WO2023165477A1 - Expression cassette of interleukin 1 receptor antagonist protein and aav-based gene delivery system - Google Patents

Expression cassette of interleukin 1 receptor antagonist protein and aav-based gene delivery system Download PDF

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WO2023165477A1
WO2023165477A1 PCT/CN2023/078792 CN2023078792W WO2023165477A1 WO 2023165477 A1 WO2023165477 A1 WO 2023165477A1 CN 2023078792 W CN2023078792 W CN 2023078792W WO 2023165477 A1 WO2023165477 A1 WO 2023165477A1
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seq
promoter
expression cassette
intron
disease
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Chinese (zh)
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肖啸
周凯艺
郑静
郑浩
蒋威
杜增民
赵阳
陈晨
王慧
王天翼
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上海勉亦生物科技有限公司
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    • C07K14/715Receptors; Cell surface antigens; Cell surface determinants for cytokines; for lymphokines; for interferons
    • C07K14/7155Receptors; Cell surface antigens; Cell surface determinants for cytokines; for lymphokines; for interferons for interleukins [IL]
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    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
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    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K48/00Medicinal preparations containing genetic material which is inserted into cells of the living body to treat genetic diseases; Gene therapy
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    • A61K48/0058Nucleic acids adapted for tissue specific expression, e.g. having tissue specific promoters as part of a contruct
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K48/00Medicinal preparations containing genetic material which is inserted into cells of the living body to treat genetic diseases; Gene therapy
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    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P19/00Drugs for skeletal disorders
    • A61P19/02Drugs for skeletal disorders for joint disorders, e.g. arthritis, arthrosis
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P19/00Drugs for skeletal disorders
    • A61P19/04Drugs for skeletal disorders for non-specific disorders of the connective tissue
    • AHUMAN NECESSITIES
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    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P29/00Non-central analgesic, antipyretic or antiinflammatory agents, e.g. antirheumatic agents; Non-steroidal antiinflammatory drugs [NSAID]
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    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79Vectors or expression systems specially adapted for eukaryotic hosts
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    • C12N2750/14011Parvoviridae
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    • C12N2830/50Vector systems having a special element relevant for transcription regulating RNA stability, not being an intron, e.g. poly A signal

Definitions

  • the present disclosure relates to a nucleic acid molecule encoding an interleukin-1 receptor antagonist protein, a transgene expression cassette comprising the nucleic acid molecule, a gene delivery system comprising the transgene expression cassette and applications thereof.
  • Interleukin-1 is a pleiotropic cytokine that mainly affects inflammation and immune response, and also regulates other physiological functions of the body, which has an important impact on the pathogenesis of diseases.
  • IL-1 levels are elevated in acute inflammatory diseases (such as septic shock), chronic inflammatory diseases (such as rheumatoid arthritis) and malignant tumors.
  • IL-1 is secreted by macrophages and initiates the inflammatory response.
  • studies have shown that IL-1 plays an important role in tumorigenesis (Krelin Y et al., Cancer Res, 2007;67(3):1062-1071).
  • the IL-1 family mainly includes IL-1 ⁇ and IL-1 ⁇ .
  • IL-1 ⁇ is not produced under normal physiological conditions, and is only secreted under inflammatory signals; while IL-1 ⁇ exists in the cytoplasm and on the cell membrane under normal physiological conditions, and its expression level increases when inflammation occurs (WU X et al., Chinese journal of lung cancer, 2010; 13(12):1145-1148).
  • Interleukin 1 receptor antagonist protein is a naturally occurring IL-1 ⁇ inhibitory protein molecule, which can bind to the IL1 receptor on the cell surface without initiating signal transduction, thereby competitively blocking the IL1 signaling pathway .
  • the cDNA encoding IL-1Ra is introduced into the cells of the target tissue of the patient to achieve the expression of the target protein IL-1Ra, thereby playing a therapeutic role. Studies have shown that recombinant IL-1Ra can reduce the volume of mouse tumors and inhibit tumor-mediated neovascularization (Bar D et al., FASEB J., 2004; 18(1):161-163).
  • Anakinra is a recombinant IL-1Ra that has been marketed for the treatment of osteoarthritis (OA), but due to the short half-life of the drug, it is difficult to maintain an effective therapeutic concentration, so its therapeutic effect on OA is not ideal. In addition, repeated injections will also bring a lot of inconvenience and pain to patients.
  • OA osteoarthritis
  • Osteoarthritis is a common joint disease. According to statistics, males account for about 10% of the elderly population over 60 years old, while females account for about 18%. Clinically, the main manifestations are joint pain, stiffness, severe and even complete loss of joint function, which brings a heavy burden to the patient's family and society. human and financial burden. The pathogenesis of osteoarthritis is complex and diverse. Studies have shown that the disease is caused by multiple factors such as genetics, biology (including aging, inflammation, etc.) and biomechanics. So far, there is no effective treatment .
  • interleukin 1 interleukin 1
  • TNF ⁇ tumor necrosis factor
  • IL ⁇ 1 ⁇ reduces key extracellular matrix proteins (type II collagen and proteoglycan ) and stimulate the production of matrix-degrading proteases (MMP-3 and ADAMTS-4).
  • IL-1 ⁇ can also induce apoptosis of chondrocytes by up-regulating Bcl-2 protein family members in chondrocytes, mitochondrial depolarization and production of reactive oxygen species. Therefore, blocking the signaling pathway of IL-1 has become a popular target for the research and treatment of OA.
  • AAV adeno-associated virus
  • retroviruses, lentiviruses, and adenoviruses are not suitable for large-scale production applications due to safety and technical considerations, and AAV with low immunogenicity has been widely recognized.
  • AAV has good safety and high infection efficiency, as well as the characteristics of mediating long-term gene expression.
  • AAV-mediated gene therapy drugs have been approved, and AAV vectors are ideal gene therapy tools.
  • AAV has low immunogenicity, it is often reported clinically that systemic administration of AAV will trigger a severe immune response, which is mostly caused by the use of higher doses.
  • systemic administration of AAV will trigger a severe immune response, which is mostly caused by the use of higher doses.
  • local injection of viral vectors into the joint cavity can effectively avoid adverse reactions caused by systemic administration.
  • the amount of viral vector can be reduced and high levels of foreign gene expression can be maintained.
  • the present disclosure provides a nucleic acid molecule encoding an interleukin 1 receptor antagonist protein, the nucleotide sequence of which is the same as that shown in SEQ ID NO: 7 or SEQ ID NO: 8
  • the sequences are at least 50% identical, preferably at least 60%, 70%, 80%, 85%, 90%, 95%, 99% or 100% identical.
  • the nucleic acid molecule comprises the nucleotide sequence shown in SEQ ID NO: 7 or SEQ ID NO: 8. In a preferred embodiment, the nucleotide sequence of the nucleic acid molecule is shown in SEQ ID NO: 7 or SEQ ID NO: 8.
  • the nucleic acid molecule encoding the human interleukin 1 receptor antagonist protein of the present disclosure comprises a codon-optimized human interleukin 1 receptor antagonist protein coding nucleic acid sequence (SEQ ID NO: 7 or SEQ ID NO: 8), and an uncoded Compared with the original human interleukin 1 receptor antagonist protein encoding nucleic acid sequence (SEQ ID NO: 6) optimized by codon, the human interleukin 1 receptor antagonist protein encoding nucleic acid sequence (SEQ ID NO: 7 or SEQ ID NO: 7) through codon optimization NO: 8) has a higher white Interlein 1 receptor antagonist protein expression level.
  • the present disclosure provides a transgene expression cassette, which includes: a promoter, the nucleic acid molecule according to the first aspect, and polyA.
  • polyA is bGH polyA (SEQ ID NO: 2).
  • the promoter is selected from: CB promoter, CAG promoter, SV40 promoter, collagen collagen promoter, proteoglycan aggrecan promoter, synoviolin gene promoter, adipose tissue specific promoter PPAR white gene promoter, transcription factor SOX9 promoter and osteocalcin promoter.
  • the promoter is a CB promoter (SEQ ID NO: 1).
  • the transgene expression cassette further includes: an intron located behind the promoter (abbreviated as an intron after the promoter), and/or two ITRs located at both ends, the two ITRs are each independently Normal ITR or shortened ITR.
  • the intron behind the promoter is selected from the group consisting of: SV40 intron (SEQ ID NO: 3), VH4 intron (SEQ ID NO: 4), Chi intron (SEQ ID NO : 5), U12 intron, RHD intron and other class 1 introns.
  • the intron following the promoter is SV40 or VH4.
  • the promoter is a CB promoter, and the intron behind the promoter is VH4. In a preferred embodiment, the promoter is a CB promoter, and the intron behind the promoter is SV40.
  • the transgene expression cassette further comprises: at least one (eg, 1 or 2) introns inserted into the nucleic acid molecule according to the first aspect.
  • the inserted intron is selected from the group consisting of: SV40 intron, VH4 intron and Chi intron. The inventors found that inserting such an intron can better enhance the expression and secretion of the target protein (interleukin-1 receptor antagonist protein).
  • the nucleotide sequence of the transgenic expression cassette is such as SEQ ID NO: 10, SEQ ID NO: 11, SEQ ID NO: 12, SEQ ID NO: 13, SEQ ID NO: 14, SEQ ID NO: 16 , SEQ ID NO: 17, SEQ ID NO: 18, SEQ ID NO: 19, SEQ ID NO: 20, SEQ ID NO: 21 or SEQ ID NO: 22, preferably SEQ ID NO: 12 and SEQ ID NO: 19, more preferably SEQ ID NO: 19.
  • the present disclosure provides a gene delivery system, which includes: the transgene expression cassette according to the second aspect and AAV capsid protein.
  • the above-mentioned AAV capsid protein is a natural AAV capsid protein or an artificially modified AAV capsid protein.
  • the AAV is selected from the group consisting of: AAV1, AAV2, AAV3, AAV4, AAV5, AAV6, AAV7, AAV8, AAV9, AAV10, AAV11, AAV12, AAV-DJ and AAV843.
  • the AAV capsid protein is AAV843, and its amino acid sequence is shown in SEQ ID NO: 24.
  • the transgene expression cassette and gene delivery system of the present disclosure can express higher levels of interleukin-1 receptor antagonist protein (IL1RA), thereby blocking the signaling pathway of IL-1, and achieving better therapeutic effects on malignant tumors and inflammatory diseases (such as joint inflammation, especially osteoarthritis).
  • IL1RA interleukin-1 receptor antagonist protein
  • the gene delivery system of the present disclosure can achieve long-term stable delivery of therapeutic proteins.
  • the present disclosure provides the use of the nucleic acid molecule according to the first aspect, the transgene expression cassette according to the second aspect, or the gene delivery system according to the third aspect in the preparation of a drug for treating a disease , the disease is a disease that can be improved by blocking IL-1 signaling pathway, such as acute inflammatory disease, chronic inflammatory disease and malignant tumor.
  • the disease is joint inflammation, including osteoarthritis (OA), rheumatoid arthritis (RA), synovitis, hemophilic arthritis and other inflammatory joint inflammations.
  • OA osteoarthritis
  • RA rheumatoid arthritis
  • synovitis hephilic arthritis
  • hemophilic arthritis other inflammatory joint inflammations.
  • the disease is osteoarthritis (OA).
  • the present disclosure provides a medicine, which comprises: the nucleic acid molecule according to the first aspect, the transgene expression cassette according to the second aspect, or the gene delivery system according to the third aspect; and excipient agent.
  • excipients include salts, organics and/or surfactants.
  • the medicament is used to treat a disease that can be improved by blocking the IL-1 signaling pathway.
  • the disease is an acute inflammatory disease, a chronic inflammatory disease and/or a malignant tumor.
  • the disease is joint inflammation, including joint inflammation caused by osteoarthritis (OA), rheumatoid arthritis (RA), synovitis, hemophilic arthritis and other inflammatory conditions.
  • the present disclosure provides a method for treating a disease, comprising administering a therapeutically effective amount of the drug according to the fifth aspect to a subject in need, the disease being selected from acute inflammatory diseases, chronic inflammatory diseases and Malignant tumor.
  • the disease is joint inflammation, including osteoarthritis (OA), rheumatoid arthritis (RA), synovitis, hemophilic arthritis and other inflammatory joint inflammations.
  • OA osteoarthritis
  • RA rheumatoid arthritis
  • synovitis hephilic arthritis
  • hemophilic arthritis other inflammatory joint inflammations.
  • the disease is osteoarthritis (OA).
  • the drug is administered systemically or locally, such as intravenous administration, topical contact, and intralesional administration, preferably locally to the joint cavity, such as intra-articular injection.
  • the present disclosure provides an engineered AAV capsid protein (AAV843), wherein the amino acid sequence of the AAV capsid protein is shown in SEQ ID NO: 24.
  • the present disclosure provides a nucleic acid molecule encoding the AAV843 capsid protein according to the seventh aspect.
  • the nucleotide sequence of the nucleic acid molecule is shown in SEQ ID NO: 23.
  • an AAV vector packaged with an AAV capsid protein of the present disclosure comprises an exogenous polynucleotide comprising a nucleotide sequence encoding a therapeutic protein.
  • the therapeutic protein is a protein that blocks the IL1 signaling pathway.
  • the therapeutic protein is interleukin 1 receptor antagonist protein.
  • the exogenous polynucleotide comprises a nucleotide sequence encoding an interleukin-1 receptor antagonist protein.
  • Figure 1 is a schematic diagram of the B93, B94, B95, B96, B97, B98, B126, B127, B128, B129, B130, B131, B132 and B133 expression cassettes.
  • Figure 2C shows the expression level of IL1RA in mouse serum after 3 weeks after B93, B94, B95, B96, B97, and B98 expression cassettes were packaged with AAV843 capsids, and the mice were injected with the virus through the tail vein.
  • the dose was 1E+13vg/kg , ELISA test results.
  • n 3, *p ⁇ 0.05, t-test.
  • Figure 3A shows the effects of B93, B94, B95, B96, B97 and B98 expression cassettes on IL1 ⁇ -induced inflammatory factors and soft Inhibition of elevated levels of extraosseous matrix-degrading proteases.
  • Figure 3B shows the inhibitory effects of B126, B127, B128, B129, B130, B131, B132 and B133 expression cassettes on IL1 ⁇ -induced increase in the levels of inflammatory factors and extrachondral matrix degrading proteases.
  • Figure 4 shows a rat model of osteoarthritis induced by shearing of the cruciate ligament and removal of part of the meniscus.
  • SD rats were injected with AAV particles at a dose of 1 ⁇ 10 11 vg/joint and 1 ⁇ 10 12 vg/joint respectively.
  • the particles had AAV843 capsid and packaged B130 expression cassette.
  • the joint swelling of the rats was measured.
  • Blood was collected at 2, 4, and 8 weeks after virus injection to measure the inflammation level of rat serum.
  • Eight weeks after virus injection the lesioned joints of the rats were scanned and photographed by micro-CT. Finally, the rats were euthanized, and the joints were taken for paraffin sections for immunohistochemistry, and mRNA was extracted for qPCR determination.
  • Figure 8 shows the results of qPCR detection of the expression levels of target proteins, inflammatory factors, degrading enzymes and cartilage matrix proteins by extracting mRNA from the joints at 8 weeks after intra-articular injection of AAV843-B130 virus particles into the OA rat model.
  • n 3, *p ⁇ 0.05, **p ⁇ 0.01, t-test.
  • Figure 10 shows codon-optimized human interleukin-1 receptor antagonist protein encoding nucleic acid optimized sequence one (SEQ ID NO: 7).
  • Figure 11 shows codon-optimized human interleukin 1 receptor antagonist protein encoding nucleic acid optimized sequence two (SEQ ID NO: 8).
  • Figure 12 shows the nucleotide sequence (SEQ ID NO: 10) of the B94 expression cassette.
  • Figure 13 shows the nucleotide sequence (SEQ ID NO: 11) of the B95 expression cassette.
  • Figure 14 shows the nucleotide sequence (SEQ ID NO: 12) of B96 expression cassette.
  • Figure 15 shows the nucleotide sequence (SEQ ID NO: 13) of the B97 expression cassette.
  • Figure 16 shows the nucleotide sequence (SEQ ID NO: 14) of the B98 expression cassette.
  • Figure 17 shows the nucleotide sequence (SEQ ID NO: 16) of B127 expression cassette.
  • Figure 18 shows the nucleotide sequence (SEQ ID NO: 17) of the B128 expression cassette.
  • Figure 19 shows the nucleotide sequence (SEQ ID NO: 18) of the B129 expression cassette.
  • Figure 20 shows the nucleotide sequence (SEQ ID NO: 19) of the B130 expression cassette.
  • Figure 21 shows the nucleotide sequence (SEQ ID NO: 20) of the B131 expression cassette.
  • Figure 22 shows the nucleotide sequence (SEQ ID NO: 21) of the B132 expression cassette.
  • Figure 23 shows the nucleotide sequence (SEQ ID NO: 22) of the B133 expression cassette.
  • Figure 24 shows the nucleotide sequence (SEQ ID NO: 23) encoding AAV843 capsid protein.
  • Figure 25 shows the amino acid sequence of the AAV843 capsid protein (SEQ ID NO: 24).
  • nucleic acid or polynucleotide sequences listed herein are in single-stranded form, oriented 5' to 3', left to right. Nucleotides and amino acids are presented herein using the format recommended by the IUPACIUB Biochemical Nomenclature Commission, using either the single-letter code or the three-letter code for the amino acids.
  • polynucleotide is synonymous with “nucleic acid” and refers to a polymeric form of nucleotides of any length, including deoxyribonucleotides or ribonucleotides, mixed sequences thereof, or the like.
  • a polynucleotide may include modified nucleotides, such as methylated or restricted nucleotides and nucleotide analogs.
  • the terms "patient” and “subject” are used interchangeably and in their conventional sense to refer to an organism suffering from or susceptible to a condition that can be prevented or treated by administering the medicaments of the present disclosure, and Humans and non-human animals (eg, rodents or other mammals) are included.
  • the subject is a non-human animal (e.g., chimpanzees and other ape and monkey species; farm animals, Such as cattle, sheep, pigs, goats and horses; domestic mammals such as dogs and cats; laboratory animals including rodents such as mice, rats and guinea pigs; chickens and other chickens, ducks, geese, etc.).
  • the subject is a mammal. In one embodiment, the subject is a human.
  • treating includes: (1) inhibiting the condition, disease or disorder, i.e., arresting, reducing or delaying the development of the disease or its recurrence or the development of at least one clinical or subclinical symptom thereof; or (2) Ameliorating a disease, ie, causing regression of at least one of a condition, disease or disorder, or clinical or subclinical symptoms thereof.
  • a therapeutically effective amount refers to a dose that produces the therapeutic effect for which it is administered.
  • a therapeutically effective amount of a drug suitable for treating an inflammatory disease of the joint may be an amount capable of preventing or ameliorating one or more symptoms associated with the inflammatory disease of the joint.
  • the term “amelioration” refers to an amelioration of a symptom associated with a disease, and may refer to an amelioration of at least one parameter that measures or quantifies the symptom.
  • the term "preventing" a condition, disease or disorder includes preventing, delaying or reducing the incidence and/or likelihood of the occurrence of at least one clinical or subclinical symptom of a developing condition, disease or disorder in a subject,
  • the subject may suffer from or be susceptible to the condition, disease or disorder but has not experienced or exhibited clinical or subclinical symptoms of the condition, disease or disorder.
  • topical administration or “local route” refers to administration with a local effect.
  • transduction refers to the process of delivering exogenous nucleic acid into a host cell, followed by transcription and translation of the polynucleotide product, which involves the transfer of exogenous A source polynucleotide is introduced into a host cell.
  • gene delivery refers to the introduction of exogenous polynucleotides into cells for gene delivery, including targeting, binding, uptake, transport, replicon integration and expression.
  • gene expression refers to the process of gene transcription, translation and post-translational modification to produce the gene's RNA or protein product.
  • infection refers to the process by which a virus or virus particle comprising a polynucleotide component delivers a polynucleotide into a cell and produces its RNA and protein products, and may also refer to the process of virus replication in a host cell .
  • vector refers to one or a series of macromolecules that encapsulate a polynucleotide, which facilitates the delivery of the polynucleotide to target cells in vitro or in vivo.
  • Types of vectors include, but are not limited to, plasmids, viral vectors, liposomes, and other gene delivery vehicles.
  • the polynucleotides to be delivered are sometimes referred to as "expression cassettes" or “transgenic expression cassettes,” which may include, but are not limited to, certain proteins or synthetic polypeptides (which can enhance, inhibit, weaken, protect, trigger, or prevent certain biological biological and physiological functions), coding sequences of interest in vaccine development (e.g. expressing immune response proteins, polynucleotides of polypeptides or peptides), coding sequences of RNAi materials (eg, shRNA, siRNA, antisense oligonucleotides), or alternative biomarkers.
  • expression cassette refers to a polynucleotide fragment encoding a specific protein, polypeptide or RNAi element, which can be cloned into a plasmid vector.
  • a "cassette” can also be packaged into an AAV particle and used as the viral genome to deliver the transgene product into target cells.
  • the "cassette” may also include other regulatory elements, such as specific promoters/enhancers, polyA, introns, etc., to enhance or attenuate the expression of the transgene product.
  • the transgene cassette contains a number of regulatory elements to enable packaging of the transgene into the virus, such as a normal ITR of 145 bp, a shortened ITR of approximately 100 bp in length, in addition to the sequence encoding the protein product.
  • the transgenic cassette further comprises polynucleotide elements for controlling expression of the protein product, such as origins of replication, polyadenylation signals, promoters, and enhancers (e.g., with vertebrate ⁇ -actin, ⁇ - CMV promoters of globulin or ⁇ -globin regulatory elements or other hybrid CMV promoters (called CB and CAG promoters, SV40 promoter).
  • Promoters and enhancers can be activated by chemicals or hormones (such as doxycycline or tamoxifen) to ensure gene expression at specific time points.
  • promoters and enhancers may be natural or artificial or chimeric sequences, ie prokaryotic or eukaryotic sequences.
  • the inducible regulatory element for gene expression may be a tissue or organ-specific promoter or enhancer, including but not limited to: promoters specific to various types of joint tissue cells, For example, articular chondrocyte lineage-specific promoters (e.g., collagen promoter, aggrecan promoter), synoviolin gene promoters, adipose tissue-specific promoters (e.g., PPAR white gene promoter), osteoprogenitor cell-specific promoters promoters (such as the transcription factor SOX9 promoter), and specific promoters of the osteoblast lineage (such as the osteocalcin promoter).
  • promoters specific to various types of joint tissue cells For example, articular chondrocyte lineage-specific promoters (e.g., collagen promoter, aggrecan promoter), synoviolin gene promoters, adipose tissue-specific promoters (e.g., PPAR white gene promoter), osteoprogenitor cell-specific promoters promoters (such
  • ITR inverted terminal repeat
  • AAV inverted terminal repeat
  • AAV types 1-11 avian AAV, bovine AAV, canine AAV, equine AAV, and ovine AAV.
  • AAV terminal repeats need not have native terminal repeats, so long as the terminal repeats are available for viral replication, packaging and integration.
  • trans-element refers to a transgene cassette packaged in AAV particles and expressed in target cells to produce a therapeutic protein product.
  • cogniated refers to a polynucleotide sequence modified from its native form. Such modifications result in differences of one or more base pairs, with or without changes in the corresponding amino acid sequences, which may enhance or inhibit the Expression of the gene and/or cellular response to the modified polynucleotide sequence.
  • the AAV capsid protein contains VP1, VP2 and VP3 proteins, and the VP2 and VP3 proteins undergo transcription and translation at the start codon inside the VP1 protein, that is, the VP1 sequence contains the VP2 and VP3 sequences.
  • the AAV capsid protein can be any AAV serotype capsid protein, including native AAV capsid proteins (e.g., native AAV types 1-11, avian AAV, bovine AAV, canine AAV, equine AAV, and ovine AAV).
  • native AAV capsid proteins e.g., native AAV types 1-11, avian AAV, bovine AAV, canine AAV, equine AAV, and ovine AAV.
  • AAV capsid protein and other engineered AAV capsid proteins (eg, engineered capsid proteins of types 1-11, avian AAV, bovine AAV, canine AAV, equine AAV, and ovine AAV).
  • the genome sequences, ITR sequences, Rep and Cap proteins of different AAV serotypes are known in the art. These sequences can be found in the literature or in public databases, such as the GenBank database.
  • the present disclosure provides a therapeutic tool that can antagonize the IL1 signaling pathway, which can be used to treat various diseases with related pathological mechanisms, including but not limited to: malignant tumors and inflammatory diseases (including acute inflammatory diseases and chronic Inflammatory diseases, such as joint inflammatory diseases, such as osteoarthritis, rheumatoid arthritis, synovitis, hemophilic arthritis or other inflammation-induced joint inflammatory diseases).
  • malignant tumors and inflammatory diseases including acute inflammatory diseases and chronic Inflammatory diseases, such as joint inflammatory diseases, such as osteoarthritis, rheumatoid arthritis, synovitis, hemophilic arthritis or other inflammation-induced joint inflammatory diseases.
  • the protein product of the therapeutic tool (such as a transgene expression cassette) includes a protein that antagonizes the IL1 signaling pathway, such as but not limited to, IL-1Ra, recombinant IL-1R soluble receptor, anti-IL-1 antibody.
  • an AAV843 vector is used to deliver a gene expressing IL-IRa.
  • the intron behind the promoter is VH4, and the transgenic expression cassette B93 of the nucleic acid sequence encoding the original human interleukin-1 receptor antagonist protein without codon optimization is constructed, and its nucleotide The sequence is shown in SEQ ID NO:9.
  • the intron behind the promoter is VH4, and the codon-optimized human interleukin 1 receptor antagonistic protein coding nucleic acid sequence (optimized sequence one (IL1Ra(1)), SEQ ID NO: 7) the transgenic expression cassette B94, its nucleotide sequence is as shown in SEQ ID NO: 10.
  • the intron behind the promoter is VH4, and the Chi intron is inserted into the optimized sequence one (SEQ ID NO: 7) to construct the transgenic expression cassette B95, its nucleotide sequence As shown in SEQ ID NO: 11.
  • CB is used as the promoter
  • the intron behind the promoter is VH4
  • two introns Chi and SV40 are sequentially inserted into the optimized sequence one (SEQ ID NO: 7)
  • the transgene expression cassette B96 is constructed, Its nucleotide sequence is shown in SEQ ID NO:12.
  • the intron behind the promoter is VH4, and the SV40 intron is inserted into the optimized sequence one (SEQ ID NO: 7) to construct the transgenic expression cassette B97, its nucleotide sequence As shown in SEQ ID NO:13.
  • CB is used as the promoter
  • the intron behind the promoter is VH4
  • the two introns SV40 and Chi are sequentially inserted into the optimized sequence one (SEQ ID NO: 7) to construct the transgenic expression cassette B98, Its nucleotide sequence is shown in SEQ ID NO: 14.
  • the intron behind the promoter is SV40, and the transgenic expression cassette B126 of the original human interleukin-1 receptor antagonist protein coding nucleic acid sequence without codon optimization is constructed, and its nucleotide The sequence is shown in SEQ ID NO:15.
  • the intron behind the promoter is SV40, and the codon-optimized human interleukin 1 receptor antagonistic protein coding nucleic acid sequence (optimized sequence two (IL1Ra(2)), SEQ ID NO:8) the transgenic expression cassette B127, its nucleotide sequence is as shown in SEQ ID NO:16.
  • the intron after the promoter is SV40, and the Chi intron is inserted in the optimized sequence two (SEQ ID NO: 8) to construct the transgenic expression cassette B128, its nucleotide sequence As shown in SEQ ID NO:17.
  • the intron after the promoter is SV40
  • the Chi intron is inserted in the optimized sequence two (SEQ ID NO: 8) and the VH4 intron is connected at the end of the optimized sequence two , to construct a transgenic expression cassette B129, the nucleotide sequence of which is shown in SEQ ID NO: 18.
  • the intron behind the promoter is SV40, two introns Chi and VH4 are sequentially inserted into the optimized sequence 2 (SEQ ID NO: 8) to construct the transgenic expression cassette B130, Its nucleotide sequence is shown in SEQ ID NO: 19.
  • the intron behind the promoter is SV40, and the VH4 intron is inserted into the optimized sequence two (SEQ ID NO: 8) to construct the transgenic expression cassette B131, its nucleotide sequence As shown in SEQ ID NO:20.
  • the intron after the promoter is SV40
  • the VH4 intron is inserted in the optimized sequence two (SEQ ID NO: 8) and the Chi intron is connected at the end of the optimized sequence two , to construct a transgenic expression cassette B132, the nucleotide sequence of which is shown in SEQ ID NO: 21.
  • CB is used as the promoter
  • the intron behind the promoter is SV40
  • the two introns VH4 and Chi are sequentially inserted into the optimized sequence 2 (SEQ ID NO: 8) to construct the transgenic expression cassette B133, Its nucleotide sequence is shown in SEQ ID NO:22.
  • the transgenic expression cassette expressing interleukin 1 receptor antagonist protein comprises: CB promoter sequence (SEQ ID NO: 1), SV40 intron (SEQ ID NO: 3), bGH polyadenylation ( polyA) sequence (SEQ ID NO: 2) and codon-optimized human IL-1Ra coding sequence (SEQ ID NO: 8), the codon-optimized human IL-1Ra coding sequence is inserted with a Chi intron ( SEQ ID NO: 5) and VH4 intron (SEQ ID NO: 4) to enhance the expression of the protein, thus forming the B130 expression cassette (SEQ ID NO: 19).
  • the B130 expression cassette is flanked by a normal ITR and a shortened ITR to enable packaging of the B130 expression cassette into AAV particles as a self-complementary AAV vector.
  • AAV particles of IL-IRa are produced by three-plasmid (plasmid 1: cis-element plasmid; plasmid 2: AAV Rep/Cap plasmid; plasmid 3: helper plasmid) transfection of HEK293 cells.
  • Plasmid 1 cis-element plasmid with ITR (e.g., B130 expression cassette); Plasmid 2: with capsid AAV Rep/Cap plasmid of protein (for example, AAV843 capsid protein) coding sequence; Plasmid 3: a helper plasmid with adenoviral components, which can facilitate the replication, assembly and packaging of AAV virions.
  • ITR e.g., B130 expression cassette
  • Plasmid 2 with capsid AAV Rep/Cap plasmid of protein (for example, AAV843 capsid protein) coding sequence
  • Plasmid 3 a helper plasmid with adenoviral components, which can facilitate the replication, assembly and packaging of AAV virions.
  • AAV particles produced by HEK293 cells are purified by affinity chromatography and iodixanol density gradient ultracentrifugation (Xiao X et al., J Virol (1998) 72(3):2224-32).
  • Those skilled in the art can use known standard methods to produce recombinant and synthetic polypeptides or proteins thereof, design nucleic acid sequences, produce transformed cells, construct recombinant AAV mutants, transform capsid proteins, package and express AAV Rep and/or Cap sequences vector, and transiently or stably transfect packaging cells. These techniques are known to those skilled in the art. See, eg, MOLECULAR CLONING: A LABORATORY MANUAL, Second Edition, (Cold Spring Harbor, NY, 1989).
  • the gene delivery systems of the present disclosure are used to aid in cell transplantation therapy.
  • AAV particles with transgenes can be used to transduce various types of cells in vitro to generate stable cell lines expressing protein products, which can then be introduced in vivo for therapeutic purposes.
  • Types of cells include, but are not limited to, chondrocytes, synoviocytes, mesenchymal stem cells.
  • the cells used for transplantation are autologous cells of the subject, which allow for in vitro culture.
  • the principles and techniques of introducing or transplanting cells into a subject are known to those skilled in the art.
  • AAV particles are harvested from the culture medium and lysates of HEK293 cells. Purification methods such as affinity chromatography, ion exchange chromatography, cesium chloride and iodixanol gradient ultracentrifugation.
  • Chemicals or reagents related to AAV production and purification include, but are not limited to: Chemicals or reagents used in cell culture (e.g., components of cell culture media including bovine, equine, goat, chicken or other vertebrate serum, glutamine Amide, Glucose, Sucrose, Pyruvate sodium, phenol red; antibiotics such as penicillin, kanamycin, streptomycin, tetracycline); chemicals or reagents for cell lysis, polynucleotide precipitation or ultracentrifugation (such as Triton X-100, NP-40, Sodium deoxycholate, Sodium Lauryl Sulfate, Domiphene Bromide, Sodium Lauryl Salicylate, Sodium Chloride, Magnesium Chloride, Calcium Chloride, Barium Chloride, Nitrate, Potassium Chloride, Chloride Ammonium, Ammonium Persulfate, Ammonium Sulfate, PEG-20, PEG
  • the AAV vectors of the present disclosure can be loaded with exogenous polynucleotides for gene delivery into target cells.
  • the AAV vectors of the present disclosure can be used to deliver nucleic acids to cells in vitro or in vivo.
  • the exogenous polynucleotide delivered to the target cell by the AAV vector encodes a native protein for therapeutic use, either codon-optimized or non-codon-optimized.
  • the exogenous polynucleotide delivered by the AAV vector to the target cell encodes a synthetic polypeptide.
  • the AAV vector or transgene expression cassette or gene delivery system of the present disclosure is made into a pharmaceutical preparation (eg, injection) and administered to humans or other mammals.
  • pharmaceutical formulations may be delivered in single or multiple doses by systemic or local (eg, intravenous, intra-articular) administration.
  • the medicament of the present disclosure is used to transduce cells in vitro or mammals (such as rodents, primates and humans) in vivo to treat diseases that can be improved by blocking the IL-1 signaling pathway , such as acute inflammatory diseases, chronic inflammatory diseases and malignant tumors, preferably joint inflammation.
  • diseases that can be improved by blocking the IL-1 signaling pathway , such as acute inflammatory diseases, chronic inflammatory diseases and malignant tumors, preferably joint inflammation.
  • the joint inflammation is selected from the group consisting of osteoarthritis, rheumatoid arthritis, synovitis, hemophilic arthritis and other inflammatory joint inflammations. In one embodiment, joint inflammation involves degeneration of joint function.
  • treating or improving joint inflammatory disease refers to improving joint pain, cartilage wear and joint function in the treated patient.
  • Example 1 Codon optimization and plasmid construction of IL1Ra gene
  • IL1Ra optimized sequence one (IL1Ra(1 )) (SEQ ID NO: 7)
  • IL1Ra optimized sequence two IL1Ra(2)
  • plasmid B93 (SEQ ID NO: 9) was constructed with IL1Ra original sequence; with CB as promoter and VH4 as intron, plasmid B94 (SEQ ID NO: 9) was constructed with IL1Ra optimized sequence one NO: 10); with CB as the promoter, VH4 as the intron, and based on IL1Ra optimized sequence 1, Chi and/or SV40 introns were inserted at the 5' end and 3' end of the transcription unit to construct plasmids B95 to B98 (SEQ ID NO: 11 to SEQ ID NO: 14);
  • plasmid B126 (SEQ ID NO: 15) was constructed with the original sequence of IL1Ra; with CB as promoter and SV40 as intron, plasmid B127 (SEQ ID NO: 15) was constructed with the optimized sequence of IL1Ra NO: 16); with CB as the promoter and SV40 as the intron, based on IL1Ra optimized sequence 2, insert Chi and/or VH4 intron at the 5' end and 3' end of the transcription unit to construct plasmids B128 to B133 (SEQ ID NO: 17 to SEQ ID NO: 22).
  • Example 2 Expression of codon-optimized human IL1Ra-encoding nucleic acid sequence
  • Huh7 cells in a 12-well plate at a seeding density of 2E+5 cells/well, and replace serum-free DMEM when the cells increase to 80-90%.
  • Huh7 cells were transfected with five plasmids (B94-B98) with IL1Ra optimized sequence one, and the supernatant was collected 72 hours later to measure the concentration of IL1Ra protein.
  • the plasmid with IL1Ra optimized sequence 1 was packaged into AAV843 virus to infect Huh7 cells at an infection MOI of 7.5E+5vg/cell, and the supernatant was collected after 72 hours to measure the IL1Ra protein concentration.
  • FIG. 2B ELISA results showed ( FIG. 2B ) that the results of virus infection were basically consistent with those of plasmid transfection, and the expression of B96 virus was most significantly increased.
  • the B93 virus packaging the original sequence of IL1Ra and the B94 to B98 virus packaging IL1Ra optimized sequence 1 were injected into C57 mice through the tail vein at a dose of 1E+13vg/kg. Serum was extracted 3 weeks after injection, and the expression of IL1Ra was determined.
  • the expressions of the 6 plasmids (B128-B133) obtained by further optimizing by inserting Chi and/or VH4 introns were further improved, and the expression of the B130 plasmid increased most significantly (19.6 ng/ml), which was 13.9 times higher than that of the unoptimized original gene (B126), and about 1.9 times higher than that of the B127 plasmid without an intron inserted (Fig. 2D).
  • the plasmid with IL1Ra optimized sequence 2 was packaged into AAV843 virus to infect Huh7 cells at an infection MOI of 7.5E+5vg/cell, and the supernatant was collected after 48 hours to measure the IL1Ra protein concentration.
  • the B126 virus packaging the original sequence of IL1Ra and the B127 to B133 virus packaging the optimized sequence II of IL1Ra were injected into the tail vein of C57 mice, and the serum was extracted 3 and 4 weeks after the injection, and the expression of IL1Ra was determined.
  • B94 optimal sequence 1
  • B96 optimal sequence 1 + intron insertion
  • B127 optimal sequence 2
  • B130 optimal sequence Two + intron insertion
  • ELISA results showed that the expression of IL1Ra protein of B127 virus was significantly higher than that of B94 virus (Fig. 2H, **p ⁇ 0.01), and the expression of IL1Ra protein of B130 virus was also better than that of B96 virus, indicating that IL1Ra optimized sequence 2 has higher expression than IL1Ra optimized sequence 1 Higher IL1Ra protein expression.
  • Example 3 In vitro biological function of the codon-optimized IL1Ra gene
  • C28/I2 chondrocytes Under the stimulation of IL1, C28/I2 chondrocytes will undergo an inflammatory reaction, which will promote the production of inflammatory factors such as IL1, IL6, and TNFa, which in turn will cause the increase of cartilage matrix degrading enzyme MMP13, leading to the degradation of cartilage matrix.
  • C28/I2 chondrocytes were selected for verification.
  • C28/I2 cells were plated in 12-well plates at a seeding density of 2e5 cells/well. When the confluence reaches 80-90%, replace the serum-free medium, and the virus infection MOI is 7.5E+5vg/cell. After 24 hours of infection, the DMEM medium containing 10% fetal bovine serum was replaced. In addition to the blank control wells, a certain amount of IL1 (10ng/ml) was added to each well for stimulation and induction. After 48h, the cells were collected to extract mRNA, and the expression levels of IL1, IL6, TNFa and MMP13 were measured.
  • the results of the virus in vitro functional experiment for optimized sequence 1 showed that under the action of IL1, the levels of IL1, IL6, TNFa and MMP13 in the model group (6.4, 23.8, 2.1, 9.4, respectively) were significantly higher than those in the blank control group (1, 1 , 1, 1) (FIG. 3A).
  • Pre-infection with IL1Ra virus attenuated the stimulating effect of IL1, and the levels of IL1, IL6 and MMP13 were significantly reduced.
  • the B96 group had the best therapeutic effect, and the levels of IL1, IL6, TNFa and MMP13 were reduced to 1.9, 3.5, 1.9, and 2.3, respectively, which was consistent with the result of the highest expression (Figure 2B).
  • the results of the virus in vitro functional experiment for optimized sequence 2 showed that the levels of IL1, IL6, TNFa, and MMP13 in the B127 group were reduced to 2.5, 8.5, 1.3, and 4.6, respectively, which was better than that of the B126 virus group (5.0, 19.1, 1.7, 10.5). Under the same virus titer condition, the treatment effect of the B130 group was better, and the levels of IL1, IL6, TNFa and MMP13 were reduced to 2.1, 4.6, 1.0, and 3.3, respectively (Fig. 3B).
  • Example 4 The therapeutic effect of AAV-mediated expression of IL1Ra on arthritis
  • the Micro-CT machine was used to scan the joints of the rats to observe the therapeutic effect of the virus.
  • the results showed that compared with the model group, the joint surfaces of the rats treated in the low-dose group and the high-dose group were significantly smoother and more complete ( FIG. 5B ), and the effect of the high-dose group was better.
  • Analysis of trabecular bone parameters also showed that both the low-dose and high-dose groups of IL1Ra virus could effectively reduce the wear and tear of the joints of model rats (Fig. 5C), and had a certain protective effect on articular cartilage.
  • virus treatment could effectively reduce the expression of inflammatory factors such as IL1, IL6, and TNF ⁇ in the model joints, and reduce the production of cartilage matrix degrading enzymes, thereby inhibiting the reduction of cartilage matrix proteoglycan and type II collagen.
  • AAV843-B130 virus can express IL1Ra protein after intra-articular injection, effectively antagonize IL1 inflammatory factor, exert anti-inflammatory effect, effectively protect articular cartilage, and finally delay the pathogenesis of OA.
  • ALT alanine aminotransferase
  • AST aspartate aminotransferase
  • the results of ELISA showed that 1 week after the virus injection, the levels of ALT and AST in the liver function of the rats had no significant changes compared with those in the non-injected virus group ( FIG. 9A ).
  • the results of blood routine testing showed that the number of white blood cells (WBC), percentage of lymphocytes (Lymph), number of platelets (PLT), percentage of neutrophils (Gran), number of red blood cells (RBC) and hemoglobin ( HGB) and the non-injected virus group had no significant difference ( FIG. 9B ), which indicated that AAV virus had no obvious toxic and side effects on rats after joint injection.

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Abstract

The present invention relates to a nucleic acid molecule encoding an interleukin 1 receptor antagonist protein, a transgenic expression cassette comprising the nucleic acid molecule, a gene delivery system comprising the transgenic expression cassette and use thereof. The transgenic expression cassette and the gene delivery system of the present invention can be used to treat various diseases that can be improved by blocking the IL-1 signaling pathway, including malignant tumors and inflammatory diseases, such as arthritis, particularly osteoarthritis.

Description

白介素1受体拮抗蛋白的表达盒以及基于AAV的基因递送系统Expression cassette of interleukin-1 receptor antagonist protein and AAV-based gene delivery system 技术领域technical field
本公开涉及编码白介素1受体拮抗蛋白的核酸分子、包含该核酸分子的转基因表达盒、包含该转基因表达盒的基因递送系统及其应用。The present disclosure relates to a nucleic acid molecule encoding an interleukin-1 receptor antagonist protein, a transgene expression cassette comprising the nucleic acid molecule, a gene delivery system comprising the transgene expression cassette and applications thereof.
背景技术Background technique
白介素1(IL-1)是一个多效性的细胞因子,主要影响炎症和免疫反应,也调节机体其它生理功能,对疾病的发病机制有重要影响。IL-1在急性炎症疾病(如败血性休克)、慢性炎症疾病(如类风湿关节炎)和恶性肿瘤中的水平均升高。IL-1由巨噬细胞分泌,启动炎性反应。此外,研究表明,IL-1在肿瘤生成中起重要作用(Krelin Y等,Cancer Res,2007;67(3):1062–1071)。IL-1家族主要包括IL-1α和IL-1β。IL-1β在正常生理情况下不产生,只在炎性信号下分泌;而IL-1α在正常生理情况下存在于细胞质中和细胞膜上,在炎症发生时,它的表达水平升高(WU X等,Chinese journal of lung cancer,2010;13(12):1145-1148)。Interleukin-1 (IL-1) is a pleiotropic cytokine that mainly affects inflammation and immune response, and also regulates other physiological functions of the body, which has an important impact on the pathogenesis of diseases. IL-1 levels are elevated in acute inflammatory diseases (such as septic shock), chronic inflammatory diseases (such as rheumatoid arthritis) and malignant tumors. IL-1 is secreted by macrophages and initiates the inflammatory response. In addition, studies have shown that IL-1 plays an important role in tumorigenesis (Krelin Y et al., Cancer Res, 2007;67(3):1062-1071). The IL-1 family mainly includes IL-1α and IL-1β. IL-1β is not produced under normal physiological conditions, and is only secreted under inflammatory signals; while IL-1α exists in the cytoplasm and on the cell membrane under normal physiological conditions, and its expression level increases when inflammation occurs (WU X et al., Chinese journal of lung cancer, 2010; 13(12):1145-1148).
白介素1受体拮抗蛋白(IL-1Ra或IL1RA)是天然存在的IL-1β抑制蛋白分子,它可与细胞表面的IL1受体结合而不启动信号转导,从而竞争性阻断IL1的信号通路。将编码IL-1Ra的cDNA导入患者靶组织的细胞中,以实现目的蛋白IL-1Ra的表达,从而起到治疗作用。研究表明,重组的IL-1Ra可以减小鼠肿瘤的体积,抑制肿瘤介导的新血管生成(Bar D等,FASEB J.,2004;18(1):161–163)。Anakinra是一款已经上市的重组IL-1Ra,用于治疗骨性关节炎(OA),但由于药物半衰期短,难以维持有效的治疗浓度,因此它对于OA的治疗效果并不理想。此外,反复注射也会给患者带来诸多不便和痛苦。Interleukin 1 receptor antagonist protein (IL-1Ra or IL1RA) is a naturally occurring IL-1β inhibitory protein molecule, which can bind to the IL1 receptor on the cell surface without initiating signal transduction, thereby competitively blocking the IL1 signaling pathway . The cDNA encoding IL-1Ra is introduced into the cells of the target tissue of the patient to achieve the expression of the target protein IL-1Ra, thereby playing a therapeutic role. Studies have shown that recombinant IL-1Ra can reduce the volume of mouse tumors and inhibit tumor-mediated neovascularization (Bar D et al., FASEB J., 2004; 18(1):161-163). Anakinra is a recombinant IL-1Ra that has been marketed for the treatment of osteoarthritis (OA), but due to the short half-life of the drug, it is difficult to maintain an effective therapeutic concentration, so its therapeutic effect on OA is not ideal. In addition, repeated injections will also bring a lot of inconvenience and pain to patients.
骨性关节炎(OA)是一种常见的关节疾病。据统计,60岁以上的老年人群中男性约占比10%,而女性约18%,临床上主要表现为关节疼痛,僵直,严重甚至引起关节功能完全丧失,这给患者家庭和社会带来沉重的人力和财力负担。骨性关节炎的发病机制是复杂多样的,研究表明该疾病是由遗传、生物(包括衰老、炎症等)和生物力学等多种因素共同作用导致的,迄今为止还没有一种有效的治疗方法。Osteoarthritis (OA) is a common joint disease. According to statistics, males account for about 10% of the elderly population over 60 years old, while females account for about 18%. Clinically, the main manifestations are joint pain, stiffness, severe and even complete loss of joint function, which brings a heavy burden to the patient's family and society. human and financial burden. The pathogenesis of osteoarthritis is complex and diverse. Studies have shown that the disease is caused by multiple factors such as genetics, biology (including aging, inflammation, etc.) and biomechanics. So far, there is no effective treatment .
骨性关节炎发病过程中最常见的症状是产生滑膜炎症。关节炎症会引起促炎因子如白介素1(IL-1)、肿瘤坏死因子(TNFα)等的生成,进而加剧OA的发生发展。尽管OA的发病机制尚未阐明,但白介素-1作为促炎因子在骨性关节炎发展中起关键作用。在关节中, IL-1β是由软骨细胞、成骨细胞、滑膜细胞和单核细胞合成,并通过与膜受体IL-1受体(IL-1R)结合而发挥作用。另外,IL‐1β通过激活转录核因子κB(NF‐κB)、p38MAPK和c-Jun N-端激酶及其下游信号通路,减少软骨细胞中关键细胞外基质蛋白(II型胶原蛋白和蛋白聚糖)以及刺激基质降解蛋白酶(MMP-3和ADAMTS-4)的生成。IL‐1β还可以通过上调软骨细胞中Bcl‐2蛋白家族成员、线粒体去极化以及产生活性氧诱导软骨细胞的凋亡。因此,阻断IL-1的信号通路成为研究治疗OA的热门靶标。The most common symptom in the pathogenesis of osteoarthritis is synovial inflammation. Joint inflammation can cause the production of proinflammatory factors such as interleukin 1 (IL-1) and tumor necrosis factor (TNFα), which in turn aggravate the occurrence and development of OA. Although the pathogenesis of OA has not been elucidated, interleukin-1 plays a key role in the development of osteoarthritis as a pro-inflammatory factor. in the joint, IL-1β is synthesized by chondrocytes, osteoblasts, synoviocytes and monocytes, and exerts its effect by binding to the membrane receptor IL-1 receptor (IL-1R). In addition, IL‐1β reduces key extracellular matrix proteins (type II collagen and proteoglycan ) and stimulate the production of matrix-degrading proteases (MMP-3 and ADAMTS-4). IL-1β can also induce apoptosis of chondrocytes by up-regulating Bcl-2 protein family members in chondrocytes, mitochondrial depolarization and production of reactive oxygen species. Therefore, blocking the signaling pathway of IL-1 has become a popular target for the research and treatment of OA.
目前,许多病毒载体已被用于基因治疗,包括腺病毒、逆转录病毒、慢病毒以及腺相关病毒(AAV)。但逆转录病毒、慢病毒、腺病毒出于安全和技术等方面考虑并不适合大规模生产应用,而具有低免疫原性的AAV目前已得到了广泛认可。AAV具有较好的安全性和高效的感染效率,以及介导基因长期表达的特点。目前,已有AAV介导的基因治疗药物获得审批,AAV载体是较理想的基因治疗工具。Currently, many viral vectors have been used in gene therapy, including adenovirus, retrovirus, lentivirus, and adeno-associated virus (AAV). However, retroviruses, lentiviruses, and adenoviruses are not suitable for large-scale production applications due to safety and technical considerations, and AAV with low immunogenicity has been widely recognized. AAV has good safety and high infection efficiency, as well as the characteristics of mediating long-term gene expression. At present, AAV-mediated gene therapy drugs have been approved, and AAV vectors are ideal gene therapy tools.
尽管AAV具有较低的免疫原性,但临床上常报道系统性给药AAV后会引发的较重免疫反应,这大部分是由于使用较高的剂量所引起的。对于OA,关节腔局部注射病毒载体能有效避开系统性给药引起的不良反应。通过增加转录的蛋白表达水平,可以降低病毒载体用量,并保持高水平的外源基因表达。Although AAV has low immunogenicity, it is often reported clinically that systemic administration of AAV will trigger a severe immune response, which is mostly caused by the use of higher doses. For OA, local injection of viral vectors into the joint cavity can effectively avoid adverse reactions caused by systemic administration. By increasing the level of transcribed protein expression, the amount of viral vector can be reduced and high levels of foreign gene expression can be maintained.
因此,为了更有效地阻断IL1的信号通路,从而实现对恶性肿瘤和/或炎症疾病(如关节炎症,特别是骨性关节炎)更好的治疗效果,期望获得表达水平更高的IL-1Ra编码序列以及表达盒。Therefore, in order to more effectively block the signaling pathway of IL1, so as to achieve a better therapeutic effect on malignant tumors and/or inflammatory diseases (such as joint inflammation, especially osteoarthritis), it is expected to obtain IL-1 with a higher expression level. 1Ra coding sequence and expression cassette.
发明内容Contents of the invention
为了解决上述技术问题,在第一方面,本公开提供一种编码白介素1受体拮抗蛋白的核酸分子,其核苷酸序列与SEQ ID NO:7或SEQ ID NO:8所示的核苷酸序列具有至少50%的同一性,优选具有至少60%、70%、80%、85%、90%、95%、99%或100%的同一性。In order to solve the above technical problems, in the first aspect, the present disclosure provides a nucleic acid molecule encoding an interleukin 1 receptor antagonist protein, the nucleotide sequence of which is the same as that shown in SEQ ID NO: 7 or SEQ ID NO: 8 The sequences are at least 50% identical, preferably at least 60%, 70%, 80%, 85%, 90%, 95%, 99% or 100% identical.
在一个实施方式中,核酸分子包含SEQ ID NO:7或SEQ ID NO:8所示的核苷酸序列。在一个优选实施方式中,核酸分子的核苷酸序列如SEQ ID NO:7或SEQ ID NO:8所示。In one embodiment, the nucleic acid molecule comprises the nucleotide sequence shown in SEQ ID NO: 7 or SEQ ID NO: 8. In a preferred embodiment, the nucleotide sequence of the nucleic acid molecule is shown in SEQ ID NO: 7 or SEQ ID NO: 8.
本公开的编码人源白介素1受体拮抗蛋白的核酸分子包含经密码子优化的人源白介素1受体拮抗蛋白编码核酸序列(SEQ ID NO:7或SEQ ID NO:8),与未经密码子优化的原始人源白介素1受体拮抗蛋白编码核酸序列(SEQ ID NO:6)相比,经密码子优化的人源白介素1受体拮抗蛋白编码核酸序列(SEQ ID NO:7或SEQ ID NO:8)具有更高的白 介素1受体拮抗蛋白表达水平。The nucleic acid molecule encoding the human interleukin 1 receptor antagonist protein of the present disclosure comprises a codon-optimized human interleukin 1 receptor antagonist protein coding nucleic acid sequence (SEQ ID NO: 7 or SEQ ID NO: 8), and an uncoded Compared with the original human interleukin 1 receptor antagonist protein encoding nucleic acid sequence (SEQ ID NO: 6) optimized by codon, the human interleukin 1 receptor antagonist protein encoding nucleic acid sequence (SEQ ID NO: 7 or SEQ ID NO: 7) through codon optimization NO: 8) has a higher white Interlein 1 receptor antagonist protein expression level.
在第二方面,本公开提供一种转基因表达盒,其包括:启动子、根据第一方面所述的核酸分子、polyA。In the second aspect, the present disclosure provides a transgene expression cassette, which includes: a promoter, the nucleic acid molecule according to the first aspect, and polyA.
在一个优选实施方式中,polyA为bGH polyA(SEQ ID NO:2)。In a preferred embodiment, polyA is bGH polyA (SEQ ID NO: 2).
在一个实施方式中,启动子选自:CB启动子、CAG启动子、SV40启动子、胶原蛋白collagen启动子、蛋白聚糖aggrecan启动子、滑膜蛋白基因启动子、脂肪组织特异性启动子PPAR白基因启动子、转录因子SOX9启动子和骨钙蛋白启动子。在一个优选实施方式中,启动子为CB启动子(SEQ ID NO:1)。In one embodiment, the promoter is selected from: CB promoter, CAG promoter, SV40 promoter, collagen collagen promoter, proteoglycan aggrecan promoter, synoviolin gene promoter, adipose tissue specific promoter PPAR white gene promoter, transcription factor SOX9 promoter and osteocalcin promoter. In a preferred embodiment, the promoter is a CB promoter (SEQ ID NO: 1).
在一个实施方式中,转基因表达盒还包括:位于启动子之后的内含子(简称为启动子后内含子),和/或位于两端的两个ITR,所述两个ITR各自独立地为正常ITR或缩短ITR。在一个优选实施方式中,位于启动子之后的内含子选自:SV40内含子(SEQ ID NO:3)、VH4内含子(SEQ ID NO:4)、Chi内含子(SEQ ID NO:5)、U12内含子、RHD内含子等1类内含子。在一个更优选实施方式中,位于启动子之后的内含子为SV40或VH4。In one embodiment, the transgene expression cassette further includes: an intron located behind the promoter (abbreviated as an intron after the promoter), and/or two ITRs located at both ends, the two ITRs are each independently Normal ITR or shortened ITR. In a preferred embodiment, the intron behind the promoter is selected from the group consisting of: SV40 intron (SEQ ID NO: 3), VH4 intron (SEQ ID NO: 4), Chi intron (SEQ ID NO : 5), U12 intron, RHD intron and other class 1 introns. In a more preferred embodiment, the intron following the promoter is SV40 or VH4.
在一个优选实施方式中,启动子为CB启动子,位于启动子之后的内含子为VH4。在一个优选实施方式中,启动子为CB启动子,位于启动子之后的内含子为SV40。In a preferred embodiment, the promoter is a CB promoter, and the intron behind the promoter is VH4. In a preferred embodiment, the promoter is a CB promoter, and the intron behind the promoter is SV40.
在一个实施方式中,转基因表达盒还包括:插入至根据第一方面所述的核酸分子中的至少一个(例如,1个或2个)内含子。在一个优选实施方式中,插入的内含子选自:SV40内含子、VH4内含子和Chi内含子。本发明人发现,插入这样的内含子可以更好地提高目的蛋白质(白介素1受体拮抗蛋白)的表达和分泌。In one embodiment, the transgene expression cassette further comprises: at least one (eg, 1 or 2) introns inserted into the nucleic acid molecule according to the first aspect. In a preferred embodiment, the inserted intron is selected from the group consisting of: SV40 intron, VH4 intron and Chi intron. The inventors found that inserting such an intron can better enhance the expression and secretion of the target protein (interleukin-1 receptor antagonist protein).
在一个实施方式中,转基因表达盒的核苷酸序列如SEQ ID NO:10、SEQ ID NO:11、SEQ ID NO:12、SEQ ID NO:13、SEQ ID NO:14、SEQ ID NO:16、SEQ ID NO:17、SEQ ID NO:18、SEQ ID NO:19、SEQ ID NO:20、SEQ ID NO:21或SEQ ID NO:22所示,优选SEQ ID NO:12和SEQ ID NO:19,更优选SEQ ID NO:19。In one embodiment, the nucleotide sequence of the transgenic expression cassette is such as SEQ ID NO: 10, SEQ ID NO: 11, SEQ ID NO: 12, SEQ ID NO: 13, SEQ ID NO: 14, SEQ ID NO: 16 , SEQ ID NO: 17, SEQ ID NO: 18, SEQ ID NO: 19, SEQ ID NO: 20, SEQ ID NO: 21 or SEQ ID NO: 22, preferably SEQ ID NO: 12 and SEQ ID NO: 19, more preferably SEQ ID NO: 19.
在第三方面,本公开提供一种基因递送系统,其包括:根据第二方面所述的转基因表达盒和AAV衣壳蛋白。In a third aspect, the present disclosure provides a gene delivery system, which includes: the transgene expression cassette according to the second aspect and AAV capsid protein.
在一个实施方式中,上述AAV衣壳蛋白为天然AAV衣壳蛋白或人工改造的AAV衣壳蛋白。在一个优选实施方式中,AAV选自:AAV1、AAV2、AAV3、AAV4、AAV5、AAV6、AAV7、AAV8、AAV9、AAV10、AAV11,AAV12、AAV-DJ和AAV843。在一个更优选实施方式中,AAV衣壳蛋白为AAV843,其氨基酸序列如SEQ ID NO:24所示。In one embodiment, the above-mentioned AAV capsid protein is a natural AAV capsid protein or an artificially modified AAV capsid protein. In a preferred embodiment, the AAV is selected from the group consisting of: AAV1, AAV2, AAV3, AAV4, AAV5, AAV6, AAV7, AAV8, AAV9, AAV10, AAV11, AAV12, AAV-DJ and AAV843. In a more preferred embodiment, the AAV capsid protein is AAV843, and its amino acid sequence is shown in SEQ ID NO: 24.
本公开的转基因表达盒和基因递送系统可以表达更高水平的白介素1受体拮抗蛋白 (IL1RA),从而阻断IL-1的信号通路,实现对恶性肿瘤以及炎症疾病(如关节炎症,特别是骨性关节炎)更好的治疗效果。此外,本公开的基因递送系统可以实现治疗性蛋白质的长效稳定递送。The transgene expression cassette and gene delivery system of the present disclosure can express higher levels of interleukin-1 receptor antagonist protein (IL1RA), thereby blocking the signaling pathway of IL-1, and achieving better therapeutic effects on malignant tumors and inflammatory diseases (such as joint inflammation, especially osteoarthritis). In addition, the gene delivery system of the present disclosure can achieve long-term stable delivery of therapeutic proteins.
在第四方面,本公开提供根据第一方面所述的核酸分子、根据第二方面所述的转基因表达盒或根据第三方面所述的基因递送系统在制备用于治疗疾病的药物中的应用,所述疾病为可通过阻断IL-1信号通路而改善的疾病,如急性炎症疾病、慢性炎症疾病和恶性肿瘤。In a fourth aspect, the present disclosure provides the use of the nucleic acid molecule according to the first aspect, the transgene expression cassette according to the second aspect, or the gene delivery system according to the third aspect in the preparation of a drug for treating a disease , the disease is a disease that can be improved by blocking IL-1 signaling pathway, such as acute inflammatory disease, chronic inflammatory disease and malignant tumor.
在一个优选实施方式中,疾病为关节炎症,包括骨性关节炎(OA)、类风湿关节炎(RA)、滑膜炎、血友病关节炎和其他炎症引起的关节炎症。In a preferred embodiment, the disease is joint inflammation, including osteoarthritis (OA), rheumatoid arthritis (RA), synovitis, hemophilic arthritis and other inflammatory joint inflammations.
在一个更优选实施方式中,疾病为骨性关节炎(OA)。In a more preferred embodiment, the disease is osteoarthritis (OA).
在第五方面,本公开提供一种药物,其包含:根据第一方面所述的核酸分子、根据第二方面所述的转基因表达盒或根据第三方面所述的基因递送系统;以及赋形剂。In the fifth aspect, the present disclosure provides a medicine, which comprises: the nucleic acid molecule according to the first aspect, the transgene expression cassette according to the second aspect, or the gene delivery system according to the third aspect; and excipient agent.
在一个实施方式中,赋形剂包括盐、有机物和/或表面活性剂。In one embodiment, excipients include salts, organics and/or surfactants.
在一个实施方式中,药物用于治疗可通过阻断IL-1信号通路而改善的疾病。在一个优选实施方式中,疾病为急性炎症疾病、慢性炎症疾病和/或恶性肿瘤。在一个更优选实施方式中,疾病为关节炎症,包括骨性关节炎(OA)、类风湿关节炎(RA)、滑膜炎、血友病关节炎和其他炎症引起的关节炎症。In one embodiment, the medicament is used to treat a disease that can be improved by blocking the IL-1 signaling pathway. In a preferred embodiment, the disease is an acute inflammatory disease, a chronic inflammatory disease and/or a malignant tumor. In a more preferred embodiment, the disease is joint inflammation, including joint inflammation caused by osteoarthritis (OA), rheumatoid arthritis (RA), synovitis, hemophilic arthritis and other inflammatory conditions.
在第六方面,本公开提供一种治疗疾病的方法,包括向有需要的受试者施用治疗有效量的根据第五方面所述的药物,所述疾病选自急性炎症疾病、慢性炎症疾病和恶性肿瘤。In a sixth aspect, the present disclosure provides a method for treating a disease, comprising administering a therapeutically effective amount of the drug according to the fifth aspect to a subject in need, the disease being selected from acute inflammatory diseases, chronic inflammatory diseases and Malignant tumor.
在一个优选实施方式中,疾病为关节炎症,包括骨性关节炎(OA)、类风湿关节炎(RA)、滑膜炎、血友病关节炎和其他炎症引起的关节炎症。In a preferred embodiment, the disease is joint inflammation, including osteoarthritis (OA), rheumatoid arthritis (RA), synovitis, hemophilic arthritis and other inflammatory joint inflammations.
在一个更优选实施方式中,疾病为骨性关节炎(OA)。In a more preferred embodiment, the disease is osteoarthritis (OA).
在一个实施方式中,药物通过全身途径或局部途径施用,例如静脉内施用、局部接触和病灶内施用,优选局部施用于关节腔,例如通过关节腔注射。In one embodiment, the drug is administered systemically or locally, such as intravenous administration, topical contact, and intralesional administration, preferably locally to the joint cavity, such as intra-articular injection.
在第七方面,本公开提供一种工程化的AAV衣壳蛋白(AAV843),其中,所述AAV衣壳蛋白的氨基酸序列如SEQ ID NO:24所示。In a seventh aspect, the present disclosure provides an engineered AAV capsid protein (AAV843), wherein the amino acid sequence of the AAV capsid protein is shown in SEQ ID NO: 24.
在第八方面,本公开提供一种核酸分子,其编码根据第七方面所述的AAV843衣壳蛋白。在一个实施方式中,核酸分子的核苷酸序列如SEQ ID NO:23所示。In an eighth aspect, the present disclosure provides a nucleic acid molecule encoding the AAV843 capsid protein according to the seventh aspect. In one embodiment, the nucleotide sequence of the nucleic acid molecule is shown in SEQ ID NO: 23.
在一个实施方式中,由本公开的AAV衣壳蛋白包装的AAV载体包含外源多核苷酸,所述外源多核苷酸包含编码治疗性蛋白质的核苷酸序列。在一个实施方式中,治疗性蛋白质为具有阻断IL1信号通路作用的蛋白质。在一个实施方式中,治疗性蛋白质为白介素1 受体拮抗蛋白。在一个实施方式中,外源多核苷酸包含编码白介素1受体拮抗蛋白的核苷酸序列。In one embodiment, an AAV vector packaged with an AAV capsid protein of the present disclosure comprises an exogenous polynucleotide comprising a nucleotide sequence encoding a therapeutic protein. In one embodiment, the therapeutic protein is a protein that blocks the IL1 signaling pathway. In one embodiment, the therapeutic protein is interleukin 1 receptor antagonist protein. In one embodiment, the exogenous polynucleotide comprises a nucleotide sequence encoding an interleukin-1 receptor antagonist protein.
附图说明Description of drawings
图1是B93、B94、B95、B96、B97、B98、B126、B127、B128、B129、B130、B131、B132和B133表达盒的示意图。Figure 1 is a schematic diagram of the B93, B94, B95, B96, B97, B98, B126, B127, B128, B129, B130, B131, B132 and B133 expression cassettes.
图2A显示了B94、B95、B96、B97和B98表达盒转染Huh7细胞72h后细胞分泌上清液中的IL1RA表达水平,ELISA检测结果。n=3,*p<0.05,t检验。Fig. 2A shows the expression level of IL1RA in the cell secreted supernatant after transfection of B94, B95, B96, B97 and B98 expression cassettes to Huh7 cells for 72 hours, and the results of ELISA detection. n=3, *p<0.05, t-test.
图2B显示了B94、B95、B96、B97和B98表达盒用AAV843衣壳包装后感染Huh7细胞72h后细胞分泌上清中的IL1RA表达水平,MOI=7E+5vg/细胞,ELISA检测结果。n=3,**p<0.01,t检验。Figure 2B shows the expression level of IL1RA in the cell secreted supernatant after B94, B95, B96, B97 and B98 expression cassettes were packaged with AAV843 capsid and infected Huh7 cells for 72 hours, MOI=7E+5vg/cell, ELISA detection results. n=3, **p<0.01, t-test.
图2C显示了B93、B94、B95、B96、B97和B98表达盒用AAV843衣壳包装后,小鼠尾静脉注射病毒,3周后小鼠血清中的IL1RA表达水平,剂量为1E+13vg/kg,ELISA检测结果。n=3,*p<0.05,t检验。Figure 2C shows the expression level of IL1RA in mouse serum after 3 weeks after B93, B94, B95, B96, B97, and B98 expression cassettes were packaged with AAV843 capsids, and the mice were injected with the virus through the tail vein. The dose was 1E+13vg/kg , ELISA test results. n=3, *p<0.05, t-test.
图2D显示了B126、B127、B128、B129、B130、B131、B132和B133表达盒转染Huh7细胞72h后细胞分泌上清液中的IL1RA表达水平,ELISA检测结果。n=3,*p<0.05,t检验。Figure 2D shows the expression level of IL1RA in the cell secreted supernatant after the B126, B127, B128, B129, B130, B131, B132 and B133 expression cassettes were transfected to Huh7 cells for 72 hours, and the ELISA detection results. n=3, *p<0.05, t-test.
图2E显示了B126、B127、B128、B129、B130、B131、B132和B133表达盒用AAV843衣壳包装后感染Huh7细胞72h后细胞分泌上清中的IL1RA表达水平,MOI=7E+5vg/细胞,ELISA检测结果。n=3,*p<0.05,t检验。Figure 2E shows the expression level of IL1RA in the cell secreted supernatant after the B126, B127, B128, B129, B130, B131, B132 and B133 expression cassettes were packaged with AAV843 capsids and infected with Huh7 cells for 72 hours, MOI=7E+5vg/cell, ELISA test results. n=3, *p<0.05, t-test.
图2F显示了B126、B127、B128、B129、B130、B131、B132和B133表达盒用AAV843衣壳包装后,小鼠尾静脉注射病毒,3周后小鼠血清中的IL1RA表达水平,剂量为1E+13vg/kg,ELISA检测结果。n=3,*p<0.05,t检验。Figure 2F shows the expression level of IL1RA in the mouse serum after 3 weeks after B126, B127, B128, B129, B130, B131, B132 and B133 expression cassettes were packaged with AAV843 capsid, and the virus was injected into the tail vein of mice, with a dose of 1E +13vg/kg, ELISA test result. n=3, *p<0.05, t-test.
图2G显示了B126、B127、B128、B129、B130、B131、B132和B133表达盒用AAV843衣壳包装后,小鼠尾静脉注射病毒,4周后小鼠血清中的IL1RA表达水平,剂量为1E+13vg/kg,ELISA检测结果。n=3,*p<0.05,t检验。Figure 2G shows the expression level of IL1RA in mouse serum after 4 weeks after B126, B127, B128, B129, B130, B131, B132, and B133 expression cassettes were packaged with AAV843 capsids, and the virus was injected into the tail vein of mice at a dose of 1E +13vg/kg, ELISA test result. n=3, *p<0.05, t-test.
图2H示出了B94、B96、B127、B130表达盒IL1RA表达水平的比较结果。表达盒用AAV843衣壳包装后感染Huh7细胞72h后,测定细胞分泌上清液中的IL1RA表达水平,MOI=7E+5vg/细胞,ELISA检测结果。n=3,**p<0.01,t检验。Fig. 2H shows the comparison results of IL1RA expression levels of B94, B96, B127, B130 expression cassettes. After the expression cassette was packaged with AAV843 capsid and infected Huh7 cells for 72 hours, the expression level of IL1RA in the cell secretion supernatant was measured, MOI=7E+5vg/cell, and the results were detected by ELISA. n=3, **p<0.01, t-test.
图3A显示了B93、B94、B95、B96、B97和B98表达盒对IL1β诱导的炎症因子和软 骨外基质降解蛋白酶水平升高的抑制作用。表达盒用AAV843衣壳包装后预先感染C28/I2细胞(MOI=7E+5vg/细胞),IL1β诱导48h后,qPCR检测IL1、IL6、TNFα和MMP13的mRNA表达水平。n=3,*p<0.05,**p<0.01,t检验。Figure 3A shows the effects of B93, B94, B95, B96, B97 and B98 expression cassettes on IL1β-induced inflammatory factors and soft Inhibition of elevated levels of extraosseous matrix-degrading proteases. The expression cassette was packaged with AAV843 capsid and pre-infected C28/I2 cells (MOI=7E+5vg/cell). After IL1β induction for 48h, the mRNA expression levels of IL1, IL6, TNFα and MMP13 were detected by qPCR. n=3, *p<0.05, **p<0.01, t-test.
图3B显示了B126、B127、B128、B129、B130、B131、B132和B133表达盒对IL1β诱导的炎症因子和软骨外基质降解蛋白酶水平升高的抑制作用。表达盒用AAV843衣壳包装后预先感染C28/I2细胞(MOI=7E+5vg/细胞),IL1β诱导48h后,qPCR检测IL1、IL6和TNFα和MMP13的mRNA表达水平。n=3,*p<0.05,t检验。Figure 3B shows the inhibitory effects of B126, B127, B128, B129, B130, B131, B132 and B133 expression cassettes on IL1β-induced increase in the levels of inflammatory factors and extrachondral matrix degrading proteases. The expression cassette was packaged with AAV843 capsid and pre-infected C28/I2 cells (MOI=7E+5vg/cell). After IL1β induction for 48 hours, the mRNA expression levels of IL1, IL6, TNFα and MMP13 were detected by qPCR. n=3, *p<0.05, t-test.
图4显示了通过剪交叉韧带与摘除部分半月板手术诱导骨性关节炎的大鼠模型图。造模2周后向SD大鼠关节腔内分别注射剂量为1×1011vg/关节和1×1012vg/关节的AAV颗粒,该颗粒具有AAV843衣壳且包装了B130表达盒。病毒注射后第0、2、4、8周,测量大鼠的关节肿胀度。病毒注射后第2、4、8周采血,测量大鼠血清的炎症水平。病毒注射后第8周,通过micro-CT对大鼠病变关节部位进行扫描拍摄。最后对大鼠实行安乐死,取关节,用于石蜡切片进行免疫组化,并提取mRNA进行qPCR测定。Figure 4 shows a rat model of osteoarthritis induced by shearing of the cruciate ligament and removal of part of the meniscus. Two weeks after modeling, SD rats were injected with AAV particles at a dose of 1×10 11 vg/joint and 1×10 12 vg/joint respectively. The particles had AAV843 capsid and packaged B130 expression cassette. At 0, 2, 4, and 8 weeks after virus injection, the joint swelling of the rats was measured. Blood was collected at 2, 4, and 8 weeks after virus injection to measure the inflammation level of rat serum. Eight weeks after virus injection, the lesioned joints of the rats were scanned and photographed by micro-CT. Finally, the rats were euthanized, and the joints were taken for paraffin sections for immunohistochemistry, and mRNA was extracted for qPCR determination.
图5A显示了具有AAV843衣壳且包装了B130表达盒的AAV病毒颗粒(AAV843-B130)关节腔注射OA大鼠模型后第0、2、4、8周,大鼠关节肿胀度的测量结果,n=4。Figure 5A shows the measurement results of rat joint swelling at 0, 2, 4, and 8 weeks after intra-articular injection of AAV virus particles (AAV843-B130) with AAV843 capsid and packaged B130 expression cassette into the OA rat model, n=4.
图5B显示了AAV843-B130病毒颗粒关节腔注射OA大鼠模型后第8周的micro-CT扫描结果,n=3。Fig. 5B shows the micro-CT scanning results at week 8 after intra-articular injection of AAV843-B130 virus particles into the OA rat model, n=3.
图5C显示了micro-CT扫描的骨参数分析统计图。平均值±sd,n=3,*P<0.05。Figure 5C shows the statistical graph of bone parameter analysis of micro-CT scans. Mean±s.d., n=3, *P<0.05.
图6显示了AAV843-B130病毒颗粒关节腔注射OA大鼠模型后第2、4、8周,大鼠的血清中炎症水平的ELISA检测结果,n=4。Figure 6 shows the results of ELISA detection of inflammation levels in serum of rats at 2, 4, and 8 weeks after intra-articular injection of AAV843-B130 virus particles into the OA rat model, n=4.
图7显示了AAV843-B130病毒颗粒关节腔注射OA大鼠模型后,大鼠的关节病理切片结果。番红-O和HE染色,n=3,比例尺:200微米。Figure 7 shows the results of pathological sections of the joints of the rats after intra-articular injection of AAV843-B130 virus particles into the OA rat model. Safranin-O and HE staining, n = 3, scale bar: 200 μm.
图8显示了AAV843-B130病毒颗粒关节腔注射OA大鼠模型后第8周,关节提取mRNA对目的蛋白、炎症因子、降解酶以及软骨基质蛋白的表达水平进行qPCR的检测结果。n=3,*p<0.05,**p<0.01,t检验。LD:低剂量;HD:高剂量。Figure 8 shows the results of qPCR detection of the expression levels of target proteins, inflammatory factors, degrading enzymes and cartilage matrix proteins by extracting mRNA from the joints at 8 weeks after intra-articular injection of AAV843-B130 virus particles into the OA rat model. n=3, *p<0.05, **p<0.01, t-test. LD: low dose; HD: high dose.
图9A和图9B显示了AAV843-B130病毒颗粒关节腔注射OA大鼠模型的安全性评价。n=3,*p<0.05,t检验。Figure 9A and Figure 9B show the safety evaluation of the OA rat model injected with AAV843-B130 virus particles intra-articularly. n=3, *p<0.05, t-test.
图10显示密码子优化的人源白介素1受体拮抗蛋白编码核酸优化序列一(SEQ ID NO:7)。Figure 10 shows codon-optimized human interleukin-1 receptor antagonist protein encoding nucleic acid optimized sequence one (SEQ ID NO: 7).
图11显示密码子优化的人源白介素1受体拮抗蛋白编码核酸优化序列二(SEQ ID NO: 8)。Figure 11 shows codon-optimized human interleukin 1 receptor antagonist protein encoding nucleic acid optimized sequence two (SEQ ID NO: 8).
图12显示B94表达盒的核苷酸序列(SEQ ID NO:10)。Figure 12 shows the nucleotide sequence (SEQ ID NO: 10) of the B94 expression cassette.
图13显示B95表达盒的核苷酸序列(SEQ ID NO:11)。Figure 13 shows the nucleotide sequence (SEQ ID NO: 11) of the B95 expression cassette.
图14显示B96表达盒的核苷酸序列(SEQ ID NO:12)。Figure 14 shows the nucleotide sequence (SEQ ID NO: 12) of B96 expression cassette.
图15显示B97表达盒的核苷酸序列(SEQ ID NO:13)。Figure 15 shows the nucleotide sequence (SEQ ID NO: 13) of the B97 expression cassette.
图16显示B98表达盒的核苷酸序列(SEQ ID NO:14)。Figure 16 shows the nucleotide sequence (SEQ ID NO: 14) of the B98 expression cassette.
图17显示B127表达盒的核苷酸序列(SEQ ID NO:16)。Figure 17 shows the nucleotide sequence (SEQ ID NO: 16) of B127 expression cassette.
图18显示B128表达盒的核苷酸序列(SEQ ID NO:17)。Figure 18 shows the nucleotide sequence (SEQ ID NO: 17) of the B128 expression cassette.
图19显示B129表达盒的核苷酸序列(SEQ ID NO:18)。Figure 19 shows the nucleotide sequence (SEQ ID NO: 18) of the B129 expression cassette.
图20显示B130表达盒的核苷酸序列(SEQ ID NO:19)。Figure 20 shows the nucleotide sequence (SEQ ID NO: 19) of the B130 expression cassette.
图21显示B131表达盒的核苷酸序列(SEQ ID NO:20)。Figure 21 shows the nucleotide sequence (SEQ ID NO: 20) of the B131 expression cassette.
图22显示B132表达盒的核苷酸序列(SEQ ID NO:21)。Figure 22 shows the nucleotide sequence (SEQ ID NO: 21) of the B132 expression cassette.
图23显示B133表达盒的核苷酸序列(SEQ ID NO:22)。Figure 23 shows the nucleotide sequence (SEQ ID NO: 22) of the B133 expression cassette.
图24显示编码AAV843衣壳蛋白的核苷酸序列(SEQ ID NO:23)。Figure 24 shows the nucleotide sequence (SEQ ID NO: 23) encoding AAV843 capsid protein.
图25显示AAV843衣壳蛋白的氨基酸序列(SEQ ID NO:24)。Figure 25 shows the amino acid sequence of the AAV843 capsid protein (SEQ ID NO: 24).
具体实施方式Detailed ways
除非另有定义,否则本文使用的所有技术和科学术语具有与本公开所属领域的普通技术人员的通常理解相同的含义。Unless otherwise defined, all technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the art to which this disclosure belongs.
除非另有说明,否则本文列出的核酸或多核苷酸序列是单链形式,方向是从5'至3',从左至右。本文提供的核苷酸和氨基酸采用IUPACIUB生化命名委员会建议的格式,对于氨基酸采用单字母代码或三字母代码。Unless otherwise indicated, nucleic acid or polynucleotide sequences listed herein are in single-stranded form, oriented 5' to 3', left to right. Nucleotides and amino acids are presented herein using the format recommended by the IUPACIUB Biochemical Nomenclature Commission, using either the single-letter code or the three-letter code for the amino acids.
除非另有说明,“多核苷酸”是“核酸”的同义词,指任何长度的核苷酸的聚合形式,包括脱氧核糖核苷酸或核糖核苷酸,它们的混合序列或类似物。多核苷酸可以包括修饰的核苷酸,例如甲基化或限制的核苷酸和核苷酸类似物。Unless otherwise stated, "polynucleotide" is synonymous with "nucleic acid" and refers to a polymeric form of nucleotides of any length, including deoxyribonucleotides or ribonucleotides, mixed sequences thereof, or the like. A polynucleotide may include modified nucleotides, such as methylated or restricted nucleotides and nucleotide analogs.
在本文中,术语“包含”、“具有”、“包括”和“含有”应被解释为开放式术语(即意味着“包括但不限于”)。As used herein, the terms "comprising," "having," "including," and "containing" are to be construed as open-ended terms (ie, meaning "including but not limited to").
在本文中,术语“患者”和“受试者”可互换使用并且以其常规意义使用,指患有或容易患有可通过施用本公开的药物进行预防或治疗的病症的生物体,并且包括人和非人动物(例如,啮齿动物或其他哺乳动物)。As used herein, the terms "patient" and "subject" are used interchangeably and in their conventional sense to refer to an organism suffering from or susceptible to a condition that can be prevented or treated by administering the medicaments of the present disclosure, and Humans and non-human animals (eg, rodents or other mammals) are included.
在一个实施方式中,受试者是非人动物(例如,黑猩猩和其他猿和猴物种;农场动物, 如牛、绵羊、猪、山羊和马;家养哺乳动物,例如狗和猫;实验动物包括啮齿类动物,如小鼠、大鼠和豚鼠;禽类,包括家禽、野禽和猎禽,如鸡、火鸡和其他鸡类、鸭、鹅等)。在一个实施方式中,受试者是哺乳动物。在一个实施方式中,受试者是人。In one embodiment, the subject is a non-human animal (e.g., chimpanzees and other ape and monkey species; farm animals, Such as cattle, sheep, pigs, goats and horses; domestic mammals such as dogs and cats; laboratory animals including rodents such as mice, rats and guinea pigs; chickens and other chickens, ducks, geese, etc.). In one embodiment, the subject is a mammal. In one embodiment, the subject is a human.
在本文中,术语“治疗”包括:(1)抑制病状、疾病或者病症,即,阻止、减少或者延迟疾病的发展或其复发或者其至少一种临床或者亚临床症状的发展;或者(2)缓解疾病,即,引起病状、疾病或者病症或者其临床或者亚临床症状中的至少一种消退。As used herein, the term "treating" includes: (1) inhibiting the condition, disease or disorder, i.e., arresting, reducing or delaying the development of the disease or its recurrence or the development of at least one clinical or subclinical symptom thereof; or (2) Ameliorating a disease, ie, causing regression of at least one of a condition, disease or disorder, or clinical or subclinical symptoms thereof.
在本文中,术语“治疗有效量”指产生施用它要达到的治疗效果的剂量。例如,适用于治疗关节炎症疾病的药物的治疗有效量可为能够预防或改善与该关节炎症疾病相关的一种或多种症状的量。As used herein, the term "therapeutically effective amount" refers to a dose that produces the therapeutic effect for which it is administered. For example, a therapeutically effective amount of a drug suitable for treating an inflammatory disease of the joint may be an amount capable of preventing or ameliorating one or more symptoms associated with the inflammatory disease of the joint.
在本文中,术语“改善”指与疾病有关的症状的改善,并且可以指至少一种衡量或定量该症状的参数的改善。As used herein, the term "amelioration" refers to an amelioration of a symptom associated with a disease, and may refer to an amelioration of at least one parameter that measures or quantifies the symptom.
在本文中,术语“预防”病状、疾病或者病症包括:预防、延迟或者减少受试者中发展的病状、疾病或者病症的至少一种临床或者亚临床症状出现的发生率和/或可能性,该受试者可能患有或易患该病状、疾病或者病症但尚未经历或者表现出该病状、疾病或者病症的临床或亚临床症状。As used herein, the term "preventing" a condition, disease or disorder includes preventing, delaying or reducing the incidence and/or likelihood of the occurrence of at least one clinical or subclinical symptom of a developing condition, disease or disorder in a subject, The subject may suffer from or be susceptible to the condition, disease or disorder but has not experienced or exhibited clinical or subclinical symptoms of the condition, disease or disorder.
在本文中,术语“局部施用”或“局部途径”是指具有局部作用的给药。As used herein, the term "topical administration" or "local route" refers to administration with a local effect.
在本文中,术语“转导”、“转染”和“转化”是指将外源核酸递送到宿主细胞中,然后多核苷酸产物的转录和翻译的过程,该过程包括使用重组病毒将外源多核苷酸引入宿主细胞。As used herein, the terms "transduction," "transfection," and "transformation" refer to the process of delivering exogenous nucleic acid into a host cell, followed by transcription and translation of the polynucleotide product, which involves the transfer of exogenous A source polynucleotide is introduced into a host cell.
在本文中,术语“基因送递”指的是将外源多核苷酸引入细胞来进行基因传递,包括靶向、结合、摄取、转运、复制子整合和表达。Herein, the term "gene delivery" refers to the introduction of exogenous polynucleotides into cells for gene delivery, including targeting, binding, uptake, transport, replicon integration and expression.
在本文中,术语“基因表达”或“表达”是指基因转录、翻译和翻译后修饰产生基因的RNA或蛋白产物的过程。As used herein, the term "gene expression" or "expression" refers to the process of gene transcription, translation and post-translational modification to produce the gene's RNA or protein product.
在本文中,术语“感染”是指包含多核苷酸组分的病毒或病毒颗粒将多核苷酸递送至细胞中并产生其RNA和蛋白质产物的过程,也可指病毒在宿主细胞中的复制过程。As used herein, the term "infection" refers to the process by which a virus or virus particle comprising a polynucleotide component delivers a polynucleotide into a cell and produces its RNA and protein products, and may also refer to the process of virus replication in a host cell .
在本文中,术语“载体”指封装多核苷酸的一个或一系列大分子,其促进多核苷酸在体外或体内递送至靶细胞。载体的种类包括但不限于质粒、病毒载体、脂质体和其他基因递送载体。待递送的多核苷酸有时被称为“表达盒”或“转基因表达盒”,其可以包含但不限于某些蛋白质或合成多肽(其可以增强、抑制、削弱、保护、触发或预防某些生物学和生理功能)的编码序列、疫苗开发中感兴趣的编码序列(例如表达适于在哺乳动物中引发免 疫应答的蛋白质、多肽或肽的多核苷酸)、RNAi材料的编码序列(例如,shRNA、siRNA、反义寡核苷酸)或可选的生物标记。As used herein, the term "vector" refers to one or a series of macromolecules that encapsulate a polynucleotide, which facilitates the delivery of the polynucleotide to target cells in vitro or in vivo. Types of vectors include, but are not limited to, plasmids, viral vectors, liposomes, and other gene delivery vehicles. The polynucleotides to be delivered are sometimes referred to as "expression cassettes" or "transgenic expression cassettes," which may include, but are not limited to, certain proteins or synthetic polypeptides (which can enhance, inhibit, weaken, protect, trigger, or prevent certain biological biological and physiological functions), coding sequences of interest in vaccine development (e.g. expressing immune response proteins, polynucleotides of polypeptides or peptides), coding sequences of RNAi materials (eg, shRNA, siRNA, antisense oligonucleotides), or alternative biomarkers.
在本文中,术语“表达盒”、“转基因盒”和“转基因表达盒”可互换地使用,指编码特定蛋白质、多肽或RNAi元件的多核苷酸片段,其可以克隆到质粒载体中。Herein, the terms "expression cassette", "transgene cassette" and "transgene expression cassette" are used interchangeably to refer to a polynucleotide fragment encoding a specific protein, polypeptide or RNAi element, which can be cloned into a plasmid vector.
在一些实施方式中,“盒”也可以包装到AAV颗粒中并用作病毒基因组以将转基因产物递送到靶细胞中。“盒”还可以包括其他调控元件,例如特异性启动子/增强子、polyA、内含子等,以增强或减弱转基因产物的表达。In some embodiments, a "cassette" can also be packaged into an AAV particle and used as the viral genome to deliver the transgene product into target cells. The "cassette" may also include other regulatory elements, such as specific promoters/enhancers, polyA, introns, etc., to enhance or attenuate the expression of the transgene product.
在一个实施方式中,除了编码蛋白质产物的序列外,转基因盒还包含许多调控元件以使转基因包装到病毒中,例如145bp的正常ITR、长度大约100bp的缩短ITR。在一些实施方式中,转基因盒还包含用于控制蛋白质产物表达的多核苷酸元件,例如复制起点、聚腺苷酸化信号、启动子和增强子(例如,具有脊椎动物β-肌动蛋白、β-球蛋白或β-球蛋白调节元件的CMV启动子或其他杂种CMV启动子(称为CB和CAG启动子)、SV40启动子)。启动子和增强子可以被化学药品或激素(例如强力霉素或他莫昔芬)激活,以确保在特定时间点的进行基因表达。此外,启动子和增强子可以是天然或人工或嵌合序列,即原核或真核序列。In one embodiment, the transgene cassette contains a number of regulatory elements to enable packaging of the transgene into the virus, such as a normal ITR of 145 bp, a shortened ITR of approximately 100 bp in length, in addition to the sequence encoding the protein product. In some embodiments, the transgenic cassette further comprises polynucleotide elements for controlling expression of the protein product, such as origins of replication, polyadenylation signals, promoters, and enhancers (e.g., with vertebrate β-actin, β - CMV promoters of globulin or β-globin regulatory elements or other hybrid CMV promoters (called CB and CAG promoters, SV40 promoter). Promoters and enhancers can be activated by chemicals or hormones (such as doxycycline or tamoxifen) to ensure gene expression at specific time points. Furthermore, promoters and enhancers may be natural or artificial or chimeric sequences, ie prokaryotic or eukaryotic sequences.
在一些优选实施方式中,用于基因表达的诱导型调控元件可以是组织或器官特异性启动子或增强子,其包括但不限于:对各种类型的关节组织细胞具有特异性的启动子,例如,关节软骨细胞谱系特异性启动子(例如,collagen启动子、aggrecan启动子)、滑膜蛋白基因启动子、脂肪组织特异性启动子(例如PPAR白基因启动子)、骨祖细胞特异性启动子(例如转录因子SOX9启动子),以及成骨细胞谱系的特异性启动子(例如骨钙蛋白启动子)。In some preferred embodiments, the inducible regulatory element for gene expression may be a tissue or organ-specific promoter or enhancer, including but not limited to: promoters specific to various types of joint tissue cells, For example, articular chondrocyte lineage-specific promoters (e.g., collagen promoter, aggrecan promoter), synoviolin gene promoters, adipose tissue-specific promoters (e.g., PPAR white gene promoter), osteoprogenitor cell-specific promoters promoters (such as the transcription factor SOX9 promoter), and specific promoters of the osteoblast lineage (such as the osteocalcin promoter).
在本文中,术语“反向末端重复(ITR)”包括形成发夹结构并用作顺式元件以介导病毒复制、包装和整合的任何AAV病毒末端重复或合成序列。本文的ITR包括但不限于来自1-11型AAV(禽类AAV、牛AAV、犬AAV、马AAV和绵羊AAV的末端重复序列)。此外,AAV末端重复序列不必具有天然末端重复序列,只要该末端重复序列可用于病毒复制、包装和整合即可。As used herein, the term "inverted terminal repeat (ITR)" includes any AAV viral terminal repeat or synthetic sequence that forms a hairpin structure and acts as a cis element to mediate viral replication, packaging and integration. ITRs herein include, but are not limited to, terminal repeats from AAV types 1-11 (avian AAV, bovine AAV, canine AAV, equine AAV, and ovine AAV). Furthermore, the AAV terminal repeats need not have native terminal repeats, so long as the terminal repeats are available for viral replication, packaging and integration.
在本文中,术语“顺式元件”是指包装在AAV颗粒中并在靶细胞中表达以产生具有治疗作用的蛋白质产物的转基因盒。As used herein, the term "cis-element" refers to a transgene cassette packaged in AAV particles and expressed in target cells to produce a therapeutic protein product.
在本文中,术语“密码子优化”是指从其天然形式修饰的多核苷酸序列。这样的修饰导致一个或多个碱基对的差异,其相应的氨基酸序列中有或没有改变,可能增强或抑制基 因的表达和/或对修饰的多核苷酸序列的细胞应答。As used herein, the term "codon-optimized" refers to a polynucleotide sequence modified from its native form. Such modifications result in differences of one or more base pairs, with or without changes in the corresponding amino acid sequences, which may enhance or inhibit the Expression of the gene and/or cellular response to the modified polynucleotide sequence.
本领域技术人员已知,AAV衣壳蛋白含有VP1、VP2和VP3蛋白,VP2和VP3蛋白在VP1蛋白内部的起始密码子处经历转录和翻译过程,即,VP1序列包含VP2和VP3序列。Those skilled in the art know that the AAV capsid protein contains VP1, VP2 and VP3 proteins, and the VP2 and VP3 proteins undergo transcription and translation at the start codon inside the VP1 protein, that is, the VP1 sequence contains the VP2 and VP3 sequences.
在一个实施方式中,AAV衣壳蛋白可以为任何AAV血清型衣壳蛋白,包括天然AAV衣壳蛋白(例如,天然的1-11型AAV、禽AAV、牛AAV、犬AAV、马AAV和绵羊AAV的衣壳蛋白)和其他人工改造的AAV衣壳蛋白(例如,人工改造的1-11型AAV、禽AAV、牛AAV、犬AAV、马AAV和绵羊AAV的衣壳蛋白)。不同AAV血清型的基因组序列、ITR序列、Rep和Cap蛋白在本领域内是已知的。这些序列可以在文献或在公共数据库查找,例如GenBank数据库。In one embodiment, the AAV capsid protein can be any AAV serotype capsid protein, including native AAV capsid proteins (e.g., native AAV types 1-11, avian AAV, bovine AAV, canine AAV, equine AAV, and ovine AAV). AAV capsid protein) and other engineered AAV capsid proteins (eg, engineered capsid proteins of types 1-11, avian AAV, bovine AAV, canine AAV, equine AAV, and ovine AAV). The genome sequences, ITR sequences, Rep and Cap proteins of different AAV serotypes are known in the art. These sequences can be found in the literature or in public databases, such as the GenBank database.
在一个实施方式中,本公开提供了具有拮抗IL1信号通路作用的治疗工具,可以用于治疗具有相关病理机制的多种疾病,包括但不限于:恶性肿瘤和炎症疾病(包括急性炎症疾病和慢性炎症疾病,如关节炎症疾病,例如骨性关节炎、类风湿关节炎、滑膜炎、血友病关节炎或其他炎症引起的关节炎症疾病)。In one embodiment, the present disclosure provides a therapeutic tool that can antagonize the IL1 signaling pathway, which can be used to treat various diseases with related pathological mechanisms, including but not limited to: malignant tumors and inflammatory diseases (including acute inflammatory diseases and chronic Inflammatory diseases, such as joint inflammatory diseases, such as osteoarthritis, rheumatoid arthritis, synovitis, hemophilic arthritis or other inflammation-induced joint inflammatory diseases).
在一个实施方式中,治疗工具(例如转基因表达盒)的蛋白产物包括具有拮抗IL1信号通路作用的蛋白质,例如但不限于,IL-1Ra、重组IL-1R可溶性受体、抗IL-1抗体。In one embodiment, the protein product of the therapeutic tool (such as a transgene expression cassette) includes a protein that antagonizes the IL1 signaling pathway, such as but not limited to, IL-1Ra, recombinant IL-1R soluble receptor, anti-IL-1 antibody.
本发明人发现,具有AAV843衣壳(SEQ ID NO:24)的AAV载体表现出高效的关节腔转导效率。因此,在一些优选实施方式中,AAV843载体用于递送表达IL-1Ra的基因。The inventors found that AAV vectors with the AAV843 capsid (SEQ ID NO: 24) exhibit high transduction efficiency in the joint cavity. Accordingly, in some preferred embodiments, an AAV843 vector is used to deliver a gene expressing IL-IRa.
在一个实施方式中,以CB为启动子,启动子后内含子为VH4,构建未经密码子优化的原始人源白介素1受体拮抗蛋白编码核酸序列的转基因表达盒B93,其核苷酸序列如SEQ ID NO:9所示。In one embodiment, with CB as the promoter, the intron behind the promoter is VH4, and the transgenic expression cassette B93 of the nucleic acid sequence encoding the original human interleukin-1 receptor antagonist protein without codon optimization is constructed, and its nucleotide The sequence is shown in SEQ ID NO:9.
在一个实施方式中,以CB为启动子,启动子后内含子为VH4,构建经密码子优化的人源白介素1受体拮抗蛋白编码核酸序列(优化序列一(IL1Ra(1)),SEQ ID NO:7)的转基因表达盒B94,其核苷酸序列如SEQ ID NO:10所示。In one embodiment, with CB as the promoter, the intron behind the promoter is VH4, and the codon-optimized human interleukin 1 receptor antagonistic protein coding nucleic acid sequence (optimized sequence one (IL1Ra(1)), SEQ ID NO: 7) the transgenic expression cassette B94, its nucleotide sequence is as shown in SEQ ID NO: 10.
在一个实施方式中,以CB为启动子,启动子后内含子为VH4,在优化序列一(SEQ ID NO:7)中插入Chi内含子,构建转基因表达盒B95,其核苷酸序列如SEQ ID NO:11所示。In one embodiment, with CB as the promoter, the intron behind the promoter is VH4, and the Chi intron is inserted into the optimized sequence one (SEQ ID NO: 7) to construct the transgenic expression cassette B95, its nucleotide sequence As shown in SEQ ID NO: 11.
在一个实施方式中,以CB为启动子,启动子后内含子为VH4,在优化序列一(SEQ ID NO:7)中依次插入Chi和SV40两个内含子,构建转基因表达盒B96,其核苷酸序列如SEQ ID NO:12所示。 In one embodiment, CB is used as the promoter, the intron behind the promoter is VH4, two introns Chi and SV40 are sequentially inserted into the optimized sequence one (SEQ ID NO: 7), and the transgene expression cassette B96 is constructed, Its nucleotide sequence is shown in SEQ ID NO:12.
在一个实施方式中,以CB为启动子,启动子后内含子为VH4,在优化序列一(SEQ ID NO:7)中插入SV40内含子,构建转基因表达盒B97,其核苷酸序列如SEQ ID NO:13所示。In one embodiment, with CB as the promoter, the intron behind the promoter is VH4, and the SV40 intron is inserted into the optimized sequence one (SEQ ID NO: 7) to construct the transgenic expression cassette B97, its nucleotide sequence As shown in SEQ ID NO:13.
在一个实施方式中,以CB为启动子,启动子后内含子为VH4,在优化序列一(SEQ ID NO:7)中依次插入SV40和Chi两个内含子,构建转基因表达盒B98,其核苷酸序列如SEQ ID NO:14所示。In one embodiment, CB is used as the promoter, and the intron behind the promoter is VH4, and the two introns SV40 and Chi are sequentially inserted into the optimized sequence one (SEQ ID NO: 7) to construct the transgenic expression cassette B98, Its nucleotide sequence is shown in SEQ ID NO: 14.
在一个实施方式中,以CB为启动子,启动子后内含子为SV40,构建未经密码子优化的原始人源白介素1受体拮抗蛋白编码核酸序列的转基因表达盒B126,其核苷酸序列如SEQ ID NO:15所示。In one embodiment, with CB as the promoter, the intron behind the promoter is SV40, and the transgenic expression cassette B126 of the original human interleukin-1 receptor antagonist protein coding nucleic acid sequence without codon optimization is constructed, and its nucleotide The sequence is shown in SEQ ID NO:15.
在一个实施方式中,以CB为启动子,启动子后内含子为SV40,构建经密码子优化的人源白介素1受体拮抗蛋白编码核酸序列(优化序列二(IL1Ra(2)),SEQ ID NO:8)的转基因表达盒B127,其核苷酸序列如SEQ ID NO:16所示。In one embodiment, with CB as the promoter, the intron behind the promoter is SV40, and the codon-optimized human interleukin 1 receptor antagonistic protein coding nucleic acid sequence (optimized sequence two (IL1Ra(2)), SEQ ID NO:8) the transgenic expression cassette B127, its nucleotide sequence is as shown in SEQ ID NO:16.
在一个实施方式中,以CB为启动子,启动子后内含子为SV40,在优化序列二(SEQ ID NO:8)中插入Chi内含子,构建转基因表达盒B128,其核苷酸序列如SEQ ID NO:17所示。In one embodiment, with CB as the promoter, the intron after the promoter is SV40, and the Chi intron is inserted in the optimized sequence two (SEQ ID NO: 8) to construct the transgenic expression cassette B128, its nucleotide sequence As shown in SEQ ID NO:17.
在一个实施方式中,以CB为启动子,启动子后内含子为SV40,在优化序列二(SEQ ID NO:8)中插入Chi内含子并在优化序列二的末端连接VH4内含子,构建转基因表达盒B129,其核苷酸序列如SEQ ID NO:18所示。In one embodiment, with CB as the promoter, the intron after the promoter is SV40, the Chi intron is inserted in the optimized sequence two (SEQ ID NO: 8) and the VH4 intron is connected at the end of the optimized sequence two , to construct a transgenic expression cassette B129, the nucleotide sequence of which is shown in SEQ ID NO: 18.
在一个实施方式中,以CB为启动子,启动子后内含子为SV40,在优化序列二(SEQ ID NO:8)中依次插入Chi和VH4两个内含子,构建转基因表达盒B130,其核苷酸序列如SEQ ID NO:19所示。In one embodiment, with CB as the promoter, the intron behind the promoter is SV40, two introns Chi and VH4 are sequentially inserted into the optimized sequence 2 (SEQ ID NO: 8) to construct the transgenic expression cassette B130, Its nucleotide sequence is shown in SEQ ID NO: 19.
在一个实施方式中,以CB为启动子,启动子后内含子为SV40,在优化序列二(SEQ ID NO:8)中插入VH4内含子,构建转基因表达盒B131,其核苷酸序列如SEQ ID NO:20所示。In one embodiment, with CB as the promoter, the intron behind the promoter is SV40, and the VH4 intron is inserted into the optimized sequence two (SEQ ID NO: 8) to construct the transgenic expression cassette B131, its nucleotide sequence As shown in SEQ ID NO:20.
在一个实施方式中,以CB为启动子,启动子后内含子为SV40,在优化序列二(SEQ ID NO:8)中插入VH4内含子并在优化序列二的末端连接Chi内含子,构建转基因表达盒B132,其核苷酸序列如SEQ ID NO:21所示。In one embodiment, with CB as the promoter, the intron after the promoter is SV40, the VH4 intron is inserted in the optimized sequence two (SEQ ID NO: 8) and the Chi intron is connected at the end of the optimized sequence two , to construct a transgenic expression cassette B132, the nucleotide sequence of which is shown in SEQ ID NO: 21.
在一个实施方式中,以CB为启动子,启动子后内含子为SV40,在优化序列二(SEQ ID NO:8)中依次插入VH4和Chi两个内含子,构建转基因表达盒B133,其核苷酸序列如SEQ ID NO:22所示。 In one embodiment, CB is used as the promoter, the intron behind the promoter is SV40, and the two introns VH4 and Chi are sequentially inserted into the optimized sequence 2 (SEQ ID NO: 8) to construct the transgenic expression cassette B133, Its nucleotide sequence is shown in SEQ ID NO:22.
在一个优选实施方式中,表达白介素1受体拮抗蛋白的转基因表达盒包括:CB启动子序列(SEQ ID NO:1)、SV40内含子(SEQ ID NO:3)、bGH聚腺苷酸化(polyA)序列(SEQ ID NO:2)和密码子优化的人源IL-1Ra编码序列(SEQ ID NO:8),该密码子优化的人源IL-1Ra编码序列内插入有Chi内含子(SEQ ID NO:5)和VH4内含子(SEQ ID NO:4)以增强蛋白质的表达,如此形成B130表达盒(SEQ ID NO:19)。B130表达盒的两侧是一个正常的ITR和一个缩短的ITR,以实现将B130表达盒作为自互补AAV载体包装到AAV颗粒中。In a preferred embodiment, the transgenic expression cassette expressing interleukin 1 receptor antagonist protein comprises: CB promoter sequence (SEQ ID NO: 1), SV40 intron (SEQ ID NO: 3), bGH polyadenylation ( polyA) sequence (SEQ ID NO: 2) and codon-optimized human IL-1Ra coding sequence (SEQ ID NO: 8), the codon-optimized human IL-1Ra coding sequence is inserted with a Chi intron ( SEQ ID NO: 5) and VH4 intron (SEQ ID NO: 4) to enhance the expression of the protein, thus forming the B130 expression cassette (SEQ ID NO: 19). The B130 expression cassette is flanked by a normal ITR and a shortened ITR to enable packaging of the B130 expression cassette into AAV particles as a self-complementary AAV vector.
在一些实施方式中,通过HEK293细胞的三质粒(质粒1:顺式元件质粒;质粒2:AAV Rep/Cap质粒;质粒3:辅助质粒)转染来生产IL-1Ra的AAV颗粒。In some embodiments, AAV particles of IL-IRa are produced by three-plasmid (plasmid 1: cis-element plasmid; plasmid 2: AAV Rep/Cap plasmid; plasmid 3: helper plasmid) transfection of HEK293 cells.
在一个实施方式中,为了产生具有治疗功能的AAV颗粒,按如下进行HEK293细胞的三质粒转染:质粒1:具有ITR的顺式元件质粒(例如,B130表达盒);质粒2:具有衣壳蛋白(例如,AAV843衣壳蛋白)编码序列的AAV Rep/Cap质粒;质粒3:具有腺病毒成分的辅助质粒,其能够促进AAV病毒体的复制、组装和包装。在一个实施方式中,将HEK293细胞产生的AAV颗粒通过亲和层析和碘克沙醇密度梯度超速离心进行纯化(Xiao X等,J Virol(1998)72(3):2224-32)。In one embodiment, to generate therapeutically functional AAV particles, three-plasmid transfection of HEK293 cells is performed as follows: Plasmid 1: cis-element plasmid with ITR (e.g., B130 expression cassette); Plasmid 2: with capsid AAV Rep/Cap plasmid of protein (for example, AAV843 capsid protein) coding sequence; Plasmid 3: a helper plasmid with adenoviral components, which can facilitate the replication, assembly and packaging of AAV virions. In one embodiment, AAV particles produced by HEK293 cells are purified by affinity chromatography and iodixanol density gradient ultracentrifugation (Xiao X et al., J Virol (1998) 72(3):2224-32).
本领域技术人员可以使用已知的标准方法来生产重组和合成的多肽或其蛋白质、设计核酸序列、生产转化细胞、构建重组AAV突变体、改造衣壳蛋白质、包装表达AAV Rep和/或Cap序列的载体,以及瞬时或稳定转染包装细胞。这些技术是本领域技术人员已知的。参见例如,分子克隆(MOLECULAR CLONING):实验室手册(A LABORATORY MANUAL),第二版,(冷泉港,纽约州,1989年)。Those skilled in the art can use known standard methods to produce recombinant and synthetic polypeptides or proteins thereof, design nucleic acid sequences, produce transformed cells, construct recombinant AAV mutants, transform capsid proteins, package and express AAV Rep and/or Cap sequences vector, and transiently or stably transfect packaging cells. These techniques are known to those skilled in the art. See, eg, MOLECULAR CLONING: A LABORATORY MANUAL, Second Edition, (Cold Spring Harbor, NY, 1989).
在一些实施方式中,本公开的基因递送系统用于辅助细胞移植治疗。具体地,具有转基因的AAV颗粒可用于体外转导各种类型的细胞以产生表达蛋白质产物的稳定细胞系,然后可将其引入体内以用于治疗目的。细胞的类型包括但不限于软骨细胞、滑膜细胞、间充质干细胞。In some embodiments, the gene delivery systems of the present disclosure are used to aid in cell transplantation therapy. Specifically, AAV particles with transgenes can be used to transduce various types of cells in vitro to generate stable cell lines expressing protein products, which can then be introduced in vivo for therapeutic purposes. Types of cells include, but are not limited to, chondrocytes, synoviocytes, mesenchymal stem cells.
在一个实施方式中,用于移植的细胞是受试者的自体细胞,其允许体外培养。将细胞引入或移植到受试者中的原理和技术是本领域技术人员已知的。In one embodiment, the cells used for transplantation are autologous cells of the subject, which allow for in vitro culture. The principles and techniques of introducing or transplanting cells into a subject are known to those skilled in the art.
在一个实施方式中,从HEK293细胞的培养基和裂解物中收获AAV颗粒。纯化方法例如亲和色谱、离子交换色谱、氯化铯和碘克沙醇梯度超速离心。与AAV生产和纯化有关的化学物质或试剂包括但不限于:用于细胞培养的化学物质或试剂(例如,细胞培养基的成分,包括牛、马、山羊、鸡或其他脊椎动物血清、谷氨酰胺、葡萄糖、蔗糖、丙酮酸 纳、酚红;抗生素,例如青霉素、卡那霉素、链霉素、四环素);用于细胞裂解、多核苷酸沉淀或超速离心的化学物质或试剂(例如Triton X-100、NP-40、脱氧胆酸钠、十二烷基硫酸钠、溴化多米芬、钠十二烷基水杨酸酯、氯化钠、氯化镁、氯化钙、氯化钡、硝酸盐、氯化钾、氯化铵、过硫酸铵、硫酸铵、PEG-20、PEG-40、PEG-400、PEG-2000、PEG-6000、PEG-8000、PEG-20000、Tris-HCl、Tris-乙酸盐、氯化锰、磷酸盐、碳酸氢盐、氯化铯、甲醇、乙醇、甘油、碘克沙醇、异丙醇、丁醇、安息香酶、DNase I、RNase);亲和柱材料(例如AAVX亲和树脂、硫酸肝素蛋白聚糖和粘蛋白树脂、与AAV特异性抗体相关的其他材料);离子交换色谱材料和洗涤缓冲液中包含的酸、碱和有机物(例如盐酸、硫酸、乙酸、甲酸、硝酸、尿素、丙酮、氯仿、乙腈、三氟乙酸、氢氧化钠、氢氧化钾、氢氧化钡、氢氧化铵、Tris碱或其他有机胺、泊洛沙姆188、吐温20、吐温40、吐温80、盐酸胍)。In one embodiment, AAV particles are harvested from the culture medium and lysates of HEK293 cells. Purification methods such as affinity chromatography, ion exchange chromatography, cesium chloride and iodixanol gradient ultracentrifugation. Chemicals or reagents related to AAV production and purification include, but are not limited to: Chemicals or reagents used in cell culture (e.g., components of cell culture media including bovine, equine, goat, chicken or other vertebrate serum, glutamine Amide, Glucose, Sucrose, Pyruvate sodium, phenol red; antibiotics such as penicillin, kanamycin, streptomycin, tetracycline); chemicals or reagents for cell lysis, polynucleotide precipitation or ultracentrifugation (such as Triton X-100, NP-40, Sodium deoxycholate, Sodium Lauryl Sulfate, Domiphene Bromide, Sodium Lauryl Salicylate, Sodium Chloride, Magnesium Chloride, Calcium Chloride, Barium Chloride, Nitrate, Potassium Chloride, Chloride Ammonium, Ammonium Persulfate, Ammonium Sulfate, PEG-20, PEG-40, PEG-400, PEG-2000, PEG-6000, PEG-8000, PEG-20000, Tris-HCl, Tris-Acetate, Manganese Chloride , phosphate, bicarbonate, cesium chloride, methanol, ethanol, glycerol, iodixanol, isopropanol, butanol, benzoin enzyme, DNase I, RNase); affinity column materials (such as AAVX affinity resin, Heparan sulfate proteoglycans and mucin resins, other materials associated with AAV-specific antibodies); acids, bases, and organics contained in ion-exchange chromatography materials and wash buffers (e.g., hydrochloric, sulfuric, acetic, formic, nitric, urea , acetone, chloroform, acetonitrile, trifluoroacetic acid, sodium hydroxide, potassium hydroxide, barium hydroxide, ammonium hydroxide, Tris base or other organic amines, Poloxamer 188, Tween 20, Tween 40, Tween 80, guanidine hydrochloride).
在一个实施方式中,本公开的AAV载体可以装载外源多核苷酸用于将基因递送到靶细胞中。因此,本公开的AAV载体可用于在体外或体内将核酸递送至细胞。In one embodiment, the AAV vectors of the present disclosure can be loaded with exogenous polynucleotides for gene delivery into target cells. Thus, the AAV vectors of the present disclosure can be used to deliver nucleic acids to cells in vitro or in vivo.
在一个实施方式中,由AAV载体递送到靶细胞的外源多核苷酸编码用于治疗用途的天然蛋白质,所述天然蛋白质经密码子优化或未经密码子优化。In one embodiment, the exogenous polynucleotide delivered to the target cell by the AAV vector encodes a native protein for therapeutic use, either codon-optimized or non-codon-optimized.
在一个实施方式中,由AAV载体递送到靶细胞的外源多核苷酸编码合成多肽。In one embodiment, the exogenous polynucleotide delivered by the AAV vector to the target cell encodes a synthetic polypeptide.
在一个实施方式中,本公开的AAV载体或转基因表达盒或基因递送系统被制成药物制剂(例如,注射剂)施用于人或其他哺乳动物。此外,药物制剂可以通过全身或局部(例如,静脉内、关节腔内)的给药方式以单剂量或多剂量递送。In one embodiment, the AAV vector or transgene expression cassette or gene delivery system of the present disclosure is made into a pharmaceutical preparation (eg, injection) and administered to humans or other mammals. In addition, pharmaceutical formulations may be delivered in single or multiple doses by systemic or local (eg, intravenous, intra-articular) administration.
在一个实施方式中,本公开的药物用于体外转导细胞或体内转导哺乳动物(例如啮齿动物、灵长类动物和人类),从而治疗可通过阻断IL-1信号通路而改善的疾病,如急性炎症疾病、慢性炎症疾病和恶性肿瘤,优选关节炎症。In one embodiment, the medicament of the present disclosure is used to transduce cells in vitro or mammals (such as rodents, primates and humans) in vivo to treat diseases that can be improved by blocking the IL-1 signaling pathway , such as acute inflammatory diseases, chronic inflammatory diseases and malignant tumors, preferably joint inflammation.
在一个实施方式中,关节炎症选自:骨性关节炎、类风湿关节炎、滑膜炎、血友病关节炎和其他炎症引起的关节炎症。在一个实施方式中,关节炎症涉及关节功能的退化。In one embodiment, the joint inflammation is selected from the group consisting of osteoarthritis, rheumatoid arthritis, synovitis, hemophilic arthritis and other inflammatory joint inflammations. In one embodiment, joint inflammation involves degeneration of joint function.
在一个实施方式中,治疗或改善关节炎症疾病是指改善接受治疗的患者的关节疼痛、软骨磨损以及关节功能。In one embodiment, treating or improving joint inflammatory disease refers to improving joint pain, cartilage wear and joint function in the treated patient.
下面结合附图和实施例对本公开作进一步详细的说明。以下实施例仅用于说明本公开而不用于限制本公开的范围。实施例中未注明具体条件的实验方法,系按照本领域已知的常规条件,或按照制造厂商所建议的条件进行操作。The present disclosure will be further described in detail below in conjunction with the accompanying drawings and embodiments. The following examples are only for illustrating the present disclosure and are not intended to limit the scope of the present disclosure. The experimental methods without specific conditions indicated in the examples were operated according to conventional conditions known in the art, or according to the conditions suggested by the manufacturer.
实施例Example
实施例1:IL1Ra基因的密码子优化以及质粒构建Example 1: Codon optimization and plasmid construction of IL1Ra gene
首先,基于NCBI基因库中的人源IL1Ra的cDNA基因序列,对IL1Ra的原始序列(SEQ ID NO:6)进行密码子优化,得到两个密码子优化的序列:IL1Ra优化序列一(IL1Ra(1))(SEQ ID NO:7)和IL1Ra优化序列二(IL1Ra(2))(SEQ ID NO:8)。First, based on the cDNA gene sequence of human IL1Ra in the NCBI gene bank, the original sequence of IL1Ra (SEQ ID NO: 6) was codon-optimized to obtain two codon-optimized sequences: IL1Ra optimized sequence one (IL1Ra(1 )) (SEQ ID NO: 7) and IL1Ra optimized sequence two (IL1Ra(2)) (SEQ ID NO: 8).
接着,分别构建基于IL1Ra原始序列、IL1Ra优化序列一和IL1Ra优化序列二的表达盒:Next, construct expression cassettes based on IL1Ra original sequence, IL1Ra optimized sequence 1 and IL1Ra optimized sequence 2:
以CB为启动子,VH4作为内含子,以IL1Ra原始序列构建质粒B93(SEQ ID NO:9);以CB为启动子,VH4作为内含子,以IL1Ra优化序列一构建质粒B94(SEQ ID NO:10);以CB为启动子,VH4作为内含子,以IL1Ra优化序列一为基础在转录单元上的5’端和3’端插入Chi和/或SV40内含子构建质粒B95至B98(SEQ ID NO:11至SEQ ID NO:14);With CB as promoter and VH4 as intron, plasmid B93 (SEQ ID NO: 9) was constructed with IL1Ra original sequence; with CB as promoter and VH4 as intron, plasmid B94 (SEQ ID NO: 9) was constructed with IL1Ra optimized sequence one NO: 10); with CB as the promoter, VH4 as the intron, and based on IL1Ra optimized sequence 1, Chi and/or SV40 introns were inserted at the 5' end and 3' end of the transcription unit to construct plasmids B95 to B98 (SEQ ID NO: 11 to SEQ ID NO: 14);
以CB为启动子,SV40作为内含子,以IL1Ra原始序列构建质粒B126(SEQ ID NO:15);以CB为启动子,SV40作为内含子,以IL1Ra优化序列二构建质粒B127(SEQ ID NO:16);以CB为启动子,SV40作为内含子,以IL1Ra优化序列二为基础在转录单元上的5’端和3’端插入Chi和/或VH4内含子构建质粒B128至B133(SEQ ID NO:17至SEQ ID NO:22)。With CB as promoter and SV40 as intron, plasmid B126 (SEQ ID NO: 15) was constructed with the original sequence of IL1Ra; with CB as promoter and SV40 as intron, plasmid B127 (SEQ ID NO: 15) was constructed with the optimized sequence of IL1Ra NO: 16); with CB as the promoter and SV40 as the intron, based on IL1Ra optimized sequence 2, insert Chi and/or VH4 intron at the 5' end and 3' end of the transcription unit to construct plasmids B128 to B133 (SEQ ID NO: 17 to SEQ ID NO: 22).
实施例2:密码子优化的人源IL1Ra编码核酸序列的表达Example 2: Expression of codon-optimized human IL1Ra-encoding nucleic acid sequence
将Huh7细胞铺于12孔板中,接种密度为2E+5个细胞/孔,待细胞涨至80-90%时,更换无血清DMEM。配制转染体系,转染质粒量为2.5μg(质粒:PEI=1:2),加入每孔转染12h后,更换为10%胎牛血清的DMEM继续培养48h。用具有IL1Ra优化序列一的5个质粒(B94-B98)转染Huh7细胞,72h后收集上清液,测定IL1Ra蛋白的浓度。Spread Huh7 cells in a 12-well plate at a seeding density of 2E+5 cells/well, and replace serum-free DMEM when the cells increase to 80-90%. A transfection system was prepared, the amount of transfection plasmid was 2.5 μg (plasmid: PEI=1:2), added to each well for 12 hours after transfection, and then replaced with DMEM with 10% fetal bovine serum to continue culturing for 48 hours. Huh7 cells were transfected with five plasmids (B94-B98) with IL1Ra optimized sequence one, and the supernatant was collected 72 hours later to measure the concentration of IL1Ra protein.
ELISA结果显示,通过插入Chi和/或SV40内含子进一步优化得到的4个质粒(B95-B98)表达均比B94质粒高(图2A),这表明通过插入Chi或SV40内含子可以提高基因的表达。ELISA results showed that the expression of the four plasmids (B95-B98) obtained by further optimization by inserting Chi and/or SV40 introns was higher than that of the B94 plasmid (Fig. 2A), which indicated that gene expression could be improved by inserting Chi or SV40 introns. expression.
将具有IL1Ra优化序列一的质粒包装成AAV843病毒感染Huh7细胞,感染MOI为7.5E+5vg/细胞,72h后收集上清液,测定IL1Ra蛋白浓度。The plasmid with IL1Ra optimized sequence 1 was packaged into AAV843 virus to infect Huh7 cells at an infection MOI of 7.5E+5vg/cell, and the supernatant was collected after 72 hours to measure the IL1Ra protein concentration.
ELISA结果显示(图2B),病毒感染的结果与质粒转染的结果基本一致,其中B96病毒表达升高最显著。ELISA results showed ( FIG. 2B ) that the results of virus infection were basically consistent with those of plasmid transfection, and the expression of B96 virus was most significantly increased.
将包装IL1Ra原始序列的B93病毒以及包装IL1Ra优化序列一的B94至B98病毒尾静脉注射进C57小鼠体内,剂量为1E+13vg/kg。注射3周后提取血清,测定IL1Ra的表达。The B93 virus packaging the original sequence of IL1Ra and the B94 to B98 virus packaging IL1Ra optimized sequence 1 were injected into C57 mice through the tail vein at a dose of 1E+13vg/kg. Serum was extracted 3 weeks after injection, and the expression of IL1Ra was determined.
结果表明,经密码子优化的IL1Ra(1)具有增加的IL1Ra蛋白表达,并且,通过插入Chi和/或SV40内含子进一步优化的基因在动物体内的蛋白表达也进一步得到了改善(图 2C)。The results showed that codon-optimized IL1Ra(1) had increased IL1Ra protein expression, and the protein expression of genes further optimized by inserting Chi and/or SV40 introns was further improved in animals (Fig. 2C).
将具有IL1Ra优化序列二的7个质粒(B127-B133)以及未优化的对照质粒(B126)转染Huh7细胞,48h后收集上清液,测定IL1Ra蛋白的浓度。Seven plasmids (B127-B133) with IL1Ra optimized sequence 2 and an unoptimized control plasmid (B126) were transfected into Huh7 cells, and the supernatant was collected after 48 hours to measure the concentration of IL1Ra protein.
ELISA结果显示,经密码子优化的B127的IL1Ra蛋白表达(10ng/ml)显著高于未优化的对照组质粒(1.5ng/ml),表明经密码子优化的IL1Ra(2)增加了其蛋白表达。并且,以IL1Ra(2)为基础,通过插入Chi和/或VH4内含子进一步优化得到的6个质粒(B128-B133)的表达均得到进一步提高,其中B130质粒表达的升高最显著(19.6ng/ml),相对于未优化的原始基因(B126)提高了13.9倍,相对于未插入内含子的B127质粒大约提高了1.9倍(图2D)。ELISA results showed that the IL1Ra protein expression of codon-optimized B127 (10ng/ml) was significantly higher than that of the unoptimized control plasmid (1.5ng/ml), indicating that codon-optimized IL1Ra(2) increased its protein expression . Moreover, based on IL1Ra(2), the expressions of the 6 plasmids (B128-B133) obtained by further optimizing by inserting Chi and/or VH4 introns were further improved, and the expression of the B130 plasmid increased most significantly (19.6 ng/ml), which was 13.9 times higher than that of the unoptimized original gene (B126), and about 1.9 times higher than that of the B127 plasmid without an intron inserted (Fig. 2D).
将具有IL1Ra优化序列二的质粒包装成AAV843病毒感染Huh7细胞,感染MOI为7.5E+5vg/细胞,48h后收集上清液,测定IL1Ra蛋白浓度。The plasmid with IL1Ra optimized sequence 2 was packaged into AAV843 virus to infect Huh7 cells at an infection MOI of 7.5E+5vg/cell, and the supernatant was collected after 48 hours to measure the IL1Ra protein concentration.
ELISA结果显示(图2E),病毒感染的结果与质粒转染的结果基本一致,表明插入Chi和/或VH4内含子可进一步提高基因的表达。The results of ELISA ( FIG. 2E ) showed that the results of virus infection were basically consistent with those of plasmid transfection, indicating that insertion of Chi and/or VH4 introns could further increase gene expression.
将包装IL1Ra原始序列的B126病毒以及包装IL1Ra优化序列二的B127至B133病毒尾静脉注射进C57小鼠体内,注射3周和4周后提取血清,测定IL1Ra的表达。The B126 virus packaging the original sequence of IL1Ra and the B127 to B133 virus packaging the optimized sequence II of IL1Ra were injected into the tail vein of C57 mice, and the serum was extracted 3 and 4 weeks after the injection, and the expression of IL1Ra was determined.
结果表明,经密码子优化的IL1Ra(2)具有增加的IL1Ra蛋白表达,并且,通过插入Chi和/或VH4内含子进一步优化的基因在动物体内的蛋白表达也进一步得到了改善(图2F,图2G)。The results showed that codon-optimized IL1Ra(2) had increased IL1Ra protein expression, and the protein expression of genes further optimized by insertion of Chi and/or VH4 introns was further improved in animals (Fig. 2F, Figure 2G).
最后,为对比IL1Ra优化序列一和IL1Ra优化序列二的IL1Ra蛋白表达效率,选择B94(优化序列一)、B96(优化序列一+内含子插入)、B127(优化序列二)和B130(优化序列二+内含子插入)病毒进行比较。转染Huh7细胞72h后,收集上清液,测定IL1Ra蛋白的浓度。Finally, in order to compare the IL1Ra protein expression efficiency of IL1Ra optimized sequence 1 and IL1Ra optimized sequence 2, B94 (optimized sequence 1), B96 (optimized sequence 1 + intron insertion), B127 (optimized sequence 2) and B130 (optimized sequence Two + intron insertion) viruses for comparison. After transfecting Huh7 cells for 72 hours, the supernatant was collected and the concentration of IL1Ra protein was determined.
ELISA结果显示,B127病毒的IL1Ra蛋白表达显著高于B94病毒(图2H,**p<0.01),且B130病毒的IL1Ra蛋白表达也优于B96病毒,表明IL1Ra优化序列二比IL1Ra优化序列一具有更高的IL1Ra蛋白表达。ELISA results showed that the expression of IL1Ra protein of B127 virus was significantly higher than that of B94 virus (Fig. 2H, **p<0.01), and the expression of IL1Ra protein of B130 virus was also better than that of B96 virus, indicating that IL1Ra optimized sequence 2 has higher expression than IL1Ra optimized sequence 1 Higher IL1Ra protein expression.
实施例3:密码子优化的IL1Ra基因的体外生物学功能Example 3: In vitro biological function of the codon-optimized IL1Ra gene
C28/I2软骨细胞在IL1的刺激下会发生炎症反应,促进IL1、IL6、TNFa等炎症因子的产生,进而引起软骨基质降解酶MMP13的升高,导致软骨基质的降解。在本实施例中,为了验证经密码子优化的IL1Ra基因转录翻译表达的蛋白的生物学活性,选择使用C28/I2软骨细胞进行验证。 Under the stimulation of IL1, C28/I2 chondrocytes will undergo an inflammatory reaction, which will promote the production of inflammatory factors such as IL1, IL6, and TNFa, which in turn will cause the increase of cartilage matrix degrading enzyme MMP13, leading to the degradation of cartilage matrix. In this embodiment, in order to verify the biological activity of the protein expressed by the transcription and translation of the codon-optimized IL1Ra gene, C28/I2 chondrocytes were selected for verification.
将C28/I2细胞铺于12孔板中,接种密度为2e5个细胞/孔。待汇合度达到80-90%时,更换无血清培养基,病毒感染MOI为7.5E+5vg/细胞。感染24h后,更换含10%胎牛血清的DMEM培养基。除空白对照孔外,每孔加入一定量的IL1(10ng/ml)刺激诱导,48h后收集细胞提取mRNA,测定IL1、IL6、TNFa以及MMP13的表达水平。C28/I2 cells were plated in 12-well plates at a seeding density of 2e5 cells/well. When the confluence reaches 80-90%, replace the serum-free medium, and the virus infection MOI is 7.5E+5vg/cell. After 24 hours of infection, the DMEM medium containing 10% fetal bovine serum was replaced. In addition to the blank control wells, a certain amount of IL1 (10ng/ml) was added to each well for stimulation and induction. After 48h, the cells were collected to extract mRNA, and the expression levels of IL1, IL6, TNFa and MMP13 were measured.
针对优化序列一的病毒体外功能实验结果显示,在IL1的作用下,模型组中IL1、IL6、TNFa以及MMP13水平(分别是6.4、23.8、2.1、9.4)显著高于空白对照组(1、1、1、1)(图3A)。IL1Ra病毒的预先感染弱化了IL1的刺激作用,IL1、IL6和MMP13的水平显著降低。同病毒滴度条件下,B96组的治疗效果最好,IL1、IL6、TNFa以及MMP13水平分别降低至1.9、3.5、1.9、2.3,这与其表达量最高的结果一致(图2B)。The results of the virus in vitro functional experiment for optimized sequence 1 showed that under the action of IL1, the levels of IL1, IL6, TNFa and MMP13 in the model group (6.4, 23.8, 2.1, 9.4, respectively) were significantly higher than those in the blank control group (1, 1 , 1, 1) (FIG. 3A). Pre-infection with IL1Ra virus attenuated the stimulating effect of IL1, and the levels of IL1, IL6 and MMP13 were significantly reduced. Under the same virus titer conditions, the B96 group had the best therapeutic effect, and the levels of IL1, IL6, TNFa and MMP13 were reduced to 1.9, 3.5, 1.9, and 2.3, respectively, which was consistent with the result of the highest expression (Figure 2B).
针对优化序列二的病毒体外功能实验结果显示,B127组的IL1、IL6、TNFa以及MMP13水平分别降低至2.5、8.5、1.3、4.6,该结果优于B126病毒组(分别为5.0、19.1、1.7、10.5)。同病毒滴度条件下,B130组的治疗效果较好,IL1、IL6、TNFa以及MMP13水平分别降低至2.1、4.6、1.0、3.3(图3B)。The results of the virus in vitro functional experiment for optimized sequence 2 showed that the levels of IL1, IL6, TNFa, and MMP13 in the B127 group were reduced to 2.5, 8.5, 1.3, and 4.6, respectively, which was better than that of the B126 virus group (5.0, 19.1, 1.7, 10.5). Under the same virus titer condition, the treatment effect of the B130 group was better, and the levels of IL1, IL6, TNFa and MMP13 were reduced to 2.1, 4.6, 1.0, and 3.3, respectively (Fig. 3B).
体外功能实验结果表明,经优化包装的病毒能有效表达目的蛋白IL1RA,拮抗IL1信号通路引起的炎症反应,从而减少软骨基质的降解,起到保护软骨的作用。The results of in vitro functional experiments show that the optimized packaged virus can effectively express the target protein IL1RA, antagonize the inflammatory response caused by IL1 signaling pathway, thereby reducing the degradation of cartilage matrix and protecting cartilage.
实施例4:AAV介导的IL1Ra表达对关节炎的治疗作用Example 4: The therapeutic effect of AAV-mediated expression of IL1Ra on arthritis
如图4所示,切断大鼠一侧膝关节前交叉韧带和摘除部分半月板构建OA模型,造模2周后,关节注射AAV843-B130病毒(低剂量1x1011vg/关节,高剂量1x1012vg/关节),治疗持续2个月。给药后每周测量关节肿胀度,结果如图5A所示,模型组大鼠关节明显比空白对照组肿胀严重,而病毒低剂量组和高剂量组均有效减轻了关节的肿胀。As shown in Figure 4, cut the anterior cruciate ligament of one side of the knee joint and remove part of the meniscus to construct the OA model. After 2 weeks of modeling, the joints were injected with AAV843-B130 virus (low dose 1x10 11 vg/joint, high dose 1x10 12 vg/joint), and the treatment lasted 2 months. The joint swelling was measured weekly after administration. As shown in Figure 5A, the joint swelling of the rats in the model group was significantly more severe than that in the blank control group, and both the low-dose virus group and the high-dose group effectively reduced joint swelling.
治疗结束后,利用Micro-CT机对大鼠关节进行扫描观察病毒的治疗效果。结果显示,相比于模型组,低剂量组和高剂量组治疗的大鼠的关节表面明显更光滑完整(图5B),其中高剂量组的效果更佳。骨小梁参数分析也表明,IL1Ra病毒低剂量组和高剂量组均能有效减轻模型大鼠关节的磨损(图5C),对关节软骨具有一定的保护作用。After the treatment, the Micro-CT machine was used to scan the joints of the rats to observe the therapeutic effect of the virus. The results showed that compared with the model group, the joint surfaces of the rats treated in the low-dose group and the high-dose group were significantly smoother and more complete ( FIG. 5B ), and the effect of the high-dose group was better. Analysis of trabecular bone parameters also showed that both the low-dose and high-dose groups of IL1Ra virus could effectively reduce the wear and tear of the joints of model rats (Fig. 5C), and had a certain protective effect on articular cartilage.
在关节腔注射药物后的第2、4、8周,采取大鼠血清样本,测定炎症因子水平。如图6所示,模型组大鼠血清中炎症因子IL1、IL6、TNFa水平明显增高,而给药后降低了炎症水平,且高剂量降低的效果比低剂量好。At the 2nd, 4th, and 8th weeks after the intra-articular injection of the drug, serum samples of the rats were collected to measure the levels of inflammatory factors. As shown in Figure 6, the levels of inflammatory factors IL1, IL6, and TNFa in the serum of rats in the model group were significantly increased, and the level of inflammation was reduced after administration, and the reduction effect of high dose was better than that of low dose.
治疗8周后,取关节组织进行病理分析。番红O固绿染色结果显示(图7),正常对照组关节软骨染色均匀,表面光滑完整;而模型组的软骨细胞减少,排列紊乱,软骨表面缺损较严重,出现番红部分失染。给药治疗后,明显改善了OA大鼠关节软骨的病理发展进 程,软骨磨损减少。同时,HE染色结果显示(图7),相比于模型组,给药组OA大鼠关节滑膜的炎症浸润明显减少。此外,关节qPCR结果显示,关节腔注AAV843-B130病毒后,IL1RA表达显著升高,且具有剂量依赖性(图8)。After 8 weeks of treatment, joint tissues were taken for pathological analysis. The results of Safranin O Fast Green staining (Figure 7) showed that the articular cartilage in the normal control group was evenly stained and the surface was smooth and complete; while in the model group, the chondrocytes were reduced, the arrangement was disordered, the cartilage surface defect was serious, and some safranin was lost. After drug treatment, the pathological development of articular cartilage in OA rats was significantly improved. process, cartilage wear is reduced. At the same time, the HE staining results showed ( FIG. 7 ), compared with the model group, the inflammatory infiltration of the joint synovium of the OA rats in the administration group was significantly reduced. In addition, the results of joint qPCR showed that after the injection of AAV843-B130 virus into the joint cavity, the expression of IL1RA was significantly increased in a dose-dependent manner (Figure 8).
结果显示,病毒治疗能有效降低造模关节中炎症因子如IL1、IL6、TNFα的表达,并且减少软骨基质降解酶的产生,从而抑制软骨基质蛋白聚糖和二型胶原蛋白的减少。The results showed that virus treatment could effectively reduce the expression of inflammatory factors such as IL1, IL6, and TNFα in the model joints, and reduce the production of cartilage matrix degrading enzymes, thereby inhibiting the reduction of cartilage matrix proteoglycan and type II collagen.
以上结果表明,AAV843-B130病毒关节腔注射后能表达IL1Ra蛋白,有效拮抗IL1炎症因子,发挥抗炎效果,有效保护关节软骨,最终延缓OA的发病进程。The above results show that AAV843-B130 virus can express IL1Ra protein after intra-articular injection, effectively antagonize IL1 inflammatory factor, exert anti-inflammatory effect, effectively protect articular cartilage, and finally delay the pathogenesis of OA.
最后,对病毒进行安全性评价。在病毒关节注射1周时取各组大鼠血液,其中全血用于测血常规,血清用于测肝指标谷丙转氨酶(ALT)和谷草转氨酶(AST)的水平。Finally, the safety evaluation of the virus is carried out. One week after virus joint injection, the blood of rats in each group was collected, and the whole blood was used for blood routine testing, and the serum was used for testing the levels of liver indicators alanine aminotransferase (ALT) and aspartate aminotransferase (AST).
ELISA结果显示,病毒注射1周后,大鼠肝功能ALT、AST水平相对于未注射病毒组无明显变化(图9A)。血常规检测结果显示,病毒注射组大鼠血液中的白细胞数目(WBC)、淋巴细胞百分比(Lymph)、血小板数目(PLT)、中性粒细胞百分比(Gran)、红细胞数目(RBC)和血红蛋白(HGB)与未注射病毒组无显著性差异(图9B),这表明AAV病毒关节注射后对大鼠无明显的毒副作用。The results of ELISA showed that 1 week after the virus injection, the levels of ALT and AST in the liver function of the rats had no significant changes compared with those in the non-injected virus group ( FIG. 9A ). The results of blood routine testing showed that the number of white blood cells (WBC), percentage of lymphocytes (Lymph), number of platelets (PLT), percentage of neutrophils (Gran), number of red blood cells (RBC) and hemoglobin ( HGB) and the non-injected virus group had no significant difference ( FIG. 9B ), which indicated that AAV virus had no obvious toxic and side effects on rats after joint injection.
虽然通过参照本公开的某些优选实施方式,已经对本公开进行了图示和描述,但本领域的普通技术人员应该明白,以上内容是结合具体的实施方式对本公开所作的进一步详细说明,不能认定本公开的具体实施只局限于这些说明。本领域技术人员可以在形式上和细节上对其作各种改变,包括做出若干简单推演或替换,而不偏离本公开的精神和范围。 Although the present disclosure has been illustrated and described with reference to certain preferred embodiments of the present disclosure, those skilled in the art should understand that the above content is a further detailed description of the present disclosure in conjunction with specific embodiments, and cannot be deemed The specific implementation of the present disclosure is limited only by these descriptions. Those skilled in the art may make various changes in form and details, including several simple deduction or substitutions, without departing from the spirit and scope of the present disclosure.

Claims (15)

  1. 编码白介素1受体拮抗蛋白的核酸分子,其核苷酸序列与SEQ ID NO:7或SEQ ID NO:8所示的核苷酸序列具有至少50%的同一性,优选具有至少60%、70%、80%、85%、90%、95%、99%或100%的同一性。A nucleic acid molecule encoding an interleukin-1 receptor antagonist protein whose nucleotide sequence has at least 50% identity, preferably at least 60%, 70% identity to the nucleotide sequence shown in SEQ ID NO: 7 or SEQ ID NO: 8 %, 80%, 85%, 90%, 95%, 99% or 100% identity.
  2. 根据权利要求1所述的核酸分子,其中,所述核酸分子包含SEQ ID NO:7或SEQ ID NO:8所示的核苷酸序列,优选地,所述核酸分子的核苷酸序列如SEQ ID NO:7或SEQ ID NO:8所示。The nucleic acid molecule according to claim 1, wherein the nucleic acid molecule comprises the nucleotide sequence shown in SEQ ID NO: 7 or SEQ ID NO: 8, preferably, the nucleotide sequence of the nucleic acid molecule is as SEQ ID NO: ID NO: 7 or SEQ ID NO: 8.
  3. 转基因表达盒,其包括:启动子、权利要求1或2所述的核酸分子、polyA;优选地,所述polyA为bGH polyA。A transgene expression cassette, comprising: a promoter, the nucleic acid molecule according to claim 1 or 2, and polyA; preferably, the polyA is bGH polyA.
  4. 根据权利要求3所述的转基因表达盒,其中,所述启动子选自:CB启动子、CAG启动子、SV40启动子、胶原蛋白collagen启动子、蛋白聚糖aggrecan启动子、滑膜蛋白基因启动子、脂肪组织特异性启动子PPAR白基因启动子、转录因子SOX9启动子和骨钙蛋白启动子;优选地,所述启动子为CB启动子。The transgenic expression cassette according to claim 3, wherein the promoter is selected from the group consisting of: CB promoter, CAG promoter, SV40 promoter, collagen collagen promoter, proteoglycan aggrecan promoter, synoviolin gene promoter promoter, adipose tissue-specific promoter PPAR white gene promoter, transcription factor SOX9 promoter and osteocalcin promoter; preferably, the promoter is a CB promoter.
  5. 根据权利要求3或4所述的转基因表达盒,其中,所述转基因表达盒还包括:位于启动子之后的内含子,和/或位于两端的两个ITR;优选地,所述内含子选自:SV40内含子、VH4内含子、Chi内含子、U12内含子、RHD内含子等1类内含子,所述两个ITR各自独立地为正常ITR或缩短ITR。The transgene expression cassette according to claim 3 or 4, wherein the transgene expression cassette further comprises: an intron behind the promoter, and/or two ITRs at both ends; preferably, the intron Selected from class 1 introns such as SV40 intron, VH4 intron, Chi intron, U12 intron, RHD intron, and the two ITRs are each independently a normal ITR or a shortened ITR.
  6. 根据权利要求3至5中任一项所述的转基因表达盒,其中,所述转基因表达盒还包括:插入至权利要求1或2所述的核酸分子中的至少一个内含子,优选地,所述内含子选自:SV40内含子、VH4内含子和Chi内含子。The transgene expression cassette according to any one of claims 3 to 5, wherein the transgene expression cassette further comprises: at least one intron inserted into the nucleic acid molecule according to claim 1 or 2, preferably, Said intron is selected from: SV40 intron, VH4 intron and Chi intron.
  7. 根据权利要求3至6中任一项所述的转基因表达盒,其中,所述转基因表达盒的核苷酸序列如SEQ ID NO:10、SEQ ID NO:11、SEQ ID NO:12、SEQ ID NO:13、SEQ ID NO:14、SEQ ID NO:16、SEQ ID NO:17、SEQ ID NO:18、SEQ ID NO:19、SEQ ID NO:20、SEQ ID NO:21或SEQ ID NO:22所示,优选地,所述转基因表达盒的核苷酸 序列如SEQ ID NO:12或SEQ ID NO:19所示,更优选如SEQ ID NO:19所示。The transgene expression cassette according to any one of claims 3 to 6, wherein the nucleotide sequence of the transgene expression cassette is such as SEQ ID NO: 10, SEQ ID NO: 11, SEQ ID NO: 12, SEQ ID NO: 13, SEQ ID NO: 14, SEQ ID NO: 16, SEQ ID NO: 17, SEQ ID NO: 18, SEQ ID NO: 19, SEQ ID NO: 20, SEQ ID NO: 21 or SEQ ID NO: 22, preferably, the nucleotide of the transgene expression cassette The sequence is shown in SEQ ID NO: 12 or SEQ ID NO: 19, more preferably in SEQ ID NO: 19.
  8. 基因递送系统,其包括:权利要求3至7中任一项所述的转基因表达盒和AAV衣壳蛋白。A gene delivery system, comprising: the transgene expression cassette and AAV capsid protein according to any one of claims 3 to 7.
  9. 根据权利要求8所述的基因递送系统,其中,所述AAV衣壳蛋白为天然AAV衣壳蛋白或人工改造的AAV衣壳蛋白;优选地,所述AAV选自:AAV1、AAV2、AAV3、AAV4、AAV5、AAV6、AAV7、AAV8、AAV9、AAV10、AAV11,AAV12、AAV-DJ和AAV843。The gene delivery system according to claim 8, wherein the AAV capsid protein is a natural AAV capsid protein or an artificially modified AAV capsid protein; preferably, the AAV is selected from: AAV1, AAV2, AAV3, AAV4 , AAV5, AAV6, AAV7, AAV8, AAV9, AAV10, AAV11, AAV12, AAV-DJ, and AAV843.
  10. 根据权利要求8或9所述的基因递送系统,其中,所述AAV衣壳蛋白为AAV843,其氨基酸序列如SEQ ID NO:24所示。The gene delivery system according to claim 8 or 9, wherein the AAV capsid protein is AAV843, and its amino acid sequence is as shown in SEQ ID NO: 24.
  11. 权利要求1或2所述的核酸分子、权利要求3至7中任一项所述的转基因表达盒或权利要求8至10中任一项所述的基因递送系统在制备用于治疗疾病的药物中的应用,所述疾病为可通过阻断IL-1信号通路而改善的疾病,如急性炎症疾病、慢性炎症疾病和恶性肿瘤;优选地,所述疾病为关节炎症,包括骨性关节炎、类风湿关节炎、滑膜炎、血友病关节炎和其他炎症引起的关节炎症;更优选地,所述疾病为骨性关节炎。The nucleic acid molecule according to claim 1 or 2, the transgene expression cassette according to any one of claims 3 to 7 or the gene delivery system according to any one of claims 8 to 10 are used in the preparation of medicaments for treating diseases In the application in , the disease is a disease that can be improved by blocking the IL-1 signaling pathway, such as acute inflammatory disease, chronic inflammatory disease and malignant tumor; preferably, the disease is joint inflammation, including osteoarthritis, Rheumatoid arthritis, synovitis, hemophilic arthritis and other inflammatory joint inflammations; more preferably, the disease is osteoarthritis.
  12. 药物,其包含:权利要求1或2所述的核酸分子、权利要求3至7中任一项所述的转基因表达盒或权利要求8至10中任一项所述的基因递送系统,以及赋形剂。A medicine comprising: the nucleic acid molecule according to claim 1 or 2, the transgene expression cassette according to any one of claims 3 to 7 or the gene delivery system according to any one of claims 8 to 10, and Forming agent.
  13. 一种治疗疾病的方法,包括向有需要的受试者施用治疗有效量的权利要求12所述的药物,所述疾病为可通过阻断IL-1信号通路而改善的疾病。A method for treating a disease, comprising administering a therapeutically effective amount of the drug of claim 12 to a subject in need, the disease being a disease that can be improved by blocking IL-1 signaling pathway.
  14. 根据权利要求13所述的方法,其中,所述疾病为急性炎症疾病、慢性炎症疾病和/或恶性肿瘤;优选地,所述疾病为关节炎症,包括骨性关节炎、类风湿关节炎、滑膜炎、血友病关节炎和其他炎症引起的关节炎症;更优选地,所述疾病为骨性关节炎。The method according to claim 13, wherein the disease is acute inflammatory disease, chronic inflammatory disease and/or malignant tumor; preferably, the disease is joint inflammation, including osteoarthritis, rheumatoid arthritis, slippery Meningitis, hemophilic arthritis and other inflammatory joint inflammations; more preferably, the disease is osteoarthritis.
  15. 根据权利要求13或14所述的方法,其中,所述药物通过全身途径或局部途径施用,例如静脉内施用、局部接触和病灶内施用,优选局部施用于关节腔,例如通过关节腔注射。 The method according to claim 13 or 14, wherein the drug is administered systemically or locally, such as intravenous administration, local contact and intralesional administration, preferably locally in the joint cavity, such as through intra-articular injection.
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