, NH 2 , methyl and CH 2 OH;
- R 3 is selected from H, OH, NH 2 , methyl and CH 2 OH;
- B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- J 1 and J 2 are independently H;
- R 1 and R 2 are directly connected to form a ring
- B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
- Each X is independently selected from CR 4 (R 4 '), NR 5 and NH-CO, R 4 , R 4 ', R 5 are independently H or C 1 -C 6 alkyl;
- J 2 is H or C 1 -C 6 alkyl
- R 3 is selected from H, OH, NH 2 , C 1 -C 6 alkyl, C 1 -C 6 alkoxy and (CH 2 ) p R 6 ;
- Q 1 is Q 2 is R 2 ; or Q 1 is R 2 and Q 2 is
- R 1 is selected from H, OH, C 1 -C 6 alkyl, C 1 -C 6 alkoxy and (CH 2 ) q R 7 ;
- J 1 is H or C 1 -C 6 alkyl
- R 2 is selected from H, OH, C 1 -C 6 alkyl, C 1 -C 6 alkoxy and (CH 2 ) r R 8 ;
- R 1 and R 2 are directly connected to form a 3-6 membered ring;
- B is a base
- X is independently selected from CR 4 (R 4 ′) and NH—CO.
- R 3 is selected from H, C 1 -C 6 alkyl, and (CH 2 ) p R 6 .
- Each X is independently selected from CR 4 (R 4 ') and NH-CO, R 4 and R 4 ' are independently H or C 1 -C 6 alkyl;
- Q 1 is Q 2 is R 2 ; or Q 1 is R 2 and Q 2 is
- B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
- B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
- Each X is independently selected from CR 4 (R 4 '), R 4 and R 4 ' are independently H or C 1 -C 6 alkyl;
- Q 1 is Q 2 is R 2 ; or Q 1 is R 2 and Q 2 is
- R 1 is selected from H and C 1 -C 6 alkyl
- J 1 is H or C 1 -C 6 alkyl
- R 1 and R 2 are directly connected to form a 5-6 membered ring;
- B is a base
- B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
- Y is O.
- J 2 is H or methyl. In some embodiments, J is H.
- R is selected from H and methyl.
- R1 and R2 are directly linked to form a 5-6 membered ring. In some embodiments, R and R are directly connected to form a 3-6 membered cycloalkyl. In some embodiments, R 1 and R 2 are directly connected to form cyclopentyl or cyclohexyl.
- the chemical modification represented by the formula (I) is selected from any of the following structures:
- B is selected from purine base, pyrimidine base, indole, 5-nitroindole and 3-nitropyrrole.
- B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
- the chemical modification represented by the formula (I) is selected from any of the following structures:
- B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
- B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
- B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
- the chemical modification represented by the formula (I) is selected from any of the following structures:
- B is selected from purine base, pyrimidine base, indole, 5-nitroindole and 3-nitropyrrole.
- B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
- the nucleotide comprising the chemical modification represented by formula (I), its tautomer or a pharmaceutically acceptable salt thereof is selected from the group consisting of the chemical modification represented by formula (I'), its Nucleotides of tautomers or pharmaceutically acceptable salts thereof,
- Each X is independently selected from CR 4 (R 4 '), S, NR 5 and NH-CO, wherein R 4 , R 4 ', R 5 are independently H or C 1 -C 6 alkyl;
- J 2 is H or C 1 -C 6 alkyl
- Q 1' is Q 2' is R 2 ; or Q 1' is R 2 and Q 2' is
- M is O or S
- R when X is NH-CO, R is not H.
- Y is selected from O, NH and S;
- Each J 1 and J 2 are independently H or C 1 -C 6 alkyl
- M is O or S
- R 1 and R 2 are directly connected to form a ring
- B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
- B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
- the chemical modification shown in formula (I') is selected from the chemical modification shown in formula (I'-2):
- Y is selected from O, NH and S;
- Each X is independently selected from CR 4 (R 4 '), S, NR 5 and NH-CO, wherein R 4 , R 4 ', R 5 are independently H or C 1 -C 6 alkyl;
- Each J 1 and J 2 are independently H or C 1 -C 6 alkyl
- R 1 and R 2 are directly connected to form a ring
- M is O or S
- B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
- B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
- each X is independently selected from CR 4 (R 4 '), S, NR 5 and NH-CO, wherein R 4 , R 4 ', R 5 are each independently H or C 1 -C 3 alkyl groups;
- Each J 1 and J 2 are independently H or C 1 -C 3 alkyl
- R 1 and R 2 are directly connected to form a ring
- B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
- B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
- each X is independently selected from CR 4 (R 4 '), S, NR 5 , and NH-CO, wherein R 4 , R 4 ', and R 5 are each independently H, methyl, ethyl radical, n-propyl or isopropyl;
- Each J 1 and J 2 are independently H or methyl
- R 1 and R 2 are directly connected to form a ring
- B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
- B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
- each X is independently selected from CR 4 (R 4 '), S, NR 5 , and NH-CO, wherein R 4 , R 4 ', and R 5 are each independently H, methyl, ethyl radical, n-propyl or isopropyl;
- Each J 1 and J 2 are independently H or methyl
- R 1 and R 2 are directly connected to form a ring
- B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
- B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
- J 1 and J 2 are independently H;
- R 1 is selected from H, methyl and CH 2 OH;
- R 2 is selected from H, OH, NH 2 , methyl and CH 2 OH;
- R 3 is selected from H, OH, NH 2 , methyl and CH 2 OH;
- R 1 and R 2 are directly connected to form a ring
- B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
- B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
- J 1 and J 2 are independently H;
- R 1 is selected from H, methyl and CH 2 OH;
- R 2 is selected from H, methyl and CH 2 OH;
- R 3 is selected from H, OH, NH 2 , methyl and CH 2 OH;
- R 1 and R 2 are directly connected to form a ring
- B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
- B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
- Y is O or NH
- Each X is independently selected from CR 4 (R 4 '), NR 5 and NH-CO, R 4 , R 4 ', R 5 are independently H or C 1 -C 6 alkyl;
- J 2 is H or C 1 -C 6 alkyl
- R 3 is selected from H, OH, NH 2 , C 1 -C 6 alkyl, C 1 -C 6 alkoxy and (CH 2 ) p R 6 ;
- Q 1' is Q 2' is R 2 ; or Q 1' is R 2 and Q 2' is
- R 1 is selected from H, OH, C 1 -C 6 alkyl, C 1 -C 6 alkoxy and (CH 2 ) q R 7 ;
- J 1 is H or C 1 -C 6 alkyl
- R 2 is selected from H, OH, C 1 -C 6 alkyl, C 1 -C 6 alkoxy and (CH 2 ) r R 8 ;
- R 1 and R 2 are directly connected to form a 3-6 membered ring;
- M is O or S
- B is a base
- X is independently selected from CR 4 (R 4 ′) and NH—CO.
- X is independently selected from CR 4 (R 4 ′).
- R 3 is selected from H, C 1 -C 6 alkyl, and (CH 2 ) p R 6 .
- R 3 is selected from H and C 1 -C 6 alkyl.
- R 1 is selected from H, C 1 -C 6 alkyl, and (CH 2 ) q R 7 .
- R 1 is selected from H and C 1 -C 6 alkyl.
- R 2 is selected from H, OH, C 1 -C 6 alkyl, and (CH 2 ) r R 8 .
- R 2 is selected from H, C 1 -C 6 alkyl, and (CH 2 ) r R 8 .
- Y is O
- Each X is independently selected from CR 4 (R 4 ') and NH-CO, R 4 and R 4 ' are independently H or C 1 -C 6 alkyl;
- J 2 is H or C 1 -C 6 alkyl
- R 3 is selected from H, C 1 -C 6 alkyl and (CH 2 ) p R 6 ;
- Q 1' is Q 2' is R 2 ; or Q 1' is R 2 and Q 2' is
- R 1 is selected from H, C 1 -C 6 alkyl and (CH 2 ) q R 7 ;
- R 2 is selected from H, OH, C 1 -C 6 alkyl and (CH 2 ) r R 8 ;
- R 1 and R 2 are directly connected to form a 5-6 membered ring;
- M is O or S
- B is a base
- B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
- B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
- Y is O
- Each X is independently selected from CR 4 (R 4 '), R 4 and R 4 ' are independently H or C 1 -C 6 alkyl;
- R 3 is selected from H and C 1 -C 6 alkyl
- Q 1' is Q 2' is R 2 ; or Q 1' is R 2 and Q 2' is
- R 1 is selected from H and C 1 -C 6 alkyl
- J 1 is H or C 1 -C 6 alkyl
- R 1 and R 2 are directly connected to form a 5-6 membered ring;
- M is O or S
- B is a base
- B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
- B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
- Y is O.
- X is independently selected from CR 4 (R 4 '), NR 5 and NH-CO, R 4 , R 4 ', and R 5 are independently H, methyl, ethyl, n-propyl or isopropyl.
- X is independently selected from NH—CO, CH 2 and NH.
- X is independently selected from NH—CO and CH 2 .
- X is CH2 .
- J 2 is H or methyl. In some embodiments, J is H.
- R is selected from H and methyl.
- R2 is selected from H, methyl, and CH2OH .
- R1 and R2 are directly linked to form a 5-6 membered ring. In some embodiments, R and R are directly connected to form a 3-6 membered cycloalkyl. In some embodiments, R 1 and R 2 are directly connected to form cyclopentyl or cyclohexyl.
- the chemical modification represented by the formula (I') is selected from any of the following structures:
- M is O or S
- B is selected from purine bases, pyrimidine bases, indole, 5-nitroindole and 3-nitropyrrole.
- B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
- B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
- the chemical modification represented by the formula (I') is selected from any of the following structures:
- M is O or S
- B is selected from purine bases, pyrimidine bases, indole, 5-nitroindole and 3-nitropyrrole.
- B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
- B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
- the chemical modification represented by the formula (I') is selected from any of the following structures:
- M is O or S
- B is selected from purine bases, pyrimidine bases, indole, 5-nitroindole and 3-nitropyrrole.
- B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
- B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
- the chemical modification represented by the formula (I') is selected from any of the following structures:
- B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
- B is the same as the base of the antisense strand when the nucleotide at this position is unmodified.
- R 13 is CR 17 R 18 , NR 16 , O or S;
- R 14 is CR 19 ;
- R 15 is independently CR 17 R 18 , NR 16 or O;
- R 16 to R 19 are independently hydrogen, deuterium or alkyl
- m1, p1 and q1 are independently 0, 1, 2, 3 or 4;
- z5, z6, z7, z8 and z9 are independently an integer of 0-10;
- r1 is an integer of 1-10.
- R 16 is hydrogen or C 1-6 alkyl
- R 13 is CR 17 R 18 or O
- R 14 is CR 19 ;
- R 15 is independently CR 17 R 18 or O;
- R 16 to R 19 are independently hydrogen or alkyl
- n 1;
- z8 and z9 are independently an integer of 0-10;
- L 2 is -(CH 2 ) j15 -(OCH 2 CH 2 ) 1-4 -(CH 2 ) j16 - or
- j15 and j16 are independently an integer of 0-4;
- r1 is 3, 4, 5 or 6.
- j11, j12, j13, and j14 are independently integers from 0-2 or 4-10. In some embodiments, j11, j12, j13, and j14 are independently 0, 1, 2, 6, 7, 8, 9, or 10.
- L can be The definition of j12 is the same as that described in the previous scheme, wherein the terminal a1 is connected to B1, and the terminal b1 is connected to R11 .
- L can be Wherein, terminal a1 is connected to B1 , and terminal b1 is connected to R11 .
- R 11 can be a chemical bond and R 12 can be NR 16 , and the definition of R 16 is the same as described in any of the previous schemes.
- R 16 can be hydrogen or C 1-6 alkyl.
- R 16 can be hydrogen, methyl, ethyl, propyl, or isopropyl.
- R 16 can be hydrogen
- R 17 and R 18 can be hydrogen.
- R 19 can be hydrogen
- ring A when present, can be a C 6-12 aryl.
- ring A can be phenyl
- m1 can be 0 or 1.
- m1 can be 3.
- n1 can be 0 or 1.
- B 1 can be any organic compound
- B 1 can be any organic compound
- the definitions of z5, z6, z7, z8 and z9 are the same as those described in the previous scheme.
- B 1 can be any organic compound
- L 2 can be a C 1 -C 12 alkyl chain.
- L2 can be In some embodiments, L2 can be In some embodiments, L2 can be In some embodiments, L2 can be In some embodiments, L2 can be Among them, the a3 end is connected to the O atom, and the b3 end is connected to the B1 .
- L2 can be Among them, the a3 end is connected to the O atom, and the b3 end is connected to the B1 .
- Q3 can be In some embodiments, Q3 can be Wherein, the definitions of R 13 , R 14 , R 15 and n1 are the same as those described in the previous scheme.
- R 13 , R 14 , R 15 , p1 and q1 are the same as those described in the previous scheme.
- R 13 , R 14 , n1, p1 and q1 are the same as those described in the previous scheme.
- R 13 , R 14 , n1, p1 and q1 are the same as those described in the previous scheme.
- Can be The definitions of n1, p1 and q1 are the same as those described in the previous scheme.
- the ligand can be any of the following structures or a pharmaceutically acceptable salt thereof,
- the ligand can be any of the following structures or a pharmaceutically acceptable salt thereof,
- the ligand can be the following structure or a pharmaceutically acceptable salt thereof,
- the chemical modification represented by the formula (I) is B is selected from guanine, adenine, cytosine and uracil; and the ligand is any of the following structures or a pharmaceutically acceptable salt thereof,
- the chemical modification represented by the formula (I) is B is selected from guanine, adenine, cytosine and uracil, and the ligand is any of the following structures or a pharmaceutically acceptable salt thereof,
- the chemical modification represented by the formula (I) is B is selected from guanine, adenine, cytosine and uracil; and, the ligand is the following structure or a pharmaceutically acceptable salt thereof,
- the N- Acetyl-galactosamine moiety is N- Acetyl-galactosamine moiety.
- the siRNA and the ligand are covalently or non-covalently linked.
- the 3' end and/or the 5' end of the sense strand is conjugated to the ligand.
- the 3' end of the sense strand is conjugated to the ligand.
- the ligand is attached to the end of the siRNA via a phosphate group or a phosphorothioate group.
- the ligand is attached to the end of the siRNA via a phosphodiester group or a phosphorothioate group.
- the ligand is attached to the end of the siRNA via a phosphodiester group.
- the ligand is indirectly linked to the end of the siRNA via a phosphate group or a phosphorothioate group.
- the ligand is directly attached to the end of the siRNA via a phosphate group or a phosphorothioate group.
- the ligand is directly linked to the 3' end of the sense strand of the siRNA via a phosphate group or a phosphorothioate group.
- the phosphate group is a phosphate monoester group or a phosphodiester group. In some embodiments, the phosphate group is a phosphodiester group.
- the phosphorothioate group is a phosphorothioate monoester group or a phosphorothioate diester group. In some embodiments, the phosphorothioate group is a phosphorothioate diester group.
- a lipophilic group such as cholesterol can be introduced at the end of the sense strand of the siRNA.
- the lipophilic group includes binding with a small interfering nucleic acid with a covalent bond, such as introducing cholesterol, Lipoproteins, vitamin E, etc., in order to facilitate the interaction with intracellular mRNA through the cell membrane composed of lipid bilayers.
- siRNA can also be modified by non-covalent bonds, such as binding phospholipid molecules, polypeptides, and cationic polymers through hydrophobic bonds or ionic bonds to increase stability and biological activity.
- the nucleotide comprising the chemical modification represented by formula (I), its tautomer or a pharmaceutically acceptable salt thereof is located at the 5th, 6th, or 5th position of the 5' end of the antisense strand No. 7.
- the nucleotide comprising the chemical modification represented by formula (I), its tautomer or a pharmaceutically acceptable salt thereof is located at position 7 at the 5' end of the antisense strand.
- B is selected from adenine, guanine, 2,6-Diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, 2,6-Diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, 2,6-Diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is selected from adenine, guanine, 2,6-Diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
- B is the same as the base when the 5th nucleotide at the 5' end of the antisense strand is unmodified.
- B is the same as the base when the 6th nucleotide at the 5' end of the antisense strand is unmodified.
- B is the same as the base when the 7th nucleotide at the 5' end of the antisense strand is unmodified.
- B is the same as the base when the 8th nucleotide at the 5' end of the antisense strand is unmodified.
- At least one additional nucleotide in the sense strand and/or antisense strand is a modified nucleotide selected from the group consisting of: 2'-methoxy modified Nucleotides, 2'-substituted alkoxy-modified nucleotides, 2'-alkyl-modified nucleotides, 2'-substituted alkyl-modified nucleotides, 2'-amino-modified Nucleotides, 2'-substituted amino-modified nucleotides, 2'-fluoro-modified nucleotides, 2'-deoxynucleotides, 2'-deoxy-2'-fluoro-modified nucleosides acid, 3'-deoxy-thymidine nucleotides, isonucleotides, LNA, ENA, cET, UNA, GNA; in some embodiments, the modified nucleotides are independently selected from: 2'-methoxy modified Nucle
- the sense strand contains three consecutive nucleotides with the same modification. In some embodiments, the three nucleotides with the same modification are 2'-fluoro-modified nucleotides.
- the nucleotides at positions 2, 4, 6, 10, 12, 14, 16 and 18 of the antisense strand are each independently 2'- Fluoro-modified nucleotides.
- the antisense strand is at least partially reverse complementary to the target sequence to mediate RNA interference; in some embodiments, there are no more than 5, no More than 4, no more than 3, no more than 2, no more than 1 mismatch; in some embodiments, the antisense strand is fully reverse complementary to the target sequence.
- the sense strand and the antisense strand are at least partially reverse complementary to form a double-stranded region; in some embodiments, there are no more than 5 , no more than 4, no more than 3, no more than 2, no more than 1 mismatch; in some embodiments, the sense strand is fully reverse complementary to the antisense strand.
- the sense and antisense strands each independently have 16 to 35, 16 to 34, 17 to 34, 17 to 33, 18 to 33, 18 to 32, 18 to 31, 18 to 30, 18 to 29, 18 to 28, 18 to 27, 18 to 26, 18 to 25, 18 to 24, 18 to 23, 19 to 25, 19 to 24, or 19 to 23 nucleotides (eg, 19, 20, 21, 22, 23 nucleotides).
- the sense strand and the antisense strand are the same or different in length, the sense strand is 19-23 nucleotides in length, and the antisense strand is 19-26 nucleotides in length acid.
- the length ratio of the sense strand and the antisense strand in the dsRNA provided by the present disclosure can be 19/20, 19/21, 19/22, 19/23, 19/24, 19/25, 19/26, 20 /20, 20/21, 20/22, 20/23, 20/24, 20/25, 20/26, 21/20, 21/21, 21/22, 21/23, 21/24, 21/25 , 21/26, 22/20, 22/21, 22/22, 22/23, 22/24, 22/25, 22/26, 23/20, 23/21, 23/22, 23/23, 23 /24, 23/25 or 23/26.
- the sense and antisense strands have a length ratio of 19/21, 21
- the siRNA comprises one or two blunt ends.
- the siRNA comprises an overhang with 1 to 4 unpaired nucleotides, eg, 1, 2, 3, 4.
- the siRNA comprises an overhang located 3' to the antisense strand.
- the sense strand comprises or is selected from a nucleotide sequence (5'-3') represented by the following formula:
- each X is independently Na or N b ; Na is a 2'-methoxy-modified nucleotide, and N b is a 2'-fluoro-modified nucleotide.
- the sense strand comprises or is selected from a nucleotide sequence (5'-3') represented by the following formula:
- N a is a 2'-methoxy-modified nucleotide
- N b is a 2'-fluoro-modified nucleotide
- the antisense strand contains or is selected from a nucleotide sequence (5'-3') as shown in the following formula:
- N a ' is a 2'-methoxy-modified nucleotide
- N b ' is a 2'-fluoro-modified nucleotide
- W' means that it contains the chemical modification shown in formula (I), its interconversion Isomer-modified nucleotides or pharmaceutically acceptable salts thereof.
- W' represents a nucleotide comprising a chemical modification represented by formula (I), a tautomer or a pharmaceutically acceptable salt thereof.
- the chemical modification shown in formula (I) is selected from:
- B is selected from guanine, adenine, cytosine and uracil; in some specific embodiments, the base between B and the 7th nucleotide at the 5' end of the antisense strand is not modified same.
- the chemical modification shown in formula (I) is selected from:
- M is O or S;
- B is selected from guanine, adenine, cytosine or uracil;
- the acid is the same as the base when it is not modified.
- M is S. In some specific embodiments, M is O.
- At least one phosphate group in the sense strand and/or the antisense strand is a phosphate group with a modification group that allows the siRNA to have an increased stability; in some embodiments, the phosphate group having a modifying group is a phosphorothioate group. In some embodiments, the phosphate group with a modifying group is a phosphorothioate group.
- the phosphorothioate group is present in at least one of the following positions:
- the sense strand and/or antisense strand include multiple phosphorothioate groups present in:
- the sense strand comprises a nucleotide sequence represented by the following formula:
- Nm represents any nucleotide modified by 2'-methoxy, such as C, G, U, A modified by 2'-methoxy
- Nf represents any nucleotide modified by 2'-fluoro, such as 2 '- Fluoro-modified C, G, U, A;
- connection between the lowercase letter s and the two nucleotides adjacent to the left and right of the letter s is a phosphorothioate group.
- the antisense strand comprises a nucleotide sequence represented by the following formula:
- Nm' represents any nucleotide modified by 2'-methoxy group, such as C, G, U, A modified by 2'-methoxy group
- Nf' represents any nucleotide modified by 2'-fluoro group, For example, 2'-fluoro modified C, G, U, A;
- W' represents a modified nucleotide comprising a chemical modification represented by formula (I), its tautomer or a pharmaceutically acceptable salt thereof.
- the chemical modification represented by formula (I) is selected from:
- B is selected from guanine, adenine, cytosine and uracil; in some embodiments, B is the same as the base when the 7th nucleotide at the 5' end of the antisense strand is not modified.
- the chemical modification shown in formula (I) is selected from:
- M is O or S;
- B is selected from guanine, adenine, cytosine or uracil;
- the acid is the same as the base when it is not modified.
- M is S. In some specific embodiments, M is O.
- the siRNA is an siRNA targeting the 17 ⁇ -hydroxysteroid dehydrogenase type 13 (HSD17B13) gene.
- the nucleotide sequence of the sense strand of the siRNA comprises at least 15 nucleotide sequences that differ by no more than 3 nucleotides from any of the nucleotide sequences of SEQ ID NO: 1 to SEQ ID NO: 8. consecutive nucleotides, and/or,
- the nucleotide sequence of the antisense strand comprises at least 19 consecutive nucleotides differing by no more than 3 nucleotides from the nucleotide sequence of any one of SEQ ID NO: 9 to SEQ ID NO: 12.
- the nucleotide sequence of the sense strand of the siRNA comprises any one of the nucleotide sequences of SEQ ID NO:1 to SEQ ID NO:8, and/or, the nucleosides of the antisense strand
- the acid sequence comprises any one nucleotide sequence in SEQ ID NO:9 to SEQ ID NO:12;
- nucleotide sequence of the siRNA is any one of the following schemes:
- the nucleotide sequence of the sense strand comprises the nucleotide sequence of SEQ ID NO:8, and the nucleotide sequence of the antisense strand comprises the nucleotide sequence of SEQ ID NO:12;
- the nucleotide sequence of the sense strand comprises the nucleotide sequence of SEQ ID NO:6, and the nucleotide sequence of the antisense strand comprises the nucleotide sequence of SEQ ID NO:11;
- the nucleotide sequence of the sense strand comprises the nucleotide sequence of SEQ ID NO:2, and the nucleotide sequence of the antisense strand comprises the nucleotide sequence of SEQ ID NO:9;
- nucleotide sequence of the sense strand comprises the nucleotide sequence of SEQ ID NO:4, and the nucleotide sequence of the antisense strand comprises the nucleotide sequence of SEQ ID NO:10;
- the nucleotide sequence of the sense strand comprises the nucleotide sequence of SEQ ID NO:7, and the nucleotide sequence of the antisense strand comprises the nucleotide sequence of SEQ ID NO:12;
- the nucleotide sequence of the sense strand comprises the nucleotide sequence of SEQ ID NO:5, and the nucleotide sequence of the antisense strand comprises the nucleotide sequence of SEQ ID NO:11;
- the nucleotide sequence of the sense strand comprises the nucleotide sequence of SEQ ID NO:1
- the nucleotide sequence of the antisense strand comprises the nucleotide sequence of SEQ ID NO:9;
- the nucleotide sequence of the sense strand comprises the nucleotide sequence of SEQ ID NO:3, and the nucleotide sequence of the antisense strand comprises the nucleotide sequence of SEQ ID NO:10.
- the siRNA is any of the following:
- the nucleotide sequence of the sense strand is SEQ ID NO:8, and the nucleotide sequence of the antisense strand is SEQ ID NO:12;
- the nucleotide sequence of the sense strand is SEQ ID NO:6, and the nucleotide sequence of the antisense strand is SEQ ID NO:11;
- the nucleotide sequence of the sense strand is SEQ ID NO:2, and the nucleotide sequence of the antisense strand is SEQ ID NO:9;
- nucleotide sequence of the sense strand is SEQ ID NO:4, and the nucleotide sequence of the antisense strand is SEQ ID NO:10;
- the nucleotide sequence of the sense strand is SEQ ID NO:7, and the nucleotide sequence of the antisense strand is SEQ ID NO:12;
- nucleotide sequence of the sense strand is SEQ ID NO:5
- nucleotide sequence of the antisense strand is SEQ ID NO:11;
- nucleotide sequence of the sense strand is SEQ ID NO: 1
- nucleotide sequence of the antisense strand is SEQ ID NO: 9; or
- the nucleotide sequence of the sense strand is SEQ ID NO:3, and the nucleotide sequence of the antisense strand is SEQ ID NO:10.
- the sense strand of the dsRNA comprises the nucleotide sequence shown in any one of SEQ ID NO:13 to SEQ ID NO:20, and/or, the antisense strand comprises SEQ ID NO: 21 to the nucleotide sequence shown in any one of SEQ ID NO:24.
- the dsRNA is any of the following: wherein
- the sense strand comprises the nucleotide sequence shown in SEQ ID NO:20, and the antisense strand comprises the nucleotide sequence shown in SEQ ID NO:24;
- the sense strand comprises the nucleotide sequence shown in SEQ ID NO:18, and the antisense strand comprises the nucleotide sequence shown in SEQ ID NO:23;
- the sense strand comprises the nucleotide sequence shown in SEQ ID NO:14, and the antisense strand comprises the nucleotide sequence shown in SEQ ID NO:21;
- the sense strand comprises the nucleotide sequence shown in SEQ ID NO:16, and the antisense strand comprises the nucleotide sequence shown in SEQ ID NO:22;
- the sense strand comprises the nucleotide sequence shown in SEQ ID NO:19, and the antisense strand comprises the nucleotide sequence shown in SEQ ID NO:24;
- the sense strand comprises the nucleotide sequence shown in SEQ ID NO:17, and the antisense strand comprises the nucleotide sequence shown in SEQ ID NO:23;
- the sense strand comprises the nucleotide sequence shown in SEQ ID NO:13, and the antisense strand comprises the nucleotide sequence shown in SEQ ID NO:21;
- the sense strand comprises the nucleotide sequence shown in SEQ ID NO:15
- the antisense strand comprises the nucleotide sequence shown in SEQ ID NO:22.
- the dsRNA is any of the following:
- the sense strand is the nucleotide sequence shown in SEQ ID NO:20, and the antisense strand is the nucleotide sequence shown in SEQ ID NO:24;
- the sense strand is the nucleotide sequence shown in SEQ ID NO:18, and the antisense strand is the nucleotide sequence shown in SEQ ID NO:23;
- the sense strand is the nucleotide sequence shown in SEQ ID NO:14, and the antisense strand is the nucleotide sequence shown in SEQ ID NO:21;
- the sense strand is the nucleotide sequence shown in SEQ ID NO:16, and the antisense strand is the nucleotide sequence shown in SEQ ID NO:22;
- the sense strand is the nucleotide sequence shown in SEQ ID NO:19, and the antisense strand is the nucleotide sequence shown in SEQ ID NO:24;
- the sense strand is the nucleotide sequence shown in SEQ ID NO:17, and the antisense strand is the nucleotide sequence shown in SEQ ID NO:23;
- the sense strand is the nucleotide sequence shown in SEQ ID NO:13, and the antisense strand is the nucleotide sequence shown in SEQ ID NO:21;
- the sense strand is the nucleotide sequence shown in SEQ ID NO:15
- the antisense strand is the nucleotide sequence shown in SEQ ID NO:22.
- the dsRNA is any of the following: wherein
- the sense strand comprises SEQ ID NO:20, and the antisense strand comprises SEQ ID NO:24;
- the sense strand comprises SEQ ID NO:18, and the antisense strand comprises SEQ ID NO:23;
- the sense strand comprises SEQ ID NO:14, and the antisense strand comprises SEQ ID NO:21;
- the sense strand comprises SEQ ID NO:16, and the antisense strand comprises SEQ ID NO:22;
- the sense strand comprises SEQ ID NO:19, and the antisense strand comprises SEQ ID NO:24;
- the sense strand comprises SEQ ID NO:17, and the antisense strand comprises SEQ ID NO:23;
- the sense strand comprises SEQ ID NO:13, and the antisense strand comprises SEQ ID NO:21;
- the sense strand comprises SEQ ID NO:15 and the antisense strand comprises SEQ ID NO:22.
- the dsRNA is any of the following:
- the sense strand is selected from SEQ ID NO:20, and the antisense strand is selected from SEQ ID NO:24;
- the sense strand is selected from SEQ ID NO:18, and the antisense strand is selected from SEQ ID NO:23;
- the sense strand is selected from SEQ ID NO:14, and the antisense strand is selected from SEQ ID NO:21;
- the sense strand is selected from SEQ ID NO:16, and the antisense strand is selected from SEQ ID NO:22;
- the sense strand is selected from SEQ ID NO:19, and the antisense strand is selected from SEQ ID NO:24;
- the sense strand is selected from SEQ ID NO:17, and the antisense strand is selected from SEQ ID NO:23;
- the sense strand is selected from SEQ ID NO:13, and the antisense strand is selected from SEQ ID NO:21;
- the sense strand is selected from SEQ ID NO:15 and the antisense strand is selected from SEQ ID NO:22.
- the dsRNA is any of the following:
- SEQ ID NO: 13 is
- SEQ ID NO: 14 is
- SEQ ID NO:15 is N-(SEQ ID NO:15).
- SEQ ID NO: 16 is
- SEQ ID NO: 17 is
- SEQ ID NO: 18 is
- SEQ ID NO: 19 is N-(SEQ ID NO: 19
- SEQ ID NO:20 is N-(SEQ ID NO:20).
- SEQ ID NO:24 is N-(SEQ ID NO:24)
- s means that the two nucleotides adjacent to the left and right of the letter s are connected by phosphorothioate groups
- the dsRNA is selected from the following structures or pharmaceutically acceptable salts thereof:
- the pharmaceutically acceptable salts can be conventional salts in the art, including but not limited to: sodium salts, potassium salts, ammonium salts, amine salts and the like.
- the dsRNA is selected from TRD008007, TRD008008, TRD008009, TRD008010, TRD008007-1, TRD008008-1, TRD008009-1, or TRD008010-1;
- the dsRNA is TRD008007, which has the following structure:
- the dsRNA is TRD008007-1, which has the following structure:
- the dsRNA is TRD008008, which has the following structure:
- the dsRNA is TRD008008-1, which has the following structure:
- the dsRNA is TRD008009, which has the following structure:
- the dsRNA is TRD008009-1, which has the following structure:
- the dsRNA is TRD008010, which has the following structure:
- the dsRNA is TRD008010-1, which has the following structure:
- the present disclosure provides a pharmaceutical composition comprising the dsRNA described in the present disclosure.
- the pharmaceutical composition further comprises one or more pharmaceutically acceptable excipients.
- Various delivery systems are known and can be used for the dsRNA or pharmaceutical compositions of the present disclosure, such as encapsulation in liposomes, microparticles, microcapsules, recombinant cells capable of expressing the compound, receptor-mediated intracellular Endocytosis, construction of nucleic acids as part of retroviral or other vectors.
- the administration of the dsRNA or pharmaceutical composition of the present disclosure is conventional, and may be administered locally (e.g., by direct injection or implantation) or systemically, or orally, rectally, or gastrointestinally.
- the parenteral route includes but not limited to subcutaneous injection, intravenous injection, intramuscular injection, intraperitoneal injection, transdermal administration, inhalation administration (such as aerosol), mucosal administration (such as sublingual, nasal intracranial administration), intracranial administration, etc.
- a dsRNA or pharmaceutical composition provided herein can be administered by injection, eg, intravenous, intramuscular, intradermal, subcutaneous, intraduodenal, or intraperitoneal injection.
- the dsRNA or pharmaceutical compositions provided by the present disclosure can be packaged in kits.
- the present disclosure provides an application of the dsRNA described in the present disclosure or the pharmaceutical composition described in the present disclosure in the preparation of medicine.
- the medicament can be used to prevent and/or treat hepatitis, liver fibrosis, nonalcoholic steatohepatitis (NASH), nonalcoholic fatty liver disease (NAFLD), liver cirrhosis, alcoholic steatohepatitis Hepatitis (ASH), alcoholic fatty liver disease (ALD), HCV-related cirrhosis, drug-induced liver injury, or hepatocyte necrosis.
- NASH nonalcoholic steatohepatitis
- NAFLD nonalcoholic fatty liver disease
- ASH alcoholic steatohepatitis Hepatitis
- ALD alcoholic fatty liver disease
- HCV-related cirrhosis drug-induced liver injury, or hepatocyte necrosis.
- the medicament can be used to prevent and/or treat diseases related to HSD17B13 gene expression.
- the diseases associated with HSD17B13 gene expression can be hepatitis, liver fibrosis, nonalcoholic steatohepatitis (NASH), nonalcoholic fatty liver disease (NAFLD), liver cirrhosis, alcoholic fatty Acute hepatitis (ASH), alcoholic fatty liver disease (ALD), HCV-related cirrhosis, drug-induced liver injury, or hepatocyte necrosis.
- the disease associated with HSD17B13 gene expression may be chronic fibrotic liver disease.
- the chronic fibrotic liver disease is associated with accumulation and/or expansion of lipid droplets in the liver.
- the effective amount or effective dose of the dsRNA or pharmaceutical composition is about 0.001 mg/kg body weight to about 200 mg/kg body weight, about 0.01 mg/kg body weight to about 100 mg/kg body weight, or about 0.5 mg /kg body weight to about 50 mg/kg body weight.
- the present disclosure provides a use of the dsRNA described in the present disclosure or the pharmaceutical composition described in the present disclosure in the preparation of a medicament for preventing and/or treating a disease in a subject.
- the disease may be hepatitis, liver fibrosis, nonalcoholic steatohepatitis (NASH), nonalcoholic fatty liver disease (NAFLD), liver cirrhosis, alcoholic steatohepatitis (ASH), Alcoholic fatty liver disease (ALD), HCV-related cirrhosis, drug-induced liver injury, or hepatocyte necrosis.
- NASH nonalcoholic steatohepatitis
- NAFLD nonalcoholic fatty liver disease
- ASH alcoholic steatohepatitis
- ALD Alcoholic fatty liver disease
- HCV-related cirrhosis drug-induced liver injury
- hepatocyte necrosis hepatocyte necrosis
- the disease may be a disease associated with HSD17B13 gene expression.
- the diseases associated with HSD17B13 gene expression can be hepatitis, liver fibrosis, nonalcoholic steatohepatitis (NASH), nonalcoholic fatty liver disease (NAFLD), liver cirrhosis, alcoholic fatty Acute hepatitis (ASH), alcoholic fatty liver disease (ALD), HCV-related cirrhosis, drug-induced liver injury, or hepatocyte necrosis.
- the disease associated with HSD17B13 gene expression may be chronic fibrotic liver disease.
- the chronic fibrotic liver disease is associated with accumulation and/or expansion of lipid droplets in the liver.
- the present disclosure provides a method for preventing and/or treating a disease, which comprises administering to a subject an effective amount or dose of the dsRNA described in the present disclosure or the pharmaceutical composition described in the present disclosure.
- the disease may be hepatitis, liver fibrosis, nonalcoholic steatohepatitis (NASH), nonalcoholic fatty liver disease (NAFLD), liver cirrhosis, alcoholic steatohepatitis (ASH), Alcoholic fatty liver disease (ALD), HCV-related cirrhosis, drug-induced liver injury, or hepatocyte necrosis.
- NASH nonalcoholic steatohepatitis
- NAFLD nonalcoholic fatty liver disease
- ASH alcoholic steatohepatitis
- ALD Alcoholic fatty liver disease
- HCV-related cirrhosis drug-induced liver injury
- hepatocyte necrosis hepatocyte necrosis
- the disease may be a disease associated with HSD17B13 gene expression.
- the diseases associated with HSD17B13 gene expression can be hepatitis, liver fibrosis, nonalcoholic steatohepatitis (NASH), nonalcoholic fatty liver disease (NAFLD), liver cirrhosis, alcoholic fatty Acute hepatitis (ASH), alcoholic fatty liver disease (ALD), HCV-related cirrhosis, drug-induced liver injury, or hepatocyte necrosis.
- the disease associated with HSD17B13 gene expression may be chronic fibrotic liver disease.
- the chronic fibrotic liver disease is associated with accumulation and/or expansion of lipid droplets in the liver.
- the present disclosure provides a method for silencing HSD17B13 or its mRNA in a cell in vivo or in vitro, comprising introducing the dsRNA described in the present disclosure or the pharmaceutical composition described in the present disclosure into the cell step.
- the present disclosure provides a method for inhibiting the expression of the target gene HSD17B13 or its mRNA, which comprises administering to a subject an effective amount or dose of the dsRNA described in the present disclosure or the pharmaceutical composition described in the present disclosure.
- the dsRNA or pharmaceutical composition of the present disclosure can reduce the expression level of the target gene or its mRNA in cells, cell groups, tissues or subjects, including: administering a therapeutically effective amount of the dsRNA or pharmaceutical combination described herein to the object substances, thereby inhibiting the expression of the target gene or its mRNA in the subject.
- the subject has been previously identified as having pathological upregulation of the target gene HSD17B13 or mRNA thereof in the targeted cell, cell population, tissue or subject.
- the present disclosure provides a method of delivering an oligonucleotide to the liver, which comprises administering to a subject an effective amount or dose of the dsRNA described in the present disclosure or the pharmaceutical composition described in the present disclosure.
- the present disclosure provides an RNAi (RNA interference) agent comprising the dsRNA described in the present disclosure or the pharmaceutical composition described in the present disclosure.
- RNAi RNA interference
- the present disclosure also provides a cell comprising the dsRNA described in the present disclosure or the pharmaceutical composition described in the present disclosure.
- the present disclosure also provides a kit comprising the dsRNA described in the present disclosure or the pharmaceutical composition described in the present disclosure.
- the dsRNA or pharmaceutical composition of the present disclosure when contacted with cells expressing the target gene, is detected by, for example: psiCHECK activity screening and luciferase reporter gene assay, other methods such as PCR or based on branched DNA (bDNA) , or protein-based methods, such as immunofluorescence analysis, such as Western Blot or flow cytometry, the dsRNA or pharmaceutical composition of the present disclosure can inhibit the expression of the target gene by at least 5%, at least 10%, at least 15% , at least 20%, at least 25%, at least 30%, at least 35%, at least 40%, at least 45%, at least 50%, at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99%.
- the dsRNA or pharmaceutical composition of the present disclosure when contacted with cells expressing the target gene, is detected by, for example: psiCHECK activity screening and luciferase reporter gene assay, other methods such as PCR or based on branched DNA (bDNA) , or protein-based methods, such as immunofluorescence analysis, such as Western Blot or flow cytometry, the remaining expression percentage of the target gene mRNA caused by the dsRNA or the pharmaceutical composition of the present disclosure is not higher than 99%, not high Not higher than 95%, not higher than 90%, not higher than 85%, not higher than 80%, not higher than 75%, not higher than 70%, not higher than 65%, not higher than 60%, not higher than 55% %, not higher than 50%, not higher than 45%, not higher than 40%, not higher than 35%, not higher than 30%, not higher than 25%, not higher than 20%, not higher than 15%, or not higher than 10%.
- psiCHECK activity screening and luciferase reporter gene assay other methods
- the dsRNA or pharmaceutical composition of the present disclosure when contacted with cells expressing the target gene, is detected by, for example: psiCHECK activity screening and luciferase reporter gene assay, other methods such as PCR or based on branched DNA (bDNA) , or protein-based methods, such as immunofluorescence assays, e.g., Western Blot, or flow cytometry, the dsRNA reduces off-target activity by at least 20%, at least 25%, or at least 30%, while maintaining on-target activity , at least 35%, at least 40%, at least 45%, at least 50%, at least 55%, at least 60%, at least 65%, at least 70%, or at least 75%.
- psiCHECK activity screening and luciferase reporter gene assay other methods such as PCR or based on branched DNA (bDNA) , or protein-based methods, such as immunofluorescence assays, e.g., Western Blot, or flow cytometry
- the dsRNA or pharmaceutical composition of the present disclosure when contacted with cells expressing the target gene, is detected by, for example: psiCHECK activity screening and luciferase reporter gene assay, other methods such as PCR or based on branched DNA (bDNA) , or protein-based methods, such as immunofluorescence assays, such as Western Blot, or flow cytometry, dsRNA reduces on-target activity by up to 20%, up to 19%, up to 15%, up to 10%, up to 5% or more than 1%, while reducing off-target activity by at least 20%, at least 25%, at least 30%, at least 35%, at least 40%, at least 45%, at least 50%, at least 55%, at least 60%, at least 65% %, at least 70%, or at least 75%.
- psiCHECK activity screening and luciferase reporter gene assay other methods such as PCR or based on branched DNA (bDNA) , or protein-based methods, such as immunofluorescence as
- dsRNA when the dsRNA or the pharmaceutical composition of the present disclosure contacts the cells expressing the target gene, it can be detected by, for example, psiCHECK activity screening and luciferase reporter gene detection method, other methods such as PCR or based on branched DNA (bDNA) , or protein-based methods, such as immunofluorescence assays, e.g., Western Blot, or flow cytometry, dsRNA increases on-target activity by at least 1%, at least 5%, at least 10%, at least 15%, at least 20% , at least 25%, at least 30%, at least 35%, at least 40%, at least 45%, at least 50%, at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, or at least 80% , reducing off-target activity by at least 20%, at least 25%, at least 30%, at least 35%, at least 40%, at least 45%, at least 50%, at least 55%, at least 60%, at least 65%, at least 70%, or At
- the present disclosure also provides a method for preparing dsRNA or a pharmaceutical composition, which includes: synthesizing the ligand, siRNA, dsRNA or pharmaceutical composition described in the present disclosure.
- Compounds of the present disclosure may exist in particular geometric or stereoisomeric forms. This disclosure contemplates all such compounds, including cis and trans isomers, (-)- and (+)-enantiomers, (R)- and (S)-enantiomers, diastereomers isomers, (D)-isomers, (L)-isomers, and their racemic and other mixtures, such as enantiomerically or diastereomerically enriched mixtures, all of which are within the scope of this disclosure. Additional asymmetric carbon atoms may be present in substituents such as alkyl groups. All such isomers, as well as mixtures thereof, are included within the scope of this disclosure. Compounds of the present disclosure containing asymmetric carbon atoms can be isolated in optically pure or racemic forms. Optically pure forms can be resolved from racemic mixtures or synthesized by using chiral starting materials or reagents.
- Optically active (R)- and (S)-isomers as well as D and L-isomers can be prepared by chiral synthesis or chiral reagents or other conventional techniques. If one enantiomer of a compound of the present disclosure is desired, it can be prepared by asymmetric synthesis or derivatization with chiral auxiliary agents, wherein the resulting diastereomeric mixture is separated and the auxiliary group is cleaved to provide pure desired enantiomer.
- a diastereoisomeric salt is formed with an appropriate optically active acid or base, and then a diastereomeric salt is formed by a conventional method known in the art. Diastereomeric resolution is performed and the pure enantiomers are recovered. Furthermore, the separation of enantiomers and diastereomers is usually accomplished by the use of chromatography using chiral stationary phases, optionally in combination with chemical derivatization methods (e.g. amines to amino groups formate).
- the bond Indicates unassigned configuration, i.e. if chiral isomers exist in the chemical structure, the bond can be or or both and Two configurations.
- the bond configuration is not specified, i.e. the key The configuration of can be E type or Z type, or contain both E and Z configurations.
- tautomer or "tautomeric form” refers to structural isomers of different energies that can interconvert via a low energy barrier.
- proton tautomers also known as prototropic tautomers
- lactam-lactim isomerization
- An example of a lactam-lactim equilibrium is between A and B as shown below.
- the present disclosure also includes certain isotopically labeled compounds of the disclosure that are identical to those described herein, but wherein one or more atoms are replaced by an atom of an atomic mass or mass number different from that normally found in nature.
- isotopes that can be incorporated into compounds of the present disclosure include isotopes of hydrogen, carbon, nitrogen, oxygen, phosphorus, sulfur, fluorine, iodine, and chlorine, such as 2 H, 3 H, 11 C, 13 C, 14 C, 13 N, 15 N, 15 O, 17 O, 18 O, 31 P, 32 P, 35 S, 18 F, 123 I, 125 I and 36 Cl, etc.
- deuterium when a position is specifically designated as deuterium (D), the position is understood to have an abundance of deuterium (i.e., at least 10 % deuterium incorporation).
- exemplary compounds having a natural abundance greater than deuterium can be at least 1000 times more abundant deuterium, at least 2000 times more abundant deuterium, at least 3000 times more abundant deuterium, at least 4000 times more abundant deuterium, at least 5000 times more abundant deuterium, at least 6000 times more abundant deuterium, or more abundant deuterium.
- the present disclosure also includes compounds of Formula (I), Formula (I'), Formula (II) in various deuterated forms. Each available hydrogen atom attached to a carbon atom can be independently replaced by a deuterium atom.
- deuterated starting materials can be used when preparing deuterated forms of compounds of formula (I), formula (I'), and formula (II), or they can be synthesized using conventional techniques using deuterated reagents, including But not limited to deuterated borane, trideuterioborane tetrahydrofuran solution, deuterated lithium aluminum hydride, deuterated ethyl iodide and deuterated methyl iodide, etc.
- HSD17B13 refers to type 13 17 ⁇ hydroxysteroid dehydrogenase, a member of the 17 ⁇ hydroxysteroid dehydrogenase (hsd17b) family, which catalyzes the conversion between 17-keto- and 17-hydroxysteroids.
- hsd17b 17 ⁇ hydroxysteroid dehydrogenase
- Members of this family have various functions including, for example, the reduction or oxidation of sex hormones, fatty acids, and bile acids in vivo.
- Members of the hsd17b family differ in their tissue distribution, subcellular localization, catalytic priority, and because they also catalyze the conversion of other substrates than steroids (such as lipids and retinoids), they have different substrate specificities .
- HSD17B13 is mainly expressed in the liver and localized on the surface of lipid droplets (LDs).
- LDs lipid droplets
- HSD17B13 protein expression was significantly upregulated in fatty liver LDs.
- HSD17B13 protein was overexpressed it led to an increase in the number and size of LDs in hepatocytes, and significantly increased hepatic lipogenesis and triglyceride (TG) content.
- TG hepatic lipogenesis and triglyceride
- NAFLD nonalcoholic fatty liver disease
- NASH nonalcoholic steatohepatitis
- HSD17B13 Loss-of-function mutants of HSD17B13 (rs72613567:TA) reduce alanine aminotransferase (ALT) and aspartate aminotransferase (AST) levels, while reducing inflammation and liver injury in fatty liver patients.
- HSD17B13 has been shown to be associated with a variety of liver diseases, including but not limited to hepatitis, liver fibrosis, nonalcoholic steatohepatitis, nonalcoholic fatty liver disease, cirrhosis, alcoholic steatohepatitis, alcoholic fatty liver disease, HCV- Associated cirrhosis, drug-induced liver injury or hepatocellular necrosis, or chronic fibroinflammatory liver disease.
- the HSD17B13 sequence includes: GENBANK accession number NM_001136230.3, GENBANK accession number NM_001136230.3,
- the sense strand also known as SS, SS strand or sense strand
- the antisense strand also known as AS or AS strand
- AS or AS strand refers to the strand that has a sequence that is complementary to the target mRNA sequence.
- the "5' region” of the sense strand or the antisense strand can be used interchangeably.
- the 2nd to 8th nucleotides in the 5' region of the antisense strand can also be replaced with the 2nd to 8th nucleotides at the 5' end of the antisense strand.
- the "3' region”, “3' end” and “3' end” of the sense strand or the antisense strand can also be used interchangeably.
- the term "differs from the nucleotide sequence of any one of SEQ ID NO: 1 to SEQ ID NO: 8 by no more than 3 nucleotides and contains at least 15 consecutive Nucleotide” is intended to mean that the siRNA sense strand described herein comprises at least 15 consecutive nucleotides of any sense strand in SEQ ID NO: 1 to SEQ ID NO: 8, or with SEQ ID NO: 1 to SEQ ID NO: At least 15 consecutive nucleotides of any sense strand in ID NO:8 differ by no more than 3 nucleotide sequences (optionally, differ by no more than 2 nucleotide sequences; optionally, differ by 1 nucleoside acid sequences).
- the siRNA sense strand described herein comprises at least 16 contiguous nucleotides of any sense strand of SEQ ID NO: 1 to SEQ ID NO: 8, or is identical to any of SEQ ID NO: 1 to SEQ ID NO: 8 At least 16 contiguous nucleotides of a sense strand differ by no more than 3 nucleotide sequences (optionally, differ by no more than 2 nucleotide sequences, optionally, differ by 1 nucleotide sequence).
- the term "differs from any antisense strand of SEQ ID NO: 9 to SEQ ID NO: 12 by no more than 3 nucleotide sequences and contains at least 15 consecutive core Nucleotide” is intended to mean that the siRNA antisense strand described herein comprises at least 15 consecutive nucleotides of any antisense strand in SEQ ID NO: 9 to SEQ ID NO: 12, or with SEQ ID NO: 9 to At least 15 consecutive nucleotides of any antisense strand in SEQ ID NO: 12 differ by no more than 3 nucleotide sequences (optionally, differ by no more than 2 nucleotide sequences, optionally, differ by 1 Nucleotide sequence).
- G", “C”, “A”, “T” and “U” respectively represent nucleotides, which respectively contain guanine, cytosine, adenine, thymidine
- the nucleotides are linked by phosphorothioate groups.
- 2'-fluoro (2'-F) modified nucleotide refers to a nucleotide in which the hydroxyl group at the 2' position of the ribose group of the nucleotide is replaced by fluorine
- non-fluorine Modified nucleotides refer to nucleotides or nucleotide analogues in which the hydroxyl group at the 2' position of the ribose group of a nucleotide is replaced by a non-fluorine group.
- dsRNA refers to a double-stranded RNA molecule capable of RNA interference, comprising a sense strand and an antisense strand.
- the terms "complementary” or “reverse complementary” are used interchangeably and have the meaning known to those skilled in the art, that is, in a double-stranded nucleic acid molecule, the bases of one strand interact with the other. The bases on the strand pair up in a complementary fashion.
- the purine base adenine (A) is always paired with the pyrimidine base thymine (T) (or uracil (U) in RNA);
- the purine base guanine (C) is always paired with the pyrimidine base Cytosine (G) is paired.
- Each base pair consists of a purine and a pyrimidine.
- mismatch in the art means that in a double-stranded nucleic acid, the bases at the corresponding positions are not paired in a complementary form.
- chemical modification includes all alterations of nucleotides by chemical means, such as the addition or removal of chemical moieties, or the substitution of one chemical moiety for another.
- base includes any known DNA and RNA base, base analogs such as purine or pyrimidine, which also includes the natural compounds adenine, thymine, guanine, cytosine, uracil, inosine and Natural analogs. Base analogs can also be universal bases.
- blunt end or blunt end are used interchangeably and refer to the absence of unpaired nucleotides or nucleotide analogs at a given end of an siRNA, ie, no nucleotide overhangs. In most cases, siRNAs with both blunt-ended ends will be double-stranded throughout their entire length.
- the siRNA and dsRNA provided in the present disclosure can be obtained by conventional preparation methods in the art (such as methods of solid-phase synthesis and liquid-phase synthesis). Among them, solid-phase synthesis has commercialized customized services.
- a modified nucleotide group can be introduced into the siRNA described in the present disclosure by using a correspondingly modified nucleoside monomer, a method for preparing a correspondingly modified nucleoside monomer and introducing a modified nucleotide group
- the methods of siRNA and dsRNA are also well known to those skilled in the art.
- the term “comprising” or “comprising” means including stated elements, integers or steps, but not excluding any other elements, integers or steps.
- the term “comprising” or “comprises” is used, unless otherwise specified, it also covers the situation consisting of the mentioned elements, integers or steps.
- a reference is made to “comprising” a specific sequence it is also intended to cover the situation consisting of that specific sequence.
- the "compound”, “chemical modification”, “ligand”, “dsRNA”, “nucleic acid” and “RNAi” of the present disclosure can be independently salt, mixed salt or non-salt (such as free acid or in the form of the free base).
- a salt or mixed salt it may be a pharmaceutically acceptable salt.
- “Pharmaceutically acceptable salt” may be selected from inorganic salts or organic salts, and may also include pharmaceutically acceptable acid addition salts and pharmaceutically acceptable base addition salts.
- “Pharmaceutically acceptable acid addition salt” refers to a salt formed with an inorganic or organic acid that retains the biological effectiveness of the free base without other side effects.
- Inorganic acid salts include but not limited to hydrochloride, hydrobromide, sulfate, nitrate, phosphate, etc.
- organic acid salts include but not limited to formate, acetate, 2,2-dichloroacetate , Trifluoroacetate, Propionate, Caproate, Caprylate, Caprate, Undecylenate, Glycolate, Gluconate, Lactate, Sebacate, Hexanoate glutarate, malonate, oxalate, maleate, succinate, fumarate, tartrate, citrate, palmitate, stearate, oleate , cinnamate, laurate, malate, glutamate, pyroglutamate, aspartate, benzoate, mesylate, benzenesulfonate, p
- “Pharmaceutically acceptable base addition salt” refers to a salt formed with an inorganic base or an organic base that can maintain the biological effectiveness of the free acid without other side effects.
- Salts derived from inorganic bases include, but are not limited to, sodium, potassium, lithium, ammonium, calcium, magnesium, iron, zinc, copper, manganese, aluminum, and the like.
- Preferred inorganic salts are ammonium, sodium, potassium, calcium and magnesium salts, preferably sodium salts.
- Salts derived from organic bases include, but are not limited to, those of primary, secondary, and tertiary amines, substituted amines, including natural substituted amines, cyclic amines, and basic ion exchange resins , such as ammonia, isopropylamine, trimethylamine, diethylamine, triethylamine, tripropylamine, ethanolamine, diethanolamine, triethanolamine, dimethylethanolamine, 2-dimethylaminoethanol, 2-diethylaminoethanol, bicyclic Hexylamine, Lysine, Arginine, Histidine, Caffeine, Procaine, Choline, Betaine, Ethylenediamine, Glucosamine, Methylglucamine, Theobromine, Purine, Piperazine, Piperazine Pyridine, N-ethylpiperidine, polyamine resin, etc.
- Preferred organic bases include isopropylamine, diethylamine, ethanolamine, trimethylamine,
- Alkyl refers to a saturated aliphatic hydrocarbon group, such as straight chain and branched chain groups (C 1 -C 30 alkyl groups) including 1 to 30 carbon atoms, and for example, alkyl groups containing 1 to 6 carbon atoms (C 1 -C 6 alkyl), another example is an alkyl (C 1 -C 3 alkyl) having 1 to 3 carbon atoms.
- Non-limiting examples include methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, tert-butyl, sec-butyl, n-pentyl, 1,1-dimethylpropyl, 1,2-dimethylpropyl, 2,2-dimethylpropyl and various branched isomers, etc.
- alkenyl refers to a hydrocarbon group containing at least one double bond.
- alkenyl include, but are not limited to, ethenyl, 1-propenyl, 2-propenyl, 1-butenyl, or 2-butenyl, and various branched isomers thereof.
- alkynyl refers to a hydrocarbon group containing at least one triple bond.
- alkynyl include, but are not limited to, ethynyl, 1-propynyl, 2-propynyl, 1-butynyl, or 2-butynyl, and various branched isomers thereof.
- alkoxy refers to -O-(alkyl), wherein alkyl is as defined above.
- alkoxy include: methoxy, ethoxy, propoxy, butoxy.
- Cycloalkyl refers to a saturated or partially unsaturated monocyclic or polycyclic cyclic hydrocarbon substituent, the cycloalkyl ring contains 3 to 20 carbon atoms, preferably contains 3 to 6 carbon atoms, more preferably contains 5-6 carbon atom.
- monocyclic cycloalkyls include cyclopropyl, cyclobutyl, cyclopentyl, cyclopentenyl, cyclohexyl, cyclohexenyl, cyclohexadienyl, etc.; multicyclic cycloalkyls include spiro Cycloalkyls of rings, parallel rings and bridged rings.
- Heterocycloalkyl means a saturated or partially unsaturated monocyclic or polycyclic cyclic hydrocarbon substituent containing 3 to 20 ring atoms, one or more of which is selected from nitrogen, oxygen or S(O) m (where m is an integer from 0 to 2), but excluding ring portions of -OO-, -OS- or -SS-, the remaining ring atoms being carbon. Preferably it contains 3 to 12 ring atoms, of which 1 to 4 are heteroatoms; more preferably it contains 3 to 7 ring atoms.
- Non-limiting examples of “heterocycloalkyl” include:
- heterocycloalkyl ring may be fused to an aryl or heteroaryl ring, wherein the ring bonded to the parent structure is a heterocycloalkyl, non-limiting examples of which include:
- Aryl means a 6 to 14 membered all-carbon monocyclic or fused polycyclic (that is, rings sharing adjacent pairs of carbon atoms) group, preferably 6 to 12 membered, having a conjugated pi-electron system, such as phenyl and naphthyl.
- the aryl ring may be fused to a heteroaryl, heterocycloalkyl or cycloalkyl ring, where the ring bonded to the parent structure is an aryl ring, non-limiting examples of which include:
- Heteroaryl refers to a heteroaromatic system comprising 1 to 4 heteroatoms, 5 to 14 ring atoms, wherein the heteroatoms are selected from oxygen, sulfur and nitrogen.
- the heteroaryl group is preferably 6 to 12 membered, more preferably 5 or 6 membered.
- Non-limiting examples thereof include: imidazolyl, furyl, thienyl, thiazolyl, pyrazolyl, oxazolyl, isoxazolyl, pyrrolyl, tetrazolyl, pyridyl, pyrimidinyl , Thiadiazole, pyrazinyl, triazolyl, indazolyl, benzimidazolyl, wait.
- the heteroaryl ring may be fused to an aryl, heterocycloalkyl or cycloalkyl ring, wherein the ring bonded to the parent structure is a heteroaryl ring, non-limiting examples of which include:
- hydroxyl refers to a -OH group.
- halogen refers to fluorine, chlorine, bromine or iodine.
- cyano refers to -CN.
- amino refers to -NH2 .
- nitro refers to -NO2 .
- a "phosphate group” can be a phosphoric acid monoester group, a phosphoric diester group or a phosphoric acid triester group, preferably a phosphoric diester group; Group" has the same meaning.
- phosphorothioate group refers to a phosphodiester group modified by replacing a non-bridging oxygen atom with a sulfur atom, which can be used (M is an S atom) are used interchangeably.
- substitution refers to one or more hydrogen atoms in a group, preferably at most 5, more preferably 1 to 3 hydrogen atoms are independently substituted by a corresponding number of substituents.
- two (2) hydrogens on the atom are replaced.
- group middle A moiety can be replaced by any group that enables linkage to adjacent nucleotides.
- linked when referring to a link between two molecules, means that two molecules are connected by a covalent bond or that two molecules are associated by a non-covalent bond (for example, a hydrogen bond or an ionic bond), including direct connection, indirect connect.
- a non-covalent bond for example, a hydrogen bond or an ionic bond
- directly linked means that a first compound or group is linked to a second compound or group without any intervening atoms or groups of atoms.
- directly linked means that a first compound or group is linked to a second compound or group through an intervening group, compound or molecule (eg, a linking group).
- “Pharmaceutical composition” means a mixture containing one or more compounds described herein, or a physiologically acceptable salt or prodrug thereof, and other chemical components, as well as other components such as physiologically acceptable carriers and excipients. Forming agent.
- the purpose of the pharmaceutical composition is to promote the administration to the organism, facilitate the absorption of the active ingredient and then exert its biological activity.
- “Pharmaceutically acceptable excipients” include, but are not limited to, any adjuvants, carriers, glidants, sweeteners, Diluents, preservatives, dyes/colorants, flavor enhancers, surfactants, wetting agents, dispersing agents, suspending agents, stabilizers, isotonic agents, solvents or emulsifying agents.
- the term “inhibit”, is used interchangeably with “reduce”, “silence”, “downregulate”, “suppress” and other similar terms, and includes any level of inhibition. Inhibition can be assessed by a reduction in the absolute or relative level of one or more of these variables compared to control levels.
- the control level can be any type of control level used in the art, such as a pre-dose baseline level or from a similar untreated or control (eg buffer only or inert control) treated subject, cell , or sample-determined levels.
- the residual expression of mRNA can be used to characterize the inhibition degree of siRNA on target gene expression, such as the remaining expression of mRNA is not higher than 99%, not higher than 95%, not higher than 90%, not higher than 85%, not higher than More than 80%, not more than 75%, not more than 70%, not more than 65%, not more than 60%, not more than 55%, not more than 50%, not more than 45%, not more than 40%, not higher than 35%, not higher than 30%, not higher than 25%, not higher than 20%, not higher than 15%, or not higher than 10%.
- an “effective amount” or “effective dose” includes an amount sufficient to ameliorate or prevent a symptom or condition of a medical condition.
- An effective amount also means an amount sufficient to permit or facilitate diagnosis.
- Effective amounts for a particular patient or veterinary subject may vary depending on factors such as the condition being treated, the general health of the patient, the method, route and dosage of administration, and the severity of side effects.
- An effective amount may be the maximum dose or dosing regimen that avoids significant side effects or toxic effects.
- subject As used in this disclosure, “subject”, “patient”, “subject” or “individual” are used interchangeably and include humans or non-human animals such as mammals such as humans or monkeys.
- Figure 1 shows the remaining mRNA expression levels in TTR of conjugates TRD002218 and TRD007205 on day 7 after administration.
- Figure 2 shows the remaining mRNA expression levels in TTR of conjugates TRD002218 and TRD007205 on day 28 after administration.
- the present disclosure is further described below in conjunction with examples, but these examples do not limit the scope of the present disclosure.
- the experimental methods not indicating the specific conditions in the embodiments of the present disclosure are usually in accordance with conventional conditions or in accordance with the conditions suggested by raw materials or commodity manufacturers.
- Reagents where a specific source is not stated may be obtained from any supplier of molecular biology reagents in quality/purity for molecular biology applications.
- Embodiment 1 Preparation of chemical modification
- Racemate compound 6 was passed through a chiral column (Daicel IE 250*4.6mm, 5 ⁇ m, A: n-hexane, B: ethanol) resolved to obtain 410mg 6A(-) and 435mg 6B(+).
- reaction solution was extracted with ethyl acetate (200mL) and water (200mL), the organic phase was dried and spin-dried, and the mixed sample was purified by a forward column (PE:EtOAc was passed through the column, and the peak was at 84%) to obtain yellow oily compound 7 (12g).
- dsRNA dsRNA
- phosphoramidite monomer synthesized above is used to replace the original nucleotide of the parent sequence.
- a brief description of the synthesis process is as follows: On Dr. Oligo48 synthesizer (Biolytic), start with Universal CPG carrier, and link nucleoside phosphoramidite monomers one by one according to the synthesis procedure.
- nucleoside phosphoramidite monomer at the 5' 7th position of the AS chain described above, other nucleoside monomer raw materials such as 2'-F RNA, 2'-O-methyl RNA and other nucleoside phosphoramidite monomers can be purchased From Shanghai Zhaowei or Suzhou Jima.
- ETT 5-ethylthio-1H-tetrazole
- PADS 0.22M PADS dissolved in acetonitrile and collidine
- the oligoribonucleotide is cleaved from the solid support, and soaked at 50° C. for 16 hours using a 3:1 28% ammonia water and ethanol solution. Then centrifuged, the supernatant was transferred to another centrifuge tube, concentrated and evaporated to dryness, purified by C18 reverse chromatography, the mobile phase was 0.1M TEAA and acetonitrile, and 3% trifluoroacetic acid solution was used to remove DMTr.
- the target oligonucleotides were collected and freeze-dried, identified as the target product by LC-MS, and then quantified by UV (260nm).
- the obtained single-stranded oligonucleotides were annealed according to the equimolar ratio and complementary pairing, and finally the obtained dsRNA was dissolved in 1 ⁇ PBS and adjusted to the required concentration for the experiment.
- Embodiment 4 Characterization of different chemical modifications
- hmpNA from nucleotides synthesized from 2-hydroxymethyl-1,3-propanediol as the starting material
- (+)hmpNA(A) is obtained by solid-phase synthesis of the nucleoside phosphoramidite monomer 1-1b in Example 1.1, and the absolute configuration is (S)-hmpNA(A);
- (-)hmpNA(A) is obtained by solid-phase synthesis of nucleoside phosphoramidite monomer 1-1a in Example 1.1, and its absolute configuration is (R)-hmpNA(A);
- (+)hmpNA(C) the absolute configuration is (S)-hmpNA(C);
- (+)hmpNA(U) the absolute configuration is (R)-hmpNA(U);
- TJ-NA067 The detection crystal is a colorless block (0.30 ⁇ 0.10 ⁇ 0.04mm3), which belongs to the monoclinic crystal system P21 space group.
- the detection crystal is a colorless block (0.30 ⁇ 0.20 ⁇ 0.10mm3), belonging to the monoclinic crystal system P21 space group.
- TJ-NA048 The detected crystal is colorless needle-shaped (0.30 ⁇ 0.04 ⁇ 0.04mm3), belonging to the monoclinic P1 space group.
- GNA modification is known to be siRNA sequence dependent, so the inventors tested the experimental compounds of the present disclosure on a number of different sequences.
- the siRNA (sequence shown in Table 4) targeting three different genes (ANGPTL3, HBV-S, HBV-X) mRNA was used, and the compound (+) hmpNA (A), (-) hmpNA ( A) and the GNA (A) compound as a control modify the 7th position of the 5' end of the AS chain (sequence is shown in Table 5), and compare the on-target activity and off-target activity with the parent sequence.
- uppercase letters G, A, C, and U represent nucleotides containing guanine, adenine, cytosine, and uracil, respectively
- lowercase letter m represents 2'-methoxy modification
- lowercase letter f represents 2 '-Fluoro modification
- when the lowercase letter s is in the middle it means that the two adjacent nucleotides to the left and right of the letter s are connected by a phosphorothioate group
- the lowercase letter s is the first at the 3' end, it means that the A nucleotide terminal adjacent to the left side of the letter s is a phosphorothioate group; the same below.
- Embodiment 6 preparation NAG0052, L96
- the starting material Compound 1 was purchased from Jiangsu Beida Pharmaceutical Technology Co., Ltd.
- TMSCN (13.5mL, 101mmol) was added to a solution of compound 2 (13.0g, 33.6mmol) in DCM (300mL) at one time, followed by dropwise addition of TMSOTf (9.14mL, 50.5mmol) in DCM (30 mL) solution. The reaction solution was stirred at 20°C for 15 hours.
- the compound NAG0024 (271 mg, 0.151 mmol) was dissolved in anhydrous THF (2 mL) and anhydrous DMF (4 mL), and 3A molecular sieves were added, followed by addition of compound 12 (100 mg, 0.151 mmol), HOBt ( 25mg, 0.181mmol), DCC (38mg, 0.181mmol) and DIEA (39mg, 0.302mmol).
- the reaction solution was reacted at 45°C for 16h. After LC-MS showed that the reaction was complete, it was quenched with water and filtered. After the filtrate was concentrated, it was purified by C18 reverse phase column (H 2 O/MeCN) to obtain compound 13 (210 mg, yield 57%).
- the compound NAG0052 (157mg, 0.062mmol) containing a carboxylic acid group was dissolved in anhydrous DMF (3mL). After the substrate was completely dissolved, anhydrous acetonitrile (4mL), DIEA (0.03mL, 0.154mmol, 2.5eq ) and HBTU (35mg, 0.093mmol, 1.5eq). After the reaction solution was mixed evenly, macroporous amine methyl resin (476mg, blank load was 0.41mmol/g, target load was 0.1mmol/g) was added. The reaction solution was placed on a shaker (temperature: 25° C., rotation speed: 200 rpm) and shaken overnight. The reaction liquid was filtered, and the filter cake was washed successively with DCM and anhydrous acetonitrile, and the solid was collected and dried overnight in vacuum.
- anhydrous acetonitrile 4mL
- DIEA 0.03mL, 0.154mmol, 2.5eq
- HBTU
- the above solid was dispersed in anhydrous acetonitrile (5 mL), and pyridine (0.18 mL), DMAP (3 mg), NMI (0.12 mL) and CapB1 (2.68 mL) were added sequentially.
- the reaction solution was placed on a shaker (temperature: 25° C., rotation speed: 200 rpm) and shaken for 2 h.
- the reaction liquid was filtered, and the filter cake was washed with anhydrous acetonitrile, and the solid was collected and vacuum-dried overnight to obtain a resin with a carrier.
- the loading capacity was determined to be 0.1 mmol/g.
- NAG0052 For the NAG0052 that has been connected to the resin, use the resin as a starting point, and connect the nucleoside monomers one by one from the 3'-5' direction according to the sequence of nucleotide arrangement. Each connection of a nucleoside monomer includes four steps of deprotection, coupling, capping, oxidation or sulfurization. The operation is conventional in the art.
- NAG0052 is connected to the sequence through solid-phase synthesis, and after aminolysis, the structure of NAG0052 loses some functional groups to become NAG0052'.
- the prepared dsRNA had the sense and antisense strands shown in Table 8 and Table 9.
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Abstract
The present invention relates to a dsRNA, and a preparation method therefor and the use thereof, and also relates to a pharmaceutical composition comprising the dsRNA, or a cell or a kit. The dsRNA can interfere with the expression of the HSD17B13 gene, and prevent and/or treat related diseases.
Description
本公开要求申请日为2021年12月16日的中国专利申请202111542323.X的优先权,本公开引用上述中国专利申请的全文。This disclosure claims the priority of Chinese patent application 202111542323.X with an application date of December 16, 2021, and this disclosure cites the full text of the above-mentioned Chinese patent application.
本公开涉及一种dsRNA、该dsRNA可以被靶向递送到细胞内,发挥RNA干扰的作用。本公开还涉及dsRNA的制备方法及应用。The present disclosure relates to a dsRNA that can be targeted and delivered into cells to play the role of RNA interference. The present disclosure also relates to preparation methods and applications of dsRNA.
RNA干扰(RNAi)是一种有效的沉默基因表达的方式。据统计,在人体内的疾病相关蛋白中,大约超过80%的蛋白质不能被目前常规的小分子药物以及生物大分子制剂所靶向,属于不可成药蛋白。利用RNA干扰技术,可以根据编码这些蛋白的mRNA,设计合适的siRNA,特异性靶向目标mRNA并降解目标mRNA,从而达到抑制相关的蛋白生成。因此siRNA具有非常重要的药物开发前景。然而要实现体内的治疗目的RNA干扰效应,需要向体内特定的细胞递送siRNA分子。RNA interference (RNAi) is an effective way to silence gene expression. According to statistics, more than 80% of the disease-related proteins in the human body cannot be targeted by current conventional small molecule drugs and biological macromolecular preparations, and are non-druggable proteins. Using RNA interference technology, we can design appropriate siRNA based on the mRNA encoding these proteins, specifically target the target mRNA and degrade the target mRNA, so as to inhibit the production of related proteins. Therefore, siRNA has a very important prospect of drug development. However, in order to achieve the RNA interference effect for therapeutic purposes in vivo, it is necessary to deliver siRNA molecules to specific cells in vivo.
采用靶向配体缀合siRNA,利用靶向配体与细胞膜表面的受体分子结构,从而内吞进入到细胞内,是一种有效的药物递送方式。例如,去唾液酸糖蛋白受体(ASGPR)是肝细胞特异性表达的受体,在肝细胞表面具有高丰度,胞内外转换快速的特点。半乳糖、半乳糖胺、N-乙酰半乳糖胺等单糖和多糖分子对ASGPR有高亲和性。文献报道(10.16476/j.pibb.2015.0028)使用氨基半乳糖分子簇(GalNAc)可以有效递送RNA到肝细胞,GalNAc分子被设计成三价或四价的分子簇可以显著提高单价或二价的GalNAc分子靶向肝细胞的能力。Conjugating siRNA with a targeting ligand, using the targeting ligand and the receptor molecular structure on the surface of the cell membrane, and endocytosis into the cell is an effective drug delivery method. For example, asialoglycoprotein receptor (ASGPR) is a receptor specifically expressed in hepatocytes, which has high abundance on the surface of hepatocytes and is characterized by rapid intracellular and extracellular transitions. Monosaccharide and polysaccharide molecules such as galactose, galactosamine, and N-acetylgalactosamine have high affinity for ASGPR. It was reported in the literature (10.16476/j.pibb.2015.0028) that the use of galactosamine molecular clusters (GalNAc) can effectively deliver RNA to hepatocytes, and GalNAc molecules designed as trivalent or tetravalent molecular clusters can significantly increase the concentration of monovalent or divalent GalNAc. Ability of the molecule to target hepatocytes.
不同分子簇结构,和与RNA之间不同的连接方式会明显的影响siRNA在体内的活性,更高的活性意味着更好的治疗效果,或更低的给药剂量,在同等药效下,更低的给药剂量也意味着更低的毒性反应。因此合理设计靶向配体和siRNA的共价连接方式具有重要意义。Different molecular cluster structures and different connection methods with RNA will obviously affect the activity of siRNA in vivo. Higher activity means better therapeutic effect, or lower dosage. Under the same drug effect, Lower dosage also means lower toxicity. Therefore, it is of great significance to rationally design the covalent linking method of targeting ligand and siRNA.
发明内容Contents of the invention
第一方面,本公开提供了一种双链核糖核酸(dsRNA),其包含siRNA和一个或多个与其缀合的配体,所述siRNA包含有义链和反义链,所述反义链在其5’端的第2位至第8位中的至少一个核苷酸位置处包含式(I)所示的化学修饰、其互变异构体或其药学上可接受的盐:In a first aspect, the present disclosure provides a double-stranded ribonucleic acid (dsRNA) comprising siRNA and one or more ligands conjugated thereto, the siRNA comprising a sense strand and an antisense strand, the antisense strand At least one nucleotide position from the 2nd to the 8th position of the 5' end contains a chemical modification represented by formula (I), a tautomer or a pharmaceutically acceptable salt thereof:
其中:Y选自O、NH和S;Wherein: Y is selected from O, NH and S;
每个X独立地选自CR
4(R
4’)、S、NR
5和NH-CO,其中R
4、R
4’、R
5分别独立地为H或C
1-C
6烷基;
Each X is independently selected from CR 4 (R 4 '), S, NR 5 and NH-CO, wherein R 4 , R 4 ', R 5 are independently H or C 1 -C 6 alkyl;
J
2为H或C
1-C
6烷基;
J 2 is H or C 1 -C 6 alkyl;
n=0、1或2;m=0、1或2;s=0或1;n=0, 1 or 2; m=0, 1 or 2; s=0 or 1;
R
3选自H、OH、卤素、NH
2、C
1-C
6烷基、C
1-C
6烷氧基、C
2-C
6烯基、C
2-C
6炔基、S-CH
3、NCH
3(CH
3)、OCH
2CH
2OCH
3、-O-烷基氨基和(CH
2)
pR
6;其中R
6选自OH、卤素、甲氧基、乙氧基、N
3、C
2-C
6烯基和C
2-C
6炔基,p=1、2或3;
R 3 is selected from H, OH, halogen, NH 2 , C 1 -C 6 alkyl, C 1 -C 6 alkoxy, C 2 -C 6 alkenyl, C 2 -C 6 alkynyl, S-CH 3 , NCH 3 (CH 3 ), OCH 2 CH 2 OCH 3 , -O-alkylamino and (CH 2 ) p R 6 ; wherein R 6 is selected from OH, halogen, methoxy, ethoxy, N 3 , C 2 -C 6 alkenyl and C 2 -C 6 alkynyl, p=1, 2 or 3;
其中:in:
R
1选自H、C
1-C
6烷基、C
1-C
6烷氧基、C
2-C
6烯基、C
2-C
6炔基和(CH
2)
qR
7;其中R
7选自OH、卤素、甲氧基、乙氧基、N
3、C
2-C
6烯基和C
2-C
6炔基,q=1、2或3;
R 1 is selected from H, C 1 -C 6 alkyl, C 1 -C 6 alkoxy, C 2 -C 6 alkenyl, C 2 -C 6 alkynyl and (CH 2 ) q R 7 ; wherein R 7 selected from OH, halogen, methoxy, ethoxy, N 3 , C 2 -C 6 alkenyl and C 2 -C 6 alkynyl, q=1, 2 or 3;
J
1为H或C
1-C
6烷基;
J 1 is H or C 1 -C 6 alkyl;
R
2选自H、OH、卤素、NH
2、C
1-C
6烷基、C
1-C
6烷氧基、C
2-C
6烯基、C
2-C
6炔基、S-CH
3、NCH
3(CH
3)、OCH
2CH
2OCH
3、-O-烷基氨基和(CH
2)
rR
8;其中R
8选自OH、卤素、甲氧基、乙氧基、N
3、C
2-C
6烯基和C
2-C
6炔基,r=1、2或3;
R 2 is selected from H, OH, halogen, NH 2 , C 1 -C 6 alkyl, C 1 -C 6 alkoxy, C 2 -C 6 alkenyl, C 2 -C 6 alkynyl, S-CH 3 , NCH 3 (CH 3 ), OCH 2 CH 2 OCH 3 , -O-alkylamino and (CH 2 ) r R 8 ; wherein R 8 is selected from OH, halogen, methoxy, ethoxy, N 3 , C 2 -C 6 alkenyl and C 2 -C 6 alkynyl, r=1, 2 or 3;
任选地,R
1和R
2直接相连成环;
Optionally, R 1 and R 2 are directly connected to form a ring;
B是碱基;B is a base;
所述式(I)所示的化学修饰、其互变异构体或其药学上可接受的盐修饰不是
The chemical modification represented by the formula (I), its tautomer or its pharmaceutically acceptable salt modification is not
所述配体为如式(II)所示化合物或其药学上可接受的盐,The ligand is a compound represented by formula (II) or a pharmaceutically acceptable salt thereof,
其中,L
1为C
1-C
30烷基链、或包含被一个或多个氧、硫、氮原子或C=O间断的C
1-C
30烷基链;
Wherein, L is a C 1 -C 30 alkyl chain, or contains a C 1 -C 30 alkyl chain interrupted by one or more oxygen, sulfur, nitrogen atoms or C=O;
R
11和R
12独立地为化学键、NR
16、C=O或-OC(=O)-;
R 11 and R 12 are independently a chemical bond, NR 16 , C=O or -OC(=O)-;
为单键或双键,且当
为单键时,R
13独立地为CR
17R
18、NR
16、O或S,当
为双键时,R
13独立地为CR
19或N;
is a single or double bond, and when When it is a single bond, R 13 is independently CR 17 R 18 , NR 16 , O or S, when When it is a double bond, R 13 is independently CR 19 or N;
R
14独立地为CR
19或N;
R 14 is independently CR 19 or N;
环A为存在或不存在的环烷基、杂环烷基、芳基或杂芳基,且当环A存在时,R
15独立地为CR
19或N,当环A不存在时,R
15独立地为CR
17R
18、NR
16或O;
Ring A is cycloalkyl, heterocycloalkyl, aryl or heteroaryl, present or absent, and when ring A exists, R 15 is independently CR 19 or N, and when ring A does not exist, R 15 independently CR 17 R 18 , NR 16 or O;
R
16和R
19独立地为氢、氘、烷基、烷氧基、环烷基、杂环烷基、芳基、杂芳基、SR'、S(=O)R'、S(=O)
2R'、S(=O)
2NR'(R”)、NR'(R”)、C(=O)R'、C(=O)OR'或C(=O)NR'(R”),所述烷基、烷氧基、环烷基、杂环烷基、芳基或杂芳基任选被一个或多个选自卤素、羟基、氧代、硝基、氰基、C
1-6烷基、C
1-6烷氧基、C
3-7环烷基、3-12元杂环烷基、6-12元芳基、5-12元杂芳基、SR'、S(=O)R'、S(=O)
2R'、S(=O)
2NR'(R”)、NR'(R”)、C(=O)R'、C(=O)OR'和C(=O)NR'(R”)中的基团所取代;
R 16 and R 19 are independently hydrogen, deuterium, alkyl, alkoxy, cycloalkyl, heterocycloalkyl, aryl, heteroaryl, SR', S(=O)R', S(=O ) 2 R', S(=O) 2 NR'(R"), NR'(R"), C(=O)R', C(=O)OR' or C(=O)NR'(R ”), the alkyl, alkoxy, cycloalkyl, heterocycloalkyl, aryl or heteroaryl are optionally replaced by one or more selected from halogen, hydroxyl, oxo, nitro, cyano, C 1-6 alkyl, C 1-6 alkoxy, C 3-7 cycloalkyl, 3-12 membered heterocycloalkyl, 6-12 membered aryl, 5-12 membered heteroaryl, SR', S (=O)R', S(=O) 2 R', S(=O) 2 NR'(R"), NR'(R"), C(=O)R', C(=O)OR 'and C(=O)NR'(R") replaced by groups in;
R
17和R
18独立地为氢、氘、烷基、烷氧基、环烷基、杂环烷基、芳基、杂芳基、SR'、S(=O)R'、S(=O)
2R'、S(=O)
2NR'(R”)、NR'(R”)、C(=O)R'、C(=O)OR'或C(=O)NR'(R”),所述烷基、烷氧基、环烷基、杂环烷基、芳基或杂芳基任选被一个或多个选自卤素、羟基、氧代、硝基、氰基、C
1-6烷基、C
1-6烷氧基、C
3-7环烷基、3-12元杂环烷基、6-12元芳基、5-12元杂芳基、SR'、S(=O)R'、S(=O)
2R'、S(=O)
2NR'(R”)、NR'(R”)、C(=O)R'、C(=O)OR'和C(=O)NR'(R”)中的基团所取代;
R 17 and R 18 are independently hydrogen, deuterium, alkyl, alkoxy, cycloalkyl, heterocycloalkyl, aryl, heteroaryl, SR', S(=O)R', S(=O ) 2 R', S(=O) 2 NR'(R"), NR'(R"), C(=O)R', C(=O)OR' or C(=O)NR'(R ”), the alkyl, alkoxy, cycloalkyl, heterocycloalkyl, aryl or heteroaryl are optionally replaced by one or more selected from halogen, hydroxyl, oxo, nitro, cyano, C 1-6 alkyl, C 1-6 alkoxy, C 3-7 cycloalkyl, 3-12 membered heterocycloalkyl, 6-12 membered aryl, 5-12 membered heteroaryl, SR', S (=O)R', S(=O) 2 R', S(=O) 2 NR'(R"), NR'(R"), C(=O)R', C(=O)OR 'and C(=O)NR'(R") replaced by groups in;
R'和R”独立地为氢、氘、羟基、烷基、烷氧基、环烷基、杂环烷基、芳基或杂芳基,所述烷基、烷氧基、环烷基、杂环烷基、芳基或杂芳基任选被一个或多个选自卤素、羟基、氧代、硝基和氰基中的取代基所取代;R' and R" are independently hydrogen, deuterium, hydroxyl, alkyl, alkoxy, cycloalkyl, heterocycloalkyl, aryl or heteroaryl, the alkyl, alkoxy, cycloalkyl, Heterocycloalkyl, aryl or heteroaryl is optionally substituted by one or more substituents selected from halogen, hydroxy, oxo, nitro and cyano;
m1、n1、p1和q1独立地为0、1、2、3或4;m1, n1, p1 and q1 are independently 0, 1, 2, 3 or 4;
R
b1、R
b2、R
b3、R
b4、R
b5、R
b6和R
b7独立地为-C(=O)-、-NHC(=O)-、-C(=O)O-、-C(=O)-(CH
2)
z8-O-或-NHC(=O)-(CH
2)
z9-O-;
R b1 , R b2 , R b3 , R b4 , R b5 , R b6 and R b7 are independently -C(=O)-, -NHC(=O)-, -C(=O)O-, -C (=O)-(CH 2 ) z8 -O- or -NHC(=O)-(CH 2 ) z9 -O-;
z1、z2、z3、z4、z5、z6、z7、z8和z9独立地为0-10的整数;z1, z2, z3, z4, z5, z6, z7, z8 and z9 are independently an integer of 0-10;
L
2为C
1-C
30烷基链、或包含被一个或多个氧、硫、氮原子或C=O间断的C
1-C
30烷基链;
L 2 is a C 1 -C 30 alkyl chain, or contains a C 1 -C 30 alkyl chain interrupted by one or more oxygen, sulfur, nitrogen atoms or C=O;
r1为1-10的整数。r1 is an integer of 1-10.
在一些实施方案中(某些基团或特征的定义如下,未定义的基团或特征同其他任一方案所述,以下简称“在一些实施方案中”),当X为NH-CO时,R
1不是H。
In some embodiments (some groups or features are defined as follows, undefined groups or features are as described in any other scheme, hereinafter referred to as "in some embodiments"), when X is NH-CO, R1 is not H.
在一些实施方案中,以2’-甲氧基修饰替换式(I)所示的化学修饰、其互变异构体或其药学上可接受的盐。In some embodiments, the chemical modification represented by formula (I), its tautomer, or a pharmaceutically acceptable salt thereof is replaced with a 2'-methoxy modification.
在一些实施方案中,式(I)所示的化学修饰选自式(I-1)所示的化学修饰:In some embodiments, the chemical modification shown in formula (I) is selected from the chemical modification shown in formula (I-1):
其中:Y选自O、NH和S;Wherein: Y is selected from O, NH and S;
每个X独立地选自CR
4(R
4’)、S、NR
5和NH-CO,其中R
4、R
4’、R
5分别独立地为H或C
1-C
6烷基;
Each X is independently selected from CR 4 (R 4 '), S, NR 5 and NH-CO, wherein R 4 , R 4 ', R 5 are independently H or C 1 -C 6 alkyl;
每个J
1、J
2分别独立地为H或C
1-C
6烷基;
Each J 1 and J 2 are independently H or C 1 -C 6 alkyl;
n=0、1或2;m=0、1或2;s=0或1;n=0, 1 or 2; m=0, 1 or 2; s=0 or 1;
R
3选自H、OH、卤素、NH
2、C
1-C
6烷基、C
1-C
6烷氧基、C
2-C
6烯基、C
2-C
6炔基、S-CH
3、NCH
3(CH
3)、OCH
2CH
2OCH
3、-O-烷基氨基和(CH
2)
pR
6;其中R
6选自OH、卤素、甲氧基、乙氧基、N
3、C
2-C
6烯基和C
2-C
6炔基,p=1、2或3;
R 3 is selected from H, OH, halogen, NH 2 , C 1 -C 6 alkyl, C 1 -C 6 alkoxy, C 2 -C 6 alkenyl, C 2 -C 6 alkynyl, S-CH 3 , NCH 3 (CH 3 ), OCH 2 CH 2 OCH 3 , -O-alkylamino and (CH 2 ) p R 6 ; wherein R 6 is selected from OH, halogen, methoxy, ethoxy, N 3 , C 2 -C 6 alkenyl and C 2 -C 6 alkynyl, p=1, 2 or 3;
R
1选自H、C
1-C
6烷基、C
1-C
6烷氧基、C
2-C
6烯基、C
2-C
6炔基和(CH
2)
qR
7;其中R
7选自OH、卤素、甲氧基、乙氧基、N
3、C
2-C
6烯基和C
2-C
6炔基,q=1、2或3;
R 1 is selected from H, C 1 -C 6 alkyl, C 1 -C 6 alkoxy, C 2 -C 6 alkenyl, C 2 -C 6 alkynyl and (CH 2 ) q R 7 ; wherein R 7 selected from OH, halogen, methoxy, ethoxy, N 3 , C 2 -C 6 alkenyl and C 2 -C 6 alkynyl, q=1, 2 or 3;
R
2选自H、OH、卤素、NH
2、C
1-C
6烷基、C
1-C
6烷氧基、C
2-C
6烯基、C
2-C
6炔基、S-CH
3、NCH
3(CH
3)、OCH
2CH
2OCH
3、-O-烷基氨基和(CH
2)
rR
8;其中R
8选 自OH、卤素、甲氧基、乙氧基、N
3、C
2-C
6烯基和C
2-C
6炔基,r=1、2或3;
R 2 is selected from H, OH, halogen, NH 2 , C 1 -C 6 alkyl, C 1 -C 6 alkoxy, C 2 -C 6 alkenyl, C 2 -C 6 alkynyl, S-CH 3 , NCH 3 (CH 3 ), OCH 2 CH 2 OCH 3 , -O-alkylamino and (CH 2 ) r R 8 ; wherein R 8 is selected from OH, halogen, methoxy, ethoxy, N 3 , C 2 -C 6 alkenyl and C 2 -C 6 alkynyl, r=1, 2 or 3;
任选地,R
1和R
2直接相连成环;
Optionally, R 1 and R 2 are directly connected to form a ring;
B如式(I)中所定义。B is as defined in formula (I).
在一些实施方案中,B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,式(I)所示的化学修饰选自式(I-2)所示的化学修饰:In some embodiments, the chemical modification shown in formula (I) is selected from the chemical modification shown in formula (I-2):
其中Y选自O、NH和S;Wherein Y is selected from O, NH and S;
每个X独立地选自CR
4(R
4’)、S、NR
5和NH-CO,其中R
4、R
4’、R
5分别独立地为H或C
1-C
6烷基;
Each X is independently selected from CR 4 (R 4 '), S, NR 5 and NH-CO, wherein R 4 , R 4 ', R 5 are independently H or C 1 -C 6 alkyl;
n=0、1或2;m=0、1或2;s=0或1;n=0, 1 or 2; m=0, 1 or 2; s=0 or 1;
每个J
1、J
2分别独立地为H或C
1-C
6烷基;
Each J 1 and J 2 are independently H or C 1 -C 6 alkyl;
R
3选自H、OH、卤素、NH
2、C
1-C
6烷基、C
1-C
6烷氧基、C
2-C
6烯基、C
2-C
6炔基、S-CH
3、NCH
3(CH
3)、OCH
2CH
2OCH
3、-O-烷基氨基和(CH
2)
pR
6;其中R
6选自OH、卤素、甲氧基、乙氧基、N
3、C
2-C
6烯基和C
2-C
6炔基,p=1、2或3;
R 3 is selected from H, OH, halogen, NH 2 , C 1 -C 6 alkyl, C 1 -C 6 alkoxy, C 2 -C 6 alkenyl, C 2 -C 6 alkynyl, S-CH 3 , NCH 3 (CH 3 ), OCH 2 CH 2 OCH 3 , -O-alkylamino and (CH 2 ) p R 6 ; wherein R 6 is selected from OH, halogen, methoxy, ethoxy, N 3 , C 2 -C 6 alkenyl and C 2 -C 6 alkynyl, p=1, 2 or 3;
R
1选自H、C
1-C
6烷基、C
1-C
6烷氧基、C
2-C
6烯基、C
2-C
6炔基和(CH
2)
qR
7;其中R
7选自OH、卤素、甲氧基、乙氧基、N
3、C
2-C
6烯基和C
2-C
6炔基,q=1、2或3;
R 1 is selected from H, C 1 -C 6 alkyl, C 1 -C 6 alkoxy, C 2 -C 6 alkenyl, C 2 -C 6 alkynyl and (CH 2 ) q R 7 ; wherein R 7 selected from OH, halogen, methoxy, ethoxy, N 3 , C 2 -C 6 alkenyl and C 2 -C 6 alkynyl, q=1, 2 or 3;
R
2选自H、C
1-C
6烷基、C
1-C
6烷氧基、S-CH
3、NCH
3(CH
3)、OCH
2CH
2OCH
3、-O-烷基氨基和(CH
2)
rR
8;其中R
8选自OH、卤素、甲氧基、乙氧基、N
3、C
2-C
6烯基和C
2-C
6炔基;r=1、2或3;
R 2 is selected from H, C 1 -C 6 alkyl, C 1 -C 6 alkoxy, S-CH 3 , NCH 3 (CH 3 ), OCH 2 CH 2 OCH 3 , -O-alkylamino and ( CH 2 ) r R 8 ; wherein R 8 is selected from OH, halogen, methoxy, ethoxy, N 3 , C 2 -C 6 alkenyl and C 2 -C 6 alkynyl; r=1, 2 or 3 ;
任选地,R
1和R
2直接相连成环;
Optionally, R 1 and R 2 are directly connected to form a ring;
B如式(I)中所定义。B is as defined in formula (I).
在一些实施方案中,B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,每个X独立地选自CR
4(R
4’)、S、NR
5和NH-CO,其中R
4、R
4’、R
5分别独立地为H或C
1-C
3烷基;
In some embodiments, each X is independently selected from CR 4 (R 4 '), S, NR 5 and NH-CO, wherein R 4 , R 4 ', R 5 are each independently H or C 1 -C 3 alkyl groups;
n=0、1或2;m=0、1或2;s=0或1;n=0, 1 or 2; m=0, 1 or 2; s=0 or 1;
每个J
1、J
2分别独立地为H或C
1-C
3烷基;
Each J 1 and J 2 are independently H or C 1 -C 3 alkyl;
R
3选自H、OH、卤素、NH
2、C
1-C
3烷基、C
1-C
3烷氧基、C
2-C
4烯基、C
2-C
4炔基、S-CH
3、NCH
3(CH
3)、OCH
2CH
2OCH
3、-O-烷基氨基和(CH
2)
pR
6;其中R
6选自OH、卤素、甲氧基、乙氧基、N
3、C
2-C
6烯基和C
2-C
6炔基,p=1、2或3;
R 3 is selected from H, OH, halogen, NH 2 , C 1 -C 3 alkyl, C 1 -C 3 alkoxy, C 2 -C 4 alkenyl, C 2 -C 4 alkynyl, S-CH 3 , NCH 3 (CH 3 ), OCH 2 CH 2 OCH 3 , -O-alkylamino and (CH 2 ) p R 6 ; wherein R 6 is selected from OH, halogen, methoxy, ethoxy, N 3 , C 2 -C 6 alkenyl and C 2 -C 6 alkynyl, p=1, 2 or 3;
R
1选自H、C
1-C
3烷基、C
1-C
3烷氧基、C
2-C
4烯基、C
2-C
4炔基和(CH
2)
qR
7;其中R
7选自OH、卤素、甲氧基、乙氧基、N
3、C
2-C
4烯基和C
2-C
4炔基,q=1、2或3;
R 1 is selected from H, C 1 -C 3 alkyl, C 1 -C 3 alkoxy, C 2 -C 4 alkenyl, C 2 -C 4 alkynyl and (CH 2 ) q R 7 ; wherein R 7 selected from OH, halogen, methoxy, ethoxy, N 3 , C 2 -C 4 alkenyl and C 2 -C 4 alkynyl, q=1, 2 or 3;
R
2选自H、OH、卤素、NH
2、C
1-C
3烷基、C
1-C
3烷氧基、C
2-C
4烯基、C
2-C
4炔基、S-CH
3、NCH
3(CH
3)、OCH
2CH
2OCH
3、-O-烷基氨基和(CH
2)
rR
8;其中R
8选自OH、卤素、甲氧基、乙氧基、N
3、C
2-C
4烯基和C
2-C
4炔基,r=1、2或3;
R 2 is selected from H, OH, halogen, NH 2 , C 1 -C 3 alkyl, C 1 -C 3 alkoxy, C 2 -C 4 alkenyl, C 2 -C 4 alkynyl, S-CH 3 , NCH 3 (CH 3 ), OCH 2 CH 2 OCH 3 , -O-alkylamino and (CH 2 ) r R 8 ; wherein R 8 is selected from OH, halogen, methoxy, ethoxy, N 3 , C 2 -C 4 alkenyl and C 2 -C 4 alkynyl, r=1, 2 or 3;
任选地,R
1和R
2直接相连成环;
Optionally, R 1 and R 2 are directly connected to form a ring;
B如式(I)中所定义。B is as defined in formula (I).
在一些实施方案中,B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,每个X独立地选自CR
4(R
4’)、S、NR
5和NH-CO,其中R
4、R
4’、R
5分别独立地为H、甲基、乙基、正丙基或异丙基;
In some embodiments, each X is independently selected from CR 4 (R 4 '), S, NR 5 , and NH-CO, wherein R 4 , R 4 ', and R 5 are each independently H, methyl, ethyl radical, n-propyl or isopropyl;
n=0、1或2;m=0、1或2;s=0或1;n=0, 1 or 2; m=0, 1 or 2; s=0 or 1;
每个J
1、J
2分别独立地为H或甲基;
Each J 1 and J 2 are independently H or methyl;
R
3选自H、OH、F、Cl、NH
2、甲基、乙基、正丙基、异丙基、甲氧基、乙氧基、正丙氧基、异丙氧基、乙烯基、烯丙基、乙炔基、炔丙基、S-CH
3、NCH
3(CH
3)、OCH
2CH
2OCH
3、-O-甲基氨基、-O-乙基氨基和(CH
2)
pR
6;其中R
6选自OH、F、Cl、甲氧基、乙氧基、N
3、乙烯基、烯丙基、乙炔基和炔丙基,p=1或2;
R 3 is selected from H, OH, F, Cl, NH 2 , methyl, ethyl, n-propyl, isopropyl, methoxy, ethoxy, n-propoxy, isopropoxy, vinyl, Allyl, ethynyl, propargyl, S-CH 3 , NCH 3 (CH 3 ), OCH 2 CH 2 OCH 3 , -O-methylamino, -O-ethylamino, and (CH 2 ) p R 6 ; wherein R 6 is selected from OH, F, Cl, methoxy, ethoxy, N 3 , vinyl, allyl, ethynyl and propargyl, p=1 or 2;
R
1选自H、甲基、乙基、正丙基、异丙基、甲氧基、乙氧基、正丙氧基、异丙氧基、乙烯基、烯丙基、乙炔基、炔丙基和(CH
2)
qR
7;其中R
7选自OH、F、Cl、甲氧基、乙氧基、N
3、乙烯基、烯丙基、乙炔基和炔丙基,q=1或2;
R is selected from H, methyl, ethyl, n-propyl, isopropyl, methoxy, ethoxy, n-propoxy, isopropoxy, vinyl, allyl, ethynyl, propargyl and (CH 2 ) q R 7 ; wherein R 7 is selected from OH, F, Cl, methoxy, ethoxy, N 3 , vinyl, allyl, ethynyl and propargyl, q=1 or 2;
R
2选自H、OH、F、Cl、NH
2、甲基、乙基、正丙基、异丙基、甲氧基、乙氧基、正丙氧基、异丙氧基、乙烯基、烯丙基、乙炔基、炔丙基、S-CH
3、NCH
3(CH
3)、OCH
2CH
2OCH
3、-O-甲基氨基、-O-乙基氨基和(CH
2)
rR
8;其中R
8选自OH、F、Cl、甲氧基、乙氧基、N
3、乙烯基、烯丙基、乙炔基和炔丙基,r=1或2;
R 2 is selected from H, OH, F, Cl, NH 2 , methyl, ethyl, n-propyl, isopropyl, methoxy, ethoxy, n-propoxy, isopropoxy, vinyl, Allyl, ethynyl, propargyl, S-CH 3 , NCH 3 (CH 3 ), OCH 2 CH 2 OCH 3 , -O-methylamino, -O-ethylamino, and (CH 2 ) r R 8 ; wherein R 8 is selected from OH, F, Cl, methoxy, ethoxy, N 3 , vinyl, allyl, ethynyl and propargyl, r=1 or 2;
任选地,R
1和R
2直接相连成环;
Optionally, R 1 and R 2 are directly connected to form a ring;
B如式(I)中所定义。B is as defined in formula (I).
在一些实施方案中,B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,每个X独立地选自CR
4(R
4’)、S、NR
5和NH-CO,其中R
4、R
4’、R
5分别独立地为H、甲基、乙基、正丙基或异丙基;
In some embodiments, each X is independently selected from CR 4 (R 4 '), S, NR 5 , and NH-CO, wherein R 4 , R 4 ', and R 5 are each independently H, methyl, ethyl radical, n-propyl or isopropyl;
n=0、1或2;m=0、1或2;s=0或1;n=0, 1 or 2; m=0, 1 or 2; s=0 or 1;
每个J
1、J
2分别独立地为H或甲基;
Each J 1 and J 2 are independently H or methyl;
R
3选自H、OH、F、Cl、NH
2、甲基、乙基、正丙基、异丙基、甲氧基、乙氧基、正丙氧基、异丙氧基、乙烯基、烯丙基、乙炔基、炔丙基、S-CH
3、NCH
3(CH
3)、OCH
2CH
2OCH
3、-O-甲基氨基、-O-乙基氨基和(CH
2)
pR
6;其中R
6选自OH、F、Cl、甲氧基、乙氧基、N
3、乙烯基、烯丙基、乙炔基和炔丙基,p=1或2;
R 3 is selected from H, OH, F, Cl, NH 2 , methyl, ethyl, n-propyl, isopropyl, methoxy, ethoxy, n-propoxy, isopropoxy, vinyl, Allyl, ethynyl, propargyl, S-CH 3 , NCH 3 (CH 3 ), OCH 2 CH 2 OCH 3 , -O-methylamino, -O-ethylamino, and (CH 2 ) p R 6 ; wherein R 6 is selected from OH, F, Cl, methoxy, ethoxy, N 3 , vinyl, allyl, ethynyl and propargyl, p=1 or 2;
R
1选自H、甲基、乙基、正丙基、异丙基、甲氧基、乙氧基、正丙氧基、异丙氧基、乙烯基、烯丙基、乙炔基、炔丙基和(CH
2)
qR
7;其中R
7选自OH、F、Cl、甲氧基、乙氧基、N
3、乙烯基、烯丙基、乙炔基和炔丙基,q=1或2;
R is selected from H, methyl, ethyl, n-propyl, isopropyl, methoxy, ethoxy, n-propoxy, isopropoxy, vinyl, allyl, ethynyl, propargyl and (CH 2 ) q R 7 ; wherein R 7 is selected from OH, F, Cl, methoxy, ethoxy, N 3 , vinyl, allyl, ethynyl and propargyl, q=1 or 2;
R
2选自H、OH、F、Cl、NH
2、甲基、乙基、正丙基、异丙基、甲氧基、乙氧基、正丙氧基、异丙氧基、乙烯基、烯丙基、乙炔基、炔丙基、S-CH
3、NCH
3(CH
3)、OCH
2CH
2OCH
3、-O-甲基氨基、-O-乙基氨基和(CH
2)
rR
8;其中R
8选自OH、F、Cl、甲氧基、乙氧基、N
3、乙烯基、烯丙基、乙炔基和炔丙基,r=1或2;
R 2 is selected from H, OH, F, Cl, NH 2 , methyl, ethyl, n-propyl, isopropyl, methoxy, ethoxy, n-propoxy, isopropoxy, vinyl, Allyl, ethynyl, propargyl, S-CH 3 , NCH 3 (CH 3 ), OCH 2 CH 2 OCH 3 , -O-methylamino, -O-ethylamino, and (CH 2 ) r R 8 ; wherein R 8 is selected from OH, F, Cl, methoxy, ethoxy, N 3 , vinyl, allyl, ethynyl and propargyl, r=1 or 2;
任选地,R
1和R
2直接相连成环;
Optionally, R 1 and R 2 are directly connected to form a ring;
B如式(I)中所定义。B is as defined in formula (I).
在一些实施方案中,B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,Y为O或NH;每个X独立地选自NH-CO、CH
2和NH;
In some embodiments, Y is O or NH; each X is independently selected from NH-CO, CH and NH;
n=0或1;m=0或1;s=0或1;n=0 or 1; m=0 or 1; s=0 or 1;
每个J
1、J
2分别独立地为H;
Each of J 1 and J 2 is independently H;
R
1选自H、甲基和CH
2OH;
R 1 is selected from H, methyl and CH 2 OH;
R
2选自H、OH、NH
2、甲基和CH
2OH;
R 2 is selected from H, OH, NH 2 , methyl and CH 2 OH;
R
3选自H、OH、NH
2、甲基和CH
2OH;
R 3 is selected from H, OH, NH 2 , methyl and CH 2 OH;
任选地,R
1和R
2直接相连成环;
Optionally, R 1 and R 2 are directly connected to form a ring;
B如式(I)中所定义。B is as defined in formula (I).
在一些实施方案中,B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,Y为O或NH;每个X独立地选自NH-CO、CH
2和NH;
In some embodiments, Y is O or NH; each X is independently selected from NH-CO, CH and NH;
n=0或1;m=0或1;s=0或1;n=0 or 1; m=0 or 1; s=0 or 1;
每个J
1、J
2分别独立地为H;
Each of J 1 and J 2 is independently H;
R
1选自H、甲基和CH
2OH;
R 1 is selected from H, methyl and CH 2 OH;
R
2选自H、甲基和CH
2OH;
R 2 is selected from H, methyl and CH 2 OH;
R
3选自H、OH、NH
2、甲基和CH
2OH;
R 3 is selected from H, OH, NH 2 , methyl and CH 2 OH;
任选地,R
1和R
2直接相连成环;
Optionally, R 1 and R 2 are directly connected to form a ring;
B如式(I)中所定义。B is as defined in formula (I).
在一些实施方案中,B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,Y为O或NH;In some embodiments, Y is O or NH;
每个X独立地选自CR
4(R
4’)、NR
5和NH-CO,R
4、R
4’、R
5分别独立地为H或C
1-C
6烷基;
Each X is independently selected from CR 4 (R 4 '), NR 5 and NH-CO, R 4 , R 4 ', R 5 are independently H or C 1 -C 6 alkyl;
J
2为H或C
1-C
6烷基;
J 2 is H or C 1 -C 6 alkyl;
n=0或1;m=0或1;s=0或1;n=0 or 1; m=0 or 1; s=0 or 1;
R
3选自H、OH、NH
2、C
1-C
6烷基、C
1-C
6烷氧基和(CH
2)
pR
6;R
6选自OH、甲氧基和乙氧基,p=1、2或3;
R 3 is selected from H, OH, NH 2 , C 1 -C 6 alkyl, C 1 -C 6 alkoxy and (CH 2 ) p R 6 ; R 6 is selected from OH, methoxy and ethoxy, p = 1, 2 or 3;
R
1选自H、OH、C
1-C
6烷基、C
1-C
6烷氧基和(CH
2)
qR
7;R
7选自OH、甲氧基和乙氧基,q=1、2或3;
R 1 is selected from H, OH, C 1 -C 6 alkyl, C 1 -C 6 alkoxy and (CH 2 ) q R 7 ; R 7 is selected from OH, methoxy and ethoxy, q=1 , 2 or 3;
J
1为H或C
1-C
6烷基;
J 1 is H or C 1 -C 6 alkyl;
R
2选自H、OH、C
1-C
6烷基、C
1-C
6烷氧基和(CH
2)
rR
8;R
8选自OH、甲氧基 和乙氧基,r=1、2或3;
R 2 is selected from H, OH, C 1 -C 6 alkyl, C 1 -C 6 alkoxy and (CH 2 ) r R 8 ; R 8 is selected from OH, methoxy and ethoxy, r=1 , 2 or 3;
任选地,R
1和R
2直接相连成3-6元环;
Optionally, R 1 and R 2 are directly connected to form a 3-6 membered ring;
B是碱基;B is a base;
所述式(I)所示的化学修饰、其互变异构体或其药学上可接受的盐修饰不是
The chemical modification represented by the formula (I), its tautomer or its pharmaceutically acceptable salt modification is not
在一些实施方案中,X独立地选自CR
4(R
4’)和NH-CO。
In some embodiments, X is independently selected from CR 4 (R 4 ′) and NH—CO.
在一些实施方案中,X独立地选自CR
4(R
4’)。
In some embodiments, X is independently selected from CR 4 (R 4 ′).
在一些实施方案中,R
3选自H、C
1-C
6烷基和(CH
2)
pR
6。
In some embodiments, R 3 is selected from H, C 1 -C 6 alkyl, and (CH 2 ) p R 6 .
在一些实施方案中,R
3选自H和C
1-C
6烷基。
In some embodiments, R 3 is selected from H and C 1 -C 6 alkyl.
在一些实施方案中,R
1选自H、C
1-C
6烷基和(CH
2)
qR
7。
In some embodiments, R 1 is selected from H, C 1 -C 6 alkyl, and (CH 2 ) q R 7 .
在一些实施方案中,R
1选自H和C
1-C
6烷基。
In some embodiments, R 1 is selected from H and C 1 -C 6 alkyl.
在一些实施方案中,R
2选自H、OH、C
1-C
6烷基和(CH
2)
rR
8。
In some embodiments, R 2 is selected from H, OH, C 1 -C 6 alkyl, and (CH 2 ) r R 8 .
在一些实施方案中,R
2选自H、C
1-C
6烷基和(CH
2)
rR
8。
In some embodiments, R 2 is selected from H, C 1 -C 6 alkyl, and (CH 2 ) r R 8 .
在一些实施方案中,Y为O;In some embodiments, Y is O;
每个X独立地选自CR
4(R
4’)和NH-CO,R
4和R
4’分别独立地为H或C
1-C
6烷基;
Each X is independently selected from CR 4 (R 4 ') and NH-CO, R 4 and R 4 ' are independently H or C 1 -C 6 alkyl;
J
2为H或C
1-C
6烷基;
J 2 is H or C 1 -C 6 alkyl;
R
3选自H、C
1-C
6烷基和(CH
2)
pR
6;R
6选自OH,p=1、2或3;
R 3 is selected from H, C 1 -C 6 alkyl and (CH 2 ) p R 6 ; R 6 is selected from OH, p=1, 2 or 3;
R
1选自H、C
1-C
6烷基和(CH
2)
qR
7;R
7选自OH,q=1、2或3;
R 1 is selected from H, C 1 -C 6 alkyl and (CH 2 ) q R 7 ; R 7 is selected from OH, q=1, 2 or 3;
J
1为H或C
1-C
6烷基;
J 1 is H or C 1 -C 6 alkyl;
R
2选自H、OH、C
1-C
6烷基和(CH
2)
rR
8;R
8选自OH,r=1、2或3;
R 2 is selected from H, OH, C 1 -C 6 alkyl and (CH 2 ) r R 8 ; R 8 is selected from OH, r=1, 2 or 3;
任选地,R
1和R
2直接相连成5-6元环;
Optionally, R 1 and R 2 are directly connected to form a 5-6 membered ring;
B是碱基。B is a base.
在一些实施方案中,B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌 呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,Y为O;In some embodiments, Y is O;
每个X独立地选自CR
4(R
4’),R
4和R
4’分别独立地为H或C
1-C
6烷基;
Each X is independently selected from CR 4 (R 4 '), R 4 and R 4 ' are independently H or C 1 -C 6 alkyl;
J
2为H;
J 2 is H;
R
3选自H和C
1-C
6烷基;
R 3 is selected from H and C 1 -C 6 alkyl;
R
1选自H和C
1-C
6烷基;
R 1 is selected from H and C 1 -C 6 alkyl;
J
1为H或C
1-C
6烷基;
J 1 is H or C 1 -C 6 alkyl;
R
2选自H、C
1-C
6烷基和(CH
2)
rR
8;R
8选自OH,r=1、2或3;
R 2 is selected from H, C 1 -C 6 alkyl and (CH 2 ) r R 8 ; R 8 is selected from OH, r=1, 2 or 3;
任选地,R
1和R
2直接相连成5-6元环;
Optionally, R 1 and R 2 are directly connected to form a 5-6 membered ring;
B是碱基。B is a base.
在一些实施方案中,B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,Y为O。In some embodiments, Y is O.
在一些实施方案中,X独立地选自CR
4(R
4’)、NR
5和NH-CO,R
4、R
4’、R
5分别独立地为H、甲基、乙基、正丙基或异丙基。在一些实施方案中,X独立地选自NH-CO、CH
2和NH。在一些实施方案中,X独立地选自NH-CO和CH
2。在一些实施方案中,X为CH
2。
In some embodiments, X is independently selected from CR 4 (R 4 '), NR 5 and NH-CO, R 4 , R 4 ', and R 5 are independently H, methyl, ethyl, n-propyl or isopropyl. In some embodiments, X is independently selected from NH—CO, CH 2 and NH. In some embodiments, X is independently selected from NH—CO and CH 2 . In some embodiments, X is CH2 .
在一些实施方案中,J
2为H或甲基。在一些实施方案中,J
2为H。
In some embodiments, J 2 is H or methyl. In some embodiments, J is H.
在一些实施方案中,R
3选自H、OH、NH
2、甲基、乙基、正丙基、异丙基、甲氧基、乙氧基、正丙氧基、异丙氧基和(CH
2)
pR
6,R
6选自OH、甲氧基和乙氧基,p=1或2。在一些实施方案中,R
3选自H、甲基、乙基、正丙基、异丙基和(CH
2)
pR
6,R
6选自OH,p=1或2。在一些实施方案中,R
3选自H和甲基。
In some embodiments, R 3 is selected from H, OH, NH 2 , methyl, ethyl, n-propyl, isopropyl, methoxy, ethoxy, n-propoxy, isopropoxy, and ( CH 2 ) p R 6 , R 6 is selected from OH, methoxy and ethoxy, p=1 or 2. In some embodiments, R 3 is selected from H, methyl, ethyl, n-propyl, isopropyl, and (CH 2 ) p R 6 , R 6 is selected from OH, and p=1 or 2. In some embodiments, R is selected from H and methyl.
在一些实施方案中,R
1选自H、OH、甲基、乙基、正丙基、异丙基、甲氧基、乙氧基、正丙氧基、异丙氧基和(CH
2)
qR
7,R
7选自OH,q=1或2。在一些实施方案中,R
1选自H、甲基、乙基、正丙基、异丙基和(CH
2)
qR
7,R
7选自OH,q=1或2。在一些实施方案中,R
1选自H和甲基。
In some embodiments, R 1 is selected from H, OH, methyl, ethyl, n-propyl, isopropyl, methoxy, ethoxy, n-propoxy, isopropoxy, and (CH 2 ) q R 7 , R 7 is selected from OH, q=1 or 2. In some embodiments, R 1 is selected from H, methyl, ethyl, n-propyl, isopropyl, and (CH 2 ) q R 7 , R 7 is selected from OH, and q=1 or 2. In some embodiments, R 1 is selected from H and methyl.
在一些实施方案中,R
2选自H、OH、甲基、乙基、正丙基、异丙基、甲氧基、乙氧基、正丙氧基、异丙氧基和(CH
2)
rR
8,R
8选自OH,r=1或2。在一些实施方案中,R
2选自H、OH、甲基、乙基、正丙基、异丙基和(CH
2)
rR
8,R
8选自OH,r=1或2。在一些实施方案中,R
2选自H、甲基和CH
2OH。
In some embodiments, R is selected from H, OH, methyl, ethyl, n-propyl, isopropyl, methoxy, ethoxy, n-propoxy, isopropoxy, and (CH 2 ) r R 8 , R 8 is selected from OH, r=1 or 2. In some embodiments, R 2 is selected from H, OH, methyl, ethyl, n-propyl, isopropyl, and (CH 2 ) r R 8 , R 8 is selected from OH, and r=1 or 2. In some embodiments, R2 is selected from H, methyl, and CH2OH .
在一些实施方案中,R
1和R
2直接相连成5-6元环。在一些实施方案中,R
1和R
2直接相连形成3-6元环烷基。在一些实施方案中,R
1和R
2直接相连形成环戊基或环己基。
In some embodiments, R1 and R2 are directly linked to form a 5-6 membered ring. In some embodiments, R and R are directly connected to form a 3-6 membered cycloalkyl. In some embodiments, R 1 and R 2 are directly connected to form cyclopentyl or cyclohexyl.
在一些实施方案中,所述式(I)所示的化学修饰选自以下任一结构:In some embodiments, the chemical modification represented by the formula (I) is selected from any of the following structures:
其中:B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯中。Wherein: B is selected from purine base, pyrimidine base, indole, 5-nitroindole and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,所述式(I)所示的化学修饰选自以下任一结构:In some embodiments, the chemical modification represented by the formula (I) is selected from any of the following structures:
其中:B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯中。Wherein: B is selected from purine base, pyrimidine base, indole, 5-nitroindole and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,所述式(I)所示的化学修饰选自以下任一结构:In some embodiments, the chemical modification represented by the formula (I) is selected from any of the following structures:
其中:B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯中。Wherein: B is selected from purine base, pyrimidine base, indole, 5-nitroindole and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞 嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,所述式(I)所示的化学修饰选自以下任一结构:In some embodiments, the chemical modification represented by the formula (I) is selected from any of the following structures:
其中:B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯中。Wherein: B is selected from purine base, pyrimidine base, indole, 5-nitroindole and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,包含式(I)所示的化学修饰、其互变异构体或其药学上可接受的盐的核苷酸选自包含式(I’)所示的化学修饰、其互变异构体或其药学上可接受的盐的核苷酸,In some embodiments, the nucleotide comprising the chemical modification represented by formula (I), its tautomer or a pharmaceutically acceptable salt thereof is selected from the group consisting of the chemical modification represented by formula (I'), its Nucleotides of tautomers or pharmaceutically acceptable salts thereof,
其中:Y选自O、NH和S;Wherein: Y is selected from O, NH and S;
每个X独立地选自CR
4(R
4’)、S、NR
5和NH-CO,其中R
4、R
4’、R
5分别独立地为H或C
1-C
6烷基;
Each X is independently selected from CR 4 (R 4 '), S, NR 5 and NH-CO, wherein R 4 , R 4 ', R 5 are independently H or C 1 -C 6 alkyl;
J
2为H或C
1-C
6烷基;
J 2 is H or C 1 -C 6 alkyl;
n=0、1或2;m=0、1或2;s=0或1;n=0, 1 or 2; m=0, 1 or 2; s=0 or 1;
R
3选自H、OH、卤素、NH
2、C
1-C
6烷基、C
1-C
6烷氧基、C
2-C
6烯基、C
2-C
6炔基、S-CH
3、NCH
3(CH
3)、OCH
2CH
2OCH
3、-O-烷基氨基和(CH
2)
pR
6;其中R
6选自OH、卤素、甲氧基、乙氧基、N
3、C
2-C
6烯基和C
2-C
6炔基,p=1、2或3;
R 3 is selected from H, OH, halogen, NH 2 , C 1 -C 6 alkyl, C 1 -C 6 alkoxy, C 2 -C 6 alkenyl, C 2 -C 6 alkynyl, S-CH 3 , NCH 3 (CH 3 ), OCH 2 CH 2 OCH 3 , -O-alkylamino and (CH 2 ) p R 6 ; wherein R 6 is selected from OH, halogen, methoxy, ethoxy, N 3 , C 2 -C 6 alkenyl and C 2 -C 6 alkynyl, p=1, 2 or 3;
其中:in:
R
1选自H、C
1-C
6烷基、C
1-C
6烷氧基、C
2-C
6烯基、C
2-C
6炔基和(CH
2)
qR
7;其中R
7选自OH、卤素、甲氧基、乙氧基、N
3、C
2-C
6烯基和C
2-C
6炔基,q=1、2或3;
R 1 is selected from H, C 1 -C 6 alkyl, C 1 -C 6 alkoxy, C 2 -C 6 alkenyl, C 2 -C 6 alkynyl and (CH 2 ) q R 7 ; wherein R 7 selected from OH, halogen, methoxy, ethoxy, N 3 , C 2 -C 6 alkenyl and C 2 -C 6 alkynyl, q=1, 2 or 3;
J
1为H或C
1-C
6烷基;
J 1 is H or C 1 -C 6 alkyl;
R
2选自H、OH、卤素、NH
2、C
1-C
6烷基、C
1-C
6烷氧基、C
2-C
6烯基、C
2-C
6炔基、S-CH
3、NCH
3(CH
3)、OCH
2CH
2OCH
3、-O-烷基氨基和(CH
2)
rR
8;其中R
8选自OH、卤素、甲氧基、乙氧基、N
3、C
2-C
6烯基和C
2-C
6炔基,r=1、2或3;
R 2 is selected from H, OH, halogen, NH 2 , C 1 -C 6 alkyl, C 1 -C 6 alkoxy, C 2 -C 6 alkenyl, C 2 -C 6 alkynyl, S-CH 3 , NCH 3 (CH 3 ), OCH 2 CH 2 OCH 3 , -O-alkylamino and (CH 2 ) r R 8 ; wherein R 8 is selected from OH, halogen, methoxy, ethoxy, N 3 , C 2 -C 6 alkenyl and C 2 -C 6 alkynyl, r=1, 2 or 3;
任选地,R
1和R
2直接相连成环;
Optionally, R 1 and R 2 are directly connected to form a ring;
B是碱基;B is a base;
M为O或S;M is O or S;
所述式(I’)所示的化学修饰、其互变异构体或其药学上可接受的盐不是
The chemical modification represented by the formula (I'), its tautomer or its pharmaceutically acceptable salt is not
在一些实施方案中,当X为NH-CO时,R
1不是H。
In some embodiments, when X is NH-CO, R is not H.
在一些实施方案中,式(I’)所示的化学修饰选自式(I’-1)所示的化学修饰:In some embodiments, the chemical modification shown in formula (I') is selected from the chemical modification shown in formula (I'-1):
其中:Y选自O、NH和S;Wherein: Y is selected from O, NH and S;
每个X独立地选自CR
4(R
4’)、S、NR
5和NH-CO,其中R
4、R
4’、R
5分别独立地为H或C
1-C
6烷基;
Each X is independently selected from CR 4 (R 4 '), S, NR 5 and NH-CO, wherein R 4 , R 4 ', R 5 are independently H or C 1 -C 6 alkyl;
每个J
1、J
2分别独立地为H或C
1-C
6烷基;
Each J 1 and J 2 are independently H or C 1 -C 6 alkyl;
n=0、1或2;m=0、1或2;s=0或1;n=0, 1 or 2; m=0, 1 or 2; s=0 or 1;
R
3选自H、OH、卤素、NH
2、C
1-C
6烷基、C
1-C
6烷氧基、C
2-C
6烯基、C
2-C
6炔基、S-CH
3、NCH
3(CH
3)、OCH
2CH
2OCH
3、-O-烷基氨基和(CH
2)
pR
6;其中R
6选自OH、卤素、甲氧基、乙氧基、N
3、C
2-C
6烯基和C
2-C
6炔基,p=1、2或3;
R 3 is selected from H, OH, halogen, NH 2 , C 1 -C 6 alkyl, C 1 -C 6 alkoxy, C 2 -C 6 alkenyl, C 2 -C 6 alkynyl, S-CH 3 , NCH 3 (CH 3 ), OCH 2 CH 2 OCH 3 , -O-alkylamino and (CH 2 ) p R 6 ; wherein R 6 is selected from OH, halogen, methoxy, ethoxy, N 3 , C 2 -C 6 alkenyl and C 2 -C 6 alkynyl, p=1, 2 or 3;
R
1选自H、C
1-C
6烷基、C
1-C
6烷氧基、C
2-C
6烯基、C
2-C
6炔基和(CH
2)
qR
7;其中R
7选自OH、卤素、甲氧基、乙氧基、N
3、C
2-C
6烯基和C
2-C
6炔基,q=1、2或3;
R 1 is selected from H, C 1 -C 6 alkyl, C 1 -C 6 alkoxy, C 2 -C 6 alkenyl, C 2 -C 6 alkynyl and (CH 2 ) q R 7 ; wherein R 7 selected from OH, halogen, methoxy, ethoxy, N 3 , C 2 -C 6 alkenyl and C 2 -C 6 alkynyl, q=1, 2 or 3;
R
2选自H、OH、卤素、NH
2、C
1-C
6烷基、C
1-C
6烷氧基、C
2-C
6烯基、C
2-C
6炔基、S-CH
3、NCH
3(CH
3)、OCH
2CH
2OCH
3、-O-烷基氨基和(CH
2)
rR
8;其中R
8选自OH、卤素、甲氧基、乙氧基、N
3、C
2-C
6烯基和C
2-C
6炔基,r=1、2或3;
R 2 is selected from H, OH, halogen, NH 2 , C 1 -C 6 alkyl, C 1 -C 6 alkoxy, C 2 -C 6 alkenyl, C 2 -C 6 alkynyl, S-CH 3 , NCH 3 (CH 3 ), OCH 2 CH 2 OCH 3 , -O-alkylamino and (CH 2 ) r R 8 ; wherein R 8 is selected from OH, halogen, methoxy, ethoxy, N 3 , C 2 -C 6 alkenyl and C 2 -C 6 alkynyl, r=1, 2 or 3;
M为O或S;M is O or S;
任选地,R
1和R
2直接相连成环;
Optionally, R 1 and R 2 are directly connected to form a ring;
B如式(I’)中所定义。B is as defined in formula (I').
在一些实施方案中,B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,式(I’)所示的化学修饰选自式(I’-2)所示的化学修饰:In some embodiments, the chemical modification shown in formula (I') is selected from the chemical modification shown in formula (I'-2):
其中,Y选自O、NH和S;Wherein, Y is selected from O, NH and S;
每个X独立地选自CR
4(R
4’)、S、NR
5和NH-CO,其中R
4、R
4’、R
5分别独立地为H或C
1-C
6烷基;
Each X is independently selected from CR 4 (R 4 '), S, NR 5 and NH-CO, wherein R 4 , R 4 ', R 5 are independently H or C 1 -C 6 alkyl;
n=0、1或2;m=0、1或2;s=0或1;n=0, 1 or 2; m=0, 1 or 2; s=0 or 1;
每个J
1、J
2分别独立地为H或C
1-C
6烷基;
Each J 1 and J 2 are independently H or C 1 -C 6 alkyl;
R
3选自H、OH、卤素、NH
2、C
1-C
6烷基、C
1-C
6烷氧基、C
2-C
6烯基、C
2-C
6炔基、S-CH
3、NCH
3(CH
3)、OCH
2CH
2OCH
3、-O-烷基氨基和(CH
2)
pR
6;其中R
6选自OH、卤素、甲氧基、乙氧基、N
3、C
2-C
6烯基和C
2-C
6炔基,p=1、2或3;
R 3 is selected from H, OH, halogen, NH 2 , C 1 -C 6 alkyl, C 1 -C 6 alkoxy, C 2 -C 6 alkenyl, C 2 -C 6 alkynyl, S-CH 3 , NCH 3 (CH 3 ), OCH 2 CH 2 OCH 3 , -O-alkylamino and (CH 2 ) p R 6 ; wherein R 6 is selected from OH, halogen, methoxy, ethoxy, N 3 , C 2 -C 6 alkenyl and C 2 -C 6 alkynyl, p=1, 2 or 3;
R
1选自H、C
1-C
6烷基、C
1-C
6烷氧基、C
2-C
6烯基、C
2-C
6炔基和(CH
2)
qR
7;其中R
7选自OH、卤素、甲氧基、乙氧基、N
3、C
2-C
6烯基和C
2-C
6炔基,q=1、2或3;
R 1 is selected from H, C 1 -C 6 alkyl, C 1 -C 6 alkoxy, C 2 -C 6 alkenyl, C 2 -C 6 alkynyl and (CH 2 ) q R 7 ; wherein R 7 selected from OH, halogen, methoxy, ethoxy, N 3 , C 2 -C 6 alkenyl and C 2 -C 6 alkynyl, q=1, 2 or 3;
R
2选自H、C
1-C
6烷基、C
1-C
6烷氧基、S-CH
3、NCH
3(CH
3)、OCH
2CH
2OCH
3、-O-烷基氨基和(CH
2)
rR
8;其中R
8选自OH、卤素、甲氧基、乙氧基、N
3、C
2-C
6烯基和C
2-C
6炔基;r=1、2或3;
R 2 is selected from H, C 1 -C 6 alkyl, C 1 -C 6 alkoxy, S-CH 3 , NCH 3 (CH 3 ), OCH 2 CH 2 OCH 3 , -O-alkylamino and ( CH 2 ) r R 8 ; wherein R 8 is selected from OH, halogen, methoxy, ethoxy, N 3 , C 2 -C 6 alkenyl and C 2 -C 6 alkynyl; r=1, 2 or 3 ;
任选地,R
1和R
2直接相连成环;
Optionally, R 1 and R 2 are directly connected to form a ring;
M为O或S;M is O or S;
B如式(I’)中所定义。B is as defined in formula (I').
在一些实施方案中,B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,每个X独立地选自CR
4(R
4’)、S、NR
5和NH-CO,其中R
4、R
4’、R
5分别独立地为H或C
1-C
3烷基;
In some embodiments, each X is independently selected from CR 4 (R 4 '), S, NR 5 and NH-CO, wherein R 4 , R 4 ', R 5 are each independently H or C 1 -C 3 alkyl groups;
n=0、1或2;m=0、1或2;s=0或1;n=0, 1 or 2; m=0, 1 or 2; s=0 or 1;
每个J
1、J
2分别独立地为H或C
1-C
3烷基;
Each J 1 and J 2 are independently H or C 1 -C 3 alkyl;
R
3选自H、OH、卤素、NH
2、C
1-C
3烷基、C
1-C
3烷氧基、C
2-C
4烯基、C
2-C
4炔基、S-CH
3、NCH
3(CH
3)、OCH
2CH
2OCH
3、-O-烷基氨基和(CH
2)
pR
6;其中R
6选自OH、卤素、甲氧基、乙氧基、N
3、C
2-C
6烯基和C
2-C
6炔基,p=1、2或3;
R 3 is selected from H, OH, halogen, NH 2 , C 1 -C 3 alkyl, C 1 -C 3 alkoxy, C 2 -C 4 alkenyl, C 2 -C 4 alkynyl, S-CH 3 , NCH 3 (CH 3 ), OCH 2 CH 2 OCH 3 , -O-alkylamino and (CH 2 ) p R 6 ; wherein R 6 is selected from OH, halogen, methoxy, ethoxy, N 3 , C 2 -C 6 alkenyl and C 2 -C 6 alkynyl, p=1, 2 or 3;
R
1选自H、C
1-C
3烷基、C
1-C
3烷氧基、C
2-C
4烯基、C
2-C
4炔基和(CH
2)
qR
7;其中R
7选自OH、卤素、甲氧基、乙氧基、N
3、C
2-C
4烯基和C
2-C
4炔基,q=1、2或3;
R 1 is selected from H, C 1 -C 3 alkyl, C 1 -C 3 alkoxy, C 2 -C 4 alkenyl, C 2 -C 4 alkynyl and (CH 2 ) q R 7 ; wherein R 7 selected from OH, halogen, methoxy, ethoxy, N 3 , C 2 -C 4 alkenyl and C 2 -C 4 alkynyl, q=1, 2 or 3;
R
2选自H、OH、卤素、NH
2、C
1-C
3烷基、C
1-C
3烷氧基、C
2-C
4烯基、C
2-C
4炔基、S-CH
3、NCH
3(CH
3)、OCH
2CH
2OCH
3、-O-烷基氨基和(CH
2)
rR
8;其中R
8选自OH、卤素、甲氧基、乙氧基、N
3、C
2-C
4烯基和C
2-C
4炔基,r=1、2或3;
R 2 is selected from H, OH, halogen, NH 2 , C 1 -C 3 alkyl, C 1 -C 3 alkoxy, C 2 -C 4 alkenyl, C 2 -C 4 alkynyl, S-CH 3 , NCH 3 (CH 3 ), OCH 2 CH 2 OCH 3 , -O-alkylamino and (CH 2 ) r R 8 ; wherein R 8 is selected from OH, halogen, methoxy, ethoxy, N 3 , C 2 -C 4 alkenyl and C 2 -C 4 alkynyl, r=1, 2 or 3;
任选地,R
1和R
2直接相连成环;
Optionally, R 1 and R 2 are directly connected to form a ring;
B如式(I’)中所定义。B is as defined in formula (I').
在一些实施方案中,B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,每个X独立地选自CR
4(R
4’)、S、NR
5和NH-CO,其中R
4、R
4’、R
5分别独立地为H、甲基、乙基、正丙基或异丙基;
In some embodiments, each X is independently selected from CR 4 (R 4 '), S, NR 5 , and NH-CO, wherein R 4 , R 4 ', and R 5 are each independently H, methyl, ethyl radical, n-propyl or isopropyl;
n=0、1或2;m=0、1或2;s=0或1;n=0, 1 or 2; m=0, 1 or 2; s=0 or 1;
每个J
1、J
2分别独立地为H或甲基;
Each J 1 and J 2 are independently H or methyl;
R
3选自H、OH、F、Cl、NH
2、甲基、乙基、正丙基、异丙基、甲氧基、乙氧基、正丙氧基、异丙氧基、乙烯基、烯丙基、乙炔基、炔丙基、S-CH
3、NCH
3(CH
3)、OCH
2CH
2OCH
3、-O-甲基氨基、-O-乙基氨基和(CH
2)
pR
6;其中R
6选自OH、F、Cl、甲氧基、乙氧基、N
3、乙烯基、烯丙基、乙炔基和炔丙基,p=1或2;
R 3 is selected from H, OH, F, Cl, NH 2 , methyl, ethyl, n-propyl, isopropyl, methoxy, ethoxy, n-propoxy, isopropoxy, vinyl, Allyl, ethynyl, propargyl, S-CH 3 , NCH 3 (CH 3 ), OCH 2 CH 2 OCH 3 , -O-methylamino, -O-ethylamino, and (CH 2 ) p R 6 ; wherein R 6 is selected from OH, F, Cl, methoxy, ethoxy, N 3 , vinyl, allyl, ethynyl and propargyl, p=1 or 2;
R
1选自H、甲基、乙基、正丙基、异丙基、甲氧基、乙氧基、正丙氧基、异丙氧基、乙烯基、烯丙基、乙炔基、炔丙基和(CH
2)
qR
7;其中R
7选自OH、F、Cl、甲氧基、乙氧基、N
3、乙烯基、烯丙基、乙炔基和炔丙基,q=1或2;
R is selected from H, methyl, ethyl, n-propyl, isopropyl, methoxy, ethoxy, n-propoxy, isopropoxy, vinyl, allyl, ethynyl, propargyl and (CH 2 ) q R 7 ; wherein R 7 is selected from OH, F, Cl, methoxy, ethoxy, N 3 , vinyl, allyl, ethynyl and propargyl, q=1 or 2;
R
2选自H、OH、F、Cl、NH
2、甲基、乙基、正丙基、异丙基、甲氧基、乙氧基、正丙氧基、异丙氧基、乙烯基、烯丙基、乙炔基、炔丙基、S-CH
3、NCH
3(CH
3)、OCH
2CH
2OCH
3、-O-甲基氨基、-O-乙基氨基和(CH
2)
rR
8;其中R
8选自OH、F、Cl、甲氧基、乙氧基、N
3、乙烯基、烯丙基、乙炔基和炔丙基,r=1或2;
R 2 is selected from H, OH, F, Cl, NH 2 , methyl, ethyl, n-propyl, isopropyl, methoxy, ethoxy, n-propoxy, isopropoxy, vinyl, Allyl, ethynyl, propargyl, S-CH 3 , NCH 3 (CH 3 ), OCH 2 CH 2 OCH 3 , -O-methylamino, -O-ethylamino, and (CH 2 ) r R 8 ; wherein R 8 is selected from OH, F, Cl, methoxy, ethoxy, N 3 , vinyl, allyl, ethynyl and propargyl, r=1 or 2;
任选地,R
1和R
2直接相连成环;
Optionally, R 1 and R 2 are directly connected to form a ring;
B如式(I’)中所定义。B is as defined in formula (I').
在一些实施方案中,B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,每个X独立地选自CR
4(R
4’)、S、NR
5和NH-CO,其中R
4、R
4’、R
5分别独立地为H、甲基、乙基、正丙基或异丙基;
In some embodiments, each X is independently selected from CR 4 (R 4 '), S, NR 5 , and NH-CO, wherein R 4 , R 4 ', and R 5 are each independently H, methyl, ethyl radical, n-propyl or isopropyl;
n=0、1或2;m=0、1或2;s=0或1;n=0, 1 or 2; m=0, 1 or 2; s=0 or 1;
每个J
1、J
2分别独立地为H或甲基;
Each J 1 and J 2 are independently H or methyl;
R
3选自H、OH、F、Cl、NH
2、甲基、乙基、正丙基、异丙基、甲氧基、乙氧基、正丙氧基、异丙氧基、乙烯基、烯丙基、乙炔基、炔丙基、S-CH
3、NCH
3(CH
3)、OCH
2CH
2OCH
3、-O-甲基氨基、-O-乙基氨基和(CH
2)
pR
6;其中R
6选自OH、F、Cl、甲氧基、乙氧基、N
3、乙烯基、烯丙基、乙炔基和炔丙基,p=1或2;
R 3 is selected from H, OH, F, Cl, NH 2 , methyl, ethyl, n-propyl, isopropyl, methoxy, ethoxy, n-propoxy, isopropoxy, vinyl, Allyl, ethynyl, propargyl, S-CH 3 , NCH 3 (CH 3 ), OCH 2 CH 2 OCH 3 , -O-methylamino, -O-ethylamino, and (CH 2 ) p R 6 ; wherein R 6 is selected from OH, F, Cl, methoxy, ethoxy, N 3 , vinyl, allyl, ethynyl and propargyl, p=1 or 2;
R
1选自H、甲基、乙基、正丙基、异丙基、甲氧基、乙氧基、正丙氧基、异丙氧基、乙烯基、烯丙基、乙炔基、炔丙基和(CH
2)
qR
7;其中R
7选自OH、F、Cl、甲氧基、乙氧基、N
3、乙烯基、烯丙基、乙炔基和炔丙基,q=1或2;
R is selected from H, methyl, ethyl, n-propyl, isopropyl, methoxy, ethoxy, n-propoxy, isopropoxy, vinyl, allyl, ethynyl, propargyl and (CH 2 ) q R 7 ; wherein R 7 is selected from OH, F, Cl, methoxy, ethoxy, N 3 , vinyl, allyl, ethynyl and propargyl, q=1 or 2;
R
2选自H、OH、F、Cl、NH
2、甲基、乙基、正丙基、异丙基、甲氧基、乙氧基、正丙氧基、异丙氧基、乙烯基、烯丙基、乙炔基、炔丙基、S-CH
3、NCH
3(CH
3)、OCH
2CH
2OCH
3、-O-甲基氨基、-O-乙基氨基和(CH
2)
rR
8;其中R
8选自OH、F、Cl、甲氧基、乙氧基、N
3、乙烯基、烯丙基、乙炔基和炔丙基,r=1或2;
R 2 is selected from H, OH, F, Cl, NH 2 , methyl, ethyl, n-propyl, isopropyl, methoxy, ethoxy, n-propoxy, isopropoxy, vinyl, Allyl, ethynyl, propargyl, S-CH 3 , NCH 3 (CH 3 ), OCH 2 CH 2 OCH 3 , -O-methylamino, -O-ethylamino, and (CH 2 ) r R 8 ; wherein R 8 is selected from OH, F, Cl, methoxy, ethoxy, N 3 , vinyl, allyl, ethynyl and propargyl, r=1 or 2;
任选地,R
1和R
2直接相连成环;
Optionally, R 1 and R 2 are directly connected to form a ring;
B如式(I’)中所定义。B is as defined in formula (I').
在一些实施方案中,B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,Y为O或NH;每个X独立地选自NH-CO、CH
2和NH;
In some embodiments, Y is O or NH; each X is independently selected from NH-CO, CH and NH;
n=0或1;m=0或1;s=0或1;n=0 or 1; m=0 or 1; s=0 or 1;
每个J
1、J
2分别独立地为H;
Each of J 1 and J 2 is independently H;
R
1选自H、甲基和CH
2OH;
R 1 is selected from H, methyl and CH 2 OH;
R
2选自H、OH、NH
2、甲基和CH
2OH;
R 2 is selected from H, OH, NH 2 , methyl and CH 2 OH;
R
3选自H、OH、NH
2、甲基和CH
2OH;
R 3 is selected from H, OH, NH 2 , methyl and CH 2 OH;
任选地,R
1和R
2直接相连成环;
Optionally, R 1 and R 2 are directly connected to form a ring;
B如式(I’)中所定义。B is as defined in formula (I').
在一些实施方案中,B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,Y为O或NH;每个X独立地选自NH-CO、CH
2和NH;
In some embodiments, Y is O or NH; each X is independently selected from NH-CO, CH and NH;
n=0或1;m=0或1;s=0或1;n=0 or 1; m=0 or 1; s=0 or 1;
每个J
1、J
2分别独立地为H;
Each of J 1 and J 2 is independently H;
R
1选自H、甲基和CH
2OH;
R 1 is selected from H, methyl and CH 2 OH;
R
2选自H、甲基和CH
2OH;
R 2 is selected from H, methyl and CH 2 OH;
R
3选自H、OH、NH
2、甲基和CH
2OH;
R 3 is selected from H, OH, NH 2 , methyl and CH 2 OH;
任选地,R
1和R
2直接相连成环;
Optionally, R 1 and R 2 are directly connected to form a ring;
B如式(I’)中所定义。B is as defined in formula (I').
在一些实施方案中,B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,Y为O或NH;In some embodiments, Y is O or NH;
每个X独立地选自CR
4(R
4’)、NR
5和NH-CO,R
4、R
4’、R
5分别独立地为H或C
1-C
6烷基;
Each X is independently selected from CR 4 (R 4 '), NR 5 and NH-CO, R 4 , R 4 ', R 5 are independently H or C 1 -C 6 alkyl;
J
2为H或C
1-C
6烷基;
J 2 is H or C 1 -C 6 alkyl;
n=0或1;m=0或1;s=0或1;n=0 or 1; m=0 or 1; s=0 or 1;
R
3选自H、OH、NH
2、C
1-C
6烷基、C
1-C
6烷氧基和(CH
2)
pR
6;R
6选自OH、 甲氧基和乙氧基,p=1、2或3;
R 3 is selected from H, OH, NH 2 , C 1 -C 6 alkyl, C 1 -C 6 alkoxy and (CH 2 ) p R 6 ; R 6 is selected from OH, methoxy and ethoxy, p = 1, 2 or 3;
R
1选自H、OH、C
1-C
6烷基、C
1-C
6烷氧基和(CH
2)
qR
7;R
7选自OH、甲氧基和乙氧基,q=1、2或3;
R 1 is selected from H, OH, C 1 -C 6 alkyl, C 1 -C 6 alkoxy and (CH 2 ) q R 7 ; R 7 is selected from OH, methoxy and ethoxy, q=1 , 2 or 3;
J
1为H或C
1-C
6烷基;
J 1 is H or C 1 -C 6 alkyl;
R
2选自H、OH、C
1-C
6烷基、C
1-C
6烷氧基和(CH
2)
rR
8;R
8选自OH、甲氧基和乙氧基,r=1、2或3;
R 2 is selected from H, OH, C 1 -C 6 alkyl, C 1 -C 6 alkoxy and (CH 2 ) r R 8 ; R 8 is selected from OH, methoxy and ethoxy, r=1 , 2 or 3;
任选地,R
1和R
2直接相连成3-6元环;
Optionally, R 1 and R 2 are directly connected to form a 3-6 membered ring;
M为O或S;M is O or S;
B是碱基;B is a base;
所述式(I’)所示的化学修饰、其互变异构体或其药学上可接受的盐不是
The chemical modification represented by the formula (I'), its tautomer or its pharmaceutically acceptable salt is not
在一些实施方案中,X独立地选自CR
4(R
4’)和NH-CO。
In some embodiments, X is independently selected from CR 4 (R 4 ′) and NH—CO.
在一些实施方案中,X独立地选自CR
4(R
4’)。
In some embodiments, X is independently selected from CR 4 (R 4 ′).
在一些实施方案中,R
3选自H、C
1-C
6烷基和(CH
2)
pR
6。
In some embodiments, R 3 is selected from H, C 1 -C 6 alkyl, and (CH 2 ) p R 6 .
在一些实施方案中,R
3选自H和C
1-C
6烷基。
In some embodiments, R 3 is selected from H and C 1 -C 6 alkyl.
在一些实施方案中,R
1选自H、C
1-C
6烷基和(CH
2)
qR
7。
In some embodiments, R 1 is selected from H, C 1 -C 6 alkyl, and (CH 2 ) q R 7 .
在一些实施方案中,R
1选自H和C
1-C
6烷基。
In some embodiments, R 1 is selected from H and C 1 -C 6 alkyl.
在一些实施方案中,R
2选自H、OH、C
1-C
6烷基和(CH
2)
rR
8。
In some embodiments, R 2 is selected from H, OH, C 1 -C 6 alkyl, and (CH 2 ) r R 8 .
在一些实施方案中,R
2选自H、C
1-C
6烷基和(CH
2)
rR
8。
In some embodiments, R 2 is selected from H, C 1 -C 6 alkyl, and (CH 2 ) r R 8 .
在一些实施方案中,Y为O;In some embodiments, Y is O;
每个X独立地选自CR
4(R
4’)和NH-CO,R
4和R
4’分别独立地为H或C
1-C
6烷基;
Each X is independently selected from CR 4 (R 4 ') and NH-CO, R 4 and R 4 ' are independently H or C 1 -C 6 alkyl;
J
2为H或C
1-C
6烷基;
J 2 is H or C 1 -C 6 alkyl;
R
3选自H、C
1-C
6烷基和(CH
2)
pR
6;R
6选自OH,p=1、2或3;
R 3 is selected from H, C 1 -C 6 alkyl and (CH 2 ) p R 6 ; R 6 is selected from OH, p=1, 2 or 3;
R
1选自H、C
1-C
6烷基和(CH
2)
qR
7;R
7选自OH,q=1、2或3;
R 1 is selected from H, C 1 -C 6 alkyl and (CH 2 ) q R 7 ; R 7 is selected from OH, q=1, 2 or 3;
J
1为H或C
1-C
6烷基;
J 1 is H or C 1 -C 6 alkyl;
R
2选自H、OH、C
1-C
6烷基和(CH
2)
rR
8;R
8选自OH,r=1、2或3;
R 2 is selected from H, OH, C 1 -C 6 alkyl and (CH 2 ) r R 8 ; R 8 is selected from OH, r=1, 2 or 3;
任选地,R
1和R
2直接相连成5-6元环;
Optionally, R 1 and R 2 are directly connected to form a 5-6 membered ring;
M为O或S;M is O or S;
B是碱基。B is a base.
在一些实施方案中,B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,Y为O;In some embodiments, Y is O;
每个X独立地选自CR
4(R
4’),R
4和R
4’分别独立地为H或C
1-C
6烷基;
Each X is independently selected from CR 4 (R 4 '), R 4 and R 4 ' are independently H or C 1 -C 6 alkyl;
J
2为H;
J 2 is H;
R
3选自H和C
1-C
6烷基;
R 3 is selected from H and C 1 -C 6 alkyl;
R
1选自H和C
1-C
6烷基;
R 1 is selected from H and C 1 -C 6 alkyl;
J
1为H或C
1-C
6烷基;
J 1 is H or C 1 -C 6 alkyl;
R
2选自H、C
1-C
6烷基和(CH
2)
rR
8;R
8选自OH,r=1、2或3;
R 2 is selected from H, C 1 -C 6 alkyl and (CH 2 ) r R 8 ; R 8 is selected from OH, r=1, 2 or 3;
任选地,R
1和R
2直接相连成5-6元环;
Optionally, R 1 and R 2 are directly connected to form a 5-6 membered ring;
M为O或S;M is O or S;
B是碱基。B is a base.
在一些实施方案中,B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,Y为O。In some embodiments, Y is O.
在一些实施方案中,X独立地选自CR
4(R
4’)、NR
5和NH-CO,R
4、R
4’、R
5分别独立地为H、甲基、乙基、正丙基或异丙基。在一些实施方案中,X独立地选自NH-CO、CH
2和NH。在一些实施方案中,X独立地选自NH-CO和CH
2。在一些实施方案中,X为CH
2。
In some embodiments, X is independently selected from CR 4 (R 4 '), NR 5 and NH-CO, R 4 , R 4 ', and R 5 are independently H, methyl, ethyl, n-propyl or isopropyl. In some embodiments, X is independently selected from NH—CO, CH 2 and NH. In some embodiments, X is independently selected from NH—CO and CH 2 . In some embodiments, X is CH2 .
在一些实施方案中,J
2为H或甲基。在一些实施方案中,J
2为H。
In some embodiments, J 2 is H or methyl. In some embodiments, J is H.
在一些实施方案中,R
3选自H、OH、NH
2、甲基、乙基、正丙基、异丙基、甲氧基、乙氧基、正丙氧基、异丙氧基和(CH
2)
pR
6,R
6选自OH、甲氧基和乙氧基,p=1或2。在一些实施方案中,R
3选自H、甲基、乙基、正丙基、异丙基和(CH
2)
pR
6,R
6选自OH,p=1或2。在一些实施方案中,R
3选自H和甲基。
In some embodiments, R 3 is selected from H, OH, NH 2 , methyl, ethyl, n-propyl, isopropyl, methoxy, ethoxy, n-propoxy, isopropoxy, and ( CH 2 ) p R 6 , R 6 is selected from OH, methoxy and ethoxy, p=1 or 2. In some embodiments, R 3 is selected from H, methyl, ethyl, n-propyl, isopropyl, and (CH 2 ) p R 6 , R 6 is selected from OH, and p=1 or 2. In some embodiments, R is selected from H and methyl.
在一些实施方案中,R
1选自H、OH、甲基、乙基、正丙基、异丙基、甲氧基、乙氧基、正丙氧基、异丙氧基和(CH
2)
qR
7,R
7选自OH,q=1或2。在一些实施方案中,R
1选自H、甲基、乙基、正丙基、异丙基和(CH
2)
qR
7,R
7选自OH,q=1或2。在一些实施方案中,R
1选自H和甲基。
In some embodiments, R 1 is selected from H, OH, methyl, ethyl, n-propyl, isopropyl, methoxy, ethoxy, n-propoxy, isopropoxy, and (CH 2 ) q R 7 , R 7 is selected from OH, q=1 or 2. In some embodiments, R 1 is selected from H, methyl, ethyl, n-propyl, isopropyl, and (CH 2 ) q R 7 , R 7 is selected from OH, and q=1 or 2. In some embodiments, R 1 is selected from H and methyl.
在一些实施方案中,R
2选自H、OH、甲基、乙基、正丙基、异丙基、甲氧基、乙氧基、正丙氧基、异丙氧基和(CH
2)
rR
8,R
8选自OH,r=1或2。在一些实施方案中,R
2选自H、OH、甲基、乙基、正丙基、异丙基和(CH
2)
rR
8,R
8选自OH,r=1或2。在一些实施方案中,R
2选自H、甲基和CH
2OH。
In some embodiments, R is selected from H, OH, methyl, ethyl, n-propyl, isopropyl, methoxy, ethoxy, n-propoxy, isopropoxy, and (CH 2 ) r R 8 , R 8 is selected from OH, r=1 or 2. In some embodiments, R 2 is selected from H, OH, methyl, ethyl, n-propyl, isopropyl, and (CH 2 ) r R 8 , R 8 is selected from OH, and r=1 or 2. In some embodiments, R2 is selected from H, methyl, and CH2OH .
在一些实施方案中,R
1和R
2直接相连成5-6元环。在一些实施方案中,R
1和R
2直接相连形成3-6元环烷基。在一些实施方案中,R
1和R
2直接相连形成环戊基或环己基。
In some embodiments, R1 and R2 are directly linked to form a 5-6 membered ring. In some embodiments, R and R are directly connected to form a 3-6 membered cycloalkyl. In some embodiments, R 1 and R 2 are directly connected to form cyclopentyl or cyclohexyl.
在一些实施方案中,所述式(I’)所示的化学修饰选自以下任一结构:In some embodiments, the chemical modification represented by the formula (I') is selected from any of the following structures:
其中:M为O或S;Among them: M is O or S;
B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯。B is selected from purine bases, pyrimidine bases, indole, 5-nitroindole and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,所述式(I’)所示的化学修饰选自以下任一结构:In some embodiments, the chemical modification represented by the formula (I') is selected from any of the following structures:
其中:M为O或S;Among them: M is O or S;
B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯。B is selected from purine bases, pyrimidine bases, indole, 5-nitroindole and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,所述式(I’)所示的化学修饰选自以下任一结构:In some embodiments, the chemical modification represented by the formula (I') is selected from any of the following structures:
其中:M为O或S;Among them: M is O or S;
B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯。B is selected from purine bases, pyrimidine bases, indole, 5-nitroindole and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same base as if the nucleotide at that position on the antisense strand was unmodified.
在一些实施方案中,所述式(I’)所示的化学修饰选自以下任一结构:In some embodiments, the chemical modification represented by the formula (I') is selected from any of the following structures:
以及它们结构中的腺嘌呤被置换为鸟嘌呤、胞嘧啶、尿嘧啶或胸腺嘧啶的那些。
and those in which the adenine in their structure is replaced by guanine, cytosine, uracil or thymine.
在一些实施方案中,B选自嘌呤碱基、嘧啶碱基、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from the group consisting of purine bases, pyrimidine bases, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、异鸟嘌呤、次黄嘌呤、黄嘌呤、C2修饰的嘌呤、N8修饰的嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、N6-烷基腺嘌呤、O6-烷基鸟嘌呤、7-脱氮嘌呤、胞嘧啶、5-甲基胞嘧啶、异胞嘧啶、假胞嘧啶、尿嘧啶、假尿嘧啶、2-硫代尿苷、4-硫代尿苷、C5修饰的嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, isoguanine, hypoxanthine, xanthine, C2 modified purine, N8 modified purine, 2,6-diaminopurine, 6-dimethylamino Purine, 2-aminopurine, N6-alkyladenine, O6-alkylguanine, 7-deazapurine, cytosine, 5-methylcytosine, isocytosine, pseudocytosine, uracil, pseudourine Pyrimidine, 2-thiouridine, 4-thiouridine, C5-modified pyrimidine, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, B is selected from adenine, guanine, 2,6-diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5- Nitroindole and 3-nitropyrrole.
在一些实施方案中,B与所述反义链该位置处核苷酸未被修饰时的碱基相同。In some embodiments, B is the same as the base of the antisense strand when the nucleotide at this position is unmodified.
在一些实施方案中,L
1为C
1-C
30烷基链、或包含被一个或多个氧、硫、氮原子或C=O间断的C
1-C
30烷基链;
In some embodiments, L is a C 1 -C 30 alkyl chain, or comprises a C 1 -C 30 alkyl chain interrupted by one or more oxygen, sulfur, nitrogen atoms, or C=O;
R
11和R
12独立地为化学键、NR
16或C=O;
R 11 and R 12 are independently chemical bonds, NR 16 or C=O;
R
13为CR
17R
18、NR
16、O或S;
R 13 is CR 17 R 18 , NR 16 , O or S;
R
14为CR
19;
R 14 is CR 19 ;
R
15独立地为CR
17R
18、NR
16或O;
R 15 is independently CR 17 R 18 , NR 16 or O;
R
16至R
19独立地为氢、氘或烷基;
R 16 to R 19 are independently hydrogen, deuterium or alkyl;
m1、p1和q1独立地为0、1、2、3或4;m1, p1 and q1 are independently 0, 1, 2, 3 or 4;
R
b5、R
b6和R
b7独立地为-C(=O)-、-NHC(=O)-、-C(=O)O-、-C(=O)-(CH
2)
z8-O-或-NHC(=O)-(CH
2)
z9-O-;
R b5 , R b6 and R b7 are independently -C(=O)-, -NHC(=O)-, -C(=O)O-, -C(=O)-(CH 2 ) z8 -O -or-NHC(=O)-(CH 2 ) z9 -O-;
z5、z6、z7、z8和z9独立地为0-10的整数;z5, z6, z7, z8 and z9 are independently an integer of 0-10;
L
2为C
1-C
30烷基链、或包含被一个或多个氧、硫、氮原子或C=O间断的C
1-C
30烷基链;
L 2 is a C 1 -C 30 alkyl chain, or contains a C 1 -C 30 alkyl chain interrupted by one or more oxygen, sulfur, nitrogen atoms or C=O;
r1为1-10的整数。r1 is an integer of 1-10.
在一些实施方案中,L
1为-(CH
2)
j11-C(=O)-(CH
2)
j12-;
In some embodiments, L 1 is -(CH 2 ) j11 -C(=O)-(CH 2 ) j12 -;
R
11和R
12独立地为化学键、NR
16或C=O;
R 11 and R 12 are independently chemical bonds, NR 16 or C=O;
R
16为氢或C
1-6烷基;
R 16 is hydrogen or C 1-6 alkyl;
R
13为CR
17R
18或O;
R 13 is CR 17 R 18 or O;
R
14为CR
19;
R 14 is CR 19 ;
R
15独立地为CR
17R
18或O;
R 15 is independently CR 17 R 18 or O;
R
16至R
19独立地为氢或烷基;
R 16 to R 19 are independently hydrogen or alkyl;
m1、p1和q1独立地为0或1;m1, p1 and q1 are independently 0 or 1;
R
b5、R
b6和R
b7独立地为-C(=O)-(CH
2)
z8-O-或-NHC(=O)-(CH
2)
z9-O-;
R b5 , R b6 and R b7 are independently -C(=O)-(CH 2 ) z8 -O- or -NHC(=O)-(CH 2 ) z9 -O-;
z8和z9独立地为0-10的整数;z8 and z9 are independently an integer of 0-10;
L
2为-(CH
2)
j15-(OCH
2CH
2)
1-4-(CH
2)
j16-或
L 2 is -(CH 2 ) j15 -(OCH 2 CH 2 ) 1-4 -(CH 2 ) j16 - or
j15和j16独立地为0-4的整数;j15 and j16 are independently an integer of 0-4;
r1为3、4、5或6。r1 is 3, 4, 5 or 6.
在一些实施方案中,L
1可为L
3或L
3-R
110-R
111-L
3,其中,L
3独立地为C
1-C
12烷基链、-(CH
2)
j11-C(=O)-(CH
2)
j12-或-(CH
2)
j13-(CH
2CH
2O)
1-4-(CH
2)
j14-,R
110和R
111独立地为化学键、-NR
112-、-C(=O)-或-OC(=O)-,R
112为氢或C
1-C
12烷基,j11、j12、j13和j14独立地为0-10的整数。在一些实施方案中,j11、j12、j13和j14独立地 为0-2或4-10的整数。在一些实施方案中,j11、j12、j13和j14独立地为0、1、2、6、7、8、9或10。
In some embodiments, L 1 can be L 3 or L 3 -R 110 -R 111 -L 3 , wherein L 3 is independently a C 1 -C 12 alkyl chain, -(CH 2 ) j11 -C( =O)-(CH 2 ) j12 -or-(CH 2 ) j13 -(CH 2 CH 2 O) 1-4 -(CH 2 ) j14 -, R 110 and R 111 are independently chemical bonds, -NR 112 - , -C(=O)- or -OC(=O)-, R 112 is hydrogen or C 1 -C 12 alkyl, j11, j12, j13 and j14 are independently integers of 0-10. In some embodiments, j11, j12, j13, and j14 are independently integers from 0-2 or 4-10. In some embodiments, j11, j12, j13, and j14 are independently 0, 1, 2, 6, 7, 8, 9, or 10.
在一些实施方案中,L
1可为-(CH
2)
j11-C(=O)-(CH
2)
j12-,j11和j12的定义同前任一方案所述。
In some embodiments, L 1 can be -(CH 2 ) j11 -C(=O)-(CH 2 ) j12 -, j11 and j12 are as defined in the previous scheme.
在一些实施方案中,L
1可为
j12的定义同前任一方案所述,其中,a1端与B1相连,b1端与R
11相连。
In some embodiments, L can be The definition of j12 is the same as that described in the previous scheme, wherein the terminal a1 is connected to B1, and the terminal b1 is connected to R11 .
在一些实施方案中,L
1可为
其中,a1端与B
1相连,b1端与R
11相连。
In some embodiments, L can be Wherein, terminal a1 is connected to B1 , and terminal b1 is connected to R11 .
在一些实施方案中,R
11可为化学键且R
12可为C=O。
In some embodiments, R 11 can be a chemical bond and R 12 can be C=O.
在一些实施方案中,R
11可为化学键且R
12可为NR
16,R
16的定义同前任一方案所述。
In some embodiments, R 11 can be a chemical bond and R 12 can be NR 16 , and the definition of R 16 is the same as described in any of the previous schemes.
在一些实施方案中,R
11可为化学键且R
12可为-OC(=O)-。
In some embodiments, R 11 can be a chemical bond and R 12 can be -OC(=O)-.
在一些实施方案中,R
11可为NR
16且R
12可为C=O,R
16的定义同前任一方案所述。
In some embodiments, R 11 can be NR 16 and R 12 can be C=O, and R 16 is as defined in the preceding scheme.
在一些实施方案中,R
1可为NR
16且R
12可为-OC(=O)-,R
16的定义同前任一方案所述。
In some embodiments, R 1 can be NR 16 and R 12 can be -OC(=O)-, and R 16 is as defined in any preceding scheme.
在一些实施方案中,R
12可为NR
16且R
11可为C=O,R
16的定义同前任一方案所述。
In some embodiments, R 12 can be NR 16 and R 11 can be C=O, and R 16 is as defined in the preceding scheme.
在一些实施方案中,R
12可为NR
16且R
11可为-OC(=O)-,R
16的定义同前任一方案所述。
In some embodiments, R 12 can be NR 16 and R 11 can be -OC(=O)-, and R 16 is as defined in the preceding scheme.
在一些实施方案中,R
11可为NH且R
12可为C=O。
In some embodiments, R 11 can be NH and R 12 can be C=O.
在一些实施方案中,R
12可为NH且R
11可为C=O。
In some embodiments, R 12 can be NH and R 11 can be C=O.
在一些实施方案中,R
16可为氢或C
1-6烷基。
In some embodiments, R 16 can be hydrogen or C 1-6 alkyl.
在一些实施方案中,R
16可为氢、甲基、乙基、丙基或异丙基。
In some embodiments, R 16 can be hydrogen, methyl, ethyl, propyl, or isopropyl.
在一些实施方案中,R
16可为氢。
In some embodiments, R 16 can be hydrogen.
在一些实施方案中,R
17和R
18可为氢。
In some embodiments, R 17 and R 18 can be hydrogen.
在一些实施方案中,R
19可为氢。
In some embodiments, R 19 can be hydrogen.
在一些实施方案中,环A存在时,环A可为C
6-12芳基。
In some embodiments, ring A, when present, can be a C 6-12 aryl.
在一些实施方案中,环A可为苯基。In some embodiments, ring A can be phenyl.
在一些实施方案中,m1可为0或1。In some embodiments, m1 can be 0 or 1.
在一些实施方案中,m1可为3。In some embodiments, m1 can be 3.
在一些实施方案中,n1可为0或1。In some embodiments, n1 can be 0 or 1.
在一些实施方案中,p1和q1独立地为0或1。In some embodiments, p1 and q1 are independently 0 or 1.
在一些实施方案中,p1=1且q1=1。In some embodiments, p1=1 and q1=1.
在一些实施方案中,p1=1且q1=0。In some embodiments, p1=1 and q1=0.
在一些实施方案中,p1=0且q1=1。In some embodiments, p1=0 and q1=1.
在一些实施方案中,p1=0且q1=0。In some embodiments, p1=0 and q1=0.
在一些实施方案中,z1、z2、z3、z4、z5、z6、z7、z8和z9可独立地为0-4的整数。在一些实施方案中,z1、z2、z3、z4、z5、z6、z7、z8和z9可独立地为0、1或2。In some embodiments, z1, z2, z3, z4, z5, z6, z7, z8, and z9 can independently be an integer from 0-4. In some embodiments, z1, z2, z3, z4, z5, z6, z7, z8, and z9 can be 0, 1, or 2 independently.
在一些实施方案中,B
1可为
R
b1、R
b2、R
b3和R
b4独立地为-C(=O)-或-NHC(=O)-,N原子与L
1相连,z1、z2、z3和z4的定义同前任一方案所述。
In some embodiments, B 1 can be R b1 , R b2 , R b3 and R b4 are independently -C(=O)- or -NHC(=O)-, the N atom is connected to L 1 , and the definitions of z1, z2, z3 and z4 are the same as those of the previous scheme mentioned.
在一些实施方案中,B
1可为
R
b1、R
b2、R
b3和R
b4独立地为-C(=O)-或-NHC(=O)-,N原子与L
1相连,R
b1、R
b3和R
b4相同,z1、z2、z3和z4的定义同前任一方案所述。
In some embodiments, B 1 can be R b1 , R b2 , R b3 and R b4 are independently -C(=O)- or -NHC(=O)-, N atom is connected to L 1 , R b1 , R b3 and R b4 are the same, z1, z2 , z3 and z4 are defined as described in the previous scheme.
在一些实施方案中,B
1可为
R
b5、R
b6和R
b7独立地为-C(=O)-(CH
2)
z8-O-或-NHC(=O)-(CH
2)
z9-O-,N原子与L
1相连,z5、z6、z7、z8和z9的定义同前任一方案所述。
In some embodiments, B 1 can be R b5 , R b6 and R b7 are independently -C(=O)-(CH 2 ) z8 -O- or -NHC(=O)-(CH 2 ) z9 -O-, the N atom is connected to L 1 , The definitions of z5, z6, z7, z8 and z9 are the same as those described in the previous scheme.
在一些实施方案中,B
1可为
R
b5、R
b6和R
b7独立地为-C(=O)-(CH
2)
z8-O-或-NHC(=O)-(CH
2)
z9-O-,N原子与L
1相连,R
b5、R
b6和R
b7相同,z5、z6、z7、z8和z9的定义同前任一方案所述。
In some embodiments, B 1 can be R b5 , R b6 and R b7 are independently -C(=O)-(CH 2 ) z8 -O- or -NHC(=O)-(CH 2 ) z9 -O-, the N atom is connected to L 1 , R b5 , R b6 and R b7 are the same, and the definitions of z5, z6, z7, z8 and z9 are the same as those described in the previous scheme.
在一些实施方案中,L
2可为L
4或L
4-R
13-R
14-L
4,其中,L
4独立地为C
1-C
12烷基链或-(CH
2)
j15-(OCH
2CH
2)
1-4-(CH
2)
j16-,R
113和R
114独立地为化学键、-NR
115-、-C(=O)-或-OC(=O)-,R
115独立地为氢或C
1-C
12烷基,j15和j16独立地为0-10的整数。在一些实施方案中,j15和j16独立地为0-6的整数。在一些实施方案中,j15和j16独立地为0、1、2、3或4。
In some embodiments, L 2 can be L 4 or L 4 -R 13 -R 14 -L 4 , wherein L 4 is independently a C 1 -C 12 alkyl chain or -(CH 2 ) j15 -(OCH 2 CH 2 ) 1-4 -(CH 2 ) j16 -, R 113 and R 114 are independently a chemical bond, -NR 115 -, -C(=O)- or -OC(=O)-, R 115 is independently is hydrogen or C 1 -C 12 alkyl, j15 and j16 are independently an integer of 0-10. In some embodiments, j15 and j16 are independently integers from 0-6. In some embodiments, j15 and j16 are 0, 1, 2, 3 or 4 independently.
在一些实施方案中,L
2可为-(CH
2)
j15-(OCH
2CH
2)
1-4-(CH
2)
j16-,j15和j16的定义同前任一方案所述。
In some embodiments, L 2 can be -(CH 2 ) j15 -(OCH 2 CH 2 ) 1-4 -(CH 2 ) j16 -, j15 and j16 are as defined in the previous scheme.
在一些实施方案中,L
2可为
在一些实施方案中,L
2可为
其中,左侧与O原子相连,右侧与B
1相连。
In some embodiments, L2 can be In some embodiments, L2 can be Among them, the left side is connected with O atom, and the right side is connected with B1 .
在一些实施方案中,L
2可为C
1-C
12烷基链。
In some embodiments, L 2 can be a C 1 -C 12 alkyl chain.
在一些实施方案中,L
2可为
在一些实施方案中,L
2可为
在一些实施方案中,L
2可为
在一些实施方案中,L
2可为
其中,a3端与O原子相连,b3端与B
1相连。
In some embodiments, L2 can be In some embodiments, L2 can be In some embodiments, L2 can be In some embodiments, L2 can be Among them, the a3 end is connected to the O atom, and the b3 end is connected to the B1 .
在一些实施方案中,L
2可为
其中,a3端与O原子相连,b3端与B
1相连。
In some embodiments, L2 can be Among them, the a3 end is connected to the O atom, and the b3 end is connected to the B1 .
在一些实施方案中,r1可为3、4、5或6。在一些实施方案中,r1可为3。In some embodiments, r1 can be 3, 4, 5 or 6. In some embodiments, r1 can be 3.
在一些实施方案中,Q
3可为
在一些实施方案中,Q
3可为
其中,R
13、R
14、R
15和n1的定义同前任一方案所述。
In some embodiments, Q3 can be In some embodiments, Q3 can be Wherein, the definitions of R 13 , R 14 , R 15 and n1 are the same as those described in the previous scheme.
在一些实施方案中,
可为
其中,R
13、R
14、R
15、p1和q1的定义同前任一方案所述。
In some embodiments, Can be Wherein, the definitions of R 13 , R 14 , R 15 , p1 and q1 are the same as those described in the previous scheme.
在一些实施方案中,
可为
其中,R
13、R
14、R
15、p1和q1的定义同前任一方案所述。
In some embodiments, Can be Wherein, the definitions of R 13 , R 14 , R 15 , p1 and q1 are the same as those described in the previous scheme.
在一些实施方案中,
可为
在 一些实施方案中,
可为
在一些实施方案中,
可为
p1和q1的定义同前任一方案所述。
In some embodiments, Can be In some embodiments, Can be In some embodiments, Can be The definitions of p1 and q1 are the same as those described in the previous scheme.
在一些实施方案中,
可为
在一些实施方案中,
可为
在一些实施方案中,
可为
p1和q1的定义同前任一方案所述。
In some embodiments, Can be In some embodiments, Can be In some embodiments, Can be The definitions of p1 and q1 are the same as those described in the previous scheme.
在一些实施方案中,
可为
其中,R
13、R
14、n1、p1和q1的定义同前任一方案所述。
In some embodiments, Can be Wherein, the definitions of R 13 , R 14 , n1, p1 and q1 are the same as those described in the previous scheme.
在一些实施方案中,
可为
其中,R
13、R
14、n1、p1和q1的定义同前任一方案所述。
In some embodiments, Can be Wherein, the definitions of R 13 , R 14 , n1, p1 and q1 are the same as those described in the previous scheme.
在一些实施方案中,
可为
在一些实施方案中,
可为
n1、p1和q1的定义同前任一方案所述。
In some embodiments, Can be In some embodiments, Can be The definitions of n1, p1 and q1 are the same as those described in the previous scheme.
在一些实施方案中,
可为
n1、p1和q1的定义同前任一方案所述。
In some embodiments, Can be The definitions of n1, p1 and q1 are the same as those described in the previous scheme.
在一些实施方案中,所述的配体可为以下任一结构或其药学上可接受的盐,In some embodiments, the ligand can be any of the following structures or a pharmaceutically acceptable salt thereof,
在一些实施方案中,所述的配体可为以下任一结构或其药学上可接受的盐,In some embodiments, the ligand can be any of the following structures or a pharmaceutically acceptable salt thereof,
在一些实施方案中,所述的配体可为以下结构或其药学上可接受的盐,In some embodiments, the ligand can be the following structure or a pharmaceutically acceptable salt thereof,
在一些实施方案中,所述式(I)所示的化学修饰为
B选自鸟嘌呤、腺嘌呤、胞嘧啶和尿嘧啶;且所述配体为如下任一结构或其药学上可接受的盐,
In some embodiments, the chemical modification represented by the formula (I) is B is selected from guanine, adenine, cytosine and uracil; and the ligand is any of the following structures or a pharmaceutically acceptable salt thereof,
在一些实施方案中,所述式(I)所示的化学修饰为
B选自鸟嘌呤、腺嘌呤、胞嘧啶和尿嘧啶,且,所述配体为如下任一结构或其药学上可接受的盐,
In some embodiments, the chemical modification represented by the formula (I) is B is selected from guanine, adenine, cytosine and uracil, and the ligand is any of the following structures or a pharmaceutically acceptable salt thereof,
在一些实施方案中,所述式(I)所示的化学修饰为
B选自鸟嘌呤、腺嘌呤、胞嘧啶和尿嘧啶;且,所述配体为如下结构或其药学上可接受的盐,
In some embodiments, the chemical modification represented by the formula (I) is B is selected from guanine, adenine, cytosine and uracil; and, the ligand is the following structure or a pharmaceutically acceptable salt thereof,
在一些实施方案中,可以N-三氟乙酰基半乳糖胺、N-丙酰基半乳糖胺、N-正丁酰基半乳糖胺或N-异丁酰基半乳糖胺替换以上配体中的N-乙酰基-半乳糖胺部分。In some embodiments, the N- Acetyl-galactosamine moiety.
在一些实施方案中,所述siRNA和所述配体共价或非共价连接。In some embodiments, the siRNA and the ligand are covalently or non-covalently linked.
在一些实施方案中,所述有义链的3’端和/或5’端与所述配体缀合。In some embodiments, the 3' end and/or the 5' end of the sense strand is conjugated to the ligand.
在一些实施方案中,所述有义链的3’端与所述配体缀合。In some embodiments, the 3' end of the sense strand is conjugated to the ligand.
在一些实施方案中,所述配体通过磷酸酯基团或硫代磷酸酯基团与所述siRNA末端连接。In some embodiments, the ligand is attached to the end of the siRNA via a phosphate group or a phosphorothioate group.
在一些实施方案中,所述配体通过磷酸二酯基团或硫代磷酸二酯基团与所述siRNA末端连接。In some embodiments, the ligand is attached to the end of the siRNA via a phosphodiester group or a phosphorothioate group.
在一些实施方案中,所述配体通过磷酸二酯基团与所述siRNA末端连接。In some embodiments, the ligand is attached to the end of the siRNA via a phosphodiester group.
在一些实施方案中,所述配体通过磷酸酯基团或硫代磷酸酯基团与所述siRNA末端间接连接。In some embodiments, the ligand is indirectly linked to the end of the siRNA via a phosphate group or a phosphorothioate group.
在一些实施方案中,所述配体通过磷酸酯基团或硫代磷酸酯基团与所述siRNA末端直接连接。In some embodiments, the ligand is directly attached to the end of the siRNA via a phosphate group or a phosphorothioate group.
在一些实施方案中,所述配体通过磷酸酯基团或硫代磷酸酯基团与所述siRNA的有义链3’末端直接连接。In some embodiments, the ligand is directly linked to the 3' end of the sense strand of the siRNA via a phosphate group or a phosphorothioate group.
在一些实施方案中,所述磷酸酯基团为磷酸一酯基团或磷酸二酯基团。在一些实施方案中,所述磷酸酯基团为磷酸二酯基团。In some embodiments, the phosphate group is a phosphate monoester group or a phosphodiester group. In some embodiments, the phosphate group is a phosphodiester group.
在一些实施方案中,所述硫代磷酸酯基团为硫代磷酸一酯基团或硫代磷酸二酯基团。在一些实施方案中,所述硫代磷酸酯基团为硫代磷酸二酯基团。In some embodiments, the phosphorothioate group is a phosphorothioate monoester group or a phosphorothioate diester group. In some embodiments, the phosphorothioate group is a phosphorothioate diester group.
在一些实施方案中,为了促进siRNA进入细胞,可以在siRNA有义链的末端引入胆固醇等亲脂性的基团,亲脂性的基团包括以共价键与小干扰核酸结合,如末端引入胆固醇、脂蛋白、维生素E等,以利于通过由脂质双分子层构成的细胞膜与细胞内的mRNA发生作用。同时,siRNA也可以进行非共价键修饰,如通过疏水键或离子键结合磷脂分子、多肽、阳离子聚合物等增加稳定性和生物学活性。In some embodiments, in order to promote the entry of siRNA into cells, a lipophilic group such as cholesterol can be introduced at the end of the sense strand of the siRNA. The lipophilic group includes binding with a small interfering nucleic acid with a covalent bond, such as introducing cholesterol, Lipoproteins, vitamin E, etc., in order to facilitate the interaction with intracellular mRNA through the cell membrane composed of lipid bilayers. At the same time, siRNA can also be modified by non-covalent bonds, such as binding phospholipid molecules, polypeptides, and cationic polymers through hydrophobic bonds or ionic bonds to increase stability and biological activity.
在一些实施方案中,包含式(I)所示的化学修饰、其互变异构体或其药学上可接受的盐的核苷酸位于反义链5’端的第5位、第6位或第7位。In some embodiments, the nucleotide comprising the chemical modification represented by formula (I), its tautomer or a pharmaceutically acceptable salt thereof is located at the 5th, 6th, or 5th position of the 5' end of the antisense strand No. 7.
在一些实施方案中,包含式(I)所示的化学修饰、其互变异构体或其药学上可接受的盐的核苷酸位于反义链5’端的位于第7位。In some embodiments, the nucleotide comprising the chemical modification represented by formula (I), its tautomer or a pharmaceutically acceptable salt thereof is located at position 7 at the 5' end of the antisense strand.
在一些实施方案中,式(I)所示的化学修饰、其互变异构体或其药学上可接受的盐修饰在其5’端的第5位时,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, when the chemical modification represented by formula (I), its tautomer or its pharmaceutically acceptable salt is modified at the 5th position of its 5' end, B is selected from adenine, guanine, 2,6-Diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,式(I)所示的化学修饰、其互变异构体或其药学上可接受的盐修饰在其5’端的第6位时,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, when the chemical modification represented by formula (I), its tautomer or its pharmaceutically acceptable salt is modified at the 6th position of its 5' end, B is selected from adenine, guanine, 2,6-Diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,式(I)所示的化学修饰、其互变异构体或其药学上可接受的盐修饰在其5’端的第7位时,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, when the chemical modification represented by formula (I), its tautomer or its pharmaceutically acceptable salt is modified at the 7th position of its 5' end, B is selected from adenine, guanine, 2,6-Diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,式(I)所示的化学修饰、其互变异构体或其药学上可接受的盐修饰在其5’端的第8位时,B选自腺嘌呤、鸟嘌呤、2,6-二氨基嘌呤、6-二甲基氨基嘌呤、2-氨基嘌呤、胞嘧啶、尿嘧啶、胸腺嘧啶、吲哚、5-硝基吲哚和3-硝基吡咯。In some embodiments, when the chemical modification represented by formula (I), its tautomer or its pharmaceutically acceptable salt is modified at the 8th position of its 5' end, B is selected from adenine, guanine, 2,6-Diaminopurine, 6-dimethylaminopurine, 2-aminopurine, cytosine, uracil, thymine, indole, 5-nitroindole, and 3-nitropyrrole.
在一些实施方案中,B与所述反义链在其5’端的第5位核苷酸未被修饰时的碱基相同。In some embodiments, B is the same as the base when the 5th nucleotide at the 5' end of the antisense strand is unmodified.
在一些实施方案中,B与所述反义链在其5’端的第6位核苷酸未被修饰时的碱基相同。In some embodiments, B is the same as the base when the 6th nucleotide at the 5' end of the antisense strand is unmodified.
在一些实施方案中,B与所述反义链在其5’端的第7位核苷酸未被修饰时的碱基相同。In some embodiments, B is the same as the base when the 7th nucleotide at the 5' end of the antisense strand is unmodified.
在一些实施方案中,B与所述反义链在其5’端的第8位核苷酸未被修饰时的碱基相同。In some embodiments, B is the same as the base when the 8th nucleotide at the 5' end of the antisense strand is unmodified.
一些实施方案中,所述的有义链和/或反义链中至少一个另外的核苷酸为修饰的核苷酸,所述修饰的核苷酸选自:2'-甲氧基修饰的核苷酸、2'-经取代的烷氧基修饰的核苷酸、2'-烷基修饰的核苷酸、2'-经取代的烷基修饰的核苷酸、2'-氨基修饰的核苷酸、2'-经取代的氨基修饰的核苷酸、2'-氟代修饰的核苷酸、2'-脱氧核苷酸、2'-脱氧-2'-氟代修饰的核苷酸、3'-脱氧-胸腺嘧啶核苷酸、异核苷酸、LNA、ENA、cET、UNA、GNA;一些实施方案中,修饰的核苷酸相互独立地选自:2'-甲氧基修饰的核苷酸或2'-氟代修饰的核苷酸。In some embodiments, at least one additional nucleotide in the sense strand and/or antisense strand is a modified nucleotide selected from the group consisting of: 2'-methoxy modified Nucleotides, 2'-substituted alkoxy-modified nucleotides, 2'-alkyl-modified nucleotides, 2'-substituted alkyl-modified nucleotides, 2'-amino-modified Nucleotides, 2'-substituted amino-modified nucleotides, 2'-fluoro-modified nucleotides, 2'-deoxynucleotides, 2'-deoxy-2'-fluoro-modified nucleosides acid, 3'-deoxy-thymidine nucleotides, isonucleotides, LNA, ENA, cET, UNA, GNA; in some embodiments, the modified nucleotides are independently selected from: 2'-methoxy Modified nucleotides or 2'-fluoro modified nucleotides.
在一些实施方案中,所述的有义链含有连续三个具有相同修饰的核苷酸。在一些实施方案中,所述的三个具有相同修饰的核苷酸为2'-氟代修饰的核苷酸。In some embodiments, the sense strand contains three consecutive nucleotides with the same modification. In some embodiments, the three nucleotides with the same modification are 2'-fluoro-modified nucleotides.
在一些实施方案中,按照5'端到3'端的方向,所述反义链的第2、4、6、10、12、14、16和18位的核苷酸各自独立地为2'-氟代修饰的核苷酸。In some embodiments, the nucleotides at positions 2, 4, 6, 10, 12, 14, 16 and 18 of the antisense strand are each independently 2'- Fluoro-modified nucleotides.
在一些实施方案中,所述反义链与靶序列至少部分地反向互补以介导RNA干 扰;在一些实施方案中,所述反义链与靶序列之间存在不多于5个、不多于4个、不多于3个、不多于2个、不多于1个错配;在一些实施方案中,所述反义链与靶序列完全反向互补。In some embodiments, the antisense strand is at least partially reverse complementary to the target sequence to mediate RNA interference; in some embodiments, there are no more than 5, no More than 4, no more than 3, no more than 2, no more than 1 mismatch; in some embodiments, the antisense strand is fully reverse complementary to the target sequence.
在一些实施方案中,所述有义链与反义链至少部分地反向互补以形成双链区;在一些实施方案中,所述有义链与反义链之间存在不多于5个、不多于4个、不多于3个、不多于2个、不多于1个错配;在一些实施方案中,所述有义链与反义链完全反向互补。In some embodiments, the sense strand and the antisense strand are at least partially reverse complementary to form a double-stranded region; in some embodiments, there are no more than 5 , no more than 4, no more than 3, no more than 2, no more than 1 mismatch; in some embodiments, the sense strand is fully reverse complementary to the antisense strand.
在一些实施方案中,所述有义链和反义链各自独立地具有16至35个、16至34个、17至34个、17至33个、18至33个、18至32个、18至31个、18至30个、18至29个、18至28个、18至27个、18至26个、18至25个、18至24个、18至23个、19至25个、19至24个、或19至23个核苷酸(例如19、20、21、22、23个核苷酸)。In some embodiments, the sense and antisense strands each independently have 16 to 35, 16 to 34, 17 to 34, 17 to 33, 18 to 33, 18 to 32, 18 to 31, 18 to 30, 18 to 29, 18 to 28, 18 to 27, 18 to 26, 18 to 25, 18 to 24, 18 to 23, 19 to 25, 19 to 24, or 19 to 23 nucleotides (eg, 19, 20, 21, 22, 23 nucleotides).
在一些实施方案中,所述有义链和反义链长度相同或不同,所述有义链的长度为19-23个核苷酸,所述反义链的长度为19-26个核苷酸。这样,本公开提供的dsRNA中的有义链和反义链的长度比可以是19/20、19/21、19/22、19/23、19/24、19/25、19/26、20/20、20/21、20/22、20/23、20/24、20/25、20/26、21/20、21/21、21/22、21/23、21/24、21/25、21/26、22/20、22/21、22/22、22/23、22/24、22/25、22/26、23/20、23/21、23/22、23/23、23/24、23/25或23/26。在一些实施方案中,所述有义链和反义链的长度比为19/21、21/23或23/25。在一些实施方案中,所述有义链和反义链的长度比为19/21。In some embodiments, the sense strand and the antisense strand are the same or different in length, the sense strand is 19-23 nucleotides in length, and the antisense strand is 19-26 nucleotides in length acid. In this way, the length ratio of the sense strand and the antisense strand in the dsRNA provided by the present disclosure can be 19/20, 19/21, 19/22, 19/23, 19/24, 19/25, 19/26, 20 /20, 20/21, 20/22, 20/23, 20/24, 20/25, 20/26, 21/20, 21/21, 21/22, 21/23, 21/24, 21/25 , 21/26, 22/20, 22/21, 22/22, 22/23, 22/24, 22/25, 22/26, 23/20, 23/21, 23/22, 23/23, 23 /24, 23/25 or 23/26. In some embodiments, the sense and antisense strands have a length ratio of 19/21, 21/23, or 23/25. In some embodiments, the sense strand and antisense strand have a length ratio of 19/21.
在一些实施方案中,所述siRNA包含一个或两个平端。In some embodiments, the siRNA comprises one or two blunt ends.
在一些实施方案中,所述siRNA包含具有1至4个未配对核苷酸的突出端,例如1个、2个、3个、4个。In some embodiments, the siRNA comprises an overhang with 1 to 4 unpaired nucleotides, eg, 1, 2, 3, 4.
在一些实施方案中,所述siRNA包含位于所述反义链3’端的突出端。In some embodiments, the siRNA comprises an overhang located 3' to the antisense strand.
在一些实施方案中,所述有义链含有或选自如下式所示的核苷酸序列(5’-3’):In some embodiments, the sense strand comprises or is selected from a nucleotide sequence (5'-3') represented by the following formula:
N
aN
aN
aN
aXN
aN
bN
bN
bN
aN
aN
aN
aN
aN
aN
aN
aN
aN
a
N a N a N a N a XN a N b N b N b N a N a N a N a N a N a N a N a N a N a
其中,每个X独立地为N
a或N
b;N
a为2'-甲氧基修饰的核苷酸,N
b为2'-氟代修饰的核苷酸。
Wherein, each X is independently Na or N b ; Na is a 2'-methoxy-modified nucleotide, and N b is a 2'-fluoro-modified nucleotide.
在一些实施方案中,所述有义链含有或选自如下式所示的核苷酸序列(5’-3’):In some embodiments, the sense strand comprises or is selected from a nucleotide sequence (5'-3') represented by the following formula:
5’-N
aN
aN
aN
aN
aN
aN
bN
bN
bN
aN
aN
aN
aN
aN
aN
aN
aN
aN
a-3’;或,
5'-N a N a N a N a N a N a N b N b N b N a N a N a N a N a N a N a N a N a N a -3'; or,
5’-N
aN
aN
aN
aN
bN
aN
bN
bN
bN
aN
aN
aN
aN
aN
aN
aN
aN
aN
a-3’;
5'-N a N a N a N a N b N a N b N b N b N a N a N a N a N a N a N a N a N a N a -3 ' ;
其中,N
a为2'-甲氧基修饰的核苷酸,N
b为2'-氟代修饰的核苷酸。
Wherein, N a is a 2'-methoxy-modified nucleotide, and N b is a 2'-fluoro-modified nucleotide.
在一些实施方案中,所述反义链含有或选自如下式所示的核苷酸序列(5’-3’):In some embodiments, the antisense strand contains or is selected from a nucleotide sequence (5'-3') as shown in the following formula:
5’-N
a’N
b’N
a’N
b’N
a’N
b’W’N
a’N
a’N
b’N
a’N
b’N
a’N
b’N
a’N
b’N
a’N
b’N
a’N
a’N
a’-3’;
5'-N a 'N b 'N a 'N b ' N a 'N b 'W'N a 'N a 'N b 'N a 'N b 'N a 'N b 'N a 'N b ' N a'N b'N a'N a'N a' -3';
其中,N
a’为2'-甲氧基修饰的核苷酸,N
b’为2'-氟代修饰的核苷酸;W’表示包含式(I)所示的化学修饰、其互变异构体或其药学上可接受的盐修饰的核苷酸。
Among them, N a 'is a 2'-methoxy-modified nucleotide, N b ' is a 2'-fluoro-modified nucleotide; W' means that it contains the chemical modification shown in formula (I), its interconversion Isomer-modified nucleotides or pharmaceutically acceptable salts thereof.
在一些具体的实施方案中,W’表示包含式(I)所示的化学修饰、其互变异构体或其药学上可接受的盐的核苷酸。In some specific embodiments, W' represents a nucleotide comprising a chemical modification represented by formula (I), a tautomer or a pharmaceutically acceptable salt thereof.
在一些具体的实施方案中,式(I)所示的化学修饰选自:In some specific embodiments, the chemical modification shown in formula (I) is selected from:
其中:B选自鸟嘌呤、腺嘌呤、胞嘧啶和尿嘧啶;在一些具体的实施方案中,B与所述反义链在其5’端的第7位核苷酸未被修饰时的碱基相同。
Wherein: B is selected from guanine, adenine, cytosine and uracil; in some specific embodiments, the base between B and the 7th nucleotide at the 5' end of the antisense strand is not modified same.
在一些具体的实施方案中,式(I)所示的化学修饰选自:In some specific embodiments, the chemical modification shown in formula (I) is selected from:
其中:M为O或S;其中:B选自鸟嘌呤、腺嘌呤、胞嘧啶或尿嘧啶;在一些具体的实施方案中,B与所述反义链在其5’端的第7位核苷酸未被修饰时的碱基相同。
Wherein: M is O or S; Wherein: B is selected from guanine, adenine, cytosine or uracil; The acid is the same as the base when it is not modified.
在一些具体的实施方案中,M为S。一些具体的实施方案中,M为O。In some specific embodiments, M is S. In some specific embodiments, M is O.
在一些实施方案中,所述有义链和/或反义链中至少一个磷酸酯基为具有修饰基团的磷酸酯基,所述修饰基团使得所述siRNA在生物样品或环境中具有增加的稳定性;在一些实施方案中,所述具有修饰基团的磷酸酯基为硫代磷酸酯基。在一些实施方案中,所述具有修饰基团的磷酸酯基为硫代磷酸二酯基。In some embodiments, at least one phosphate group in the sense strand and/or the antisense strand is a phosphate group with a modification group that allows the siRNA to have an increased stability; in some embodiments, the phosphate group having a modifying group is a phosphorothioate group. In some embodiments, the phosphate group with a modifying group is a phosphorothioate group.
在一些实施方案中,所述硫代磷酸二酯基存在于以下位置中的至少一处:In some embodiments, the phosphorothioate group is present in at least one of the following positions:
所述有义链的5'端第1个核苷酸和第2个核苷酸之间;Between the first nucleotide and the second nucleotide at the 5' end of the sense strand;
所述有义链的5'端第2个核苷酸和第3个核苷酸之间;Between the 2nd nucleotide and the 3rd nucleotide of the 5' end of the sense strand;
所述反义链的5'端第1个核苷酸和第2个核苷酸之间;Between the first nucleotide and the second nucleotide at the 5' end of the antisense strand;
所述反义链的5'端第2个核苷酸和第3个核苷酸之间;Between the 2nd nucleotide and the 3rd nucleotide of the 5' end of the antisense strand;
所述反义链的3'端第1个核苷酸和第2个核苷酸之间;以及Between the first nucleotide and the second nucleotide of the 3' end of the antisense strand; and
所述反义链的3'端第2个核苷酸和第3个核苷酸之间。Between the second nucleotide and the third nucleotide at the 3' end of the antisense strand.
在一些实施方案中,所述有义链和/或反义链中包括多个硫代磷酸二酯基,所述硫代磷酸二酯基存在于:In some embodiments, the sense strand and/or antisense strand include multiple phosphorothioate groups present in:
所述有义链的5'端第1个核苷酸和第2个核苷酸之间;和,Between the 1st nucleotide and the 2nd nucleotide of the 5' end of the sense strand; and,
所述有义链的5'端第2个核苷酸和第3个核苷酸之间;和,Between the 2nd and 3rd nucleotides of the 5' end of the sense strand; and,
所述反义链的5'端第1个核苷酸和第2个核苷酸之间;和,Between the first nucleotide and the second nucleotide of the 5' end of the antisense strand; and,
所述反义链的5'端第2个核苷酸和第3个核苷酸之间;和,between the 2nd and 3rd nucleotides of the 5' end of the antisense strand; and,
所述反义链的3'端第1个核苷酸和第2个核苷酸之间;和,Between the first nucleotide and the second nucleotide of the 3' end of the antisense strand; and,
所述反义链的3'端第2个核苷酸和第3个核苷酸之间。Between the second nucleotide and the third nucleotide at the 3' end of the antisense strand.
在一些实施方案中,所述有义链包含如下式所示的核苷酸序列:In some embodiments, the sense strand comprises a nucleotide sequence represented by the following formula:
5’-NmsNmsNmNmNfNmNfNfNfNmNmNmNmNmNmNmNmNmNm-3’,或,5'-NmsNmsNmNmNmNfNmNfNfNfNmNmNmNmNmNmNmNmNmNmNmNm-3', or,
5’-NmsNmsNmNmNmNmNfNfNfNmNmNmNmNmNmNmNmNmNm-3’,5'-NmsNmsNmNmNmNmNmNfNfNfNmNmNmNmNmNmNmNmNmNmNmNm-3',
其中,Nm表示2'-甲氧基修饰的任意核苷酸,例如2'-甲氧基修饰的C、G、U、A;Nf表示2'-氟代修饰的任意核苷酸,例如2'-氟代修饰的C、G、U、A;Wherein, Nm represents any nucleotide modified by 2'-methoxy, such as C, G, U, A modified by 2'-methoxy; Nf represents any nucleotide modified by 2'-fluoro, such as 2 '- Fluoro-modified C, G, U, A;
小写字母s与该字母s左右相邻的两个核苷酸之间为硫代磷酸二酯基连接。The connection between the lowercase letter s and the two nucleotides adjacent to the left and right of the letter s is a phosphorothioate group.
在一些实施方案中,所述反义链包含如下式所示的核苷酸序列:In some embodiments, the antisense strand comprises a nucleotide sequence represented by the following formula:
5’-Nm’sNf’sNm’Nf’Nm’Nf’W’Nm’Nm’Nf’Nm’Nf’Nm’Nf’Nm’Nf’Nm’Nf’Nm’sNm’sNm’-3’;5'-Nm'sNf'sNm'Nf'Nm'Nf'W'Nm'Nm'Nf'Nm'Nf'Nm'Nf'Nm'Nf'Nm'Nf'Nm'sNm'sNm'-3';
其中,Nm’表示2'-甲氧基修饰的任意核苷酸,例如2'-甲氧基修饰的C、G、U、A;Nf’表示2'-氟代修饰的任意核苷酸,例如2'-氟代修饰的C、G、U、A;Wherein, Nm' represents any nucleotide modified by 2'-methoxy group, such as C, G, U, A modified by 2'-methoxy group; Nf' represents any nucleotide modified by 2'-fluoro group, For example, 2'-fluoro modified C, G, U, A;
小写字母s在中间时表示与该字母s左右相邻的两个核苷酸之间为硫代磷酸二酯基连接;When the lowercase letter s is in the middle, it means that the two nucleotides adjacent to the left and right of the letter s are connected by phosphorothioate groups;
W’表示包含式(I)所示的化学修饰、其互变异构体或其药学上可接受的盐修饰的核苷酸。W' represents a modified nucleotide comprising a chemical modification represented by formula (I), its tautomer or a pharmaceutically acceptable salt thereof.
在一些实施方案中,式(I)所示的化学修饰选自:In some embodiments, the chemical modification represented by formula (I) is selected from:
其中:B选自鸟嘌呤、腺嘌呤、胞嘧啶和尿嘧啶;在一些实施方案中,B与所述反义链在其5’端的第7位核苷酸未被修饰时的碱基相同。Wherein: B is selected from guanine, adenine, cytosine and uracil; in some embodiments, B is the same as the base when the 7th nucleotide at the 5' end of the antisense strand is not modified.
一些实施方案中,式(I)所示的化学修饰选自:In some embodiments, the chemical modification shown in formula (I) is selected from:
其中:M为O或S;其中:B选自鸟嘌呤、腺嘌呤、胞嘧啶或尿嘧啶;在一些具体的实施方案中,B与所述反义链在其5’端的第7位核苷酸未被修饰时的碱基相同。Wherein: M is O or S; Wherein: B is selected from guanine, adenine, cytosine or uracil; The acid is the same as the base when it is not modified.
在一些实施方案中,M为S。在一些具体的实施方案中,M为O。In some embodiments, M is S. In some specific embodiments, M is O.
在一些实施方案中,所述siRNA为靶向第13型17β-羟基类固醇脱氢酶(HSD17B13)基因的siRNA。In some embodiments, the siRNA is an siRNA targeting the 17β-hydroxysteroid dehydrogenase type 13 (HSD17B13) gene.
在一些实施方案中,所述siRNA的有义链的核苷酸序列包含与SEQ ID NO:1 至SEQ ID NO:8中任一的核苷酸序列相差不超过3个核苷酸的至少15个连续核苷酸,和/或,In some embodiments, the nucleotide sequence of the sense strand of the siRNA comprises at least 15 nucleotide sequences that differ by no more than 3 nucleotides from any of the nucleotide sequences of SEQ ID NO: 1 to SEQ ID NO: 8. consecutive nucleotides, and/or,
反义链的核苷酸序列包含与SEQ ID NO:9至SEQ ID NO:12中任一的核苷酸序列相差不超过3个核苷酸的至少19个连续核苷酸。The nucleotide sequence of the antisense strand comprises at least 19 consecutive nucleotides differing by no more than 3 nucleotides from the nucleotide sequence of any one of SEQ ID NO: 9 to SEQ ID NO: 12.
在一些实施方案中,所述siRNA的有义链的核苷酸序列包含SEQ ID NO:1至SEQ ID NO:8中的任一项核苷酸序列,和/或,反义链的核苷酸序列包含SEQ ID NO:9至SEQ ID NO:12中的任一项核苷酸序列;In some embodiments, the nucleotide sequence of the sense strand of the siRNA comprises any one of the nucleotide sequences of SEQ ID NO:1 to SEQ ID NO:8, and/or, the nucleosides of the antisense strand The acid sequence comprises any one nucleotide sequence in SEQ ID NO:9 to SEQ ID NO:12;
在一些实施方案中,所述siRNA的核苷酸序列为以下任一组方案:In some embodiments, the nucleotide sequence of the siRNA is any one of the following schemes:
有义链的核苷酸序列包含SEQ ID NO:8的核苷酸序列,反义链的核苷酸序列包含SEQ ID NO:12的核苷酸序列;The nucleotide sequence of the sense strand comprises the nucleotide sequence of SEQ ID NO:8, and the nucleotide sequence of the antisense strand comprises the nucleotide sequence of SEQ ID NO:12;
有义链的核苷酸序列包含SEQ ID NO:6的核苷酸序列,反义链的核苷酸序列包含SEQ ID NO:11的核苷酸序列;The nucleotide sequence of the sense strand comprises the nucleotide sequence of SEQ ID NO:6, and the nucleotide sequence of the antisense strand comprises the nucleotide sequence of SEQ ID NO:11;
有义链的核苷酸序列包含SEQ ID NO:2的核苷酸序列,反义链的核苷酸序列包含SEQ ID NO:9的核苷酸序列;The nucleotide sequence of the sense strand comprises the nucleotide sequence of SEQ ID NO:2, and the nucleotide sequence of the antisense strand comprises the nucleotide sequence of SEQ ID NO:9;
有义链的核苷酸序列包含SEQ ID NO:4的核苷酸序列,反义链的核苷酸序列包含SEQ ID NO:10的核苷酸序列;The nucleotide sequence of the sense strand comprises the nucleotide sequence of SEQ ID NO:4, and the nucleotide sequence of the antisense strand comprises the nucleotide sequence of SEQ ID NO:10;
有义链的核苷酸序列包含SEQ ID NO:7的核苷酸序列,反义链的核苷酸序列包含SEQ ID NO:12的核苷酸序列;The nucleotide sequence of the sense strand comprises the nucleotide sequence of SEQ ID NO:7, and the nucleotide sequence of the antisense strand comprises the nucleotide sequence of SEQ ID NO:12;
有义链的核苷酸序列包含SEQ ID NO:5的核苷酸序列,反义链的核苷酸序列包含SEQ ID NO:11的核苷酸序列;The nucleotide sequence of the sense strand comprises the nucleotide sequence of SEQ ID NO:5, and the nucleotide sequence of the antisense strand comprises the nucleotide sequence of SEQ ID NO:11;
有义链的核苷酸序列包含SEQ ID NO:1的核苷酸序列,反义链的核苷酸序列包含SEQ ID NO:9的核苷酸序列;和The nucleotide sequence of the sense strand comprises the nucleotide sequence of SEQ ID NO:1, and the nucleotide sequence of the antisense strand comprises the nucleotide sequence of SEQ ID NO:9; and
有义链的核苷酸序列包含SEQ ID NO:3的核苷酸序列,反义链的核苷酸序列包含SEQ ID NO:10的核苷酸序列。The nucleotide sequence of the sense strand comprises the nucleotide sequence of SEQ ID NO:3, and the nucleotide sequence of the antisense strand comprises the nucleotide sequence of SEQ ID NO:10.
在一些实施方案中,所述siRNA为以下任一方案:In some embodiments, the siRNA is any of the following:
有义链的核苷酸序列为SEQ ID NO:8,反义链的核苷酸序列为SEQ ID NO:12;The nucleotide sequence of the sense strand is SEQ ID NO:8, and the nucleotide sequence of the antisense strand is SEQ ID NO:12;
有义链的核苷酸序列为SEQ ID NO:6,反义链的核苷酸序列为SEQ ID NO:11;The nucleotide sequence of the sense strand is SEQ ID NO:6, and the nucleotide sequence of the antisense strand is SEQ ID NO:11;
有义链的核苷酸序列为SEQ ID NO:2,反义链的核苷酸序列为SEQ ID NO:9;The nucleotide sequence of the sense strand is SEQ ID NO:2, and the nucleotide sequence of the antisense strand is SEQ ID NO:9;
有义链的核苷酸序列为SEQ ID NO:4,反义链的核苷酸序列为SEQ ID NO:10;The nucleotide sequence of the sense strand is SEQ ID NO:4, and the nucleotide sequence of the antisense strand is SEQ ID NO:10;
有义链的核苷酸序列为SEQ ID NO:7,反义链的核苷酸序列为SEQ ID NO:12;The nucleotide sequence of the sense strand is SEQ ID NO:7, and the nucleotide sequence of the antisense strand is SEQ ID NO:12;
有义链的核苷酸序列为SEQ ID NO:5,反义链的核苷酸序列为SEQ ID NO:11;The nucleotide sequence of the sense strand is SEQ ID NO:5, and the nucleotide sequence of the antisense strand is SEQ ID NO:11;
有义链的核苷酸序列为SEQ ID NO:1,反义链的核苷酸序列为SEQ ID NO:9;或者The nucleotide sequence of the sense strand is SEQ ID NO: 1, and the nucleotide sequence of the antisense strand is SEQ ID NO: 9; or
有义链的核苷酸序列为SEQ ID NO:3,反义链的核苷酸序列为SEQ ID NO:10。The nucleotide sequence of the sense strand is SEQ ID NO:3, and the nucleotide sequence of the antisense strand is SEQ ID NO:10.
在一些实施方案中,所述dsRNA的有义链包含SEQ ID NO:13至SEQ ID NO:20中的任一项所示的核苷酸序列,和/或,反义链包含SEQ ID NO:21至SEQ ID NO:24中的任一项所示的核苷酸序列。In some embodiments, the sense strand of the dsRNA comprises the nucleotide sequence shown in any one of SEQ ID NO:13 to SEQ ID NO:20, and/or, the antisense strand comprises SEQ ID NO: 21 to the nucleotide sequence shown in any one of SEQ ID NO:24.
在一些实施方案中,所述dsRNA为以下任一方案:其中In some embodiments, the dsRNA is any of the following: wherein
有义链包含SEQ ID NO:20所示的核苷酸序列,反义链包含SEQ ID NO:24所示的核苷酸序列;The sense strand comprises the nucleotide sequence shown in SEQ ID NO:20, and the antisense strand comprises the nucleotide sequence shown in SEQ ID NO:24;
有义链包含SEQ ID NO:18所示的核苷酸序列,反义链包含SEQ ID NO:23所示的核苷酸序列;The sense strand comprises the nucleotide sequence shown in SEQ ID NO:18, and the antisense strand comprises the nucleotide sequence shown in SEQ ID NO:23;
有义链包含SEQ ID NO:14所示的核苷酸序列,反义链包含SEQ ID NO:21所示的核苷酸序列;The sense strand comprises the nucleotide sequence shown in SEQ ID NO:14, and the antisense strand comprises the nucleotide sequence shown in SEQ ID NO:21;
有义链包含SEQ ID NO:16所示的核苷酸序列,反义链包含SEQ ID NO:22所示的核苷酸序列;The sense strand comprises the nucleotide sequence shown in SEQ ID NO:16, and the antisense strand comprises the nucleotide sequence shown in SEQ ID NO:22;
有义链包含SEQ ID NO:19所示的核苷酸序列,反义链包含SEQ ID NO:24所示的核苷酸序列;The sense strand comprises the nucleotide sequence shown in SEQ ID NO:19, and the antisense strand comprises the nucleotide sequence shown in SEQ ID NO:24;
有义链包含SEQ ID NO:17所示的核苷酸序列,反义链包含SEQ ID NO:23所示的核苷酸序列;The sense strand comprises the nucleotide sequence shown in SEQ ID NO:17, and the antisense strand comprises the nucleotide sequence shown in SEQ ID NO:23;
有义链包含SEQ ID NO:13所示的核苷酸序列,反义链包含SEQ ID NO:21所示的核苷酸序列;The sense strand comprises the nucleotide sequence shown in SEQ ID NO:13, and the antisense strand comprises the nucleotide sequence shown in SEQ ID NO:21;
有义链包含SEQ ID NO:15所示的核苷酸序列,反义链包含SEQ ID NO:22所示的核苷酸序列。The sense strand comprises the nucleotide sequence shown in SEQ ID NO:15, and the antisense strand comprises the nucleotide sequence shown in SEQ ID NO:22.
在一些实施方案中,所述dsRNA为以下任一方案:In some embodiments, the dsRNA is any of the following:
有义链为SEQ ID NO:20所示的核苷酸序列,反义链为SEQ ID NO:24所示的核苷酸序列;The sense strand is the nucleotide sequence shown in SEQ ID NO:20, and the antisense strand is the nucleotide sequence shown in SEQ ID NO:24;
有义链为SEQ ID NO:18所示的核苷酸序列,反义链为SEQ ID NO:23所示的核苷酸序列;The sense strand is the nucleotide sequence shown in SEQ ID NO:18, and the antisense strand is the nucleotide sequence shown in SEQ ID NO:23;
有义链为SEQ ID NO:14所示的核苷酸序列,反义链为SEQ ID NO:21所示的核苷酸序列;The sense strand is the nucleotide sequence shown in SEQ ID NO:14, and the antisense strand is the nucleotide sequence shown in SEQ ID NO:21;
有义链为SEQ ID NO:16所示的核苷酸序列,反义链为SEQ ID NO:22所示的核苷酸序列;The sense strand is the nucleotide sequence shown in SEQ ID NO:16, and the antisense strand is the nucleotide sequence shown in SEQ ID NO:22;
有义链为SEQ ID NO:19所示的核苷酸序列,反义链为SEQ ID NO:24所示的核苷酸序列;The sense strand is the nucleotide sequence shown in SEQ ID NO:19, and the antisense strand is the nucleotide sequence shown in SEQ ID NO:24;
有义链为SEQ ID NO:17所示的核苷酸序列,反义链为SEQ ID NO:23所示的核苷酸序列;The sense strand is the nucleotide sequence shown in SEQ ID NO:17, and the antisense strand is the nucleotide sequence shown in SEQ ID NO:23;
有义链为SEQ ID NO:13所示的核苷酸序列,反义链为SEQ ID NO:21所示的核苷酸序列;The sense strand is the nucleotide sequence shown in SEQ ID NO:13, and the antisense strand is the nucleotide sequence shown in SEQ ID NO:21;
有义链为SEQ ID NO:15所示的核苷酸序列,反义链为SEQ ID NO:22所示的核苷酸序列。The sense strand is the nucleotide sequence shown in SEQ ID NO:15, and the antisense strand is the nucleotide sequence shown in SEQ ID NO:22.
在一些实施方案中,所述dsRNA的有义链包含SEQ ID NO:13至SEQ ID NO:20中的任一项,和/或,反义链包含SEQ ID NO:21至SEQ ID NO:24中的任一项;In some embodiments, the sense strand of the dsRNA comprises any one of SEQ ID NO: 13 to SEQ ID NO: 20, and/or, the antisense strand comprises SEQ ID NO: 21 to SEQ ID NO: 24 any of
在一些实施方案中,所述dsRNA为以下任一方案:其中In some embodiments, the dsRNA is any of the following: wherein
有义链包含SEQ ID NO:20,反义链包含SEQ ID NO:24;The sense strand comprises SEQ ID NO:20, and the antisense strand comprises SEQ ID NO:24;
有义链包含SEQ ID NO:18,反义链包含SEQ ID NO:23;The sense strand comprises SEQ ID NO:18, and the antisense strand comprises SEQ ID NO:23;
有义链包含SEQ ID NO:14,反义链包含SEQ ID NO:21;The sense strand comprises SEQ ID NO:14, and the antisense strand comprises SEQ ID NO:21;
有义链包含SEQ ID NO:16,反义链包含SEQ ID NO:22;The sense strand comprises SEQ ID NO:16, and the antisense strand comprises SEQ ID NO:22;
有义链包含SEQ ID NO:19,反义链包含SEQ ID NO:24;The sense strand comprises SEQ ID NO:19, and the antisense strand comprises SEQ ID NO:24;
有义链包含SEQ ID NO:17,反义链包含SEQ ID NO:23;The sense strand comprises SEQ ID NO:17, and the antisense strand comprises SEQ ID NO:23;
有义链包含SEQ ID NO:13,反义链包含SEQ ID NO:21;The sense strand comprises SEQ ID NO:13, and the antisense strand comprises SEQ ID NO:21;
有义链包含SEQ ID NO:15,反义链包含SEQ ID NO:22。The sense strand comprises SEQ ID NO:15 and the antisense strand comprises SEQ ID NO:22.
在一些实施方案中,所述dsRNA为以下任一方案:In some embodiments, the dsRNA is any of the following:
有义链选自SEQ ID NO:20,反义链选自SEQ ID NO:24;The sense strand is selected from SEQ ID NO:20, and the antisense strand is selected from SEQ ID NO:24;
有义链选自SEQ ID NO:18,反义链选自SEQ ID NO:23;The sense strand is selected from SEQ ID NO:18, and the antisense strand is selected from SEQ ID NO:23;
有义链选自SEQ ID NO:14,反义链选自SEQ ID NO:21;The sense strand is selected from SEQ ID NO:14, and the antisense strand is selected from SEQ ID NO:21;
有义链选自SEQ ID NO:16,反义链选自SEQ ID NO:22;The sense strand is selected from SEQ ID NO:16, and the antisense strand is selected from SEQ ID NO:22;
有义链选自SEQ ID NO:19,反义链选自SEQ ID NO:24;The sense strand is selected from SEQ ID NO:19, and the antisense strand is selected from SEQ ID NO:24;
有义链选自SEQ ID NO:17,反义链选自SEQ ID NO:23;The sense strand is selected from SEQ ID NO:17, and the antisense strand is selected from SEQ ID NO:23;
有义链选自SEQ ID NO:13,反义链选自SEQ ID NO:21;The sense strand is selected from SEQ ID NO:13, and the antisense strand is selected from SEQ ID NO:21;
有义链选自SEQ ID NO:15,反义链选自SEQ ID NO:22。The sense strand is selected from SEQ ID NO:15 and the antisense strand is selected from SEQ ID NO:22.
在一些实施方案中,所述dsRNA为以下任一方案:In some embodiments, the dsRNA is any of the following:
包含或是SEQ ID NO:20和SEQ ID NO:24;Comprising or SEQ ID NO:20 and SEQ ID NO:24;
包含或是SEQ ID NO:18和SEQ ID NO:23;Comprising or SEQ ID NO: 18 and SEQ ID NO: 23;
包含或是SEQ ID NO:14和SEQ ID NO:21;Comprising or SEQ ID NO:14 and SEQ ID NO:21;
包含或是SEQ ID NO:16和SEQ ID NO:22;Comprising or SEQ ID NO:16 and SEQ ID NO:22;
包含或是SEQ ID NO:19和SEQ ID NO:24;Comprising or SEQ ID NO:19 and SEQ ID NO:24;
包含或是SEQ ID NO:17和SEQ ID NO:23;Comprising or SEQ ID NO:17 and SEQ ID NO:23;
包含或是SEQ ID NO:13和SEQ ID NO:21;Comprising or SEQ ID NO:13 and SEQ ID NO:21;
包含或是SEQ ID NO:15和SEQ ID NO:22。Comprising or SEQ ID NO:15 and SEQ ID NO:22.
本公开中,按照5’-3’方向,In the present disclosure, according to the 5'-3' direction,
SEQ ID NO:13是SEQ ID NO: 13 is
CmsAmsCmCmAfAmGfGfAfUmGmAmAmGmAmGmAmUmUm-NAG0052’;CmsAmsCmCmAfAmGfGfAfUmGmAmAmGmAmGmAmUmUm-NAG0052';
SEQ ID NO:14是SEQ ID NO: 14 is
CmsAmsCmCmAmAmGfGfAfUmGmAmAmGmAmGmAmUmUm-NAG0052’;CmsAmsCmCmAmAmGfGfAfUmGmAmAmGmAmGmAmUmUm-NAG0052';
SEQ ID NO:15是SEQ ID NO:15 is
CmsCmsAmAmGfGmAfUfGfAmAmGmAmGmAmUmUmAmUm-NAG0052’;CmsCmsAmAmGfGmAfUfGfAmAmGmAmGmAmUmUmAmUm-NAG0052';
SEQ ID NO:16是SEQ ID NO: 16 is
CmsCmsAmAmGmGmAfUfGfAmAmGmAmGmAmUmUmAmUm-NAG0052’;CmsCmsAmAmGmGmGmAfUfGfAmAmGmAmGmAmUmUmAmUm-NAG0052';
SEQ ID NO:17是SEQ ID NO: 17 is
CmsAmsAmAmAfAmUfCfCfAmAmGmCmAmCmAmAmGmAm-NAG0052’;CmsAmsAmAmAfAmUfCfCfAmAmGmCmAmCmAmAmGmAm-NAG0052';
SEQ ID NO:18是SEQ ID NO: 18 is
CmsAmsAmAmAmAmUfCfCfAmAmGmCmAmCmAmAmGmAm-NAG0052’;CmsAmsAmAmAmAmAmUfCfCfAmAmGmCmAmCmAmAmGmAm-NAG0052';
SEQ ID NO:19是SEQ ID NO: 19 is
AmsAmsAmUmGfAmAfAfUfGmAmAmUmAmAmAmUmAmAm-NAG0052’;AmsAmsAmUmGfAmAfAfUfGmAmAmUmAmAmAmUmAmAm-NAG0052';
SEQ ID NO:20是SEQ ID NO:20 is
AmsAmsAmUmGmAmAfAfUfGmAmAmUmAmAmAmUmAmAm-NAG0052’;AmsAmsAmUmGmAmAfAfUfGmAmAmUmAmAmAmUmAmAm-NAG0052';
SEQ ID NO:21是SEQ ID NO:21 is
AmsAfsUmCfUmCf(-)hmpNA(U)UmCmAfUmCfCmUfUmGfGmUfGmsCmsUm;AmsAfsUmCfUmCf(-)hmpNA(U)UmCmAfUmCfCmUfUmGfGmUfGmsCmsUm;
SEQ ID NO:22是SEQ ID NO:22 is
AmsUfsAmAfUmCf(-)hmpNA(U)CmUmUfCmAfUmCfCmUfUmGfGmsUmsGm;AmsUfsAmAfUmCf(-)hmpNA(U)CmUmUfCmAfUmCfCmUfUmGfGmsUmsGm;
SEQ ID NO:23是SEQ ID NO:23 is
UmsCfsUmUfGmUf(-)hmpNA(G)CmUmUfGmGfAmUfUmUfUmUfGmsGmsUm;UmsCfsUmUfGmUf(-)hmpNA(G)CmUmUfGmGfAmUfUmUfUmUfGmsGmsUm;
SEQ ID NO:24是SEQ ID NO:24 is
UmsUfsAmUfUmUf(-)hmpNA(A)UmUmCfAmUfUmUfCmAfUmUfUmsUmsGm;UmsUfsAmUfUmUf(-)hmpNA(A)UmUmCfAmUfUmUfCmAfUmUfUmsUmsGm;
其中,Af=腺嘌呤2'-F核糖核苷(adenine 2'-F ribonucleoside);Cf=胞嘧啶2'-F核糖核苷(cytosine 2'-F ribonucleoside);Uf=尿嘧啶2'-F核糖核苷(uracil 2'-F ribonucleoside);Gf=鸟嘌呤2'-F核糖核苷(guanine 2'-F ribonucleoside);Am=腺嘌呤2'-OMe核糖核苷(adenine 2'-OMe ribonucleoside);Cm=胞嘧啶2'-OMe核糖核苷(cytosine 2'-OMe ribonucleoside);Gm=鸟嘌呤2'-OMe核糖核苷(guanine2'-OMe ribonucleoside);Um=尿嘧啶2'-OMe核糖核苷(uracil 2'-OMe ribonucleoside);Among them, Af = adenine 2'-F ribonucleoside (adenine 2'-F ribonucleoside); Cf = cytosine 2'-F ribonucleoside (cytosine 2'-F ribonucleoside); Uf = uracil 2'-F Ribonucleoside (uracil 2'-F ribonucleoside); Gf = guanine 2'-F ribonucleoside (guanine 2'-F ribonucleoside); Am = adenine 2'-OMe ribonucleoside (adenine 2'-OMe ribonucleoside ); Cm=cytosine 2'-OMe ribonucleoside (cytosine 2'-OMe ribonucleoside); Gm=guanine 2'-OMe ribonucleoside (guanine2'-OMe ribonucleoside); Um=uracil 2'-OMe ribonucleoside Nucleoside (uracil 2'-OMe ribonucleoside);
s表示与该字母s左右相邻的两个核苷酸之间为硫代磷酸二酯基连接;s means that the two nucleotides adjacent to the left and right of the letter s are connected by phosphorothioate groups;
在一些实施方案中,所述dsRNA选自如下结构或其药学上可接受的盐:In some embodiments, the dsRNA is selected from the following structures or pharmaceutically acceptable salts thereof:
其中,Af=腺嘌呤2'-F核糖核苷(adenine 2'-F ribonucleoside);Cf=胞嘧啶2'-F核糖核苷(cytosine 2'-F ribonucleoside);Uf=尿嘧啶2'-F核糖核苷(uracil 2'-F ribonucleoside);Am=腺嘌呤2'-OMe核糖核苷(adenine 2'-OMe ribonucleoside);Cm=胞嘧啶2'-OMe核糖核苷(cytosine 2'-OMe ribonucleoside);Gf=鸟嘌呤2'-F核糖核苷(guanine 2'-F ribonucleoside);Gm=鸟嘌呤2'-OMe核糖核苷(guanine 2'-OMe ribonucleoside);Um=尿嘧啶2'-OMe核糖核苷(uracil 2'-OMe ribonucleoside)。Among them, Af = adenine 2'-F ribonucleoside (adenine 2'-F ribonucleoside); Cf = cytosine 2'-F ribonucleoside (cytosine 2'-F ribonucleoside); Uf = uracil 2'-F Ribonucleoside (uracil 2'-F ribonucleoside); Am = adenine 2'-OMe ribonucleoside (adenine 2'-OMe ribonucleoside); Cm = cytosine 2'-OMe ribonucleoside (cytosine 2'-OMe ribonucleoside ); Gf = guanine 2'-F ribonucleoside (guanine 2'-F ribonucleoside); Gm = guanine 2'-OMe ribonucleoside (guanine 2'-OMe ribonucleoside); Um = uracil 2'-OMe Ribonucleoside (uracil 2'-OMe ribonucleoside).
在一些实施方案中,所述药学上可接受的盐可为本领域常规的盐,包括但不限于:钠盐、钾盐、铵盐、胺盐等。In some embodiments, the pharmaceutically acceptable salts can be conventional salts in the art, including but not limited to: sodium salts, potassium salts, ammonium salts, amine salts and the like.
在一些实施方案中,所述dsRNA选自TRD008007、TRD008008、TRD008009、TRD008010、TRD008007-1、TRD008008-1、TRD008009-1或TRD008010-1;In some embodiments, the dsRNA is selected from TRD008007, TRD008008, TRD008009, TRD008010, TRD008007-1, TRD008008-1, TRD008009-1, or TRD008010-1;
在一些实施方案中,所述dsRNA为TRD008007,其具有如下结构:In some embodiments, the dsRNA is TRD008007, which has the following structure:
在一些实施方案中,所述dsRNA为TRD008007-1,其具有如下结构:In some embodiments, the dsRNA is TRD008007-1, which has the following structure:
在一些实施方案中,所述dsRNA为TRD008008,其具有如下结构:In some embodiments, the dsRNA is TRD008008, which has the following structure:
在一些实施方案中,所述dsRNA为TRD008008-1,其具有如下结构:In some embodiments, the dsRNA is TRD008008-1, which has the following structure:
在一些实施方案中,所述dsRNA为TRD008009,其具有如下结构:In some embodiments, the dsRNA is TRD008009, which has the following structure:
在一些实施方案中,所述dsRNA为TRD008009-1,其具有如下结构:In some embodiments, the dsRNA is TRD008009-1, which has the following structure:
在一些实施方案中,所述dsRNA为TRD008010,其具有如下结构:In some embodiments, the dsRNA is TRD008010, which has the following structure:
在一些实施方案中,所述dsRNA为TRD008010-1,其具有如下结构:In some embodiments, the dsRNA is TRD008010-1, which has the following structure:
其中,Af=腺嘌呤2'-F核糖核苷(adenine 2'-F ribonucleoside);Cf=胞嘧啶2'-F核糖核苷(cytosine 2'-F ribonucleoside);Uf=尿嘧啶2'-F核糖核苷(uracil 2'-F ribonucleoside);Am=腺嘌呤2'-OMe核糖核苷(adenine 2'-OMe ribonucleoside);Cm=胞嘧啶2'-OMe核糖核苷(cytosine 2'-OMe ribonucleoside);Gf=鸟嘌呤2'-F核糖核苷(guanine 2'-F ribonucleoside);Gm=鸟嘌呤2'-OMe核糖核苷(guanine 2'-OMe ribonucleoside);Um=尿嘧啶2'-OMe核糖核苷(uracil 2'-OMe ribonucleoside)。Among them, Af = adenine 2'-F ribonucleoside (adenine 2'-F ribonucleoside); Cf = cytosine 2'-F ribonucleoside (cytosine 2'-F ribonucleoside); Uf = uracil 2'-F Ribonucleoside (uracil 2'-F ribonucleoside); Am = adenine 2'-OMe ribonucleoside (adenine 2'-OMe ribonucleoside); Cm = cytosine 2'-OMe ribonucleoside (cytosine 2'-OMe ribonucleoside ); Gf = guanine 2'-F ribonucleoside (guanine 2'-F ribonucleoside); Gm = guanine 2'-OMe ribonucleoside (guanine 2'-OMe ribonucleoside); Um = uracil 2'-OMe Ribonucleoside (uracil 2'-OMe ribonucleoside).
另一方面,本公开提供了一种药物组合物,其包含本公开所述的dsRNA。In another aspect, the present disclosure provides a pharmaceutical composition comprising the dsRNA described in the present disclosure.
在一些实施方案中,所述的药物组合物还包含一种或多种药学上可接受的赋形剂。各种递药系统是已知的并且可以用于本公开的dsRNA或药物组合物,例如封装在脂质体中、微粒、微囊、能够表达该化合物的重组细胞、受体介导的细胞内吞作用、构建核酸作为逆转录病毒或其他载体的一部分。In some embodiments, the pharmaceutical composition further comprises one or more pharmaceutically acceptable excipients. Various delivery systems are known and can be used for the dsRNA or pharmaceutical compositions of the present disclosure, such as encapsulation in liposomes, microparticles, microcapsules, recombinant cells capable of expressing the compound, receptor-mediated intracellular Endocytosis, construction of nucleic acids as part of retroviral or other vectors.
在一些实施方案中,本公开的dsRNA或药物组合物的给药方式是常规的,可通过局部给药(例如,直接注射或植入)或全身给药,也可通过口服、直肠或胃肠外途径进行给药,所述肠胃外途径包括但不限于皮下注射、静脉注射、肌肉注射、腹腔注射、透皮给药、吸入给药(如气溶胶)、粘膜给药(如舌下、鼻内给药)、颅内给药等。In some embodiments, the administration of the dsRNA or pharmaceutical composition of the present disclosure is conventional, and may be administered locally (e.g., by direct injection or implantation) or systemically, or orally, rectally, or gastrointestinally. The parenteral route includes but not limited to subcutaneous injection, intravenous injection, intramuscular injection, intraperitoneal injection, transdermal administration, inhalation administration (such as aerosol), mucosal administration (such as sublingual, nasal intracranial administration), intracranial administration, etc.
在一些实施方案中,本公开提供的dsRNA或药物组合物可以通过注射给予,例如,静脉内、肌内、皮内、皮下、十二指肠内或腹膜内注射。In some embodiments, a dsRNA or pharmaceutical composition provided herein can be administered by injection, eg, intravenous, intramuscular, intradermal, subcutaneous, intraduodenal, or intraperitoneal injection.
在一些实施方案中,本公开提供的dsRNA或药物组合物可被包装在试剂盒中。In some embodiments, the dsRNA or pharmaceutical compositions provided by the present disclosure can be packaged in kits.
另一方面,本公开提供了一种本公开所述的dsRNA或本公开所述的药物组合物在制备药物中的应用。In another aspect, the present disclosure provides an application of the dsRNA described in the present disclosure or the pharmaceutical composition described in the present disclosure in the preparation of medicine.
在一些实施方案中,所述的药物可用于预防和/或治疗肝炎、肝纤维化、非酒精性脂肪性肝炎(NASH)、非酒精性脂肪性肝病(NAFLD)、肝硬化、酒精性脂肪性肝炎(ASH)、酒精性脂肪肝病(ALD)、HCV-相关的硬化、药物引起的肝损伤或肝细胞坏死。In some embodiments, the medicament can be used to prevent and/or treat hepatitis, liver fibrosis, nonalcoholic steatohepatitis (NASH), nonalcoholic fatty liver disease (NAFLD), liver cirrhosis, alcoholic steatohepatitis Hepatitis (ASH), alcoholic fatty liver disease (ALD), HCV-related cirrhosis, drug-induced liver injury, or hepatocyte necrosis.
在一些实施方案中,所述的药物可用于预防和/或治疗与HSD17B13基因表达相关的疾病。在一些实施方案中,所述的与HSD17B13基因表达相关的疾病可为肝炎、肝纤维化、非酒精性脂肪性肝炎(NASH)、非酒精性脂肪性肝病(NAFLD)、肝硬化、酒精性脂肪性肝炎(ASH)、酒精性脂肪肝病(ALD)、HCV-相关的硬化、药物引起的肝损伤或肝细胞坏死。在一些实施方案中,所述的与HSD17B13基因表达相关的疾病可为慢性纤维炎性肝病。在一些实施方案中,所述慢性纤维炎性肝病与脂质液滴在肝脏中的蓄积及/或扩张有关。In some embodiments, the medicament can be used to prevent and/or treat diseases related to HSD17B13 gene expression. In some embodiments, the diseases associated with HSD17B13 gene expression can be hepatitis, liver fibrosis, nonalcoholic steatohepatitis (NASH), nonalcoholic fatty liver disease (NAFLD), liver cirrhosis, alcoholic fatty Acute hepatitis (ASH), alcoholic fatty liver disease (ALD), HCV-related cirrhosis, drug-induced liver injury, or hepatocyte necrosis. In some embodiments, the disease associated with HSD17B13 gene expression may be chronic fibrotic liver disease. In some embodiments, the chronic fibrotic liver disease is associated with accumulation and/or expansion of lipid droplets in the liver.
在一些实施方案中,所述的dsRNA或药物组合物的有效量或有效剂量为约0.001mg/kg体重至约200mg/kg体重、约0.01mg/kg体重至约100mg/kg体重或约0.5mg/kg体重至约50mg/kg体重。In some embodiments, the effective amount or effective dose of the dsRNA or pharmaceutical composition is about 0.001 mg/kg body weight to about 200 mg/kg body weight, about 0.01 mg/kg body weight to about 100 mg/kg body weight, or about 0.5 mg /kg body weight to about 50 mg/kg body weight.
另一方面,本公开提供了一种本公开所述的dsRNA或本公开所述的药物组合 物在制备用于预防和/或治疗受试者疾病的药物中的应用。In another aspect, the present disclosure provides a use of the dsRNA described in the present disclosure or the pharmaceutical composition described in the present disclosure in the preparation of a medicament for preventing and/or treating a disease in a subject.
在一些实施方案中,所述的疾病可为肝炎、肝纤维化、非酒精性脂肪性肝炎(NASH)、非酒精性脂肪性肝病(NAFLD)、肝硬化、酒精性脂肪性肝炎(ASH)、酒精性脂肪肝病(ALD)、HCV-相关的硬化、药物引起的肝损伤或肝细胞坏死。In some embodiments, the disease may be hepatitis, liver fibrosis, nonalcoholic steatohepatitis (NASH), nonalcoholic fatty liver disease (NAFLD), liver cirrhosis, alcoholic steatohepatitis (ASH), Alcoholic fatty liver disease (ALD), HCV-related cirrhosis, drug-induced liver injury, or hepatocyte necrosis.
在一些实施方案中,所述的疾病可为与HSD17B13基因表达相关的疾病。在一些实施方案中,所述的与HSD17B13基因表达相关的疾病可为肝炎、肝纤维化、非酒精性脂肪性肝炎(NASH)、非酒精性脂肪性肝病(NAFLD)、肝硬化、酒精性脂肪性肝炎(ASH)、酒精性脂肪肝病(ALD)、HCV-相关的硬化、药物引起的肝损伤或肝细胞坏死。在一些实施方案中,所述的与HSD17B13基因表达相关的疾病可为慢性纤维炎性肝病。在一些实施方案中,所述慢性纤维炎性肝病与脂质液滴在肝脏中的蓄积及/或扩张有关。In some embodiments, the disease may be a disease associated with HSD17B13 gene expression. In some embodiments, the diseases associated with HSD17B13 gene expression can be hepatitis, liver fibrosis, nonalcoholic steatohepatitis (NASH), nonalcoholic fatty liver disease (NAFLD), liver cirrhosis, alcoholic fatty Acute hepatitis (ASH), alcoholic fatty liver disease (ALD), HCV-related cirrhosis, drug-induced liver injury, or hepatocyte necrosis. In some embodiments, the disease associated with HSD17B13 gene expression may be chronic fibrotic liver disease. In some embodiments, the chronic fibrotic liver disease is associated with accumulation and/or expansion of lipid droplets in the liver.
另一方面,本公开提供了一种预防和/或治疗疾病的方法,其包括向受试者给予有效量或有效剂量的本公开所述的dsRNA或本公开所述的药物组合物。In another aspect, the present disclosure provides a method for preventing and/or treating a disease, which comprises administering to a subject an effective amount or dose of the dsRNA described in the present disclosure or the pharmaceutical composition described in the present disclosure.
在一些实施方案中,所述的疾病可为肝炎、肝纤维化、非酒精性脂肪性肝炎(NASH)、非酒精性脂肪性肝病(NAFLD)、肝硬化、酒精性脂肪性肝炎(ASH)、酒精性脂肪肝病(ALD)、HCV-相关的硬化、药物引起的肝损伤或肝细胞坏死。In some embodiments, the disease may be hepatitis, liver fibrosis, nonalcoholic steatohepatitis (NASH), nonalcoholic fatty liver disease (NAFLD), liver cirrhosis, alcoholic steatohepatitis (ASH), Alcoholic fatty liver disease (ALD), HCV-related cirrhosis, drug-induced liver injury, or hepatocyte necrosis.
在一些实施方案中,所述的疾病可为与HSD17B13基因表达相关的疾病。在一些实施方案中,所述的与HSD17B13基因表达相关的疾病可为肝炎、肝纤维化、非酒精性脂肪性肝炎(NASH)、非酒精性脂肪性肝病(NAFLD)、肝硬化、酒精性脂肪性肝炎(ASH)、酒精性脂肪肝病(ALD)、HCV-相关的硬化、药物引起的肝损伤或肝细胞坏死。在一些实施方案中,所述的与HSD17B13基因表达相关的疾病可为慢性纤维炎性肝病。在一些实施方案中,所述慢性纤维炎性肝病与脂质液滴在肝脏中的蓄积及/或扩张有关。In some embodiments, the disease may be a disease associated with HSD17B13 gene expression. In some embodiments, the diseases associated with HSD17B13 gene expression can be hepatitis, liver fibrosis, nonalcoholic steatohepatitis (NASH), nonalcoholic fatty liver disease (NAFLD), liver cirrhosis, alcoholic fatty Acute hepatitis (ASH), alcoholic fatty liver disease (ALD), HCV-related cirrhosis, drug-induced liver injury, or hepatocyte necrosis. In some embodiments, the disease associated with HSD17B13 gene expression may be chronic fibrotic liver disease. In some embodiments, the chronic fibrotic liver disease is associated with accumulation and/or expansion of lipid droplets in the liver.
另一方面,本公开提供了一种用于在体内或在体外沉默细胞中HSD17B13或其mRNA的方法,其包括将本公开所述的dsRNA或本公开所述的药物组合物引入该细胞中的步骤。In another aspect, the present disclosure provides a method for silencing HSD17B13 or its mRNA in a cell in vivo or in vitro, comprising introducing the dsRNA described in the present disclosure or the pharmaceutical composition described in the present disclosure into the cell step.
另一方面,本公开提供了一种抑制靶基因HSD17B13或其mRNA表达的方法,其包括向受试者给予有效量或有效剂量的本公开所述的dsRNA或本公开所述的药物组合物。In another aspect, the present disclosure provides a method for inhibiting the expression of the target gene HSD17B13 or its mRNA, which comprises administering to a subject an effective amount or dose of the dsRNA described in the present disclosure or the pharmaceutical composition described in the present disclosure.
本公开的dsRNA或药物组合物可以在细胞、细胞群、组织或受试者等对象中降低靶基因或其mRNA的表达水平,包括:向对象给予治疗有效量的本文所述的dsRNA或药物组合物,从而抑制靶基因或其mRNA在对象中的表达。The dsRNA or pharmaceutical composition of the present disclosure can reduce the expression level of the target gene or its mRNA in cells, cell groups, tissues or subjects, including: administering a therapeutically effective amount of the dsRNA or pharmaceutical combination described herein to the object substances, thereby inhibiting the expression of the target gene or its mRNA in the subject.
在一些实施方式中,所述对象已在先前被鉴定为在靶向的细胞、细胞群、组织或受试者中具有靶基因HSD17B13或其mRNA的病理性上调。In some embodiments, the subject has been previously identified as having pathological upregulation of the target gene HSD17B13 or mRNA thereof in the targeted cell, cell population, tissue or subject.
另一方面,本公开提供了一种递送寡核苷酸至肝脏的方法,其包括向受试者给予有效量或有效剂量的本公开所述的dsRNA或本公开所述的药物组合物。In another aspect, the present disclosure provides a method of delivering an oligonucleotide to the liver, which comprises administering to a subject an effective amount or dose of the dsRNA described in the present disclosure or the pharmaceutical composition described in the present disclosure.
另一方面,本公开提供了一种RNAi(RNA干扰)试剂,其包含本公开所述的dsRNA或本公开所述的药物组合物。In another aspect, the present disclosure provides an RNAi (RNA interference) agent comprising the dsRNA described in the present disclosure or the pharmaceutical composition described in the present disclosure.
另一方面,本公开还提供了一种细胞,其包含本公开所述的dsRNA或本公开所述的药物组合物。In another aspect, the present disclosure also provides a cell comprising the dsRNA described in the present disclosure or the pharmaceutical composition described in the present disclosure.
另一方面,本公开还提供了一种试剂盒,其包含本公开所述的dsRNA或本公开所述的药物组合物。In another aspect, the present disclosure also provides a kit comprising the dsRNA described in the present disclosure or the pharmaceutical composition described in the present disclosure.
本公开中,本公开所述dsRNA或药物组合物当接触到表达靶基因的细胞时,由例如:psiCHECK活性筛选和荧光素酶报告基因检测法,其他如PCR或基于分支DNA(bDNA)的方法、或基于蛋白质的方法,如免疫荧光分析法,例如Western Blot或流式细胞术测定的,本公开所述dsRNA或药物组合物会抑制靶基因的表达至少5%、至少10%、至少15%、至少20%、至少25%、至少30%、至少35%、至少40%、至少45%、至少50%、至少55%、至少60%、至少65%、至少70%、至少75%、至少80%、至少85%、至少90%、至少91%、至少92%、至少93%、至少94%、至少95%、至少96%、至少97%、至少98%、或至少99%。In the present disclosure, the dsRNA or pharmaceutical composition of the present disclosure, when contacted with cells expressing the target gene, is detected by, for example: psiCHECK activity screening and luciferase reporter gene assay, other methods such as PCR or based on branched DNA (bDNA) , or protein-based methods, such as immunofluorescence analysis, such as Western Blot or flow cytometry, the dsRNA or pharmaceutical composition of the present disclosure can inhibit the expression of the target gene by at least 5%, at least 10%, at least 15% , at least 20%, at least 25%, at least 30%, at least 35%, at least 40%, at least 45%, at least 50%, at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99%.
本公开中,本公开所述dsRNA或药物组合物当接触到表达靶基因的细胞时,由例如:psiCHECK活性筛选和荧光素酶报告基因检测法,其他如PCR或基于分支DNA(bDNA)的方法、或基于蛋白质的方法,如免疫荧光分析法,例如Western Blot或流式细胞术测定的,本公开所述dsRNA或药物组合物引起的靶基因mRNA剩余表达百分比为不高于99%、不高于95%、不高于90%、不高于85%、不高于80%、不高于75%、不高于70%、不高于65%、不高于60%、不高于55%、不高于50%、不高于45%、不高于40%、不高于35%、不高于30%、不高于25%、不高于20%、不高于15%、或不高于10%。In the present disclosure, the dsRNA or pharmaceutical composition of the present disclosure, when contacted with cells expressing the target gene, is detected by, for example: psiCHECK activity screening and luciferase reporter gene assay, other methods such as PCR or based on branched DNA (bDNA) , or protein-based methods, such as immunofluorescence analysis, such as Western Blot or flow cytometry, the remaining expression percentage of the target gene mRNA caused by the dsRNA or the pharmaceutical composition of the present disclosure is not higher than 99%, not high Not higher than 95%, not higher than 90%, not higher than 85%, not higher than 80%, not higher than 75%, not higher than 70%, not higher than 65%, not higher than 60%, not higher than 55% %, not higher than 50%, not higher than 45%, not higher than 40%, not higher than 35%, not higher than 30%, not higher than 25%, not higher than 20%, not higher than 15%, or not higher than 10%.
本公开中,本公开所述dsRNA或药物组合物当接触到表达靶基因的细胞时,由例如:psiCHECK活性筛选和荧光素酶报告基因检测法,其他如PCR或基于分支DNA(bDNA)的方法、或基于蛋白质的方法,如免疫荧光分析法,例如Western Blot、或流式细胞术测定的,dsRNA在保持在靶活性的同时,将脱靶活性减少了至少20%、至少25%、至少30%、至少35%、至少40%、至少45%、至少50%、至少55%、至少60%、至少65%、至少70%或至少75%。In the present disclosure, the dsRNA or pharmaceutical composition of the present disclosure, when contacted with cells expressing the target gene, is detected by, for example: psiCHECK activity screening and luciferase reporter gene assay, other methods such as PCR or based on branched DNA (bDNA) , or protein-based methods, such as immunofluorescence assays, e.g., Western Blot, or flow cytometry, the dsRNA reduces off-target activity by at least 20%, at least 25%, or at least 30%, while maintaining on-target activity , at least 35%, at least 40%, at least 45%, at least 50%, at least 55%, at least 60%, at least 65%, at least 70%, or at least 75%.
本公开中,本公开所述dsRNA或药物组合物当接触到表达靶基因的细胞时,由例如:psiCHECK活性筛选和荧光素酶报告基因检测法,其他如PCR或基于分支DNA(bDNA)的方法、或基于蛋白质的方法,如免疫荧光分析法,例如Western Blot、或流式细胞术测定的,dsRNA使在靶活性降低至多20%、至多19%、至多15%、至多10%、至多5%或超过1%的同时,将脱靶活性减少了至少20%、至少25%、至少30%、至少35%、至少40%、至少45%、至少50%、至少55%、至少60%、至少65%、至少70%或至少75%。In the present disclosure, the dsRNA or pharmaceutical composition of the present disclosure, when contacted with cells expressing the target gene, is detected by, for example: psiCHECK activity screening and luciferase reporter gene assay, other methods such as PCR or based on branched DNA (bDNA) , or protein-based methods, such as immunofluorescence assays, such as Western Blot, or flow cytometry, dsRNA reduces on-target activity by up to 20%, up to 19%, up to 15%, up to 10%, up to 5% or more than 1%, while reducing off-target activity by at least 20%, at least 25%, at least 30%, at least 35%, at least 40%, at least 45%, at least 50%, at least 55%, at least 60%, at least 65% %, at least 70%, or at least 75%.
本公开中,本公开所述dsRNA或药物组合物当接触到表达靶基因的细胞时, 由例如:psiCHECK活性筛选和荧光素酶报告基因检测法,其他如PCR或基于分支DNA(bDNA)的方法、或基于蛋白质的方法,如免疫荧光分析法,例如Western Blot、或流式细胞术测定的,dsRNA使在靶活性提高至少1%、至少5%、至少10%、至少15%、至少20%、至少25%、至少30%、至少35%、至少40%、至少45%、至少50%、至少55%、至少60%、至少65%、至少70%、至少75%或至少80%的同时,将脱靶活性减少了至少20%、至少25%、至少30%、至少35%、至少40%、至少45%、至少50%、至少55%、至少60%、至少65%、至少70%或至少75%。In the present disclosure, when the dsRNA or the pharmaceutical composition of the present disclosure contacts the cells expressing the target gene, it can be detected by, for example, psiCHECK activity screening and luciferase reporter gene detection method, other methods such as PCR or based on branched DNA (bDNA) , or protein-based methods, such as immunofluorescence assays, e.g., Western Blot, or flow cytometry, dsRNA increases on-target activity by at least 1%, at least 5%, at least 10%, at least 15%, at least 20% , at least 25%, at least 30%, at least 35%, at least 40%, at least 45%, at least 50%, at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, or at least 80% , reducing off-target activity by at least 20%, at least 25%, at least 30%, at least 35%, at least 40%, at least 45%, at least 50%, at least 55%, at least 60%, at least 65%, at least 70%, or At least 75%.
本公开还提供了一种制备dsRNA或药物组合物的方法,其包括:合成本公开所述的配体、siRNA、dsRNA或药物组合物。The present disclosure also provides a method for preparing dsRNA or a pharmaceutical composition, which includes: synthesizing the ligand, siRNA, dsRNA or pharmaceutical composition described in the present disclosure.
本公开引入WO2022223015A1全文。The present disclosure incorporates the entire text of WO2022223015A1.
本公开化合物可以存在特定的几何或立体异构体形式。本公开设想所有的这类化合物,包括顺式和反式异构体、(-)-和(+)-对对映体、(R)-和(S)-对映体、非对映异构体、(D)-异构体、(L)-异构体,及其外消旋混合物和其他混合物,例如对映异构体或非对映体富集的混合物,所有这些混合物都属于本公开的范围之内。烷基等取代基中可存在另外的不对称碳原子。所有这些异构体以及它们的混合物,均包括在本公开的范围之内。本公开的含有不对称碳原子的化合物可以以光学活性纯的形式或外消旋形式被分离出来。光学活性纯的形式可以从外消旋混合物拆分,或通过使用手性原料或手性试剂合成。Compounds of the present disclosure may exist in particular geometric or stereoisomeric forms. This disclosure contemplates all such compounds, including cis and trans isomers, (-)- and (+)-enantiomers, (R)- and (S)-enantiomers, diastereomers isomers, (D)-isomers, (L)-isomers, and their racemic and other mixtures, such as enantiomerically or diastereomerically enriched mixtures, all of which are within the scope of this disclosure. Additional asymmetric carbon atoms may be present in substituents such as alkyl groups. All such isomers, as well as mixtures thereof, are included within the scope of this disclosure. Compounds of the present disclosure containing asymmetric carbon atoms can be isolated in optically pure or racemic forms. Optically pure forms can be resolved from racemic mixtures or synthesized by using chiral starting materials or reagents.
可以通过的手性合成或手性试剂或者其他常规技术制备光学活性的(R)-和(S)-异构体以及D和L异构体。如果想得到本公开某化合物的一种对映体,可以通过不对称合成或者具有手性助剂的衍生作用来制备,其中将所得非对映体混合物分离,并且辅助基团裂开以提供纯的所需对映异构体。或者,当分子中含有碱性官能团(如氨基)或酸性官能团(如羧基)时,与适当的光学活性的酸或碱形成非对映异构体的盐,然后通过本领域所公知的常规方法进行非对映异构体拆分,然后回收得到纯的对映体。此外,对映异构体和非对映异构体的分离通常是通过使用色谱法完成的,所述色谱法采用手性固定相,并任选地与化学衍生法相结合(例如由胺生成氨基甲酸盐)。Optically active (R)- and (S)-isomers as well as D and L-isomers can be prepared by chiral synthesis or chiral reagents or other conventional techniques. If one enantiomer of a compound of the present disclosure is desired, it can be prepared by asymmetric synthesis or derivatization with chiral auxiliary agents, wherein the resulting diastereomeric mixture is separated and the auxiliary group is cleaved to provide pure desired enantiomer. Alternatively, when the molecule contains a basic functional group (such as an amino group) or an acidic functional group (such as a carboxyl group), a diastereoisomeric salt is formed with an appropriate optically active acid or base, and then a diastereomeric salt is formed by a conventional method known in the art. Diastereomeric resolution is performed and the pure enantiomers are recovered. Furthermore, the separation of enantiomers and diastereomers is usually accomplished by the use of chromatography using chiral stationary phases, optionally in combination with chemical derivatization methods (e.g. amines to amino groups formate).
本公开所述化合物的化学结构中,键
表示未指定构型,即如果化学结构中存在手性异构体,键
可以为
或
或者同时包含
和
两种构型。本公开所述化合物的化学结构中,键
并未指定构型,即键
的构型可以为E型或Z型,或者同时包含E和Z两种构型。
In the chemical structures of the compounds described in this disclosure, the bond Indicates unassigned configuration, i.e. if chiral isomers exist in the chemical structure, the bond can be or or both and Two configurations. In the chemical structures of the compounds described in this disclosure, the bond configuration is not specified, i.e. the key The configuration of can be E type or Z type, or contain both E and Z configurations.
在不指明构型的情况下,本公开的化合物和中间体还可以以不同的互变异构体形式存在,并且所有这样的形式包含于本公开的范围内。术语“互变异构体”或“互变异构体形式”是指可经由低能垒互变的不同能量的结构异构体。例如,质子互变异构体(也称为质子转移互变异构体)包括经由质子迁移的互变,如酮-烯醇及亚胺- 烯胺、内酰胺-内酰亚胺异构化。内酰胺-内酰亚胺平衡实例是在如下所示的A和B之间。Where no configuration is indicated, the compounds and intermediates of the present disclosure may also exist in different tautomeric forms and all such forms are included within the scope of the present disclosure. The term "tautomer" or "tautomeric form" refers to structural isomers of different energies that can interconvert via a low energy barrier. For example, proton tautomers (also known as prototropic tautomers) include interconversions via migration of a proton, such as keto-enol and imine-enamine, lactam-lactim isomerization . An example of a lactam-lactim equilibrium is between A and B as shown below.
本公开中的所有化合物可以被画成A型或B型。所有的互变异构形式在本发明的范围内。化合物的命名不排除任何互变异构体。All compounds in this disclosure can be drawn as Form A or Form B. All tautomeric forms are within the scope of the invention. The naming of compounds does not exclude any tautomers.
本公开还包括一些与本文中记载的那些相同的,但一个或多个原子被原子量或质量数不同于自然中通常发现的原子量或质量数的原子置换的同位素标记的本公开化合物。可结合到本公开化合物的同位素的实例包括氢、碳、氮、氧、磷、硫、氟、碘和氯的同位素,诸如分别为
2H、
3H、
11C、
13C、
14C、
13N、
15N、
15O、
17O、
18O、
31P、
32P、
35S、
18F、
123I、
125I和
36Cl等。
The present disclosure also includes certain isotopically labeled compounds of the disclosure that are identical to those described herein, but wherein one or more atoms are replaced by an atom of an atomic mass or mass number different from that normally found in nature. Examples of isotopes that can be incorporated into compounds of the present disclosure include isotopes of hydrogen, carbon, nitrogen, oxygen, phosphorus, sulfur, fluorine, iodine, and chlorine, such as 2 H, 3 H, 11 C, 13 C, 14 C, 13 N, 15 N, 15 O, 17 O, 18 O, 31 P, 32 P, 35 S, 18 F, 123 I, 125 I and 36 Cl, etc.
除另有说明,当一个位置被特别地指定为氘(D)时,该位置应理解为具有大于氘的天然丰度(其为0.015%)至少1000倍的丰度的氘(即,至少10%的氘掺入)。示例中化合物的具有大于氘的天然丰度可以是至少1000倍的丰度的氘、至少2000倍的丰度的氘、至少3000倍的丰度的氘、至少4000倍的丰度的氘、至少5000倍的丰度的氘、至少6000倍的丰度的氘或更高丰度的氘。本公开还包括各种氘化形式的式(I)、式(I’)、式(II)化合物。与碳原子连接的各个可用的氢原子可独立地被氘原子替换。本领域技术人员能够参考相关文献合成氘化形式的式(I)、式(I’)、式(II)化合物。在制备氘代形式的式(I)、式(I’)、式(II)化合物时可使用市售的氘代起始物质,或它们可使用常规技术采用氘代试剂合成,氘代试剂包括但不限于氘代硼烷、三氘代硼烷四氢呋喃溶液、氘代氢化锂铝、氘代碘乙烷和氘代碘甲烷等。Unless otherwise stated, when a position is specifically designated as deuterium (D), the position is understood to have an abundance of deuterium (i.e., at least 10 % deuterium incorporation). Exemplary compounds having a natural abundance greater than deuterium can be at least 1000 times more abundant deuterium, at least 2000 times more abundant deuterium, at least 3000 times more abundant deuterium, at least 4000 times more abundant deuterium, at least 5000 times more abundant deuterium, at least 6000 times more abundant deuterium, or more abundant deuterium. The present disclosure also includes compounds of Formula (I), Formula (I'), Formula (II) in various deuterated forms. Each available hydrogen atom attached to a carbon atom can be independently replaced by a deuterium atom. Those skilled in the art can refer to the relevant literature to synthesize deuterated forms of formula (I), formula (I '), formula (II) compounds. Commercially available deuterated starting materials can be used when preparing deuterated forms of compounds of formula (I), formula (I'), and formula (II), or they can be synthesized using conventional techniques using deuterated reagents, including But not limited to deuterated borane, trideuterioborane tetrahydrofuran solution, deuterated lithium aluminum hydride, deuterated ethyl iodide and deuterated methyl iodide, etc.
术语解释Terminology Explanation
为了更容易理解本公开,以下具体定义了一些技术和科学术语。除非在本文中另有明确定义,本文使用的所有其它技术和科学术语都具有本公开所属领域的一般技术人员通常理解的含义。For easier understanding of the present disclosure, some technical and scientific terms are specifically defined below. Unless clearly defined otherwise herein, all other technical and scientific terms used herein have the meaning commonly understood by one of ordinary skill in the art to which this disclosure belongs.
如本文所用,术语“HSD17B13”是指第13型17β羟基类固醇脱氢酶,属于17β羟基类固醇脱氢酶(hsd17b)家族的一员,催化17-酮-和17-羟基类固醇之间转化。该家族的成员具有各种功能,包括,举例而言,性激素、脂肪酸及胆汁酸的体内还原或氧化。hsd17b家族的成员的组织分布、次细胞定位、催化优先性有所差异,且由于他们也催化类固醇以外的其他底物(如脂质及类视色素)的转化,因此具有不同的底物特异性。HSD17B13主要表达于肝脏,定位于脂质液滴(LDs)表面。在患有简单脂肪变性的人类受试者中,HSD17B13蛋白的表达在脂肪肝LDs中明显上 调。当HSD17B13蛋白过表达时,会导致肝细胞中LDs数量和大小的增加,并且会显著增加肝脏的脂肪生成和甘油三酯(TG)含量。研究表明,HSD17B13基因表达在非酒精性脂肪肝疾病(NAFLD)与非酒精性脂肪肝炎(NASH)的发病机制中起着重要作用。HSD17B13(rs72613567:TA)功能缺失型突变体降低了谷丙转氨酶(ALT)和谷草转氨酶(AST)的水平,同时减少了脂肪肝患者的炎症和肝损伤。已证明HSD17B13与多种肝脏疾病相关,包括但不限于肝炎、肝纤维化、非酒精性脂肪性肝炎、非酒精性脂肪性肝病、肝硬化、酒精性脂肪性肝炎、酒精性脂肪肝病、HCV-相关的硬化、药物引起的肝损伤或肝细胞坏死或者慢性纤维炎性肝病。HSD17B13序列包括:GENBANK登录号NM_001136230.3,GENBANK登录号NM_001136230.3,As used herein, the term "HSD17B13" refers to type 13 17β hydroxysteroid dehydrogenase, a member of the 17β hydroxysteroid dehydrogenase (hsd17b) family, which catalyzes the conversion between 17-keto- and 17-hydroxysteroids. Members of this family have various functions including, for example, the reduction or oxidation of sex hormones, fatty acids, and bile acids in vivo. Members of the hsd17b family differ in their tissue distribution, subcellular localization, catalytic priority, and because they also catalyze the conversion of other substrates than steroids (such as lipids and retinoids), they have different substrate specificities . HSD17B13 is mainly expressed in the liver and localized on the surface of lipid droplets (LDs). In human subjects with uncomplicated steatosis, HSD17B13 protein expression was significantly upregulated in fatty liver LDs. When HSD17B13 protein was overexpressed, it led to an increase in the number and size of LDs in hepatocytes, and significantly increased hepatic lipogenesis and triglyceride (TG) content. Studies have shown that HSD17B13 gene expression plays an important role in the pathogenesis of nonalcoholic fatty liver disease (NAFLD) and nonalcoholic steatohepatitis (NASH). Loss-of-function mutants of HSD17B13 (rs72613567:TA) reduce alanine aminotransferase (ALT) and aspartate aminotransferase (AST) levels, while reducing inflammation and liver injury in fatty liver patients. HSD17B13 has been shown to be associated with a variety of liver diseases, including but not limited to hepatitis, liver fibrosis, nonalcoholic steatohepatitis, nonalcoholic fatty liver disease, cirrhosis, alcoholic steatohepatitis, alcoholic fatty liver disease, HCV- Associated cirrhosis, drug-induced liver injury or hepatocellular necrosis, or chronic fibroinflammatory liver disease. The HSD17B13 sequence includes: GENBANK accession number NM_001136230.3, GENBANK accession number NM_001136230.3,
如本公开所使用的,有义链(又称SS、SS链或正义链)是指包含与靶mRNA序列相同或基本上相同的序列的链;反义链(又称AS或AS链)是指具有与靶mRNA序列互补的序列的链。As used in this disclosure, the sense strand (also known as SS, SS strand or sense strand) refers to the strand comprising a sequence identical or substantially identical to the target mRNA sequence; the antisense strand (also known as AS or AS strand) is Refers to the strand that has a sequence that is complementary to the target mRNA sequence.
本公开中,正义链或反义链的“5’区域”也即“5’端”、“5’末端”,可替换使用。例如反义链5’区域的第2位至第8位的核苷酸,也可替换为反义链5’端的第2位至第8位的核苷酸。同理,正义链或反义链的“3’区域”、“3’末端”和“3’端”也可替换使用。In the present disclosure, the "5' region" of the sense strand or the antisense strand, that is, the "5' end" and "5' end", can be used interchangeably. For example, the 2nd to 8th nucleotides in the 5' region of the antisense strand can also be replaced with the 2nd to 8th nucleotides at the 5' end of the antisense strand. Similarly, the "3' region", "3' end" and "3' end" of the sense strand or the antisense strand can also be used interchangeably.
在描述本公开所述的正义链的上下文中,术语“与SEQ ID NO:1至SEQ ID NO:8任一的核苷酸序列相差不超过3个核苷酸序列,且包含至少15个连续核苷酸”旨在表示本文所述的siRNA正义链包含如SEQ ID NO:1至SEQ ID NO:8中任一正义链的至少15个连续核苷酸,或与SEQ ID NO:1至SEQ ID NO:8中任一正义链的至少15个连续核苷酸相差不超过3个核苷酸序列(任选地,相差不超过2个核苷酸序列;任选地,相差1个核苷酸序列)。任选地,本文所述的siRNA正义链包含SEQ ID NO:1至SEQ ID NO:8任一正义链的至少16个连续核苷酸,或与SEQ ID NO:1至SEQ ID NO:8任一正义链的至少16个连续核苷酸相差不超过3个核苷酸序列(任选地,相差不超过2个核苷酸序列,任选地,相差1个核苷酸序列)。In the context of describing the sense strand described in the present disclosure, the term "differs from the nucleotide sequence of any one of SEQ ID NO: 1 to SEQ ID NO: 8 by no more than 3 nucleotides and contains at least 15 consecutive Nucleotide" is intended to mean that the siRNA sense strand described herein comprises at least 15 consecutive nucleotides of any sense strand in SEQ ID NO: 1 to SEQ ID NO: 8, or with SEQ ID NO: 1 to SEQ ID NO: At least 15 consecutive nucleotides of any sense strand in ID NO:8 differ by no more than 3 nucleotide sequences (optionally, differ by no more than 2 nucleotide sequences; optionally, differ by 1 nucleoside acid sequences). Optionally, the siRNA sense strand described herein comprises at least 16 contiguous nucleotides of any sense strand of SEQ ID NO: 1 to SEQ ID NO: 8, or is identical to any of SEQ ID NO: 1 to SEQ ID NO: 8 At least 16 contiguous nucleotides of a sense strand differ by no more than 3 nucleotide sequences (optionally, differ by no more than 2 nucleotide sequences, optionally, differ by 1 nucleotide sequence).
在描述本公开所述的反义链的上下文中,术语“与SEQ ID NO:9至SEQ ID NO:12任一反义链相差不超过3个核苷酸序列,且包含至少15个连续核苷酸”旨在表示本文所述的siRNA反义链包含如SEQ ID NO:9至SEQ ID NO:12中任一反义链的至少15个连续核苷酸,或与SEQ ID NO:9至SEQ ID NO:12中任一反义链的至少15个连续核苷酸相差不超过3个核苷酸序列(任选地,相差不超过2个核苷酸序列,任选地,相差1个核苷酸序列)。In the context of describing the antisense strand described in the present disclosure, the term "differs from any antisense strand of SEQ ID NO: 9 to SEQ ID NO: 12 by no more than 3 nucleotide sequences and contains at least 15 consecutive core Nucleotide" is intended to mean that the siRNA antisense strand described herein comprises at least 15 consecutive nucleotides of any antisense strand in SEQ ID NO: 9 to SEQ ID NO: 12, or with SEQ ID NO: 9 to At least 15 consecutive nucleotides of any antisense strand in SEQ ID NO: 12 differ by no more than 3 nucleotide sequences (optionally, differ by no more than 2 nucleotide sequences, optionally, differ by 1 Nucleotide sequence).
如无特别说明,在本公开上下文中,“G”、“C”、“A”、“T”与“U”分别代表核苷酸,其分别包含鸟嘌呤、胞嘧啶、腺嘌呤、胸苷与尿嘧啶的碱基;小写字母d表示该字母d右侧相邻的一个核苷酸为脱氧核糖核苷酸;小写字母m表示该字母m左侧相邻的一个核苷酸为2’-甲氧基修饰的核苷酸;小写字母f表示该字母f左侧相邻的一个核苷酸为2'-氟代修饰的核苷酸;小写字母s表示与该字母s左右相邻 的两个核苷酸之间为硫代磷酸二酯基连接。Unless otherwise specified, in the context of the present disclosure, "G", "C", "A", "T" and "U" respectively represent nucleotides, which respectively contain guanine, cytosine, adenine, thymidine The base with uracil; the lowercase letter d indicates that the nucleotide adjacent to the right side of the letter d is deoxyribonucleotide; the lowercase letter m indicates that the nucleotide adjacent to the left side of the letter m is 2'- A methoxy-modified nucleotide; a lowercase letter f indicates that the nucleotide adjacent to the left of the letter f is a 2'-fluoro-modified nucleotide; a lowercase letter s indicates that the two adjacent nucleotides to the left and right of the letter s The nucleotides are linked by phosphorothioate groups.
如本公开所使用的,术语“2'-氟代(2’-F)修饰的核苷酸”指核苷酸的核糖基2'位的羟基被氟取代形成的核苷酸,“非氟代修饰的核苷酸”指核苷酸的核糖基2'位的羟基被非氟基团取代形成的核苷酸或核苷酸类似物。As used in this disclosure, the term "2'-fluoro (2'-F) modified nucleotide" refers to a nucleotide in which the hydroxyl group at the 2' position of the ribose group of the nucleotide is replaced by fluorine, and "non-fluorine "Modified nucleotides" refer to nucleotides or nucleotide analogues in which the hydroxyl group at the 2' position of the ribose group of a nucleotide is replaced by a non-fluorine group.
如本公开所使用的,术语“2'-甲氧基(2’-OMe)修饰的核苷酸”指核糖基的2'-羟基被甲氧基取代而形成的核苷酸。As used in the present disclosure, the term "2'-methoxy (2'-OMe) modified nucleotide" refers to a nucleotide in which the 2'-hydroxyl group of the ribose group is substituted with a methoxy group.
在本公开的上下文中,一个核苷酸序列与另外一个核苷酸序列存在“核苷酸差异”,是指前者与后者相比,相同位置的核苷酸的碱基种类发生了改变,例如,在后者中一个核苷酸碱基为A时,在前者的相同位置处的对应核苷酸碱基为U、C、G或者T的情况下,认定为两个核苷酸序列之间在该位置处存在核苷酸差异。在一些实施方式中,以无碱基核苷酸或其等同物代替原位置的核苷酸时,也可认为在该位置处产生了核苷酸差异。In the context of the present disclosure, a "nucleotide difference" exists between a nucleotide sequence and another nucleotide sequence, which means that the base type of the nucleotide at the same position has changed between the former and the latter, For example, when a nucleotide base in the latter is A, and the corresponding nucleotide base at the same position in the former is U, C, G or T, it is recognized as a difference between the two nucleotide sequences. There is a nucleotide difference at this position. In some embodiments, when the nucleotide at the original position is replaced by an abasic nucleotide or its equivalent, it can also be considered that a nucleotide difference occurs at that position.
术语“dsRNA”是指能够进行RNA干扰的双链RNA分子,包含正义链和反义链。The term "dsRNA" refers to a double-stranded RNA molecule capable of RNA interference, comprising a sense strand and an antisense strand.
如本文所使用的,术语“互补”或“反向互补”一词可互相替代使用,并具有本领域技术人员周知的含义,即,在双链核酸分子中,一条链的碱基与另一条链上的碱基以互补的方式相配对。在DNA中,嘌呤碱基腺嘌呤(A)始终与嘧啶碱基胸腺嘧啶(T)(或者在RNA中为尿嘧啶(U))相配对;嘌呤碱基鸟嘌呤(C)始终与嘧啶碱基胞嘧啶(G)相配对。每个碱基对都包括一个嘌呤和一个嘧啶。当一条链上的腺嘌呤始终与另一条链上的胸腺嘧啶(或尿嘧啶)配对,以及鸟嘌呤始终与胞嘧啶配对时,两条链被认为是彼此相互补的,以及从其互补链的序列中可以推断出该链的序列。与此相应地,“错配”在本领域中意指在双链核酸中,对应位置上的碱基并未以互补的形式配对存在。As used herein, the terms "complementary" or "reverse complementary" are used interchangeably and have the meaning known to those skilled in the art, that is, in a double-stranded nucleic acid molecule, the bases of one strand interact with the other. The bases on the strand pair up in a complementary fashion. In DNA, the purine base adenine (A) is always paired with the pyrimidine base thymine (T) (or uracil (U) in RNA); the purine base guanine (C) is always paired with the pyrimidine base Cytosine (G) is paired. Each base pair consists of a purine and a pyrimidine. When adenine on one strand always pairs with thymine (or uracil) on the other strand, and guanine always pairs with cytosine, the two strands are said to be complementary to each other, and The sequence of the chain can be deduced from the sequence. Correspondingly, "mismatch" in the art means that in a double-stranded nucleic acid, the bases at the corresponding positions are not paired in a complementary form.
术语“化学修饰”或“修饰”包括核苷酸经化学手段的所有改变,例如化学部分的添加或去除、或以一个化学部分取代另一个化学部分。The term "chemical modification" or "modification" includes all alterations of nucleotides by chemical means, such as the addition or removal of chemical moieties, or the substitution of one chemical moiety for another.
术语“碱基”包含任何已知的DNA和RNA碱基、碱基类似物,例如嘌呤或嘧啶,其还包括天然化合物腺嘌呤、胸腺嘧啶、鸟嘌呤、胞嘧啶、尿嘧啶、次黄苷和天然类似物。碱基类似物还可以是通用碱基。The term "base" includes any known DNA and RNA base, base analogs such as purine or pyrimidine, which also includes the natural compounds adenine, thymine, guanine, cytosine, uracil, inosine and Natural analogs. Base analogs can also be universal bases.
术语“平端”或“平末端”可互换使用,是指在siRNA的给定的末端没有非配对的核苷酸或核苷酸类似物,即,没有核苷酸突出。大多数情况下,两个末端都是平末端的siRNA将在其整个长度范围内是双链的。The terms "blunt end" or "blunt end" are used interchangeably and refer to the absence of unpaired nucleotides or nucleotide analogs at a given end of an siRNA, ie, no nucleotide overhangs. In most cases, siRNAs with both blunt-ended ends will be double-stranded throughout their entire length.
本公开提供的siRNA、dsRNA可以通过本领域常规的制备方法(例如固相合成和液相合成的方法)得到。其中,固相合成已经有商业化订制服务。可以通过使用具有相应修饰的核苷单体来将修饰的核苷酸基团引入本公开所述的siRNA中,制备具有相应修饰的核苷单体的方法及将修饰的核苷酸基团引入siRNA、dsRNA的 方法也是本领域技术人员所熟知的。The siRNA and dsRNA provided in the present disclosure can be obtained by conventional preparation methods in the art (such as methods of solid-phase synthesis and liquid-phase synthesis). Among them, solid-phase synthesis has commercialized customized services. A modified nucleotide group can be introduced into the siRNA described in the present disclosure by using a correspondingly modified nucleoside monomer, a method for preparing a correspondingly modified nucleoside monomer and introducing a modified nucleotide group The methods of siRNA and dsRNA are also well known to those skilled in the art.
在本公开的化学结构式中,
可以根据本文所述发明范围连接一个或多个任何基团;星号“*”表示手性中心。
In the chemical structural formula of the present disclosure, One or more of any group may be attached according to the scope of the invention described herein; an asterisk "*" indicates a chiral center.
除另有说明,“任选地”、“任选”、“可选的”或“可选”是指意味着随后所描述的事件或环境可以但不必发生,该说明包括该事件或环境发生或不发生的场合。例如“任选地,R
1和R
2直接相连成环”是指R
1和R
2直接相连成环可以发生但不必须存在,该说明包括R
1和R
2直接相连成环的情形和R
1和R
2不成环的情形。
Unless otherwise stated, "optionally", "optionally", "optionally" or "optionally" means that the subsequently described event or circumstance may but need not occur, and that the description includes that the event or circumstance occurs or where it does not occur. For example, "optionally, R 1 and R 2 are directly connected to form a ring" means that R 1 and R 2 are directly connected to form a ring, which can occur but not necessarily exist, and this description includes the situation where R 1 and R 2 are directly connected to form a ring and R 1 and R 2 do not form a ring.
术语“约”、“大约”是指数值在由本领域一般技术人员所测定的具体值的可接受误差范围内,所述数值部分取决于怎样测量或测定(即测量体系的限度)。例如,“约”可意味着在1内或超过1的标准差。或者,“约”或“基本上包含”可意味着至多20%的范围,例如1%至15%之间、在1%至10%之间、在1%至5%之间、在0.5%至5%之间、在0.5%至1%之间变化,本公开中,数字或数值范围之前有术语“约”的每种情况也包括给定数的实施方案。除非另外说明,否则当具体值在本申请和权利要求中出现时,“约”或“基本上包含”的含义应该假定为在该具体值的可接受误差范围内。The terms "about" and "approximately" mean that the value is within an acceptable error range for the particular value as determined by one of ordinary skill in the art, and the value depends in part on how it is measured or determined (ie, the limits of the measurement system). For example, "about" can mean within 1 or more than 1 standard deviation. Alternatively, "about" or "comprising essentially" may mean a range of up to 20%, such as between 1% and 15%, between 1% and 10%, between 1% and 5%, between 0.5% Variations of between 5% and 0.5% to 1%, and in this disclosure each instance of a number or numerical range preceded by the term "about" also include embodiments of the given number. Unless otherwise stated, when a specific value appears in the application and claims, the meaning of "about" or "comprising essentially" should be assumed to be within an acceptable error range for the specific value.
如本文所用,术语“包含”或“包括”意指包括所述的要素、整数或步骤,但是不排除任意其他要素、整数或步骤。在本文中,当使用术语“包含”或“包括”时,除非另有指明,否则也涵盖由所述及的要素、整数或步骤组成的情形。例如,当提及“包含”某个具体序列时,也旨在涵盖由该具体序列组成的情形。As used herein, the term "comprising" or "comprising" means including stated elements, integers or steps, but not excluding any other elements, integers or steps. Herein, when the term "comprising" or "comprises" is used, unless otherwise specified, it also covers the situation consisting of the mentioned elements, integers or steps. For example, when a reference is made to "comprising" a specific sequence, it is also intended to cover the situation consisting of that specific sequence.
如无特殊说明,本公开的“化合物”、“化学修饰”、“配体”、“dsRNA”、“核酸”和“RNAi”均可独立地以盐、混合盐或非盐(例如游离酸或游离碱)的形式存在。当以盐或混合盐的形式存在时,其可为药学上可接受的盐。Unless otherwise specified, the "compound", "chemical modification", "ligand", "dsRNA", "nucleic acid" and "RNAi" of the present disclosure can be independently salt, mixed salt or non-salt (such as free acid or in the form of the free base). When present in the form of a salt or mixed salt, it may be a pharmaceutically acceptable salt.
“药学上可接受的盐”可选自无机盐或有机盐,也可包括药学上可接受的酸加成盐和药学上可接受的碱加成盐。"Pharmaceutically acceptable salt" may be selected from inorganic salts or organic salts, and may also include pharmaceutically acceptable acid addition salts and pharmaceutically acceptable base addition salts.
“药学上可接受的酸加成盐”是指能够保留游离碱的生物有效性而无其它副作用的,与无机酸或有机酸所形成的盐。无机酸盐包括但不限于盐酸盐、氢溴酸盐、硫酸盐、硝酸盐、磷酸盐等;有机酸盐包括但不限于甲酸盐、乙酸盐、2,2-二氯乙酸盐、三氟乙酸盐、丙酸盐、己酸盐、辛酸盐、癸酸盐、十一碳烯酸盐、乙醇酸盐、葡糖酸盐、乳酸盐、癸二酸盐、己二酸盐、戊二酸盐、丙二酸盐、草酸盐、马来酸盐、琥珀酸盐、富马酸盐、酒石酸盐、柠檬酸盐、棕榈酸盐、硬脂酸盐、油酸盐、肉桂酸盐、月桂酸盐、苹果酸盐、谷氨酸盐、焦谷氨酸盐、天冬氨酸盐、苯甲酸盐、甲磺酸盐、苯磺酸盐、对甲苯磺酸盐、海藻酸盐、抗坏血酸盐、水杨酸盐、4-氨基水杨酸盐、萘二磺酸盐等。这些盐可通过本领域已知的方法制备。"Pharmaceutically acceptable acid addition salt" refers to a salt formed with an inorganic or organic acid that retains the biological effectiveness of the free base without other side effects. Inorganic acid salts include but not limited to hydrochloride, hydrobromide, sulfate, nitrate, phosphate, etc.; organic acid salts include but not limited to formate, acetate, 2,2-dichloroacetate , Trifluoroacetate, Propionate, Caproate, Caprylate, Caprate, Undecylenate, Glycolate, Gluconate, Lactate, Sebacate, Hexanoate glutarate, malonate, oxalate, maleate, succinate, fumarate, tartrate, citrate, palmitate, stearate, oleate , cinnamate, laurate, malate, glutamate, pyroglutamate, aspartate, benzoate, mesylate, benzenesulfonate, p-toluenesulfonate , alginate, ascorbate, salicylate, 4-amino salicylate, naphthalene disulfonate, etc. These salts can be prepared by methods known in the art.
“药学上可接受的碱加成盐”是指能够保持游离酸的生物有效性而无其它副作用的、与无机碱或有机碱所形成的盐。衍生自无机碱的盐包括但不限于钠盐、钾 盐、锂盐、铵盐、钙盐、镁盐、铁盐、锌盐、铜盐、锰盐、铝盐等。优选的无机盐为铵盐、钠盐、钾盐、钙盐及镁盐,优选钠盐。衍生自有机碱的盐包括但不限于以下的盐:伯胺类、仲胺类及叔胺类,被取代的胺类,包括天然的被取代胺类、环状胺类及碱性离子交换树脂,例如氨、异丙胺、三甲胺、二乙胺、三乙胺、三丙胺、乙醇胺、二乙醇胺、三乙醇胺、二甲基乙醇胺、2-二甲氨基乙醇、2-二乙氨基乙醇、二环己胺、赖氨酸、精氨酸、组氨酸、咖啡因、普鲁卡因、胆碱、甜菜碱、乙二胺、葡萄糖胺、甲基葡萄糖胺、可可碱、嘌呤、哌嗪、哌啶、N-乙基哌啶、聚胺树脂等。优选的有机碱包括异丙胺、二乙胺、乙醇胺、三甲胺、二环己基胺、胆碱及咖啡因。这些盐可通过本领域已知的方法制备。"Pharmaceutically acceptable base addition salt" refers to a salt formed with an inorganic base or an organic base that can maintain the biological effectiveness of the free acid without other side effects. Salts derived from inorganic bases include, but are not limited to, sodium, potassium, lithium, ammonium, calcium, magnesium, iron, zinc, copper, manganese, aluminum, and the like. Preferred inorganic salts are ammonium, sodium, potassium, calcium and magnesium salts, preferably sodium salts. Salts derived from organic bases include, but are not limited to, those of primary, secondary, and tertiary amines, substituted amines, including natural substituted amines, cyclic amines, and basic ion exchange resins , such as ammonia, isopropylamine, trimethylamine, diethylamine, triethylamine, tripropylamine, ethanolamine, diethanolamine, triethanolamine, dimethylethanolamine, 2-dimethylaminoethanol, 2-diethylaminoethanol, bicyclic Hexylamine, Lysine, Arginine, Histidine, Caffeine, Procaine, Choline, Betaine, Ethylenediamine, Glucosamine, Methylglucamine, Theobromine, Purine, Piperazine, Piperazine Pyridine, N-ethylpiperidine, polyamine resin, etc. Preferred organic bases include isopropylamine, diethylamine, ethanolamine, trimethylamine, dicyclohexylamine, choline and caffeine. These salts can be prepared by methods known in the art.
“烷基”指饱和的脂族烃基团,例如包括1至30个碳原子的直链和支链基团(C
1-C
30烷基),又例如含有1至6个碳原子的烷基(C
1-C
6烷基),又例如1至3个碳原子的烷基(C
1-C
3烷基)。非限制性实施例包括甲基、乙基、正丙基、异丙基、正丁基、异丁基、叔丁基、仲丁基、正戊基、1,1-二甲基丙基、1,2-二甲基丙基、2,2-二甲基丙基及其各种支链异构体等。
"Alkyl" refers to a saturated aliphatic hydrocarbon group, such as straight chain and branched chain groups (C 1 -C 30 alkyl groups) including 1 to 30 carbon atoms, and for example, alkyl groups containing 1 to 6 carbon atoms (C 1 -C 6 alkyl), another example is an alkyl (C 1 -C 3 alkyl) having 1 to 3 carbon atoms. Non-limiting examples include methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, tert-butyl, sec-butyl, n-pentyl, 1,1-dimethylpropyl, 1,2-dimethylpropyl, 2,2-dimethylpropyl and various branched isomers, etc.
术语“烯基”是指含有至少一个双键的烃基。烯基的非限制性实例包括但不限于:乙烯基、1-丙烯基、2-丙烯基、1-丁烯基或2-丁烯基及其各种支链异构体。The term "alkenyl" refers to a hydrocarbon group containing at least one double bond. Non-limiting examples of alkenyl include, but are not limited to, ethenyl, 1-propenyl, 2-propenyl, 1-butenyl, or 2-butenyl, and various branched isomers thereof.
术语“炔基”指含有至少一个三键的烃基。炔基的非限制性实例包括但不限于:乙炔基、1-丙炔基、2-丙炔基、1-丁炔基或2-丁炔基及其各种支链异构体。The term "alkynyl" refers to a hydrocarbon group containing at least one triple bond. Non-limiting examples of alkynyl include, but are not limited to, ethynyl, 1-propynyl, 2-propynyl, 1-butynyl, or 2-butynyl, and various branched isomers thereof.
术语“烷氧基”指-O-(烷基),其中烷基的定义如上所述。烷氧基的非限制性实例包括:甲氧基、乙氧基、丙氧基、丁氧基。The term "alkoxy" refers to -O-(alkyl), wherein alkyl is as defined above. Non-limiting examples of alkoxy include: methoxy, ethoxy, propoxy, butoxy.
“环烷基”指饱和或部分不饱和单环或多环环状烃取代基,环烷基环包含3至20个碳原子,优选包含3至6个碳原子,更优选包含5-6个碳原子。单环环烷基的非限制性实例包括环丙基、环丁基、环戊基、环戊烯基、环己基、环己烯基、环己二烯基等;多环环烷基包括螺环、并环和桥环的环烷基。"Cycloalkyl" refers to a saturated or partially unsaturated monocyclic or polycyclic cyclic hydrocarbon substituent, the cycloalkyl ring contains 3 to 20 carbon atoms, preferably contains 3 to 6 carbon atoms, more preferably contains 5-6 carbon atom. Non-limiting examples of monocyclic cycloalkyls include cyclopropyl, cyclobutyl, cyclopentyl, cyclopentenyl, cyclohexyl, cyclohexenyl, cyclohexadienyl, etc.; multicyclic cycloalkyls include spiro Cycloalkyls of rings, parallel rings and bridged rings.
“杂环烷基”指饱和或部分不饱和单环或多环环状烃取代基,其包含3至20个环原子,其中一个或多个环原子为选自氮、氧或S(O)
m(其中m是整数0至2)的杂原子,但不包括-O-O-、-O-S-或-S-S-的环部分,其余环原子为碳。优选包含3至12个环原子,其中1~4个是杂原子;更优选包含3至7个环原子。“杂环烷基”非限制性实例包括:
"Heterocycloalkyl" means a saturated or partially unsaturated monocyclic or polycyclic cyclic hydrocarbon substituent containing 3 to 20 ring atoms, one or more of which is selected from nitrogen, oxygen or S(O) m (where m is an integer from 0 to 2), but excluding ring portions of -OO-, -OS- or -SS-, the remaining ring atoms being carbon. Preferably it contains 3 to 12 ring atoms, of which 1 to 4 are heteroatoms; more preferably it contains 3 to 7 ring atoms. Non-limiting examples of "heterocycloalkyl" include:
所述杂环烷基环可以稠合于芳基或杂芳基环上,其中与母体结构连接在一起的环为杂环烷基,其非限制性实例包括:The heterocycloalkyl ring may be fused to an aryl or heteroaryl ring, wherein the ring bonded to the parent structure is a heterocycloalkyl, non-limiting examples of which include:
“芳基”指具有共轭的π电子体系的6至14元全碳单环或稠合多环(也就是共享毗邻碳原子对的环)基团,优选为6至12元,例如苯基和萘基。所述芳基环可以稠合于杂芳基、杂环烷基或环烷基环上,其中与母体结构连接在一起的环为芳基环,其非限制性实例包括:"Aryl" means a 6 to 14 membered all-carbon monocyclic or fused polycyclic (that is, rings sharing adjacent pairs of carbon atoms) group, preferably 6 to 12 membered, having a conjugated pi-electron system, such as phenyl and naphthyl. The aryl ring may be fused to a heteroaryl, heterocycloalkyl or cycloalkyl ring, where the ring bonded to the parent structure is an aryl ring, non-limiting examples of which include:
“杂芳基”指包含1至4个杂原子、5至14个环原子的杂芳族体系,其中杂原子选自氧、硫和氮。杂芳基优选为6至12元,更优选为5元或6元。例如。其非限制性实例包括:咪唑基、呋喃基、噻吩基、噻唑基、吡唑基、噁唑基(oxazolyl)、异噁唑基(isoxazolyl)、吡咯基、四唑基、吡啶基、嘧啶基、噻二唑、吡嗪基、三唑基、吲唑基、苯并咪唑基、
等。
"Heteroaryl" refers to a heteroaromatic system comprising 1 to 4 heteroatoms, 5 to 14 ring atoms, wherein the heteroatoms are selected from oxygen, sulfur and nitrogen. The heteroaryl group is preferably 6 to 12 membered, more preferably 5 or 6 membered. For example. Non-limiting examples thereof include: imidazolyl, furyl, thienyl, thiazolyl, pyrazolyl, oxazolyl, isoxazolyl, pyrrolyl, tetrazolyl, pyridyl, pyrimidinyl , Thiadiazole, pyrazinyl, triazolyl, indazolyl, benzimidazolyl, wait.
所述杂芳基环可以稠合于芳基、杂环烷基或环烷基环上,其中与母体结构连接在一起的环为杂芳基环,其非限制性实例包括:The heteroaryl ring may be fused to an aryl, heterocycloalkyl or cycloalkyl ring, wherein the ring bonded to the parent structure is a heteroaryl ring, non-limiting examples of which include:
术语“羟基”指-OH基团。The term "hydroxyl" refers to a -OH group.
术语“卤素”指氟、氯、溴或碘。The term "halogen" refers to fluorine, chlorine, bromine or iodine.
术语“氰基”指-CN。The term "cyano" refers to -CN.
术语“氨基”指-NH
2。
The term "amino" refers to -NH2 .
术语“硝基”指-NO
2。
The term "nitro" refers to -NO2 .
术语“氧代”指=O取代基。The term "oxo" refers to a =O substituent.
本公开中,“磷酸酯基团”可为磷酸一酯基团、磷酸二酯基团或磷酸三酯基团,优选磷酸二酯基团;“硫代磷酸酯基团”中的“磷酸酯基团”也具有同样的含义。In the present disclosure, a "phosphate group" can be a phosphoric acid monoester group, a phosphoric diester group or a phosphoric acid triester group, preferably a phosphoric diester group; Group" has the same meaning.
本公开中,硫代磷酸二酯基是指一个非桥接氧原子被硫原子替代而修饰的磷酸二酯基,可用
(M为S原子)互换使用。
In the present disclosure, phosphorothioate group refers to a phosphodiester group modified by replacing a non-bridging oxygen atom with a sulfur atom, which can be used (M is an S atom) are used interchangeably.
本公开中,“取代”指基团中的一个或多个氢原子,优选为最多5个,更优选为1~3个氢原子彼此独立地被相应数目的取代基取代。当取代基是酮或氧代(即,=O)时,则原子上有两个(2个)氢被替代。In the present disclosure, "substitution" refers to one or more hydrogen atoms in a group, preferably at most 5, more preferably 1 to 3 hydrogen atoms are independently substituted by a corresponding number of substituents. When a substituent is keto or oxo (ie, =0), then two (2) hydrogens on the atom are replaced.
本公开上下文中,基团
中的
部分可以替换为能够与相邻核苷酸实现连接的任意基团。
In the context of this disclosure, the group middle A moiety can be replaced by any group that enables linkage to adjacent nucleotides.
术语“连接”,当表示两个分子之间的联系时,指两个分子通过共价键连接或者两个分子经由非共价键(例如,氢键或离子键)关联,包括直接连接、间接连接。The term "linked", when referring to a link between two molecules, means that two molecules are connected by a covalent bond or that two molecules are associated by a non-covalent bond (for example, a hydrogen bond or an ionic bond), including direct connection, indirect connect.
术语“直接连接”指第一化合物或基团与第二化合物或基团在没有任何间插原子或原子基团的情况下连接。The term "directly linked" means that a first compound or group is linked to a second compound or group without any intervening atoms or groups of atoms.
术语“间接连接”指第一化合物或基团与第二化合物或基团通过中间基团、化合物或分子(例如,连接基团)连接。The term "indirectly linked" means that a first compound or group is linked to a second compound or group through an intervening group, compound or molecule (eg, a linking group).
“药物组合物”表示含有一种或多种本文所述化合物或其生理学上可药用的盐或前体药物与其他化学组分的混合物,以及其他组分例如生理学可药用的载体和赋形剂。药物组合物的目的是促进对生物体的给药,利于活性成分的吸收进而发 挥生物活性。"Pharmaceutical composition" means a mixture containing one or more compounds described herein, or a physiologically acceptable salt or prodrug thereof, and other chemical components, as well as other components such as physiologically acceptable carriers and excipients. Forming agent. The purpose of the pharmaceutical composition is to promote the administration to the organism, facilitate the absorption of the active ingredient and then exert its biological activity.
“药学上可接受的赋形剂”包括但不限于任何已经被美国食品和药物管理局(FDA)批准对于人类或家畜动物使用可接受的任何助剂、载体、助流剂、甜味剂、稀释剂、防腐剂、染料/着色剂、增香剂、表面活性剂、润湿剂、分散剂、助悬剂、稳定剂、等渗剂、溶剂或乳化剂。"Pharmaceutically acceptable excipients" include, but are not limited to, any adjuvants, carriers, glidants, sweeteners, Diluents, preservatives, dyes/colorants, flavor enhancers, surfactants, wetting agents, dispersing agents, suspending agents, stabilizers, isotonic agents, solvents or emulsifying agents.
如本文所使用的,术语“抑制”,可以与“减少”、“沉默”、“下调”、“阻抑”和其他类似术语交替使用,并且包括任何水平的抑制。抑制可通过这些变量中的一个或多个与对照水平相比的绝对或相对水平的减少来评估。该对照水平可以是本领域中使用的任何类型的对照水平,例如给药前基线水平或从类似的未经处理或经对照(例如仅缓冲液对照或惰性剂对照)处理的受试者、细胞、或样品确定的水平。例如,可以采用mRNA剩余表达量来表征siRNA对靶基因表达的抑制程度,如mRNA剩余表达量为不高于99%、不高于95%、不高于90%、不高于85%、不高于80%、不高于75%、不高于70%、不高于65%、不高于60%、不高于55%、不高于50%、不高于45%、不高于40%、不高于35%、不高于30%、不高于25%、不高于20%、不高于15%、或不高于10%。靶基因表达的抑制率可以采用
Luciferase Assay System检测,分别读取萤火虫(Firefly)化学发光值和海肾(Renilla)化学发光值,计算相对值Ratio=Ren/Fir,抑制率(%)=1-(Ratio+siRNA/Ratioreporter only)*100%;本公开中,剩余mRNA表达量比例(或剩余活性%)=100%-抑制率(%)。
As used herein, the term "inhibit", is used interchangeably with "reduce", "silence", "downregulate", "suppress" and other similar terms, and includes any level of inhibition. Inhibition can be assessed by a reduction in the absolute or relative level of one or more of these variables compared to control levels. The control level can be any type of control level used in the art, such as a pre-dose baseline level or from a similar untreated or control (eg buffer only or inert control) treated subject, cell , or sample-determined levels. For example, the residual expression of mRNA can be used to characterize the inhibition degree of siRNA on target gene expression, such as the remaining expression of mRNA is not higher than 99%, not higher than 95%, not higher than 90%, not higher than 85%, not higher than More than 80%, not more than 75%, not more than 70%, not more than 65%, not more than 60%, not more than 55%, not more than 50%, not more than 45%, not more than 40%, not higher than 35%, not higher than 30%, not higher than 25%, not higher than 20%, not higher than 15%, or not higher than 10%. The inhibition rate of target gene expression can be obtained by using Luciferase Assay System detection, read firefly (Firefly) chemiluminescence value and Renilla (Renilla) chemiluminescence value respectively, calculate relative value Ratio=Ren/Fir, inhibition rate (%)=1-(Ratio+siRNA/Ratioreporter only) *100%; in the present disclosure, the proportion of remaining mRNA expression (or remaining activity %)=100%-inhibition rate (%).
“有效量”或“有效剂量”包含足以改善或预防医学病症的症状或病症的量。有效量还意指足以允许或促进诊断的量。用于特定患者或兽医学受试者的有效量可依据以下因素而变化:如待治疗的病症、患者的总体健康情况、给药的方法途径和剂量以及副作用严重性。有效量可以是避免显著副作用或毒性作用的最大剂量或给药方案。An "effective amount" or "effective dose" includes an amount sufficient to ameliorate or prevent a symptom or condition of a medical condition. An effective amount also means an amount sufficient to permit or facilitate diagnosis. Effective amounts for a particular patient or veterinary subject may vary depending on factors such as the condition being treated, the general health of the patient, the method, route and dosage of administration, and the severity of side effects. An effective amount may be the maximum dose or dosing regimen that avoids significant side effects or toxic effects.
如本公开所使用的,“对象”、“患者”、“受试者”或“个体”可互换使用,包括人类或者非人类动物,例如哺乳动物,例如人或猴。As used in this disclosure, "subject", "patient", "subject" or "individual" are used interchangeably and include humans or non-human animals such as mammals such as humans or monkeys.
图1为缀合物TRD002218和TRD007205在给药后第7天TTR中mRNA的剩余表达量。Figure 1 shows the remaining mRNA expression levels in TTR of conjugates TRD002218 and TRD007205 on day 7 after administration.
图2为缀合物TRD002218和TRD007205在给药后第28天TTR中mRNA的剩余表达量。Figure 2 shows the remaining mRNA expression levels in TTR of conjugates TRD002218 and TRD007205 on day 28 after administration.
以下结合实施例进一步描述本公开,但这些实施例并非限制着本公开的范围。本公开实施例中未注明具体条件的实验方法,通常按照常规条件或按照原料或商 品制造厂商所建议的条件。未注明具体来源的试剂,则该试剂可自任意分子生物学试剂的供应商以用于分子生物学应用的质量/纯度而获得。The present disclosure is further described below in conjunction with examples, but these examples do not limit the scope of the present disclosure. The experimental methods not indicating the specific conditions in the embodiments of the present disclosure are usually in accordance with conventional conditions or in accordance with the conditions suggested by raw materials or commodity manufacturers. Reagents where a specific source is not stated may be obtained from any supplier of molecular biology reagents in quality/purity for molecular biology applications.
实施例1:化学修饰的制备Embodiment 1: Preparation of chemical modification
1.1合成化合物1-1a和化合物1-1b1.1 Synthesis of Compound 1-1a and Compound 1-1b
将化合物1(500mg,3.42mmol)和三乙胺(Et
3N,692mg,6.84mmol,0.95mL)溶于二氯甲烷(DCM,10mL)中,冰浴下滴加4-甲苯磺酰氯(TsCl,717mg,3.76mmol)的二氯甲烷(10mL)溶液,滴加完毕后反应在室温下搅拌过夜,待反应完毕后,用水淬灭,水相用二氯甲烷(15mL)提取三次,合并的有机相先用饱和碳酸氢钠水溶液(10mL)洗涤,再用饱和食盐水(20mL)洗涤,随后减压蒸干溶剂得到粗品2(820mg,80%),直接用于下一步反应。MS m/z:C
14H
21O
5S,[M+H]
+理论:301.10实测:301.2。
Compound 1 (500 mg, 3.42 mmol) and triethylamine (Et 3 N, 692 mg, 6.84 mmol, 0.95 mL) were dissolved in dichloromethane (DCM, 10 mL), and 4-toluenesulfonyl chloride (TsCl , 717mg, 3.76mmol) in dichloromethane (10mL) solution, after the dropwise addition, the reaction was stirred at room temperature overnight, after the reaction was completed, it was quenched with water, the aqueous phase was extracted three times with dichloromethane (15mL), and the combined organic The phase was washed with saturated aqueous sodium bicarbonate (10 mL) and then with saturated brine (20 mL), and then the solvent was evaporated to dryness under reduced pressure to obtain crude product 2 (820 mg, 80%), which was directly used in the next reaction. MS m / z: C14H21O5S , [M+H] + theoretical: 301.10 found: 301.2 .
将化合物3(239mg,1.22mmol)溶解于二甲基甲酰胺(DMF,10mL)中,冰浴下加入NaH(60%溶解在矿物油中,93mg,2.33mmol)溶液,搅拌该反应30分钟,然后滴加化合物2(350mg,1.16mmol),滴加完毕后反应在60℃下搅拌5小时,反应完毕后,加水淬灭,水相用乙酸乙酯(15mL)提取三次,合并的有机相先用水(10mL)洗涤三次,再用饱和食盐水(10mL)洗涤,随后减压蒸干溶剂,经反相制备HPLC(C
18,条件:5-50%(A:H
2O,B:CH
3CN),流速:70mL/min),冻干后得到220mg化合物4。MS m/z:C
19H
21N
5O
3Na,[M+Na]
+理论:390.16,实测:390.3。
Compound 3 (239mg, 1.22mmol) was dissolved in dimethylformamide (DMF, 10mL), NaH (60% dissolved in mineral oil, 93mg, 2.33mmol) solution was added under ice-cooling, and the reaction was stirred for 30 minutes, Then compound 2 (350mg, 1.16mmol) was added dropwise. After the dropwise addition, the reaction was stirred at 60°C for 5 hours. Wash with water (10mL) three times, then with saturated brine (10mL), then evaporate the solvent to dryness under reduced pressure, and perform reverse-phase preparative HPLC (C 18 , condition: 5-50% (A:H 2 O, B:CH 3 CN), flow rate: 70mL/min), obtain 220mg compound 4 after freeze-drying. MS m/z : C19H21N5O3Na , [M+Na] + theoretical : 390.16 , found: 390.3.
室温下将化合物4(1.50g,4.08mmol)溶解于20mL的醋酸和水(4:1)的混合 溶液中,60℃下搅拌30分钟,待反应完毕后减压蒸干溶剂,经反相制备HPLC(C
18,条件:5-25%(A:H
2O,B:CH
3CN),流速:70mL/min),冻干后得到1.10g化合物5。MS m/z:C
16H
18N
5O
3,[M+H]
+理论:328.13,实测:328.4。
Compound 4 (1.50g, 4.08mmol) was dissolved in 20mL of a mixed solution of acetic acid and water (4:1) at room temperature, stirred at 60°C for 30 minutes, after the reaction was completed, the solvent was evaporated to dryness under reduced pressure, and prepared by reverse phase HPLC (C 18 , condition: 5-25% (A:H 2 O, B:CH 3 CN), flow rate: 70 mL/min), 1.10 g of compound 5 was obtained after lyophilization. MS m/z: C16H18N5O3 , [M+H] + theoretical: 328.13 , found : 328.4.
将化合物5(1.00g,3.05mmol)溶于吡啶(Py,10mL)中,冰浴下滴4,4'-双甲氧基三苯甲基氯(DMTrCl,1.50g,4.58mmol)的吡啶(5mL)溶液,滴加完毕后反应在室温下搅拌过夜,待反应完毕后,用水淬灭,减压蒸干溶剂,经反相制备HPLC(C
18,条件:5-80%(A:H
2O,B:CH
3CN),流速:70mL/min),冻干后得到1.00g化合物6。MS m/z:C
37H
36N
5O
5,[M-H]
+理论:630.26,实测:630.5。消旋体化合物6经手性柱(Daicel
IE 250*4.6mm,5μm,A:正己烷,B:乙醇)拆分得410mg 6A(-)和435mg 6B(+)。
Compound 5 (1.00g, 3.05mmol) was dissolved in pyridine (Py, 10mL), and pyridine ( 5mL) solution, after the dropwise addition, the reaction was stirred overnight at room temperature. After the reaction was completed, it was quenched with water, and the solvent was evaporated to dryness under reduced pressure. Preparative HPLC (C 18 , condition: 5-80% (A:H 2 O, B:CH 3 CN), flow rate: 70mL/min), 1.00g of compound 6 was obtained after freeze-drying. MS m/z : C37H36N5O5 , [MH] + theoretical: 630.26 , found: 630.5. Racemate compound 6 was passed through a chiral column (Daicel IE 250*4.6mm, 5μm, A: n-hexane, B: ethanol) resolved to obtain 410mg 6A(-) and 435mg 6B(+).
将化合物6A(-)(200mg,0.32mmol),四氮唑(11mg,0.16mmol),N-甲基咪唑(5mg,0.06mmol),3A分子筛(500mg)溶于10mL的乙腈中,室温下加入化合物7(144mg,0.48mmol),在室温下搅拌过夜。反应完毕后,将分子筛过滤掉,加入二氯甲烷(30mL),饱和碳酸氢钠水溶液(10mL)洗涤三次,再用饱和食盐水(20mL)洗涤,滤液旋干并经反相制备HPLC(C
18,条件:5-100%(A:水,B:CH
3CN),流速:70mL/min),冻干后得到200mg化合物1-1a。MS m/z:C
40H
39N
6O
7P,[M-二异丙基+OH]
+理论:747.26,实测:747.6。1H NMR(400MHz,Acetonitrile-d
3)δ7.56,7.54(2s,1H),7.36-7.27(m,2H),7.24-7.21(m,7H),6.83-6.80(m,4H),4.12-4.10(m,2H),3.75-3.68(m,10H),3.20-2.80(m,2H),2.68-2.54(m,4H),1.22-1.04(m,18H).
Compound 6A(-) (200mg, 0.32mmol), tetrazolium (11mg, 0.16mmol), N-methylimidazole (5mg, 0.06mmol), 3A molecular sieves (500mg) were dissolved in 10mL of acetonitrile, and added at room temperature Compound 7 (144mg, 0.48mmol), stirred overnight at room temperature. After the reaction was completed, the molecular sieves were filtered off, dichloromethane (30 mL) was added, washed three times with saturated aqueous sodium bicarbonate (10 mL), and then washed with saturated brine (20 mL), the filtrate was spin-dried and subjected to reverse-phase preparative HPLC (C 18 , condition: 5-100% (A: water, B: CH 3 CN), flow rate: 70 mL/min), and 200 mg of compound 1-1a was obtained after lyophilization. MS m/z: C 40 H 39 N 6 O 7 P, [M-diisopropyl+OH] + theory: 747.26, found: 747.6. 1H NMR (400MHz, Acetonitrile-d 3 ) δ7.56, 7.54 ( 2s,1H),7.36-7.27(m,2H),7.24-7.21(m,7H),6.83-6.80(m,4H),4.12-4.10(m,2H),3.75-3.68(m,10H), 3.20-2.80(m,2H),2.68-2.54(m,4H),1.22-1.04(m,18H).
将化合物6B(+)(200mg,0.32mmol),四氮唑(11mg,0.16mmol),N-甲基咪唑(5mg,0.06mmol),3A分子筛(500mg)溶于10mL的乙腈中,室温下加入化合物7(144mg,0.48mmol),在室温下搅拌过夜。反应完毕后,将分子筛过滤掉,加入二氯甲烷(30mL),饱和碳酸氢钠水溶液(10mL)洗涤三次,再用饱和食盐水(20mL)洗涤,滤液旋干并经反相制备HPLC(C
18,条件:5-100%(A:水,B:CH
3CN),流速:70mL/min),冻干后得到200mg化合物1-1b。MS m/z:C
40H
39N6O
7P,[M-二异丙基+OH]
+理论:747.26,实测:747.5。
Compound 6B (+) (200mg, 0.32mmol), tetrazolium (11mg, 0.16mmol), N-methylimidazole (5mg, 0.06mmol), 3A molecular sieves (500mg) were dissolved in 10mL of acetonitrile, and added at room temperature Compound 7 (144mg, 0.48mmol), stirred overnight at room temperature. After the reaction was completed, the molecular sieves were filtered off, dichloromethane (30 mL) was added, washed three times with saturated aqueous sodium bicarbonate (10 mL), and then washed with saturated brine (20 mL), the filtrate was spin-dried and subjected to reverse-phase preparative HPLC (C 18 , condition: 5-100% (A: water, B: CH 3 CN), flow rate: 70 mL/min), and 200 mg of compound 1-1b was obtained after lyophilization. MS m/z: C40H39N6O7P , [M-diisopropyl+OH] + theory : 747.26 , found: 747.5.
1.2合成化合物1-6a1.2 Synthesis of compound 1-6a
将化合物1(10g,68.404mmol),化合物2(15g,62.186mmol)和三苯基膦(32.62g,124.371mmol)溶于无水THF(30mL),于0℃下缓慢滴加DIAD(24.656mL,124.371mmol)。该反应液在25度下反应12h.LCMS显示反应完成。将该反应液用乙酸乙酯(200mL)和水(200mL)萃取,有机相干燥将滤液浓缩,得到的残留物用正向柱纯化(DCM/MeOH=10/1)得目标产物3(20g).Compound 1 (10g, 68.404mmol), compound 2 (15g, 62.186mmol) and triphenylphosphine (32.62g, 124.371mmol) were dissolved in anhydrous THF (30mL), and DIAD (24.656mL , 124.371 mmol). The reaction solution was reacted at 25 degrees for 12h. LCMS showed that the reaction was complete. The reaction solution was extracted with ethyl acetate (200mL) and water (200mL), the organic phase was dried and the filtrate was concentrated, and the obtained residue was purified by a forward column (DCM/MeOH=10/1) to obtain the target product 3 (20g) .
将化合物3(20g,28.585mmol)溶于醋酸(24mL,426.016mmol)和H
2O(12mL)中,60℃搅拌1小时。之后将反应液旋干加入THF(12mL)和H
2O(12mL),80℃搅拌7小时。LCMS显示反应完成。将反应液加入乙酸乙酯(200mL)和水 (100mL)萃取,水相加入碳酸钠固体直到水相有大量固体析出。将固体过滤,用水洗涤,将滤饼用油泵拉干,得到目标化合物5(9g).
Compound 3 (20 g, 28.585 mmol) was dissolved in acetic acid (24 mL, 426.016 mmol) and H 2 O (12 mL), and stirred at 60° C. for 1 hour. Then the reaction solution was spin-dried, THF (12 mL) and H 2 O (12 mL) were added, and stirred at 80° C. for 7 hours. LCMS showed the reaction was complete. The reaction solution was added to ethyl acetate (200 mL) and water (100 mL) for extraction, and solid sodium carbonate was added to the aqueous phase until a large amount of solids precipitated out of the aqueous phase. The solid was filtered, washed with water, and the filter cake was pulled dry with an oil pump to obtain the target compound 5 (9g).
在氮气保护下,将化合物5(6.8g,18.581mmol)溶于吡啶(80mL)中,于0度下缓慢加入TMSCl(14.250mL,111.489mmol),搅拌2h。之后在0度下加入Isobutyryl chloride(2.044mL,19.511mmol),于25度下搅拌1h.LCMS显示反应完成。用二氯甲烷(200mL)和水(200mL)萃取,有机相干燥旋干后拌样,用正向柱纯化(DCM:MeOH=10:1)过柱,在4.8%处出峰),得到黄色油状化合物6(12g).Under nitrogen protection, compound 5 (6.8g, 18.581mmol) was dissolved in pyridine (80mL), and TMSCl (14.250mL, 111.489mmol) was slowly added at 0°C, and stirred for 2h. Then Isobutyryl chloride (2.044 mL, 19.511 mmol) was added at 0°C and stirred at 25°C for 1 h. LCMS showed that the reaction was complete. Extracted with dichloromethane (200mL) and water (200mL), the organic phase was dried and spin-dried, and the sample was mixed, and purified by forward column (DCM:MeOH=10:1) through the column, and the peak was at 4.8%) to obtain a yellow Oily compound 6 (12g).
在氮气保护下,将化合物6(5.5g,12.392mmol)溶于吡啶(30mL),加入MOLECULAR SIEVE 4A 1/16(7g,12.392mmol),然后在0℃下分批加入DMTrCl(5.04g,14.870mmol)固体,25℃反应2h.TLC(PE:EtOAc=1:1,Rf=0.69)显示反应已经完成。该反应液和TJN200879-040-P1合并一起处理。将反应液用乙酸乙酯(200mL)和水(200mL)萃取,有机相干燥旋干后拌样用正向柱纯化(PE:EtOAc过柱,在84%处出峰),得到黄色油状化合物7(12g)。Under nitrogen protection, compound 6 (5.5g, 12.392mmol) was dissolved in pyridine (30mL), MOLECULAR SIEVE 4A 1/16 (7g, 12.392mmol) was added, and DMTrCl (5.04g, 14.870 mmol) solid, reacted at 25°C for 2h. TLC (PE:EtOAc=1:1, Rf=0.69) showed that the reaction had been completed. The reaction liquid and TJN200879-040-P1 are combined and processed together. The reaction solution was extracted with ethyl acetate (200mL) and water (200mL), the organic phase was dried and spin-dried, and the mixed sample was purified by a forward column (PE:EtOAc was passed through the column, and the peak was at 84%) to obtain yellow oily compound 7 (12g).
将化合物7(12g,15.389mmol)溶于EtOAc(140mL),加入湿钯碳Pd/C(7g, 15.389mmol)该反应液在25度,氢气(15Psi)下反应2小时。TLC(PE:EtOAc=0:1,Rf=0.09)显示反应已经完成。将反应液过滤,滤饼用乙酸乙酯(30mL)冲洗三遍后,收集滤液。滤液旋干后加入50mL二氯甲烷和2mL三乙胺拌样用正向柱纯化(DCM:MeOH=10:1过柱,在0.5%处出峰),得到9g(黄色泡沫状固体).将所得消旋化合物SFC拆分,得到产品目标化合物7A(-)(3.9g)和目标化合物7B(+)(3.8g)。Compound 7 (12g, 15.389mmol) was dissolved in EtOAc (140mL), wet palladium on carbon Pd/C (7g, 15.389mmol) was added, and the reaction solution was reacted at 25 degrees under hydrogen (15Psi) for 2 hours. TLC (PE:EtOAc=0:1, Rf=0.09) showed that the reaction was complete. The reaction solution was filtered, and the filter cake was washed three times with ethyl acetate (30 mL), and the filtrate was collected. After the filtrate was spin-dried, 50 mL of dichloromethane and 2 mL of triethylamine were added to mix the sample and purified by forward column (DCM:MeOH=10:1 through the column, peak at 0.5%) to obtain 9 g (yellow foamy solid). The obtained racemic compound was resolved by SFC to obtain the product target compound 7A(-) (3.9g) and target compound 7B(+) (3.8g).
将化合物7A(-)(3.30g,5.40mmol),四氮唑(190mg,2.70mmol),1-甲基咪唑(90mg,1.10mmol),3A分子筛(500mg)溶于30mL的乙腈中,室温下加入化合物8(2.50g,8.10mmol),在室温下搅拌2h。反应完毕后,将分子筛过滤掉,加入DCM(150mL),饱和碳酸氢钠水溶液洗涤(30mL*3),再用饱和食盐水(30mL)洗涤,滤液旋干并经反相制备HPLC(C18,Condition:5-100%(A:water,B:CH3CN),流速:70mL/min),冻干后得到1-6a(2.9g,66%)。MS m/z:C43H55N7O7P[M+H]+,理论:812.38,实测:812.5。1H NMR(400MHz,Acetonitrile-d3)δ7.56,7.54(2s,1H),7.36-7.27(m,2H),7.24-7.21(m,7H),6.83-6.80(m,4H),4.12-4.10(m,2H),3.75-3.68(m,10H),3.20-2.80(m,2H),2.68-2.54(m,4H),1.22-1.04(m,18H).Compound 7A(-) (3.30g, 5.40mmol), tetrazolium (190mg, 2.70mmol), 1-methylimidazole (90mg, 1.10mmol), 3A molecular sieve (500mg) were dissolved in 30mL of acetonitrile, at room temperature Compound 8 (2.50 g, 8.10 mmol) was added and stirred at room temperature for 2 h. After the reaction was completed, molecular sieves were filtered off, DCM (150mL) was added, washed with saturated aqueous sodium bicarbonate (30mL*3), and then washed with saturated brine (30mL), the filtrate was spin-dried and subjected to reverse-phase preparative HPLC (C18, Condition : 5-100% (A: water, B: CH3CN), flow rate: 70mL/min), and 1-6a (2.9g, 66%) was obtained after lyophilization. MS m/z: C43H55N7O7P[M+H]+, theoretical: 812.38, measured: 812.5. 1H NMR (400MHz, Acetonitrile-d3) δ7.56,7.54(2s,1H),7.36-7.27(m,2H), 7.24-7.21(m,7H),6.83-6.80(m,4H),4.12-4.10(m,2H),3.75-3.68(m,10H),3.20-2.80(m,2H),2.68-2.54(m ,4H),1.22-1.04(m,18H).
1.3合成化合物1-7a1.3 Synthesis of compound 1-7a
在氮气保护下,将化合物1(5g,23.1272mmol),化合物2(6.76g,46.254mmol)和三苯基磷(7.28g,27.753mmol)溶于30mL二氧六环中,于0℃缓慢滴加入DEAD(5.502mL,27.753mmol)。滴加完成后,反应缓慢升温至25℃继续反应1h.在反应液里加入100mL H
2O和100mL EtOAc萃取,有机相合并干燥过滤浓缩后拌样过柱,用正向柱纯化(PE:EtOAc=1:1过柱得目标产物(4g)。
Under the protection of nitrogen, compound 1 (5g, 23.1272mmol), compound 2 (6.76g, 46.254mmol) and triphenylphosphine (7.28g, 27.753mmol) were dissolved in 30mL of dioxane, and slowly dropped at 0°C DEAD (5.502 mL, 27.753 mmol) was added. After the dropwise addition was completed, the reaction temperature was slowly raised to 25°C to continue the reaction for 1h. Add 100mL H 2 O and 100mL EtOAc to the reaction liquid for extraction. The organic phases were combined, dried, filtered, concentrated, mixed and passed through the column, and purified with a forward column (PE:EtOAc = 1:1 column to get the target product (4g).
将化合物3(3.3g)溶于HOAc(16mL)和H
2O(4mL),油浴60℃加热0.5h.将反应液旋干得到的残留物用正向柱纯化(PE:EtOAc=0:1过柱),得到目标产物4(3g)。
Compound 3 (3.3g) was dissolved in HOAc (16mL) and H 2 O (4mL), and heated in an oil bath at 60°C for 0.5h. The residue obtained by spinning the reaction solution to dryness was purified by a forward column (PE:EtOAc=0: 1 column), the target product 4 (3g) was obtained.
将化合物4(3g,8.873mmol)溶于5mL吡啶中,在氮气保护下于0℃缓慢滴加DMTrCl(3.91g,11.535mmol)的10mL吡啶的溶液。滴加完毕后反应升温至25℃并继续反应1h。在反应液中加入50mL水和100mL乙酸乙酯萃取。水相再用100mL乙酸乙酯萃取三次,有机相合并干燥过滤浓缩用正向柱纯化(用PE:EtOAc=2:1)。得到目标产物5(4g).Compound 4 (3 g, 8.873 mmol) was dissolved in 5 mL of pyridine, and a solution of DMTrCl (3.91 g, 11.535 mmol) in 10 mL of pyridine was slowly added dropwise at 0° C. under nitrogen protection. After the dropwise addition, the temperature of the reaction was raised to 25° C. and the reaction was continued for 1 h. 50 mL of water and 100 mL of ethyl acetate were added to the reaction solution for extraction. The aqueous phase was extracted three times with 100 mL of ethyl acetate, and the organic phases were combined, dried, filtered, concentrated, and purified by forward column (using PE:EtOAc=2:1). The target product 5 (4g) was obtained.
将化合物5(4g,5.769mmol)溶于甲醇(10mL),加入饱和的NH3甲醇溶液(40mL),0℃反应6h.将反应液旋干用正向柱纯化(用PE:EtOAc=0:1)得消旋化合物2.4g SFC拆分,得到目标产物6A(750mg,100%纯度)和目标产物6B(400mg,99.16%纯度)。Compound 5 (4g, 5.769mmol) was dissolved in methanol (10mL), and saturated NH3 methanol solution (40mL) was added, and reacted at 0°C for 6h. The reaction solution was spin-dried and purified by forward column (use PE:EtOAc=0:1 ) to get 2.4g of racemic compound. SFC resolution gave target product 6A (750mg, 100% purity) and target product 6B (400mg, 99.16% purity).
将化合物6A(-)(700mg,1.40mmol),四氮唑(50mg,0.70mmol),1-甲基咪唑(23mg,0.28mmol),3A分子筛(500mg)溶于10mL的乙腈中,室温下加入化合物7(630mg,2.10mmol),在室温下搅拌2h。反应完毕后,将分子筛过滤掉,加入DCM(50mL),饱和碳酸氢钠水溶液洗涤(10mL*3),再用饱和食盐水(20mL)洗涤,滤液旋干并经反相制备HPLC(C18,Condition:5-100%(A:水B:CH
3CN),流速:70mL/min),冻干后得到1-7a(700mg,72%)。MS m/z:C38H47N4O7PNa[M+Na]+,理论:725.32,实测:725.5。
Compound 6A(-) (700mg, 1.40mmol), tetrazolium (50mg, 0.70mmol), 1-methylimidazole (23mg, 0.28mmol), 3A molecular sieves (500mg) were dissolved in 10mL of acetonitrile, and added at room temperature Compound 7 (630mg, 2.10mmol), stirred at room temperature for 2h. After the reaction was completed, molecular sieves were filtered off, DCM (50 mL) was added, washed with saturated aqueous sodium bicarbonate (10 mL*3), and then washed with saturated brine (20 mL), the filtrate was spin-dried and subjected to reverse phase preparative HPLC (C18, Condition : 5-100% (A: water B: CH 3 CN), flow rate: 70mL/min), 1-7a (700mg, 72%) was obtained after lyophilization. MS m/z: C38H47N4O7PNa[M+Na]+, theory: 725.32, found: 725.5.
1.4合成化合物1-8a1.4 Synthesis of compound 1-8a
将化合物1(8.5g,76.508mmol),化合物2(30.64g,91.809mmol)溶于DMF(150mL),加入CS2CO3(29.91g,91.809mmol),反应于氮气保护下,90℃反应12h。LCMS检测反应完成。将反应液过滤,油泵旋干,正向柱分离纯化(80g,DCM/MeOH=10/1~5/1)得到目标产物3(13.5g,80%纯度)。Compound 1 (8.5g, 76.508mmol), compound 2 (30.64g, 91.809mmol) were dissolved in DMF (150mL), CS2CO3 (29.91g, 91.809mmol) was added, and reacted under nitrogen protection at 90°C for 12h. LCMS detected that the reaction was complete. The reaction solution was filtered, spin-dried by an oil pump, and separated and purified by a forward column (80g, DCM/MeOH=10/1-5/1) to obtain the target product 3 (13.5g, 80% purity).
将化合物3(10.5g,35.105mmol)溶于吡啶(65mL)和CH
3CN(65mL),向溶液中滴加BzCl(4.894mL,42.126mmol),于25℃反应2h。LCMS检测大部分原 料反应完成,加H
2O(100mL)淬灭,EtOAc(100mL X 3)萃取,干燥旋干,柱分离(合并TJN200872-101)纯化(80g,PE/EtOAc=10/1~0/1,DCM/MeOH=10/1)得到目标产物4(14g,90%纯度)。
Compound 3 (10.5g, 35.105mmol) was dissolved in pyridine (65mL) and CH 3 CN (65mL), and BzCl (4.894mL, 42.126mmol) was added dropwise to the solution, and reacted at 25°C for 2h. LCMS detected that most of the raw material reactions were completed, quenched by adding H 2 O (100mL), extracted with EtOAc (100mL X 3), dried and spin-dried, and purified by column separation (combined with TJN200872-101) (80g, PE/EtOAc=10/1~ 0/1, DCM/MeOH=10/1) afforded the target product 4 (14 g, 90% purity).
将化合物4(14g,36.694mmol)溶于HOAc(56mL,314.796mmol)和H
2O(14mL),于60℃反应2h,LCMS显示反应完成。油泵浓缩,正向柱分离(40g,DCM/MeOH=1/0~5/1)得到目标产物5(8.4g,90%纯度&2.4g,80%纯度)。
Compound 4 (14 g, 36.694 mmol) was dissolved in HOAc (56 mL, 314.796 mmol) and H 2 O (14 mL), reacted at 60° C. for 2 h, and LCMS showed that the reaction was complete. Oil pump concentration, forward column separation (40g, DCM/MeOH=1/0~5/1) gave target product 5 (8.4g, 90% purity & 2.4g, 80% purity).
将化合物5(7.4g,21.957mmol),DMAP(0.54g,4.391mmol),MOLECULAR SIEVE 4A(11.1g,2.967mmol)溶于pyridine(60mL),冰浴下搅拌10min,然后加入DMTrCl(8.93g,26.348mmol),反应搅拌1.8h.LCMS检测约19%原料剩余,约60%目标MS。合并(TJN200872-105&106)一起纯化。向反应液中加入H
2O(50mL),经DCM(50mL X 3)萃取,干燥,旋干,柱分离(120g,PE/(EA:DCM:TEA=1:1:0.05)=1/0~0/1至DCM/MeOH=10/1)得到目标化合物6(11g,89%纯度,TJN200872-105&106&107),回收原料(3.0g,70%纯度)。
Compound 5 (7.4g, 21.957mmol), DMAP (0.54g, 4.391mmol), MOLECULAR SIEVE 4A (11.1g, 2.967mmol) was dissolved in pyridine (60mL), stirred under ice bath for 10min, then DMTrCl (8.93g, 26.348mmol), the reaction was stirred for 1.8h. LCMS detected that about 19% of the raw material remained, and about 60% of the target MS. Combined (TJN200872-105&106) were purified together. Add H 2 O (50mL) to the reaction solution, extract with DCM (50mL X 3), dry, spin dry, column separation (120g, PE/(EA:DCM:TEA=1:1:0.05)=1/0 ~0/1 to DCM/MeOH=10/1) afforded the target compound 6 (11 g, 89% purity, TJN200872-105&106&107), recovered starting material (3.0 g, 70% purity).
化合物6(15g,22.041mmol)经SFC(DAICEL CHIRALPAK AD(250mm*50mm,10um);0.1%NH
3H
2O EtOH,B:45%-45%;200ml/min)分离得到目标产物6A(5.33g,94.29%纯度),目标产物6B(6.14g,97.91%纯度),化合物6 回收1.0g。
Compound 6 (15g, 22.041mmol) was separated by SFC (DAICEL CHIRALPAK AD (250mm*50mm, 10um); 0.1% NH 3 H 2 O EtOH, B: 45%-45%; 200ml/min) to obtain the target product 6A (5.33 g, 94.29% purity), the target product 6B (6.14g, 97.91% purity), compound 6 recovered 1.0g.
将化合物6B(-)(5.4g,8.92mmol),四氮唑(312mg,4.46mmol),1-甲基咪唑(146mg,1.78mmol),3A分子筛(500mg)溶于40mL的乙腈中,室温下加入化合物7(4g,13.4mmol),在室温下搅拌2h。反应完毕后,将分子筛过滤掉,加入DCM(200mL),饱和碳酸氢钠水溶液洗涤(30mL*3),再用饱和食盐水(50mL)洗涤,滤液旋干并经反相制备HPLC(C18,Condition:5-100%(A:water,B:CH
3CN),流速:70mL/min),冻干后得到1-8a(5.8g,80%)。MS m/z:C45H51N5O7P,[M+H]+,理论:804.36,实测:804.4。
Compound 6B(-) (5.4g, 8.92mmol), tetrazolium (312mg, 4.46mmol), 1-methylimidazole (146mg, 1.78mmol), 3A molecular sieves (500mg) were dissolved in 40mL of acetonitrile, at room temperature Compound 7 (4g, 13.4mmol) was added and stirred at room temperature for 2h. After the reaction was completed, the molecular sieves were filtered off, DCM (200mL) was added, washed with saturated aqueous sodium bicarbonate (30mL*3), then washed with saturated brine (50mL), the filtrate was spin-dried and subjected to reverse-phase preparative HPLC (C18, Condition : 5-100% (A: water, B: CH 3 CN), flow rate: 70mL/min), 1-8a (5.8g, 80%) was obtained after lyophilization. MS m/z: C45H51N5O7P, [M+H]+, Theoretical: 804.36, Found: 804.4.
实施例2:dsRNA的合成Example 2: Synthesis of dsRNA
dsRNA的合成与通常的亚磷酰胺固相合成法无异,在合成AS链5’第7位修饰的核苷酸时,使用上述合成的亚磷酰胺单体替换母序列原核苷酸。合成过程简要描述如下:于Dr.Oligo48合成器(Biolytic)上,以Universal CPG载体为起始,根据合成程序逐个连接核苷亚磷酰胺单体。除上述描述的AS链5’第7位的核苷亚磷酰胺单体外,其余核苷单体原料2’-F RNA、2’-O-甲基RNA等核苷亚磷酰胺单体购自上海兆维或苏州吉玛。采用5-乙基硫-1H-四唑(ETT)作为活化剂(0.6M乙腈溶液),使用0.22M的PADS溶于1:1体积比的乙腈和三甲基吡啶(苏州柯乐玛)溶液作为硫化试剂,使用碘吡啶/水溶液(柯乐玛)作为氧化剂。The synthesis of dsRNA is the same as the usual solid-phase phosphoramidite synthesis method. When synthesizing the modified nucleotide at the 5' 7th position of the AS chain, the phosphoramidite monomer synthesized above is used to replace the original nucleotide of the parent sequence. A brief description of the synthesis process is as follows: On Dr. Oligo48 synthesizer (Biolytic), start with Universal CPG carrier, and link nucleoside phosphoramidite monomers one by one according to the synthesis procedure. Except for the nucleoside phosphoramidite monomer at the 5' 7th position of the AS chain described above, other nucleoside monomer raw materials such as 2'-F RNA, 2'-O-methyl RNA and other nucleoside phosphoramidite monomers can be purchased From Shanghai Zhaowei or Suzhou Jima. Using 5-ethylthio-1H-tetrazole (ETT) as the activator (0.6M acetonitrile solution), using 0.22M PADS dissolved in acetonitrile and collidine (Suzhou Kelema) solution with a volume ratio of 1:1 As a vulcanizing agent, iodopyridine/water solution (Koroma) was used as an oxidizing agent.
固相合成完成后,寡核糖核苷酸自该固体支撑物裂解,采用3:1的28%氨水和乙醇溶液在50℃条件下浸泡16小时。然后离心,将上清液转移到另一个离心管中,浓缩蒸发干后,使用C18反向色谱纯化,流动相为0.1M TEAA和乙腈,并使用3%三氟乙酸溶液脱除DMTr。目标寡核苷酸收集后冻干,并经LC-MS鉴定为目标产物,再经过UV(260nm)定量。After the solid-phase synthesis is completed, the oligoribonucleotide is cleaved from the solid support, and soaked at 50° C. for 16 hours using a 3:1 28% ammonia water and ethanol solution. Then centrifuged, the supernatant was transferred to another centrifuge tube, concentrated and evaporated to dryness, purified by C18 reverse chromatography, the mobile phase was 0.1M TEAA and acetonitrile, and 3% trifluoroacetic acid solution was used to remove DMTr. The target oligonucleotides were collected and freeze-dried, identified as the target product by LC-MS, and then quantified by UV (260nm).
所得到的单链寡核苷酸,根据等摩尔比,按照互补配对,退火,最后所得到的dsRNA溶于1×PBS中,并调整至实验所需浓度备用。The obtained single-stranded oligonucleotides were annealed according to the equimolar ratio and complementary pairing, and finally the obtained dsRNA was dissolved in 1×PBS and adjusted to the required concentration for the experiment.
实施例3:psiCHECK活性筛选实验Example 3: psiCHECK activity screening experiment
dsRNA合成见前述,质粒来源于生工生物工程(上海)股份有限公司。psiCHECK实验耗材如表1所示。See above for dsRNA synthesis, and the plasmid was from Sangon Bioengineering (Shanghai) Co., Ltd. The psiCHECK experimental consumables are listed in Table 1.
表1.psiCHECK实验耗材和试剂Table 1. psiCHECK Assay Consumables and Reagents
实验步骤:细胞铺板、细胞转染,其中,转染复合物具体配制量如表2所示。Experimental steps: cell plating, cell transfection, wherein, the specific preparation amount of the transfection complex is shown in Table 2.
表2. 96孔板每孔所需转染复合物用量Table 2. The amount of transfection complex required for each well of a 96-well plate
the | 用量/孔Dosage/hole | Opti-MEMOpti-MEM |
质粒混合物Plasmid mix | 0.05μL0.05μL | 10μL10 μL |
Lipofectamine 2000Lipofectamine 2000 | 0.2μL0.2 μL | 10μL10 μL |
注:Lipo:0.2μL/孔;质粒:0.05μL/孔;Opti-MEM:10μL/孔。Note: Lipo: 0.2 μL/well; plasmid: 0.05 μL/well; Opti-MEM: 10 μL/well.
依照表3,根据不同的实验需求稀释至不同浓度作为工作液备用,现用现配。转染24h后,按照
Luciferase Assay System检测试剂盒的实验操作方案进行检测。计算相对值海肾/萤火虫比值(Ratio=Ren/Fir);计算抑制率1-(Ratio+siRNA/Ratioreporter only)*100%=抑制率(%);本公开中,剩余活性%(也称为mRNA剩余表达量%或mRNA剩余表达比例)=100%-抑制率(%)。
According to Table 3, dilute to different concentrations according to different experimental requirements and use it as a working solution for future use. 24h after transfection, according to The experimental operation scheme of Luciferase Assay System detection kit was used for detection. Calculate relative value Renilla/Firefly ratio (Ratio=Ren/Fir); Calculate inhibition rate 1-(Ratio+siRNA/Ratioreporter only)*100%=Inhibition rate (%); In this disclosure, residual activity % (also referred to as mRNA remaining expression amount % or mRNA remaining expression ratio)=100%-inhibition rate (%).
表3.多浓度点dsRNA稀释方案Table 3. Multiple concentration point dsRNA dilution scheme
终浓度(nM)Final concentration (nM) | 加水与dsRNAAdd water and dsRNA |
// | // |
4040 | 4μL siRNA(20μM)+96μL H 2O 4 μL siRNA (20 μM)+96 μL H 2 O |
13.3333333313.33333333 | 30μL dsRNA+60μL H 2O 30 μL dsRNA + 60 μL H2O |
4.4444444444.444444444 | 30μL dsRNA+60μL H 2O 30 μL dsRNA + 60 μL H2O |
1.4814814811.481481481 | 30μL dsRNA+60μL H 2O 30 μL dsRNA + 60 μL H2O |
0.493827160.49382716 | 30μL dsRNA+60μL H 2O 30 μL dsRNA + 60 μL H2O |
0.1646090530.164609053 | 30μL dsRNA+60μL H 2O 30 μL dsRNA + 60 μL H2O |
0.0548696840.054869684 | 30μL dsRNA+60μL H 2O 30 μL dsRNA + 60 μL H2O |
0.0182898950.018289895 | 30μL dsRNA+60μL H 2O 30 μL dsRNA + 60 μL H2O |
0.0060966320.006096632 | 30μL dsRNA+60μL H 2O 30 μL dsRNA + 60 μL H2O |
0.0020322110.002032211 | 30μL dsRNA+60μL H 2O 30 μL dsRNA + 60 μL H2O |
0.0006774040.000677404 | 30μL dsRNA+60μL H 2O 30 μL dsRNA + 60 μL H2O |
实施例4:不同化学修饰表征Embodiment 4: Characterization of different chemical modifications
其中:我们将由2-羟甲基-1,3-丙二醇为起始原料合成的核苷酸定义hmpNA;Among them: we define hmpNA from nucleotides synthesized from 2-hydroxymethyl-1,3-propanediol as the starting material;
(+)hmpNA(A)为实施例1.1节中核苷亚磷酰胺单体1-1b通过固相合成获得,绝对构型为(S)-hmpNA(A);(+)hmpNA(A) is obtained by solid-phase synthesis of the nucleoside phosphoramidite monomer 1-1b in Example 1.1, and the absolute configuration is (S)-hmpNA(A);
(-)hmpNA(A)为实施例1.1节中核苷亚磷酰胺单体1-1a通过固相合成获得,绝对构型为(R)-hmpNA(A);(-)hmpNA(A) is obtained by solid-phase synthesis of nucleoside phosphoramidite monomer 1-1a in Example 1.1, and its absolute configuration is (R)-hmpNA(A);
类似的,替换hmpNA的碱基种类,通过固相合成获得以下结构并确认绝对构型:Similarly, replacing the base species of hmpNA, the following structure was obtained by solid-phase synthesis and the absolute configuration was confirmed:
(+)hmpNA(G),绝对构型为(S)-hmpNA(G);(+)hmpNA(G), the absolute configuration is (S)-hmpNA(G);
(-)hmpNA(G),绝对构型为(R)-hmpNA(G);(-)hmpNA(G), the absolute configuration is (R)-hmpNA(G);
(+)hmpNA(C),绝对构型为(S)-hmpNA(C);(+)hmpNA(C), the absolute configuration is (S)-hmpNA(C);
(-)hmpNA(C),绝对构型为(R)-hmpNA(C);(-)hmpNA(C), the absolute configuration is (R)-hmpNA(C);
(+)hmpNA(U),绝对构型为(R)-hmpNA(U);(+)hmpNA(U), the absolute configuration is (R)-hmpNA(U);
(-)hmpNA(U),绝对构型为(S)-hmpNA(U)。(-)hmpNA(U), the absolute configuration is (S)-hmpNA(U).
(S)-hmpNA(G),(R)-hmpNA(G),(S)-hmpNA(C),(R)-hmpNA(C),(S)-hmpNA(U)和(R)-hmpNA(U)的绝对构型由其中间体或衍生物经X-Ray衍射而确认。(S)-hmpNA(G), (R)-hmpNA(G), (S)-hmpNA(C), (R)-hmpNA(C), (S)-hmpNA(U) and (R)-hmpNA The absolute configuration of (U) was confirmed by X-Ray diffraction of its intermediates or derivatives.
中间体或衍生物的结构为:The structure of the intermediate or derivative is:
TJ-NA067:检测晶体为无色块状(0.30×0.10×0.04mm3),属于单斜晶系P21空间群。晶胞参数
α=90°,β=118.015(4)°,γ=90°,
Z=4。计算密度Dc=1.389g/cm3,单胞中电子数F(000)=504.0,单胞的线性吸收系数μ(Cu Kα)=0.840mm–1,衍射实验温度T=150.00(11)K.
TJ-NA067: The detection crystal is a colorless block (0.30×0.10×0.04mm3), which belongs to the monoclinic crystal system P21 space group. Cell parameters α=90°, β=118.015(4)°, γ=90°, Z=4. The calculated density Dc=1.389g/cm3, the number of electrons in the unit cell F(000)=504.0, the linear absorption coefficient of the unit cell μ(Cu Kα)=0.840mm–1, and the diffraction experiment temperature T=150.00(11)K.
6A(+):检测晶体为无色块状(0.30×0.20×0.10mm3),属于单斜晶系P21空间群。晶胞参数
α=90°,β=113.876(3)°,γ=90°,
Z=2。计算密度Dc=0.999g/cm3,单胞中电子数F(000)=1318.0,单胞的线性吸收系数μ(Cu Kα)=0.570mm–1,衍射实验温度T=100.01(18)K。
6A(+): The detection crystal is a colorless block (0.30×0.20×0.10mm3), belonging to the monoclinic crystal system P21 space group. Cell parameters α=90°, β=113.876(3)°, γ=90°, Z=2. The calculated density Dc=0.999g/cm3, the number of electrons in the unit cell F(000)=1318.0, the linear absorption coefficient of the unit cell μ(Cu Kα)=0.570mm–1, and the diffraction experiment temperature T=100.01(18)K.
TJ-NA048:检测晶体为无色针状(0.30×0.04×0.04mm3),属于单斜晶系P1空间群。晶胞参数
α=85.007(4)°,β=88.052(4)°,γ=70.532(4)°,
Z=2。计算密度Dc= 1.366g/cm3,单胞中电子数F(000)=620.0,单胞的线性吸收系数μ(Cu Kα)=0.856mm–1,衍射实验温度T=150.00(13)K。
TJ-NA048: The detected crystal is colorless needle-shaped (0.30×0.04×0.04mm3), belonging to the monoclinic P1 space group. Cell parameters α=85.007(4)°, β=88.052(4)°, γ=70.532(4)°, Z=2. The calculated density Dc = 1.366g/cm3, the number of electrons in the unit cell F(000) = 620.0, the linear absorption coefficient of the unit cell μ (Cu Kα) = 0.856mm–1, and the diffraction experiment temperature T = 150.00(13)K.
TJ-NA092:检测晶体为无色棱柱状(0.30×0.10×0.10mm3),属于三斜晶系P1空间群。晶胞参数
α=93.146(2)°,β=101.266(2)°,γ=96.134(2)°,
Z=2。计算密度Dc=1.412g/cm3,单胞中电子数F(000)=228.0,单胞的线性吸收系数μ(Cu Kα)=0.945mm–1,衍射实验温度T=100.00(10)K。
TJ-NA092: The detection crystal is a colorless prism (0.30×0.10×0.10mm3), belonging to the P1 space group of the triclinic crystal system. Cell parameters α=93.146(2)°, β=101.266(2)°, γ=96.134(2)°, Z=2. The calculated density Dc=1.412g/cm3, the number of electrons in the unit cell F(000)=228.0, the linear absorption coefficient of the unit cell μ(Cu Kα)=0.945mm–1, and the diffraction experiment temperature T=100.00(10)K.
实施例5:包含不同化学修饰的siRNA的序列依赖性实验Example 5: Sequence-dependent experiments comprising siRNAs of different chemical modifications
已知GNA修饰具有siRNA序列依赖性,因此发明人在多条不同序列上测试了本公开的实验化合物。使用了靶向三个不同基因(ANGPTL3、HBV-S、HBV-X)mRNA的siRNA(序列如表4所示),使用实施例1的化合物(+)hmpNA(A)、(-)hmpNA(A)和作为对照的GNA
(A)化合物修饰AS链5’端第7位(序列如表5所示),再与母序列比较在靶活性和脱靶活性。
GNA modification is known to be siRNA sequence dependent, so the inventors tested the experimental compounds of the present disclosure on a number of different sequences. The siRNA (sequence shown in Table 4) targeting three different genes (ANGPTL3, HBV-S, HBV-X) mRNA was used, and the compound (+) hmpNA (A), (-) hmpNA ( A) and the GNA (A) compound as a control modify the 7th position of the 5' end of the AS chain (sequence is shown in Table 5), and compare the on-target activity and off-target activity with the parent sequence.
表4.靶向不同基因的siRNA序列Table 4. siRNA sequences targeting different genes
在上表中,大写字母G、A、C、U分别表示包含鸟嘌呤、腺嘌呤、胞嘧啶和尿嘧啶的核苷酸,小写字母m表示2'-甲氧基修饰,小写字母f表示2'-氟代修饰,小写字母s在中间时表示与该字母s左右相邻的两个核苷酸之间为硫代磷酸二酯基连接;小写字母s在3’端第一个时表示与该字母s左侧相邻的一个核苷酸末端为硫 代磷酸二酯基;以下同。In the above table, uppercase letters G, A, C, and U represent nucleotides containing guanine, adenine, cytosine, and uracil, respectively, lowercase letter m represents 2'-methoxy modification, and lowercase letter f represents 2 '-Fluoro modification, when the lowercase letter s is in the middle, it means that the two adjacent nucleotides to the left and right of the letter s are connected by a phosphorothioate group; when the lowercase letter s is the first at the 3' end, it means that the A nucleotide terminal adjacent to the left side of the letter s is a phosphorothioate group; the same below.
表5.靶向不同基因的包含化学修饰的siRNA序列Table 5. siRNA sequences containing chemical modifications targeting different genes
在靶活性实验结果参见表6,GNA
(A)显现出明显的序列依赖性,不同序列的在靶活性差异明显。本公开的实验化合物没有显示出明显的序列依赖性,普遍适用性更强。
See Table 6 for the results of on-target activity experiments. GNA (A) showed obvious sequence dependence, and the on-target activities of different sequences were significantly different. The experimental compounds of the present disclosure do not show obvious sequence dependence, and have stronger general applicability.
脱靶活性实验结果参见表7,可以看出,相对于母序列,本公开的实验化合物明显降低了dsRNA的脱靶活性。The off-target activity test results are shown in Table 7. It can be seen that compared with the parent sequence, the experimental compound of the present disclosure significantly reduces the off-target activity of dsRNA.
表6.针对不同靶序列的siRNA的在靶活性结果Table 6. On-target activity results of siRNAs against different target sequences
表7.针对不同靶序列的siRNA的脱靶活性结果Table 7. Off-target activity results of siRNAs against different target sequences
实施例6:制备NAG0052、L96Embodiment 6: preparation NAG0052, L96
化合物NAG0024、NAG0026购买自天津药明康德新药开发有限公司。除非特别说明,以下实施例中所用的试剂均为市售商品。Compounds NAG0024 and NAG0026 were purchased from Tianjin WuXi Kangde New Drug Development Co., Ltd. Unless otherwise specified, all reagents used in the following examples are commercially available.
(1)化合物NAG0052的合成(1) Synthesis of compound NAG0052
起始原料化合物1采购自江苏倍达医药科技有限公司。The starting material Compound 1 was purchased from Jiangsu Beida Pharmaceutical Technology Co., Ltd.
化合物NAG0052的具体合成步骤如下:The specific synthesis steps of compound NAG0052 are as follows:
化合物2Compound 2
在0度以及氮气保护下,往化合物1(12.3mL,101mmol)的THF(300mL)溶液中分批加入NaH(12.2g,304mmol,纯度60%)。该混合物在20度下搅拌1小时之后再次冷却到0度,接着往体系中逐滴加入苄溴(36.3mL,304mmol),并且在20度搅拌12小时。将该反应液用H
2O(100mL)淬灭后,用EtOAc(200mL x 2)萃取。合并后的有机相用饱和食盐水(100mL)洗涤,Na
2SO
4干燥,过滤,浓缩得到的残留物经过硅胶柱层析分离后得到目标化合物2(20.0g,51.8mmol,产率51%)。
To a solution of compound 1 (12.3 mL, 101 mmol) in THF (300 mL) was added portionwise NaH (12.2 g, 304 mmol, purity 60%) at 0°C under nitrogen protection. The mixture was stirred at 20°C for 1 hour and then cooled to 0°C again, then benzyl bromide (36.3 mL, 304 mmol) was added dropwise to the system and stirred at 20°C for 12 hours. The reaction solution was quenched with H 2 O (100 mL), and then extracted with EtOAc (200 mL x 2). The combined organic phases were washed with saturated brine (100mL), dried over Na 2 SO 4 , filtered, concentrated and the residue obtained was separated by silica gel column chromatography to obtain the target compound 2 (20.0 g, 51.8 mmol, yield 51%) .
LCMS:t
R=2.615and 2.820min in 30-90AB_7min_220&254_Shimadzu.lcm(Xtimate C18,3um,2.1*30mm),MS(ESI)m/z=351.2[M+Na]
+。
LCMS: t R =2.615 and 2.820min in 30-90AB_7min_220&254_Shimadzu.lcm (Xtimate C18, 3um, 2.1*30mm), MS (ESI) m/z = 351.2[M+Na] + .
1H NMR:(400MHz,CDCl
3)δppm 7.35-7.12(m,10H),5.06-4.95(m,1H),4.51-4.39(m,4H),4.24-3.87(m,2H),3.50-3.40(m,2H),3.38-3.20(m,3H),2.20-1.91 (m,2H)。
1 H NMR: (400MHz, CDCl 3 ) δppm 7.35-7.12 (m, 10H), 5.06-4.95 (m, 1H), 4.51-4.39 (m, 4H), 4.24-3.87 (m, 2H), 3.50-3.40 (m, 2H), 3.38-3.20 (m, 3H), 2.20-1.91 (m, 2H).
化合物3和4Compounds 3 and 4
在20度以及氮气保护下,往化合物2(13.0g,33.6mmol)的DCM(300mL)溶液中一次性加入TMSCN(13.5mL,101mmol),接着逐滴加入TMSOTf(9.14mL,50.5mmol)的DCM(30mL)溶液。该反应液在20度下搅拌15小时。反应结束之后用饱和NaHCO
3水溶液(80mL)淬灭该体系,并且用DCM(150mL x 2)萃取,合并后的有机相用饱和食盐水(80mL)洗涤,Na
2SO
4干燥,过滤以及浓缩后通过硅胶柱层析分离后得到目标化合物3(3.30g,9.18mmol,产率27%)以及淡黄色油状液体化合物4(8.50g,9.18mmol,产率70%)。
Under nitrogen protection at 20 degrees, TMSCN (13.5mL, 101mmol) was added to a solution of compound 2 (13.0g, 33.6mmol) in DCM (300mL) at one time, followed by dropwise addition of TMSOTf (9.14mL, 50.5mmol) in DCM (30 mL) solution. The reaction solution was stirred at 20°C for 15 hours. After the reaction was completed, the system was quenched with saturated NaHCO 3 aqueous solution (80 mL), and extracted with DCM (150 mL x 2), the combined organic phase was washed with saturated brine (80 mL), dried over Na 2 SO 4 , filtered and concentrated The target compound 3 (3.30 g, 9.18 mmol, yield 27%) and light yellow oily liquid compound 4 (8.50 g, 9.18 mmol, yield 70%) were obtained after separation by silica gel column chromatography.
化合物3Compound 3
1H NMR:(400MHz,CDCl
3)δppm 7.42-7.29(m,10H),4.81(t,J=7.8Hz,1H),4.65-4.49(m,4H),4.30-4.21(m,2H),3.65-3.57(m,1H),3.57-3.49(m,1H),2.49-2.40(m,2H)。
1 H NMR: (400MHz, CDCl 3 ) δppm 7.42-7.29(m, 10H), 4.81(t, J=7.8Hz, 1H), 4.65-4.49(m, 4H), 4.30-4.21(m, 2H), 3.65-3.57 (m, 1H), 3.57-3.49 (m, 1H), 2.49-2.40 (m, 2H).
化合物4Compound 4
1H NMR:(400MHz,CDCl
3)δppm 7.42-7.26(m,10H),4.93-4.87(m,1H),4.65-4.48(m,4H),4.43-4.38(m,1H),4.21-4.17(m,1H),3.79-3.70(m,1H),3.54(d,J=4.0Hz,1H),2.45-2.37(m,2H)。
1 H NMR: (400MHz, CDCl 3 ) δppm 7.42-7.26 (m, 10H), 4.93-4.87 (m, 1H), 4.65-4.48 (m, 4H), 4.43-4.38 (m, 1H), 4.21-4.17 (m, 1H), 3.79-3.70 (m, 1H), 3.54 (d, J=4.0Hz, 1H), 2.45-2.37 (m, 2H).
化合物5Compound 5
在0度及氮气保护下将化合物4(3.00g,9.28mmol)的THF(15mL)溶液,滴加到LiAlH
4(0.79g,20.9mmol)的THF(15mL)溶液中,滴加完后体系在0度反应1小时。TLC(PE:EtOAc=3:1)监测到原料完全消失。向反应液中缓慢加入十水硫酸钠,加至不冒泡为止。之后将反应液过滤,滤饼用二氯甲烷(60mL)洗涤三次后,收集滤液旋干,得目标化合物5(3.00g,产率90%).
The THF (15mL) solution of compound 4 (3.00g, 9.28mmol) was added dropwise to the THF (15mL) solution of LiAlH 4 (0.79g, 20.9mmol) at 0 degrees under the protection of nitrogen. After the dropwise addition, the system was in React at 0°C for 1 hour. TLC (PE:EtOAc=3:1) monitored the complete disappearance of starting material. Sodium sulfate decahydrate was slowly added to the reaction liquid until it stopped bubbling. Afterwards, the reaction solution was filtered, and the filter cake was washed three times with dichloromethane (60 mL), and the filtrate was collected and spin-dried to obtain the target compound 5 (3.00 g, yield 90%).
1H NMR:(400MHz,DMSO-d
6)δppm 7.40-7.14(m,10H),4.54-4.38(m,4H),4.06-3.99(m,2H),3.91(q,J=6.4Hz,1H),3.48-3.37(m,2H),2.67-2.52(m,2H),2.21-2.18(m,1H),1.77-1.73(m,1H)。
1 H NMR: (400MHz,DMSO-d 6 )δppm 7.40-7.14(m,10H),4.54-4.38(m,4H),4.06-3.99(m,2H),3.91(q,J=6.4Hz,1H ), 3.48-3.37(m,2H), 2.67-2.52(m,2H), 2.21-2.18(m,1H), 1.77-1.73(m,1H).
化合物6Compound 6
在氮气保护下,将化合物5(3.00g,8.25mmol)溶于DCM(30mL),加入TEA(3.44mL,24.7mmol)和CbzCl(1.76mL,12.4mmol),20度反应2小时。LCMS显示反应完成。将反应液加入二氯甲烷(30mL)和水(60mL)萃取。有机相用水(60mL x 3)洗涤三次,无水硫酸钠干燥,浓缩用正向柱纯化(PE:EtOAc=1:1),得到目标化合物6(2.5g,产率90%)。Under nitrogen protection, compound 5 (3.00g, 8.25mmol) was dissolved in DCM (30mL), TEA (3.44mL, 24.7mmol) and CbzCl (1.76mL, 12.4mmol) were added, and reacted at 20°C for 2 hours. LCMS showed the reaction was complete. The reaction solution was added to dichloromethane (30 mL) and water (60 mL) for extraction. The organic phase was washed three times with water (60mL x 3), dried over anhydrous sodium sulfate, concentrated and purified by forward column (PE:EtOAc=1:1) to obtain the target compound 6 (2.5g, yield 90%).
LCMS:t
R=0.810min in 5-95AB_1min,MS(ESI)m/z=462.2[M+H]
+。
LCMS: t R = 0.810 min in 5-95AB_1 min, MS (ESI) m/z = 462.2 [M+H] + .
1H NMR:(400MHz,CDCl
3)δppm 7.39-7.29(m,15H),5.35(s,1H),5.15-5.01(m,2H),4.72(d,J=6.0Hz,1H),4.54-4.40(m,3H),4.26(s,1H),4.23-4.18(m,1H),4.11-4.04(m,1H),3.54-3.41(m,3H),3.37-3.25(m,1H),2.34-2.23(m,1H),1.85-1.79(m,1H)。
1 H NMR: (400MHz, CDCl 3 )δppm 7.39-7.29(m,15H),5.35(s,1H),5.15-5.01(m,2H),4.72(d,J=6.0Hz,1H),4.54- 4.40(m,3H),4.26(s,1H),4.23-4.18(m,1H),4.11-4.04(m,1H),3.54-3.41(m,3H),3.37-3.25(m,1H), 2.34-2.23 (m, 1H), 1.85-1.79 (m, 1H).
化合物7Compound 7
在氮气保护下,将化合物6(2.00g,3.90mmol)溶于DCM(5mL),在-78度下加入BCl
3的THF溶液(1M,27.3mL),反应1小时。TLC(DCM:MeOH=10:1)监测到原料完全消失。将反应液在-78度下加入甲醇(20mL)淬灭,浓缩,用正向柱纯化(DCM:MeOH=10:1),得到目标化合物7(2.00g,产率60%)。
Under nitrogen protection, compound 6 (2.00 g, 3.90 mmol) was dissolved in DCM (5 mL), and BCl 3 in THF (1 M, 27.3 mL) was added at -78°C for 1 hour. TLC (DCM:MeOH=10:1) monitored the complete disappearance of starting material. The reaction solution was quenched by adding methanol (20 mL) at -78°C, concentrated, and purified by a forward column (DCM:MeOH=10:1) to obtain the target compound 7 (2.00 g, yield 60%).
1H NMR:(400MHz,CD
3OD)δppm 7.41-7.23(m,5H),5.08(s,2H),4.25-4.07(m,2H),3.85-3.75(m,1H),3.63-3.56(m,1H),3.54-3.48(m,1H),3.30-3.27(m,2H),2.34-2.21(m,1H),1.71-1.64(m,1H)。
1 H NMR: (400MHz, CD 3 OD) δppm 7.41-7.23 (m, 5H), 5.08 (s, 2H), 4.25-4.07 (m, 2H), 3.85-3.75 (m, 1H), 3.63-3.56 ( m, 1H), 3.54-3.48(m, 1H), 3.30-3.27(m, 2H), 2.34-2.21(m, 1H), 1.71-1.64(m, 1H).
化合物8Compound 8
在氮气保护下,将化合物7(0.50g,1.78mmol)溶于吡啶(5mL)中,在0度下加入4A分子筛(500mg)和DMTrCl(0.66mL,2.13mmol),之后升温至20度反应1.5小时。TLC(PE:EtOAc=2:1)监测到原料完全消失。将反应液加入乙酸乙酯(60mL)和水(60mL)萃取,有机相用水(60mL x 3)洗涤三次后用无水硫酸钠干燥,浓缩,用正向柱纯化(PE:EtOAc=1:1),得到目标化合物8(800mg,产率90%)。Under the protection of nitrogen, compound 7 (0.50g, 1.78mmol) was dissolved in pyridine (5mL), 4A molecular sieves (500mg) and DMTrCl (0.66mL, 2.13mmol) were added at 0 degrees, and then the temperature was raised to 20 degrees to react 1.5 Hour. TLC (PE:EtOAc=2:1) monitored the complete disappearance of starting material. The reaction solution was extracted by adding ethyl acetate (60mL) and water (60mL), the organic phase was washed three times with water (60mL x 3), dried over anhydrous sodium sulfate, concentrated, and purified by a forward column (PE:EtOAc=1:1 ), to obtain the target compound 8 (800mg, yield 90%).
1H NMR:(400MHz,CDCl
3)δppm 7.44(d,J=7.6Hz,2H),7.37-7.23(m,11H),7.22-7.15(m,1H),6.84(d,J=8.8Hz,4H),5.09(s,2H),4.31-4.17(m,2H),4.02-3.91(m,1H),3.84-3.73(m,6H),3.33(s,1H),3.28(s,1H),3.19-3.01(m,2H),2.34-2.25(m,1H),1.70-1.62(m,1H)。
1 H NMR: (400MHz, CDCl 3 ) δppm 7.44(d, J=7.6Hz, 2H), 7.37-7.23(m, 11H), 7.22-7.15(m, 1H), 6.84(d, J=8.8Hz, 4H),5.09(s,2H),4.31-4.17(m,2H),4.02-3.91(m,1H),3.84-3.73(m,6H),3.33(s,1H),3.28(s,1H) ,3.19-3.01(m,2H),2.34-2.25(m,1H),1.70-1.62(m,1H).
化合物9Compound 9
将化合物8(800mg,1.234mmol)溶于EtOAc(5mL),加入Pd/C 10%(800mg,7.517mmol),反应在H
2条件(15Psi),20度下反应1小时。LCMS显示反应已经完成。反应液过滤,滤饼用二氯甲烷(100mL)和甲醇(100mL)洗涤三次,浓缩,经过反相柱分离得到化合物9(300mg,54%)。
Compound 8 (800mg, 1.234mmol) was dissolved in EtOAc (5mL), Pd/C 10% (800mg, 7.517mmol) was added, and the reaction was carried out under H 2 condition (15Psi) at 20°C for 1 hour. LCMS showed the reaction was complete. The reaction solution was filtered, and the filter cake was washed three times with dichloromethane (100 mL) and methanol (100 mL), concentrated, and separated by a reverse-phase column to obtain compound 9 (300 mg, 54%).
LCMS:t
R=2.586min in 10-80CD_3min MS(ESI)m/z=450.2[M+H]
+。
LCMS: t R = 2.586 min in 10-80 CD_3 min MS (ESI) m/z = 450.2 [M+H] + .
化合物11Compound 11
将化合物10(435mg,1.780mmol)溶于DCM(10mL),加入DIEA(0.441mL,2.67mmol)和HATU(677mg,1.78mmol)后,再加入化合物9(400mg,0.890mmol),20度反应1小时。TLC(DCM:MeOH=10:1)监测反应完成。将反应液加入二氯甲烷(60mL)和水(60mL)萃取,有机相用水(60mL x 3)洗涤三次,无水硫酸钠干燥,浓缩用正向柱纯化(PE:EtOAc=0:1过柱,在100%处出产品峰),得到目标化合物11(600mg,产率90%)。Dissolve compound 10 (435mg, 1.780mmol) in DCM (10mL), add DIEA (0.441mL, 2.67mmol) and HATU (677mg, 1.78mmol), then add compound 9 (400mg, 0.890mmol), and react at 20 degrees 1 Hour. TLC (DCM:MeOH=10:1) monitored the completion of the reaction. The reaction solution was extracted by adding dichloromethane (60mL) and water (60mL), the organic phase was washed three times with water (60mL x 3), dried over anhydrous sodium sulfate, concentrated and purified by forward column (PE:EtOAc=0:1) , The product peak appeared at 100%) to obtain the target compound 11 (600 mg, yield 90%).
LCMS:t
R=2.745min in 30-90CD_3min,MS(ESI)m/z=698.4[M+Na]
+。
LCMS: t R = 2.745 min in 30-90 CD_3 min, MS (ESI) m/z = 698.4 [M+Na] + .
1H NMR:(400MHz,CD
3OD)δppm 7.46-7.38(m,2H),7.35-7.24(m,6H),7.22-7.16(m,1H),6.90-6.78(m,4H),4.29-4.21(m,2H),4.02-3.95(m,1H),3.77(s,6H),3.66-3.62(m,3H),3.41(s,1H),3.18-3.04(m,2H),2.36-2.17(m,5H),1.71-1.50(m,5H),1.39-1.25(m,14H)。
1 H NMR: (400MHz,CD 3 OD)δppm 7.46-7.38(m,2H),7.35-7.24(m,6H),7.22-7.16(m,1H),6.90-6.78(m,4H),4.29- 4.21(m,2H),4.02-3.95(m,1H),3.77(s,6H),3.66-3.62(m,3H),3.41(s,1H),3.18-3.04(m,2H),2.36- 2.17 (m, 5H), 1.71-1.50 (m, 5H), 1.39-1.25 (m, 14H).
化合物12Compound 12
将化合物11(600mg,0.799mmol)溶于THF(3mL)和H
2O(1mL),加入LiOH.H
2O(134mg,3.20mmol),20度反应12小时。TLC(DCM:MeOH=10:1)显示反应完成。将反应液旋干,用水(5mL)和甲醇(5mL)溶解,用反向柱纯化(H
2O:CH
3CN=1:1,在35%左右出峰),得到目标化合物12(460mg,产率100%,锂盐)。
Compound 11 (600 mg, 0.799 mmol) was dissolved in THF (3 mL) and H 2 O (1 mL), LiOH.H 2 O (134 mg, 3.20 mmol) was added, and reacted at 20°C for 12 hours. TLC (DCM:MeOH=10:1) showed that the reaction was complete. The reaction solution was spin-dried, dissolved in water (5mL) and methanol (5mL), and purified by reverse column (H 2 O:CH 3 CN=1:1, peak at about 35%) to obtain the target compound 12 (460mg, Yield 100%, lithium salt).
LCMS:t
R=1.346min in 10-80CD_3min,MS(ESI)m/z=684.3[M+Na]
+。
LCMS: t R = 1.346 min in 10-80 CD_3 min, MS (ESI) m/z = 684.3 [M+Na] + .
HPLC:t
R=1.879min in 10-80CD_6min。
HPLC: tR = 1.879min in 10-80CD_6min.
1H NMR:(400MHz,CD
3OD)δppm 7.47-7.39(m,2H),7.35-7.24(m,6H),7.22-7.15(m,1H),6.91-6.79(m,4H),4.31-4.18(m,2H),4.02-3.95(m,1H),3.78(s,6H),3.44-3.33(m,2H),3.18-3.04(m,2H),2.35-2.27(m,1H),2.24-2.10(m,4H),1.70-1.51(m,5H),1.31-1.23(m,12H)。
1 H NMR: (400MHz, CD 3 OD) δppm 7.47-7.39 (m, 2H), 7.35-7.24 (m, 6H), 7.22-7.15 (m, 1H), 6.91-6.79 (m, 4H), 4.31- 4.18(m,2H),4.02-3.95(m,1H),3.78(s,6H),3.44-3.33(m,2H),3.18-3.04(m,2H),2.35-2.27(m,1H), 2.24-2.10 (m, 4H), 1.70-1.51 (m, 5H), 1.31-1.23 (m, 12H).
化合物13Compound 13
室温环境,氮气保护下,将化合物NAG0024(271mg,0.151mmol)溶解于无水THF(2mL)和无水DMF(4mL),加入3A分子筛,再依次加入化合物12(100mg,0.151mmol),HOBt(25mg,0.181mmol),DCC(38mg,0.181mmol)和DIEA(39mg,0.302mmol)。反应液45度反应16h.LC-MS显示反应完全后,加水淬灭,过滤。滤液浓缩后,经C18反相柱纯化(H
2O/MeCN),得到化合物13(210mg,产率57%)。
At room temperature, under the protection of nitrogen, the compound NAG0024 (271 mg, 0.151 mmol) was dissolved in anhydrous THF (2 mL) and anhydrous DMF (4 mL), and 3A molecular sieves were added, followed by addition of compound 12 (100 mg, 0.151 mmol), HOBt ( 25mg, 0.181mmol), DCC (38mg, 0.181mmol) and DIEA (39mg, 0.302mmol). The reaction solution was reacted at 45°C for 16h. After LC-MS showed that the reaction was complete, it was quenched with water and filtered. After the filtrate was concentrated, it was purified by C18 reverse phase column (H 2 O/MeCN) to obtain compound 13 (210 mg, yield 57%).
化合物NAG0052Compound NAG0052
室温环境下,化合物13(230mg,0.094mmol)溶于吡啶(5mL),加入分子筛,加入DMAP(12mg,0.283mmol),丁二酸酐(28mg,0.283mmol)。氮气保护,50度搅拌16小时。LCMS检测反应完全,过滤旋干。过C18反相柱纯化后,由制备HPLC二次纯化,得到目标化合物NAG0052(123mg,0.048mmol,产率51%)。At room temperature, compound 13 (230 mg, 0.094 mmol) was dissolved in pyridine (5 mL), molecular sieves were added, DMAP (12 mg, 0.283 mmol) and succinic anhydride (28 mg, 0.283 mmol) were added. Under nitrogen protection, stir at 50°C for 16 hours. LCMS detected that the reaction was complete, filtered and spin-dried. After purification by C18 reverse-phase column, secondary purification by preparative HPLC gave the target compound NAG0052 (123 mg, 0.048 mmol, yield 51%).
MS(ESI)m/z=2535.3[M-1]
-.理论:2536.2。
MS (ESI) m/z = 2535.3 [M-1] - . Theory: 2536.2.
1H NMR(400MHz,Acetonitrile-d
3)δ7.48-7.43(m,2H),7.37-7.12(m,11H),7.00-6.85(m,10H),6.66(s,1H),5.31(dd,J=3.4,1.1Hz,3H),5.20-5.13(m,1H),5.05(dd,J=11.3,3.4Hz,3H),4.56(d,J=8.5Hz,3H),4.30(dd,J=7.7,5.3Hz,1H),4.18-3.93(m,14H),3.79(s,10H),3.65(q,J=4.7,3.6Hz,13H),3.56-3.07(m,24H),2.56(s,6H),2.37(t,J=5.8Hz,10H),2.17(t,J=7.5Hz,9H),2.02-1.96(m,20H),1.88(s,8H),1.82-1.73(m,2H),1.60(dt,J=15.0,7.3Hz,16H),1.27(s,13H)。
1 H NMR (400MHz,Acetonitrile-d 3 )δ7.48-7.43(m,2H),7.37-7.12(m,11H),7.00-6.85(m,10H),6.66(s,1H),5.31(dd ,J=3.4,1.1Hz,3H),5.20-5.13(m,1H),5.05(dd,J=11.3,3.4Hz,3H),4.56(d,J=8.5Hz,3H),4.30(dd, J=7.7,5.3Hz,1H),4.18-3.93(m,14H),3.79(s,10H),3.65(q,J=4.7,3.6Hz,13H),3.56-3.07(m,24H),2.56 (s,6H),2.37(t,J=5.8Hz,10H),2.17(t,J=7.5Hz,9H),2.02-1.96(m,20H),1.88(s,8H),1.82-1.73( m, 2H), 1.60 (dt, J = 15.0, 7.3 Hz, 16H), 1.27 (s, 13H).
(2)L96的合成(2) Synthesis of L96
具有如上所示结构式的化合物L96按照专利申请WO2014025805A1记载的方法制备获得。Compound L96 having the above structural formula was prepared according to the method described in patent application WO2014025805A1.
实施例7:dsRNA的合成Example 7: Synthesis of dsRNA
1.自制带有载体的树脂1. Self-made resin with carrier
将含有羧酸基团的化合物NAG0052(157mg,0.062mmol)溶于无水DMF(3mL),待底物完全溶解后,依次加入无水乙腈(4mL),DIEA(0.03mL,0.154mmol,2.5eq)和HBTU(35mg,0.093mmol,1.5eq)。反应液混合均匀后,再加入大孔胺甲基树脂(476mg,空白载量为0.41mmol/g,目标载量为0.1mmol/g)。将反应液放入摇床上(温度:25℃,转速:200rpm)振摇过夜。反应液过滤,滤饼依次分别用DCM,无水乙腈洗涤,收集固体,真空干燥过夜。The compound NAG0052 (157mg, 0.062mmol) containing a carboxylic acid group was dissolved in anhydrous DMF (3mL). After the substrate was completely dissolved, anhydrous acetonitrile (4mL), DIEA (0.03mL, 0.154mmol, 2.5eq ) and HBTU (35mg, 0.093mmol, 1.5eq). After the reaction solution was mixed evenly, macroporous amine methyl resin (476mg, blank load was 0.41mmol/g, target load was 0.1mmol/g) was added. The reaction solution was placed on a shaker (temperature: 25° C., rotation speed: 200 rpm) and shaken overnight. The reaction liquid was filtered, and the filter cake was washed successively with DCM and anhydrous acetonitrile, and the solid was collected and dried overnight in vacuum.
将上步固体分散于无水乙腈(5mL),依次加入吡啶(0.18mL),DMAP(3mg),NMI(0.12mL)和CapB1(2.68mL)。将反应液放入摇床上(温度:25℃,转速:200rpm)振摇2h。反应液过滤,滤饼用无水乙腈洗涤,收集固体,真空干燥过夜,得到带有载体的树脂。载量经过测定为0.1mmol/g。The above solid was dispersed in anhydrous acetonitrile (5 mL), and pyridine (0.18 mL), DMAP (3 mg), NMI (0.12 mL) and CapB1 (2.68 mL) were added sequentially. The reaction solution was placed on a shaker (temperature: 25° C., rotation speed: 200 rpm) and shaken for 2 h. The reaction liquid was filtered, and the filter cake was washed with anhydrous acetonitrile, and the solid was collected and vacuum-dried overnight to obtain a resin with a carrier. The loading capacity was determined to be 0.1 mmol/g.
2.对于已经连接在树脂上的NAG0052,使用该树脂作为起始,按照核苷酸排布顺序自3’-5’方向逐一连接核苷单体。每连接一个核苷单体都包括脱保护、偶联、盖帽、氧化或硫化四步反应。操作为本领域常规。2. For the NAG0052 that has been connected to the resin, use the resin as a starting point, and connect the nucleoside monomers one by one from the 3'-5' direction according to the sequence of nucleotide arrangement. Each connection of a nucleoside monomer includes four steps of deprotection, coupling, capping, oxidation or sulfurization. The operation is conventional in the art.
化合物NAG0052经过固相合成连接到序列上,再经过胺解后,NAG0052结构脱去一部分官能团成为NAG0052’。The compound NAG0052 is connected to the sequence through solid-phase synthesis, and after aminolysis, the structure of NAG0052 loses some functional groups to become NAG0052'.
制得的dsRNA具有表8和表9中所示的有义链和反义链。The prepared dsRNA had the sense and antisense strands shown in Table 8 and Table 9.
表8.dsRNA列表Table 8. dsRNA list
dsRNA编号dsRNA ID | 有义链编号Sense strand number | 反义链编号Antisense strand number |
TRD002218TRD002218 | TJR4373-SSTJR4373-SS | TJR0414-ASTJR0414-AS |
TRD007205TRD007205 | TJR013485STJR013485S | TJR0414-ASTJR0414-AS |
表9.有义链和反义链的核酸序列Table 9. Nucleic acid sequences of sense strand and antisense strand
表10.dsRNA的结构:Table 10. Structure of dsRNA:
其中,缀合物TRD002218作为参比阳性化合物,Z表示siRNA。Among them, the conjugate TRD002218 is used as a reference positive compound, and Z represents siRNA.
实施例8:dsRNA在体内对靶基因mRNA表达量的抑制Example 8: Inhibition of dsRNA on target gene mRNA expression in vivo
本实验考察本公开的缀合不同结构的dsRNA在体内对靶基因mRNA表达量的抑制效率This experiment investigates the inhibitory efficiency of the disclosed dsRNA conjugated with different structures on the expression of target gene mRNA in vivo
将雄性6-8周龄C57BL/6小鼠随机分组,每组共6只,每个时间点各3只,分别向每组小鼠给予TRD007205、参比阳性TRD002218以及PBS。Male 6-8 week-old C57BL/6 mice were randomly divided into 6 groups, 3 at each time point, and each group was given TRD007205, reference positive TRD002218 and PBS.
所有动物依据体总计算给药量,采用皮下注射方式单次给药,dsRNA给药剂量(以siRNA的量计)为1mg/kg,给药体积为5mL/kg。给药7天、28天后处死小鼠,收集肝脏,用RNA later(Sigma Aldrich公司)保存;随后用组织匀浆仪匀浆肝组织,再用组织RNA提取试剂盒(凡知医疗科技,FG0412)根据操作说明书标注的操作步骤提取得到肝组织总RNA。将总RNA反转录成cDNA并采用实时荧光定量PCR方法检测肝组织中的TTR mRNA的表达量。在该荧光定量PCR 法中,以甘油醛3-磷酸脫氫酶(GAPDH)基因作为内参基因,使用针对TTR和GAPDH的Taqman探针引物分别检测TTR和GAPDH的mRNA表达量。All animals were dosed according to their total body weight, and were administered once by subcutaneous injection. The dose of dsRNA (based on the amount of siRNA) was 1 mg/kg, and the volume of administration was 5 mL/kg. After 7 days and 28 days of administration, the mice were sacrificed, the liver was collected, and preserved with RNA later (Sigma Aldrich); then the liver tissue was homogenized with a tissue homogenizer, and then the tissue RNA extraction kit (Fanzhi Medical Technology, FG0412) was used The total RNA of the liver tissue was extracted according to the operation steps marked in the operation manual. The total RNA was reverse-transcribed into cDNA, and the expression of TTR mRNA in liver tissue was detected by real-time fluorescent quantitative PCR method. In the fluorescent quantitative PCR method, glyceraldehyde 3-phosphate dehydrogenase (GAPDH) gene was used as an internal reference gene, and Taqman probe primers for TTR and GAPDH were used to detect the mRNA expression levels of TTR and GAPDH, respectively.
表11.小鼠体内实验化合物分组信息:Table 11. Grouping information of experimental compounds in mice:
表12.检测引物的序列参见如下:Table 12. The sequences of the detection primers are as follows:
TTR mRNA表达量按照如下等式计算:TTR mRNA expression was calculated according to the following equation:
TTR mRNA表达量=【(测试组TTR mRNA表达量/测试组GAPDH mRNA表达量)/(对照组TTR mRNA表达量/对照组GAPDH mRNA表达量)】x 100%。TTR mRNA expression=[(TTR mRNA expression of test group/GAPDH mRNA expression of test group)/(TTR mRNA expression of control group/GAPDH mRNA expression of control group)]×100%.
给药7天、28天后,本公开的缀合不同结构的dsRNA的在体内对靶基因mRNA表达量的抑制效率分别见图1和图2。由图1的结果可知,缀合物TRD007205在给药后7天对于TTR mRNA的表达抑制均具有良好的效果。由图2可知,给药28天后,TRD007205对靶基因mRNA表达量的抑制作用优于TRD002218。After 7 days and 28 days of administration, the in vivo inhibition efficiencies of dsRNA conjugated with different structures of the present disclosure on target gene mRNA expression are shown in Figure 1 and Figure 2, respectively. It can be seen from the results in Figure 1 that the conjugate TRD007205 has a good effect on the expression inhibition of TTR mRNA 7 days after administration. It can be seen from Figure 2 that after 28 days of administration, TRD007205 has a better inhibitory effect on target gene mRNA expression than TRD002218.
实施例9:合成dsRNAExample 9: Synthetic dsRNA
1.自制带有载体的树脂1. Self-made resin with carrier
具体操作同实施例7。Concrete operation is the same as embodiment 7.
2.使用带有NAG0052的树脂作为起始,按照核苷酸排布顺序自3’-5’方向逐一连接核苷单体。每连接一个核苷单体都包括脱保护、偶联、盖帽、氧化或硫化四步反应。具体参照实施例2的合成方法。2. Use the resin with NAG0052 as the starting point, and connect the nucleoside monomers one by one from the 3'-5' direction according to the sequence of nucleotide arrangement. Each connection of a nucleoside monomer includes four steps of deprotection, coupling, capping, oxidation or sulfurization. Specifically refer to the synthetic method of embodiment 2.
制得的dsRNA具有表13和表14中所示的有义链和反义链。表15是dsRNA 对应的裸序列。表16中为阳性对照化合物。The prepared dsRNA had the sense and antisense strands shown in Table 13 and Table 14. Table 15 is the naked sequence corresponding to the dsRNA. In Table 16 are positive control compounds.
表13.dsRNA列表Table 13. dsRNA list
表14.dsRNA的有义链和反义链Table 14. Sense and antisense strands of dsRNA
其中,in,
(‐)hmpNA(A)为实施例1.1节中核苷亚磷酰胺单体1‐1a通过固相合成获得;(+)hmpNA(A)为旋光异构体;(-)hmpNA(A) is obtained by solid-phase synthesis of nucleoside phosphoramidite monomer 1-1a in Section 1.1 of Example; (+)hmpNA(A) is an optical isomer;
(‐)hmpNA(G)为实施例1.6节中核苷亚磷酰胺单体1‐6a通过固相合成获得;(+)hmpNA(G)为旋光异构体;(‐)hmpNA(G) is obtained by solid-phase synthesis of nucleoside phosphoramidite monomer 1‐6a in Section 1.6 of Example; (+)hmpNA(G) is an optical isomer;
(‐)hmpNA(U)为实施例1.7节中核苷亚磷酰胺单体1‐7a通过固相合成获得;(+)hmpNA(U)为旋光异构体。(‐)hmpNA(U) is obtained by solid-phase synthesis of nucleoside phosphoramidite monomer 1‐7a in Section 1.7 of Example; (+)hmpNA(U) is an optical isomer.
NAG0052’的结构为:The structure of NAG0052' is:
表15.dsRNA的有义链和反义链对应的裸序列The naked sequence corresponding to the sense strand and antisense strand of table 15.dsRNA
表16.阳性对照化合物序列信息Table 16. Positive Control Compound Sequence Information
TRD006597参照WO2020061177A1制备获得;TRD006597 was prepared with reference to WO2020061177A1;
NAG37和IB的结构分别如下所示:The structures of NAG37 and IB are shown below, respectively:
在HEK293A细胞中采用11个浓度梯度对dsRNA进行体外分子水平模拟在靶活性筛选。In HEK293A cells, 11 concentration gradients were used to screen dsRNAs for in vitro molecular simulation on-target activity.
以人HSD17B13基因构建siRNA对应的在靶序列,插入到psiCHECK-2质粒中。该质粒包含海肾荧光素酶基因及萤火虫荧光素酶基因。作为双报告基因系统,dsRNA的靶序列插入到海肾荧光素酶基因的3’UTR区域,dsRNA对于靶标序列的活性可以通过经萤火虫荧光素酶校准后的海肾荧光素酶表达情况的检测来反映,检测使用Dual-Luciferase Reporter Assay System(Promega,E2940)。Human HSD17B13 gene was used to construct the corresponding target sequence of siRNA and inserted into psiCHECK-2 plasmid. The plasmid contains Renilla luciferase gene and Firefly luciferase gene. As a dual reporter gene system, the target sequence of dsRNA is inserted into the 3'UTR region of the Renilla luciferase gene, and the activity of dsRNA on the target sequence can be detected by the detection of the expression of Renilla luciferase calibrated by firefly luciferase For reflection, Dual-Luciferase Reporter Assay System (Promega, E2940) was used for detection.
HEK293A细胞培养于含10%胎牛血清的DMEM高糖培养基中,在37℃,5%CO
2条件下培养。转染前24h,将HEK293A细胞接种于96孔板,接种密度为每孔8×10
3个细胞,每孔100μL培养基。
HEK293A cells were cultured in DMEM high-glucose medium containing 10% fetal bovine serum at 37°C and 5% CO 2 . 24 hours before transfection, HEK293A cells were seeded in a 96-well plate at a seeding density of 8× 10 cells per well and 100 μL of medium per well.
按照说明书,使用Lipofectamine2000(ThermoFisher,11668019)对细胞共转染dsRNA及对应质粒,Lipofectamine2000每孔使用0.2μL,质粒转染量为20ng每孔。对于在靶序列质粒,dsRNA共设置11个浓度点,最高浓度点终浓度为20nM,3倍梯度稀释,20nM,6.6667nM,2.2222nM,0.7407nM,0.2469nM,0.0823nM,0.0274nM,0.0091nM,0.0030nM,0.0010nM和0.0003nM。转染后24h,采用Dual-Luciferase Reporter Assay System(Promega,E2940)检测在靶水平。检测序列的在靶活性如表17所示。According to the instructions, cells were co-transfected with dsRNA and corresponding plasmids using Lipofectamine2000 (ThermoFisher, 11668019). Lipofectamine2000 was used in 0.2 μL per well, and the amount of plasmid transfection was 20 ng per well. For the target sequence plasmid, dsRNA has a total of 11 concentration points, the final concentration of the highest concentration point is 20nM, 3-fold serial dilution, 20nM, 6.6667nM, 2.2222nM, 0.7407nM, 0.2469nM, 0.0823nM, 0.0274nM, 0.0091nM, 0.0030nM, 0.0010nM and 0.0003nM. 24h after transfection, the target level was detected by Dual-Luciferase Reporter Assay System (Promega, E2940). The on-target activities of the detected sequences are shown in Table 17.
表17.dsRNA的psi-CHECK在靶活性筛选结果Table 17. psi-CHECK screening results for target activity of dsRNA
N/A表示不适用N/A means not applicable
以上结果表明,参比TRD006597和TJR100347,化合物TRD008007、TRD008008、TRD008009、TRD008010、TRD008010-1在psiCHECK系统针对HSD17B13基因具有更高水平的在靶抑制活性。The above results indicated that, compared with TRD006597 and TJR100347, compounds TRD008007, TRD008008, TRD008009, TRD008010, and TRD008010-1 had a higher level of on-target inhibitory activity against the HSD17B13 gene in the psiCHECK system.
实施例10:dsRNA对人原代肝细胞(PHH)中人HSD17B13的抑制-7个浓度点抑制活性Example 10: Inhibition of dsRNA on human HSD17B13 in primary human hepatocytes (PHH) - inhibition activity at 7 concentration points
在人原代肝细胞(PHH)中采用7个浓度梯度对dsRNA进行PHH活性筛选。各个dsRNA样品转染起始终浓度为20nM,5倍梯度稀释和7个浓度点。The dsRNA was screened for PHH activity in primary human hepatocytes (PHH) using 7 concentration gradients. Each dsRNA sample was transfected with a constant concentration of 20 nM, 5-fold serial dilution and 7 concentration points.
PHH细胞(Novabiosis,nHPHepatocytes)冻存于液氮中,转染前24h,将PHH细胞复苏后接种于96孔板,接种密度为每孔3×10
4个细胞,每孔80μL培养基。
PHH cells (Novabiosis, nHP Hepatocytes) were cryopreserved in liquid nitrogen. 24 hours before transfection, the PHH cells were resuscitated and seeded in 96-well plates at a seeding density of 3×10 4 cells per well and 80 μL of medium per well.
参照产品说明手册,使用Lipofectamine RNAi MAX(ThermoFisher,13778150)转染dsRNA,dsRNA转染的梯度终浓度为10nM,2nM,0.4nM,0.08nM,0.016nM,0.0032nM和0.00064nM。在处理24小时后,使用高通量细胞RNA提取试剂盒(凡知,FG0417)进行细胞总RNA提取、RNA逆转录实验(Takara,6210B)和定量实时PCR检测(ThermoFisher,4444557),测定人HSD17B13的mRNA水平,根据GAPDH内参基因水平对人HSD17B13的mRNA水平进行校正。Referring to the product instruction manual, use Lipofectamine RNAi MAX (ThermoFisher, 13778150) to transfect dsRNA, and the gradient final concentration of dsRNA transfection is 10nM, 2nM, 0.4nM, 0.08nM, 0.016nM, 0.0032nM and 0.00064nM. After 24 hours of treatment, use the high-throughput cell RNA extraction kit (Fanzhi, FG0417) to perform total cellular RNA extraction, RNA reverse transcription experiment (Takara, 6210B) and quantitative real-time PCR detection (ThermoFisher, 4444557) to determine human HSD17B13 The mRNA level of human HSD17B13 was corrected according to the level of GAPDH internal reference gene.
其中,在定量实时PCR检测时,采用的是探针Q-PCR检测实验,其引物信息如表18所示。Among them, in the quantitative real-time PCR detection, the probe Q-PCR detection experiment is used, and the primer information is shown in Table 18.
表18.Taqman引物信息表Table 18. Taqman primer information table
引物名称Primer name | SEQ ID NOSEQ ID NO | 引物序列Primer sequence |
hGAPDH-PF1-MGBhGAPDH-PF1-MGB | 5353 | GACCCCTTCATTGACCTCAACTACGACCCTTCATTGACCTCAACTAC |
hGAPDH-PR1-MGBhGAPDH-PR1-MGB | 5454 | TTGACGGTGCCATGGAATTTTTGACGGTGCCATGGAATTT |
hGAPDH-P1-MGBhGAPDH-P1-MGB | 5555 | TTACATGTTCCAATATGATTCCTTACATGTTCCAATATGATTCC |
表19.HSD探针引物信息如下:Table 19. HSD probe primer information is as follows:
引物名称Primer name | 品牌brand | 货号Item No. |
HSD17B13Human probeHSD17B13 Human probe | ThermoThermo | Hs01068199_mlHs01068199_ml |
结果分析方法Results analysis method
Q-PCR检测实验完毕后,按照系统自动设定的阈值获取相应的Ct值,可以通过Ct值比较,相对定量某个基因的表达:比较Ct指的是通过与内参基因Ct值之间的差值来计算基因表达差异,也称之是2
-△△Ct,△△Ct=[(Ct实验组目的基因-Ct实验组内参)-(Ct对照组目的基因-Ct对照组内参)]。抑制率(%)=(1-目的基因表达剩余量)*100%。
After the Q-PCR detection experiment is completed, the corresponding Ct value can be obtained according to the threshold automatically set by the system, and the expression of a certain gene can be relatively quantified by comparing the Ct value: the comparison Ct refers to the difference between the Ct value and the internal reference gene Ct value ΔΔCt =[(target gene of Ct experimental group-internal reference of Ct experimental group)-(target gene of Ct control group-internal reference of Ct control group)]. Inhibition rate (%)=(1-remaining amount of target gene expression)*100%.
结果以相对于经过对照dsRNA处理的细胞的人HSD17B13mRNA表达剩余百分比来表示。抑制率的IC
50结果见表20。
Results are expressed as percent remaining human HSD17B13 mRNA expression relative to control dsRNA-treated cells. See Table 20 for the IC50 results of the inhibition rate.
结果表明,参比对照化合物TRD006597,化合物TRD008007、TRD008008、TRD008009、TRD008010在PHH细胞对HSD17B13基因具有高水平的在靶抑制活性。The results showed that the reference compound TRD006597, compounds TRD008007, TRD008008, TRD008009, and TRD008010 had a high level of on-target inhibitory activity on the HSD17B13 gene in PHH cells.
表20.dsRNA在PHH细胞中多剂量抑制活性Table 20.dsRNA multi-dose inhibitory activity in PHH cells
实施例11.dsRNA对人原代肝细胞(PHH)中人HSD17B13的抑制‐多浓度点抑制活性Example 11. Inhibition of human HSD17B13 by dsRNA in primary human hepatocytes (PHH) - multi-concentration point inhibitory activity
合成表21中dsRNA,在人原代肝细胞(PHH)中采用多浓度梯度对dsRNA进行人原代肝细胞(PHH)活性筛选。The dsRNA in Table 21 was synthesized, and the dsRNA was screened for primary human hepatocytes (PHH) activity in primary human hepatocytes (PHH) using multiple concentration gradients.
表21.dsRNA经过修饰的正义链和反义链Table 21. The modified sense and antisense strands of dsRNA
(‐)hmpNA(A)为实施例1.1节中核苷亚磷酰胺单体1‐1a通过固相合成获得;(+)hmpNA(A)为旋光异构体;(-)hmpNA(A) is obtained by solid-phase synthesis of nucleoside phosphoramidite monomer 1-1a in Section 1.1 of Example; (+)hmpNA(A) is an optical isomer;
(‐)hmpNA(G)为实施例1.6节中核苷亚磷酰胺单体1‐6a通过固相合成获得;(+)hmpNA(G)为旋光异构体;(‐)hmpNA(G) is obtained by solid-phase synthesis of nucleoside phosphoramidite monomer 1‐6a in Section 1.6 of Example; (+)hmpNA(G) is an optical isomer;
(‐)hmpNA(U)为实施例1.7节中核苷亚磷酰胺单体1‐7a通过固相合成获得;(+)hmpNA(U)为旋光异构体。(‐)hmpNA(U) is obtained by solid-phase synthesis of nucleoside phosphoramidite monomer 1‐7a in Section 1.7 of Example; (+)hmpNA(U) is an optical isomer.
小写字母m表示该字母m上游相邻的一个核苷酸为2'‐甲氧基修饰的核苷酸;小写字母f表示该字母f上游相邻的一个核苷酸为2'‐氟代修饰的核苷酸;The lowercase letter m indicates that the nucleotide adjacent to the upstream of the letter m is a 2'-methoxy-modified nucleotide; the lowercase letter f indicates that the nucleotide adjacent to the upstream of the letter f is a 2'-fluoro modified nucleotide of nucleotides;
小写字母s在中间时表示与该字母s两侧相邻的两个核苷酸之间的连接为硫代磷酸酯基连接;When the lowercase letter s is in the middle, it means that the connection between the two adjacent nucleotides on both sides of the letter s is a phosphorothioate group connection;
小写字母s在3’端第一个时表示与该字母s上游相邻的一个核苷酸末端为硫代磷酸酯基。When the lowercase letter s is the first at the 3' end, it means that a nucleotide terminal adjacent to the upstream of the letter s is a phosphorothioate group.
NAG1如下所示:NAG1 looks like this:
人原代肝细胞(PHH)冻存于液氮中,转染前24h,将人原代肝细胞(PHH)复苏后接种于96孔板,接种密度为每孔4×10
4个细胞,每孔100μL培养基。
The primary human hepatocytes (PHH) were cryopreserved in liquid nitrogen. 24 hours before transfection, the primary human hepatocytes (PHH) were resuscitated and inoculated in a 96-well plate at a seeding density of 4 ×104 cells per well. Wells with 100 μl medium.
参照产品说明手册,使用Lipofectamine RNAi MAX(ThermoFisher,13778150)转染dsRNA,dsRNA共设置11个或7个浓度点,最高浓度点终浓度为10nM,3倍或5倍梯度稀释。在处理24h后,使用高通量细胞RNA提取试剂盒进行细胞总RNA提取、RNA逆转录实验和定量实时PCR检测,测定人HSD17B13的mRNA水平,根据GAPDH内参基因水平对人HSD17B13的mRNA水平进行校正。Refer to the product instruction manual, use Lipofectamine RNAi MAX (ThermoFisher, 13778150) to transfect dsRNA, set 11 or 7 concentration points of dsRNA, the final concentration of the highest concentration point is 10nM, 3-fold or 5-fold serial dilution. After 24 hours of treatment, the high-throughput cellular RNA extraction kit was used for total cellular RNA extraction, RNA reverse transcription experiment and quantitative real-time PCR detection to measure the mRNA level of human HSD17B13, and correct the mRNA level of human HSD17B13 according to the level of GAPDH internal reference gene .
结果以相对于经过对照siRNA处理的细胞的人HSD17B13mRNA表达剩余百分比来表示。抑制率的IC
50结果见表22和表23。
Results are expressed as percent remaining human HSD17B13 mRNA expression relative to control siRNA-treated cells. See Table 22 and Table 23 for the IC50 results of the inhibition rate.
表22.dsRNA对人原代肝细胞(PHH)中人HSD17B13的11浓度抑制活性Table 22.dsRNA inhibits the activity of 11 concentrations of human HSD17B13 in primary human hepatocytes (PHH)
表23.缀合的siRNA对人原代肝细胞(PHH)中人HSD17B13的7浓度抑制活性Table 23. Conjugated siRNA inhibits activity of 7 concentrations of human HSD17B13 in primary human hepatocytes (PHH)
Claims (20)
- 一种双链核糖核酸(dsRNA),其中,所述dsRNA包含siRNA和一个或多个与其缀合的配体,所述siRNA包含有义链和反义链,所述反义链在其5’区域的第2位至第8位中的至少一个核苷酸位置处包含式(I)所示的化学修饰、其互变异构体或其药学上可接受的盐:A double-stranded ribonucleic acid (dsRNA), wherein the dsRNA comprises siRNA and one or more ligands conjugated thereto, the siRNA comprises a sense strand and an antisense strand, and the antisense strand is at its 5' At least one nucleotide position from the 2nd to the 8th position of the region contains a chemical modification represented by formula (I), its tautomer or a pharmaceutically acceptable salt thereof:所述式(I)所示的化学修饰选自以下任一结构:The chemical modification shown in the formula (I) is selected from any of the following structures:B各自独立地选自反义链5’端的第2位至第8位对应位置的碱基;B are each independently selected from the bases corresponding to the 2nd to 8th positions at the 5' end of the antisense strand;所述配体选自以下结构或其药学上可接受的盐:The ligand is selected from the following structures or pharmaceutically acceptable salts thereof:所述siRNA为靶向第13型17β-羟基类固醇脱氢酶(HSD17B13)的siRNA。The siRNA is an siRNA targeting type 13 17β-hydroxysteroid dehydrogenase (HSD17B13).
- 如权利要求1所述的dsRNA,其中,所述siRNA的有义链包含至少15个连续核苷酸,且与SEQ ID NO:1至SEQ ID NO:8中任一的核苷酸序列相差不超过3个核苷酸,和/或,The dsRNA according to claim 1, wherein the sense strand of the siRNA comprises at least 15 consecutive nucleotides, and differs from any nucleotide sequence in SEQ ID NO:1 to SEQ ID NO:8. more than 3 nucleotides, and/or,所述siRNA的反义链包含至少19个连续核苷酸,且与SEQ ID NO:9至SEQ ID NO:12中任一的核苷酸序列相差不超过3个核苷酸;The antisense strand of the siRNA comprises at least 19 consecutive nucleotides, and differs from any nucleotide sequence in SEQ ID NO:9 to SEQ ID NO:12 by no more than 3 nucleotides;优选地,所述siRNA的有义链包含SEQ ID NO:1至SEQ ID NO:8中的任一项的核苷酸序列,和/或,Preferably, the sense strand of the siRNA comprises the nucleotide sequence of any one of SEQ ID NO:1 to SEQ ID NO:8, and/or,所述siRNA的反义链包含SEQ ID NO:9至SEQ ID NO:12中的任一项的核苷酸序列;The antisense strand of the siRNA comprises the nucleotide sequence of any one of SEQ ID NO:9 to SEQ ID NO:12;更优选地,More preferably,所述siRNA的有义链包含SEQ ID NO:8所示的核苷酸序列,所述siRNA的反义链包含SEQ ID NO:12所示的核苷酸序列;The sense strand of the siRNA comprises the nucleotide sequence shown in SEQ ID NO:8, and the antisense strand of the siRNA comprises the nucleotide sequence shown in SEQ ID NO:12;所述siRNA的有义链包含SEQ ID NO:6所示的核苷酸序列,所述siRNA的反义链包含SEQ ID NO:11所示的核苷酸序列;The sense strand of the siRNA comprises the nucleotide sequence shown in SEQ ID NO:6, and the antisense strand of the siRNA comprises the nucleotide sequence shown in SEQ ID NO:11;所述siRNA的有义链包含SEQ ID NO:2所示的核苷酸序列,所述siRNA的反 义链包含SEQ ID NO:9所示的核苷酸序列;The sense strand of the siRNA comprises the nucleotide sequence shown in SEQ ID NO:2, and the antisense strand of the siRNA comprises the nucleotide sequence shown in SEQ ID NO:9;所述siRNA的有义链包含SEQ ID NO:4所示的核苷酸序列,所述siRNA的反义链包含SEQ ID NO:10所示的核苷酸序列;The sense strand of the siRNA comprises the nucleotide sequence shown in SEQ ID NO:4, and the antisense strand of the siRNA comprises the nucleotide sequence shown in SEQ ID NO:10;所述siRNA的有义链包含SEQ ID NO:7,所述siRNA的反义链包含SEQ ID NO:12;The sense strand of the siRNA comprises SEQ ID NO:7, and the antisense strand of the siRNA comprises SEQ ID NO:12;所述siRNA的有义链包含SEQ ID NO:5所示的核苷酸序列,所述siRNA的反义链包含SEQ ID NO:11所示的核苷酸序列;The sense strand of the siRNA comprises the nucleotide sequence shown in SEQ ID NO:5, and the antisense strand of the siRNA comprises the nucleotide sequence shown in SEQ ID NO:11;所述siRNA的有义链包含SEQ ID NO:1所示的核苷酸序列,所述siRNA的反义链包含SEQ ID NO:9所示的核苷酸序列;或者The sense strand of the siRNA comprises the nucleotide sequence shown in SEQ ID NO:1, and the antisense strand of the siRNA comprises the nucleotide sequence shown in SEQ ID NO:9; or所述siRNA的有义链包含SEQ ID NO:3所示的核苷酸序列,所述siRNA的反义链包含SEQ ID NO:10所示的核苷酸序列。The sense strand of the siRNA comprises the nucleotide sequence shown in SEQ ID NO:3, and the antisense strand of the siRNA comprises the nucleotide sequence shown in SEQ ID NO:10.
- 如权利要求1或2所述的dsRNA,其中,所述siRNA的有义链的3’端与所述配体缀合。The dsRNA of claim 1 or 2, wherein the 3' end of the sense strand of the siRNA is conjugated to the ligand.
- 如权利要求1-3中任一项所述的dsRNA,其中,所述配体通过磷酸酯基团或硫代磷酸酯基团与所述siRNA有义链的3’端连接;优选通过磷酸二酯基团或硫代磷酸二酯基团连接,更优选通过磷酸二酯基团连接。The dsRNA according to any one of claims 1-3, wherein the ligand is connected to the 3' end of the sense strand of the siRNA through a phosphate group or a phosphorothioate group; ester groups or phosphorothioate groups, more preferably through phosphodiester groups.
- 如权利要求1-4中任一项所述的dsRNA,其中,式(I)所示的化学修饰、其互变异构体或其药学上可接受的盐修饰的核苷酸位于反义链5’端的第5位、第6位或第7位,优选位于第7位。The dsRNA according to any one of claims 1-4, wherein the chemical modification shown in formula (I), its tautomer or its pharmaceutically acceptable salt modified nucleotide is located on the antisense strand The 5th, 6th or 7th position at the 5' end, preferably at the 7th position.
- 如权利要求1-5中任一项所述的dsRNA,其中,The dsRNA according to any one of claims 1-5, wherein,所述的siRNA的有义链和/或反义链中至少一个另外的核苷酸为修饰的核苷酸。At least one additional nucleotide in the sense and/or antisense strand of the siRNA is a modified nucleotide.
- 如权利要求1-6中任一项所述的dsRNA,其中,The dsRNA according to any one of claims 1-6, wherein,所述siRNA的有义链含有如下式所示的核苷酸序列:The sense strand of the siRNA contains the nucleotide sequence shown in the following formula:5’-N aN aN aN aN aN aN bN bN bN aN aN aN aN aN aN aN aN aN a-3’;或, 5'-N a N a N a N a N a N a N b N b N b N a N a N a N a N a N a N a N a N a N a -3'; or,5’-N aN aN aN aN bN aN bN bN bN aN aN aN aN aN aN aN aN aN a-3’; 5'-N a N a N a N a N b N a N b N b N b N a N a N a N a N a N a N a N a N a N a -3 ' ;其中,N a为2'-甲氧基修饰的核苷酸,N b为2'-氟代修饰的核苷酸。 Wherein, N a is a 2'-methoxy-modified nucleotide, and N b is a 2'-fluoro-modified nucleotide.
- 如权利要求1-7中任一项所述的dsRNA,其中,所述反义链含有如下式所示的核苷酸序列:The dsRNA according to any one of claims 1-7, wherein the antisense strand contains a nucleotide sequence as shown in the following formula:5’-N a’N b’N a’N b’N a’N b’W’N a’N a’N b’N a’N b’N a’N b’N a’N b’N a’N b’N a’N a’N a’-3’; 5'-N a 'N b 'N a 'N b ' N a 'N b 'W'N a 'N a 'N b 'N a 'N b 'N a 'N b 'N a 'N b ' N a'N b'N a'N a'N a' -3';N a’为2'-甲氧基修饰的核苷酸,N b’为2'-氟代修饰的核苷酸; N a 'is a 2'-methoxy-modified nucleotide, and N b ' is a 2'-fluoro-modified nucleotide;W’表示式(I)所示的化学修饰、其互变异构体或其药学上可接受的盐修饰的核苷酸,所述式(I)所示的化学修饰选自:W' represents the chemical modification shown in formula (I), its tautomer or a pharmaceutically acceptable salt modified nucleotide, the chemical modification shown in formula (I) is selected from:其中:B与所述反义链在其5’端的第7位核苷酸未被修饰时的碱基相同。Wherein: B is identical with the base when the 7th nucleotide at the 5' end of the antisense strand is not modified.
- 如权利要求1-8中任一项所述的dsRNA,其中,所述有义链和/或反义链中至少一个磷酸酯基为具有修饰基团的磷酸酯基;优选地,所述具有修饰基团的磷酸酯基为硫代磷酸二酯基。The dsRNA according to any one of claims 1-8, wherein at least one phosphate group in the sense strand and/or antisense strand is a phosphate group with a modification group; preferably, the The phosphate group of the modifying group is a phosphorothioate group.
- 如权利要求9所述的dsRNA,其中,所述硫代磷酸二酯基存在于以下位置中的至少一处:The dsRNA of claim 9, wherein the phosphorothioate group is present in at least one of the following positions:所述有义链的5'端第1个核苷酸和第2个核苷酸之间;Between the first nucleotide and the second nucleotide at the 5' end of the sense strand;所述有义链的5'端第2个核苷酸和第3个核苷酸之间;Between the 2nd nucleotide and the 3rd nucleotide of the 5' end of the sense strand;所述反义链的5'端第1个核苷酸和第2个核苷酸之间;Between the first nucleotide and the second nucleotide at the 5' end of the antisense strand;所述反义链的5'端第2个核苷酸和第3个核苷酸之间;Between the 2nd nucleotide and the 3rd nucleotide of the 5' end of the antisense strand;所述反义链的3'端第1个核苷酸和第2个核苷酸之间;以及Between the first nucleotide and the second nucleotide of the 3' end of the antisense strand; and所述反义链的3'端第2个核苷酸和第3个核苷酸之间;Between the 2nd nucleotide and the 3rd nucleotide of the 3' end of the antisense strand;优选地,Preferably,所述有义链和/或反义链中包括多个硫代磷酸二酯基,所述硫代磷酸二酯基存在于:The sense strand and/or the antisense strand include a plurality of phosphorothioate groups present in:所述有义链的5'端第1个核苷酸和第2个核苷酸之间;和,Between the 1st nucleotide and the 2nd nucleotide of the 5' end of the sense strand; and,所述有义链的5'端第2个核苷酸和第3个核苷酸之间;和,Between the 2nd and 3rd nucleotides of the 5' end of the sense strand; and,所述反义链的5'端第1个核苷酸和第2个核苷酸之间;和,Between the first nucleotide and the second nucleotide of the 5' end of the antisense strand; and,所述反义链的5'端第2个核苷酸和第3个核苷酸之间;和,between the 2nd and 3rd nucleotides of the 5' end of the antisense strand; and,所述反义链的3'端第1个核苷酸和第2个核苷酸之间;和,Between the first nucleotide and the second nucleotide of the 3' end of the antisense strand; and,所述反义链的3'端第2个核苷酸和第3个核苷酸之间。Between the second nucleotide and the third nucleotide at the 3' end of the antisense strand.
- 一种dsRNA,其中,A dsRNA, wherein,所述dsRNA为以下任一方案:The dsRNA is any of the following schemes:包含SEQ ID NO:20所示的有义链和SEQ ID NO:24所示的反义链;或,comprising the sense strand set forth in SEQ ID NO:20 and the antisense strand set forth in SEQ ID NO:24; or,包含SEQ ID NO:18所示的有义链和SEQ ID NO:23所示的反义链;或,comprising the sense strand set forth in SEQ ID NO:18 and the antisense strand set forth in SEQ ID NO:23; or,包含SEQ ID NO:14所示的有义链和SEQ ID NO:21所示的反义链;或,comprising the sense strand set forth in SEQ ID NO:14 and the antisense strand set forth in SEQ ID NO:21; or,包含SEQ ID NO:16所示的有义链和SEQ ID NO:22所示的反义链;或,comprising the sense strand set forth in SEQ ID NO:16 and the antisense strand set forth in SEQ ID NO:22; or,包含SEQ ID NO:19所示的有义链和SEQ ID NO:24所示的反义链;或,comprising the sense strand set forth in SEQ ID NO:19 and the antisense strand set forth in SEQ ID NO:24; or,包含SEQ ID NO:17所示的有义链和SEQ ID NO:23所示的反义链;或,comprising the sense strand set forth in SEQ ID NO:17 and the antisense strand set forth in SEQ ID NO:23; or,包含SEQ ID NO:13所示的有义链和SEQ ID NO:21所示的反义链;或,comprising the sense strand set forth in SEQ ID NO:13 and the antisense strand set forth in SEQ ID NO:21; or,包含SEQ ID NO:15所示的有义链和SEQ ID NO:22所示的反义链。Contains the sense strand shown in SEQ ID NO:15 and the antisense strand shown in SEQ ID NO:22.
- 如权利要求1-11中任一项所述的dsRNA,其中,所述dsRNA选自如下任一结构或其药学上可接受的盐:The dsRNA according to any one of claims 1-11, wherein the dsRNA is selected from any of the following structures or pharmaceutically acceptable salts thereof:其中,Af=腺嘌呤2'-F核糖核苷;Cf=胞嘧啶2'-F核糖核苷;Uf=尿嘧啶2'-F核糖核苷;Am=腺嘌呤2'-OMe核糖核苷;Cm=胞嘧啶2'-OMe核糖核苷;Gf=鸟嘌呤2'-F核糖核苷;Gm=鸟嘌呤2'-OMe核糖核苷;Um=尿嘧啶2'-OMe核糖核苷;Wherein, Af=Adenine 2'-F ribonucleoside; Cf=Cytosine 2'-F ribonucleoside; Uf=Uracil 2'-F ribonucleoside; Am=Adenine 2'-OMe ribonucleoside; Cm=cytosine 2'-OMe ribonucleoside; Gf=guanine 2'-F ribonucleoside; Gm=guanine 2'-OMe ribonucleoside; Um=uridine 2'-OMe ribonucleoside;
- 一种药物组合物,其包含如权利要求1-12中任一项所述的dsRNA;优选地,所述的药物组合物还包含一种或多种药学上可接受的赋形剂。A pharmaceutical composition comprising the dsRNA according to any one of claims 1-12; preferably, the pharmaceutical composition further comprises one or more pharmaceutically acceptable excipients.
- 一种如权利要求1-12中任一项所述的dsRNA或如权利要求13所述的药物组合物在制备药物中的应用;所述dsRNA药物用于预防和/或治疗肝炎、肝纤维化、非酒精性脂肪性肝炎、非酒精性脂肪性肝病、肝硬化、酒精性脂肪性肝炎、酒精性脂肪肝病、HCV-相关的硬化、药物引起的肝损伤或肝细胞坏死或者慢性纤维炎性肝病。A dsRNA as described in any one of claims 1-12 or the application of the pharmaceutical composition as described in claim 13 in the preparation of medicine; Said dsRNA medicine is used for preventing and/or treating hepatitis, liver fibrosis , nonalcoholic steatohepatitis, nonalcoholic fatty liver disease, cirrhosis, alcoholic steatohepatitis, alcoholic fatty liver disease, HCV-related cirrhosis, drug-induced liver injury or hepatocellular necrosis, or chronic fibroinflammatory liver disease .
- 一种抑制靶基因HSD17B13表达的方法,其包括向受试者给予治疗有效量或有效剂量的如权利要求1-12中任一项所述的dsRNA或如权利要求13所述的药物组合物。A method for inhibiting the expression of target gene HSD17B13, comprising administering to a subject a therapeutically effective amount or an effective dose of the dsRNA according to any one of claims 1-12 or the pharmaceutical composition according to claim 13.
- 一种递送寡核苷酸至肝脏的方法,其包括向受试者给予有效量或有效剂量的如权利要求1-12中任一项所述的dsRNA或如权利要求13所述的药物组合物。A method of delivering oligonucleotides to the liver, comprising administering to a subject an effective amount or an effective dose of the dsRNA according to any one of claims 1-12 or the pharmaceutical composition according to claim 13 .
- 一种细胞,其包含如权利要求1-12中任一项所述的dsRNA。A cell comprising the dsRNA of any one of claims 1-12.
- 一种试剂盒,其包含如权利要求1-12中任一项所述的dsRNA或如权利要求13中任一项所述的药物组合物。A kit comprising the dsRNA according to any one of claims 1-12 or the pharmaceutical composition according to any one of claim 13.
- 一种载体,其包含如权利要求1-12中任一项所述的dsRNA。A carrier comprising the dsRNA according to any one of claims 1-12.
- 一种制备dsRNA或药物组合物的方法,其包括:合成如权利要求1-12中任一项所述的dsRNA或如权利要求13所述的药物组合物。A method for preparing dsRNA or a pharmaceutical composition, comprising: synthesizing the dsRNA according to any one of claims 1-12 or the pharmaceutical composition according to claim 13.
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