WO2023134738A1 - Specific identification primer pair for trionycis carapax and decoction pieces, traditional chinese medicine dispensing granules and other water extract products thereof, use of specific identification primer pair, and identification method - Google Patents

Specific identification primer pair for trionycis carapax and decoction pieces, traditional chinese medicine dispensing granules and other water extract products thereof, use of specific identification primer pair, and identification method Download PDF

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WO2023134738A1
WO2023134738A1 PCT/CN2023/072028 CN2023072028W WO2023134738A1 WO 2023134738 A1 WO2023134738 A1 WO 2023134738A1 CN 2023072028 W CN2023072028 W CN 2023072028W WO 2023134738 A1 WO2023134738 A1 WO 2023134738A1
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turtle
turtle shell
specific identification
chinese medicine
water extract
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PCT/CN2023/072028
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French (fr)
Chinese (zh)
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罗宇琴
李国卫
谭斯尹
刑菊玲
宋叶
魏梅
陈向东
孙冬梅
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广东一方制药有限公司
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    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/11DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
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    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • C12Q1/686Polymerase chain reaction [PCR]
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms

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  • the invention relates to the technical field of quality detection of traditional Chinese medicines, in particular to a pair of specific identification primers for turtle shells and their decoction pieces, traditional Chinese medicine formula granules and other water extract products, and their application and identification method.
  • the turtle shell is derived from the carapace of the soft-shelled turtle (Trionyx sinensis Wiegmann). Turtle shell, first recorded in the "Shen Nong's Materia Medica" in the Han Dynasty, is listed as a middle grade. It has been recorded in successive dynasties of herbal medicines. It has the effects of nourishing yin and subsidizing yang, reducing fever and steaming, softening and resolving hard masses, and is often used for fever due to yin deficiency and steamy bones.
  • Turtle shell is a commonly used traditional Chinese medicine. It is more common to use the same genus and its counterfeit products as turtle shell in the market, such as Chinemys reevesii (Gray), Apalone spinifera (Apalone spinifera) and Florida soft-shelled turtle (Apalone ferox) , Trionyx steindachneri, Lissemys punctata, Trionyx hurum, Flat soft-shelled turtle (also known as Malayan soft-shelled turtle, Dogania subplana), Pelochelys bibroni, Giant soft-shelled turtle ( Trionyx gangeticus) A, African soft-shelled turtle (Trionyx triunguis) A, etc., they are close in character and shape, relying on traditional identification methods is difficult, and the identification accuracy is low, especially processed by vinegar and made into traditional Chinese medicine by water extraction After the standard decoction is further processed into traditional Chinese medicine formula granules, it is more difficult to carry out effective identification due
  • a pair of specific identification primers for turtle shells and its decoction pieces, traditional Chinese medicine formula granules and other water extract products includes a forward primer and a base sequence as shown in SEQ ID NO:1
  • the reverse primer whose sequence is shown in SEQ ID NO:2.
  • a specific identification kit for turtle shell and its decoction pieces, traditional Chinese medicine formula granules and other water extract products, the reagent contains said pair of specific identification primers, and amplification reagents.
  • the amplification reagent comprises amplification buffer, dNTP, DNA polymerase and water; the amplification buffer is 10 ⁇ PCR Buffer I, and the DNA polymerase is Taq enzyme.
  • a specific identification method for turtle shells, turtle shell decoction pieces, turtle shell traditional Chinese medicine formula granules or other turtle shell water extract products comprising the following steps:
  • the specific identification of the sample to be tested according to the obtained separation product includes:
  • the isolated product comprises a 236bp fragment, it means that the sample to be tested comprises turtle shells,
  • the isolated product does not contain a 236bp fragment, it means that the sample to be tested contains fake turtle shells or does not contain turtle shells.
  • the counterfeit turtle shell includes one or more of the turtle shell, horned turtle shell, Florida turtle shell and Shan Rui shell shell.
  • the other turtle shell aqueous extract products include the standard decoction of turtle shell traditional Chinese medicine.
  • the annealing temperature of the amplification is 59°C-61°C.
  • the amplification reaction system includes: 2.5 ⁇ L of 10 ⁇ PCR Buffer I containing Mg 2+ , 2.5 mmol/L dNTP, 10 ⁇ mol/L forward primer, 10 ⁇ mol/L reverse primer, 5 U/ ⁇ L Taq enzyme, 30ng ⁇ 50ng template DNA and 19.2 ⁇ L water.
  • the amplification reaction program includes: 95°C pre-denaturation for 5 minutes; 95°C denaturation for 30 s, 60°C annealing for 30 s, 72°C extension for 30 s, a total of 33 cycles; and finally 72°C extension for 5 min.
  • Fig. 1 is the result of an embodiment of the present invention according to the primers in the references to test the turtle shell and counterfeit samples; in Fig. 1, M.DNA maker DL 1000, 1. Turtle shell medicinal material G2003054, 2. Turtle shell medicinal material G2003056 , 3. Tortoise shell herbal medicine G1810179, 4. Tortoise shell herbal medicine G1810182, 5. Florida soft-shelled turtle medicine G2011026, 6. Florida soft-shelled turtle medicine G2011027, 7. Shanrui soft-shelled turtle medicine G2011028, 8. Blank (ddH 2 O);
  • Fig. 2 is the result of detecting different detection objects by using specific identification primer pairs in an embodiment of the present invention
  • M.DNA maker DL 1000 1. Turtle shell control medicinal material, 2-16. Turtle shell medicinal material, 17 -18. Vinegar turtle shell decoction pieces, 19-25. Turtle shell standard decoction, 26-27. Vinegar turtle shell standard decoction, 28-30. Turtle shell formula granules, 31-32. Vinegar turtle shell formula granules, 33- 34. Tortoise shell medicinal material, 35-36. Horned soft-shelled turtle medicinal material, 37-38. Florida soft-shelled turtle medicinal material, 39. Shanrui soft-shelled soft-shelled turtle medicinal material, N. Blank (ddH 2 O).
  • the first aspect is used for descriptive purposes only, and cannot be understood as indicating or implying relative importance or quantity, nor as implying the importance or importance of the indicated technical features. quantity.
  • the technical features described in open form include closed technical solutions consisting of the enumerated features, as well as open technical solutions including the enumerated features.
  • the percentage content involved in the present invention refers to mass percentage for solid-liquid mixing and solid-solid phase mixing, and refers to volume percentage for liquid-liquid phase mixing.
  • the percentage concentration involved in the present invention refers to the final concentration unless otherwise specified.
  • the final concentration refers to the proportion of the added component in the system after the component is added.
  • the temperature parameters in the present invention allow either constant temperature treatment or treatment within a certain temperature range.
  • the isothermal treatment allows the temperature to fluctuate within the precision of the instrument control.
  • the water extract product involved in the present invention mainly refers to the traditional Chinese medicine product prepared from the water extract of the turtle shell or the decoction pieces of the turtle shell. ) to the turtle shell or turtle shell decoction pieces Line extraction preparations are obtained.
  • the water extract products in the present invention include standard decoctions and traditional Chinese medicine formula granules.
  • CN108018362A discloses a set of specific primers for identifying soft-shelled turtles. This set of specific primers is designed for soft-shelled turtles and soft-shelled turtle medicinal materials. Compared with publicly known specific primers, it can distinguish different species of the same suborder.
  • the identification of counterfeit products can be achieved; in addition, the amplified target product is ⁇ 120bp, but the conditions are applicable to the original turtle methyl, medicinal materials, decoction pieces and their adulterated products.
  • CN103074433A discloses a turtle shell DNA detection kit and an identification method based on the kit.
  • the kit is mainly aimed at medicinal materials, and the genuine turtle shell is identified based on the simultaneous appearance of 1000bp and 500bp bands.
  • PCR there is still a technical gap in the use of PCR to identify water extracts of turtle shells and their decoction pieces.
  • the contriver has provided a kind of specific identification primer pair, uses this primer to amplify the DNA of the to-be-tested turtle shell/Veteria turtle water extract product such as Chinese medicine standard decoction and Chinese medicine formula granules, and the resulting amplified product contains a DNA fragment of about 236bp, while the water extract product corresponding to the counterfeit turtle shell does not contain the DNA fragment of about 236bp. Based on this result, it can be identified whether the water extract product of the turtle shell/vinegar turtle shell to be tested is Turtle shell/Vinegar turtle shell water extract products are authentic.
  • the specific identification primers of the present application are also suitable for raw material identification of turtle shells/vinegar turtle shells.
  • the present invention provides a pair of specific identification primers for turtle shells and its decoction pieces and water extract products
  • the pair of specific identification primers includes a forward primer with a base sequence as shown in SEQ ID NO: 1 and The base sequence is the reverse primer shown in SEQ ID NO:2.
  • the annealing temperature of the primer pair provided by the invention is 59°C-61°C.
  • the specific identification primers provided by the present invention are used to amplify the DNA of the standard Chinese medicine decoction and other water extracts of the turtle shell, and the obtained amplification products can not only be used for the identification of the turtle shell and its decoction pieces, but also for the soft-shelled turtle.
  • the identification of water extract products of A and its decoction pieces (including standard Chinese medicine decoction and Chinese medicine formula granules) distinguishes them from counterfeit water extract products, and solves the problem that water extract products are difficult to identify after losing their form. problem.
  • the specific identification primer pair is used for identification, which has good specificity and high accuracy of results, and provides guarantee for the drug safety and clinical efficacy of the standard Chinese medicine decoction or other water extract products of the turtle shell and its decoction pieces.
  • the present invention provides a specific identification kit for turtle shells and its decoction pieces, traditional Chinese medicine formula granules and other water extract products, said kit comprising the specific identification primer pair described in claim 1, and an extension Reagents.
  • the amplification reagent comprises an amplification buffer, dNTPs, DNA polymerase and water; the The amplification buffer is 10 ⁇ PCR Buffer I, and the DNA polymerase is Taq enzyme. It can be understood that the water in the amplification reagent of the present invention is sterilized water.
  • the present invention provides a specific identification method for turtle shells, turtle shell decoction pieces, turtle shell traditional Chinese medicine formula granules, or other turtle shell water extract products.
  • the specific identification method includes the following steps:
  • the specific identification of the sample to be tested according to the obtained separation product includes:
  • the isolated product comprises a 236bp fragment, it means that the sample to be tested comprises turtle shells,
  • the isolated product does not contain a 236bp fragment, it means that the sample to be tested contains fake turtle shells or does not contain turtle shells.
  • the counterfeit turtle shells described in the present invention can be, but not limited to: tortoise shells, horned turtle shells, Florida turtle shells, and Shanrui shell shells.
  • the other turtle shell aqueous extract products include the standard decoction of turtle shell traditional Chinese medicine.
  • the annealing temperature of the amplification is 59°C-61°C.
  • the amplification reaction system contains: 2.5 ⁇ L 10 ⁇ PCR Buffer I containing Mg 2+ , 2.5 mmol/L dNTP, 10 ⁇ mol/L forward primer, 10 ⁇ mol/L reverse primer, 5 U/ ⁇ L Taq Enzyme, 30ng ⁇ 50ng template DNA and 19.2 ⁇ L water.
  • the amplification reaction program includes: 95°C pre-denaturation for 5 minutes; 95°C denaturation for 30 s, 60°C annealing for 30 s, 72°C extension for 30 s, a total of 33 cycles; and finally 72°C extension for 5 min.
  • the sample to be tested is a turtle shell-like sample or a turtle shell decoction piece-like sample
  • the DNA is extracted using the SDS-proteinase K method.
  • the sample to be tested is a water extract product
  • the DNA is extracted using the CTAB method
  • proteinase K is added to the CTAB extract used in the CTAB method.
  • the water-extracted product of the present invention refers to a product made from turtle shells or turtle shell decoction pieces through decoction and other heating processes, which can be selected from, including but not limited to: turtle shell traditional Chinese medicine standard decoction , Biejia Traditional Chinese Medicine Formula Granules, Vinegar-Biejia Chinese Medicine Standard Decoction and Vinegar-Biejia Traditional Chinese Medicine Formula Granules.
  • the structure is destroyed due to heating, and the degree of DNA degradation is similar to that of ancient DNA samples.
  • the required amount of DNA can be extracted from the damaged DNA to be tested for subsequent amplification.
  • the interference of the excipients contained in the traditional Chinese medicine formula granules on the DNA extraction can be effectively avoided.
  • the decoction pieces described in the present invention can be, but not limited to, the turtle shell.
  • the water-extracted product of the present invention refers to a product made from turtle shells or turtle shell decoction pieces through decoction and other heating processes, which can be selected from, including but not limited to: turtle shell traditional Chinese medicine standard decoction, turtle shell traditional Chinese medicine formula Granules, Vinegar-Biejia Traditional Chinese Medicine Standard Decoction and Vinegar-Biejia Traditional Chinese Medicine Formula Granules.
  • FIG. 1 M.DNA maker DL 1000, 1. Turtle shell medicinal material G2003054, 2. Turtle shell medicinal material G2003056, 3. Tortoise shell medicinal material G1810179, 4. Tortoise shell medicinal material G1810182, 5. Florida soft-shelled turtle medicinal material G2011026, 6. Florida soft-shelled soft-shelled soft-shelled medicinal material G2011027, 7. Shanrui soft-shelled soft-shelled medicinal material G2011028, 8. Blank (ddH 2 O).
  • the BioEdit software was used to perform a homologous comparison of the Cytochrome Oxidase I sequence of the soft-shelled turtle in the GeneBank database.
  • the base sequences of the samples were imported into the Primer Premier 5 software for primer design.
  • the specific site of soft-shelled turtle is C and the others are A or T.
  • the SNP site make the SNP site close to the 3' end of the forward primer, and adjust the primer score and GC by moving the position of the upstream primer. Content, and with the help of Primer Premier 5 software, further adjust the position of the reverse primer, and determine the best combination through the final primer score and product band score.
  • the length of the band of the turtle shell after specific PCR amplification is finally about 236bp.
  • the reaction system for PCR amplification is 25 ⁇ L, including:
  • the reaction system was vortexed to mix and centrifuged briefly. Put the reaction system on the PCR instrument.
  • the amplification program was as follows: pre-denaturation at 95°C for 5 min; denaturation at 95°C for 30 s, annealing at 60°C for 30 s, extension at 72°C for 30 s, a total of 33 cycles; and final extension at 72°C for 5 min.
  • M. DNA maker DL 1000 1. Turtle shell control medicinal material, 2-16. Turtle shell medicinal material, 17-18. Vinegar turtle slices, 19-25. Turtle shell standard decoction, 26-27. Vinegar turtle shell standard decoction, 28-30. Turtle shell formula granules, 31-32. Vinegar soft-shelled turtle formula granules, 33-34. Tortoise shell medicinal material, 35-36. Horned soft-shelled turtle medicinal material, 37-38. Florida soft-shelled turtle medicinal material, 39. Shanrui soft-shelled soft-shelled turtle medicinal material, N. Blank (ddH 2 O).
  • the present invention provides a pair of specific identification primers, and the specific identification primers are used to amplify the DNA of the Chinese medicine formula granules or other water extract products of the turtle shell.
  • the identification of its decoction pieces can also be used for the identification of water extract products of turtle shell and its decoction pieces, such as traditional Chinese medicine standard decoction and traditional Chinese medicine formula granules, so that it can be distinguished from counterfeit water extract products and solve the problem of water extract It is difficult to identify the difficult problem after the product loses its shape.
  • the specific identification primer pair is used for identification, which has good specificity and high accuracy of results, and provides guarantee for the drug safety and clinical efficacy of the water extract products of the turtle shell and its decoction pieces.

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Abstract

The present application relates to a specific identification primer pair for Trionycis carapax and decoction pieces, traditional Chinese medicine dispensing granules and other water extract products thereof, the use of the specific identification primer pair, and an identification method. The specific identification primer pair comprises a forward primer as shown in SEQ ID NO: 1, and a reverse primer as shown in SEQ ID NO: 2.

Description

鳖甲及其饮片、中药配方颗粒和其他水提物制品的特异性鉴别引物对及其应用、鉴别方法The specific identification primer pair of turtle shell and its decoction pieces, traditional Chinese medicine formula granules and other water extract products and its application and identification method
相关申请related application
本申请要求2022年01月14日申请的,申请号为202210044243X,名称为“鳖甲及其饮片、中药配方颗粒和其他水提物制品的特异性鉴别引物对及其应用、鉴别方法”的中国专利申请的优先权,在此将其全文引入作为参考。This application requires an application filed on January 14, 2022, the application number is 202210044243X, and the name is "Tiejia and its decoction pieces, Chinese medicine formula granules and other water extract products. Specific identification primer pairs and their applications and identification methods" China Priority of Patent Application, which is hereby incorporated by reference in its entirety.
技术领域technical field
本发明涉及中药质量检测技术领域,特别涉及一种鳖甲及其饮片、中药配方颗粒和其他水提物制品的特异性鉴别引物对及其应用、鉴别方法。The invention relates to the technical field of quality detection of traditional Chinese medicines, in particular to a pair of specific identification primers for turtle shells and their decoction pieces, traditional Chinese medicine formula granules and other water extract products, and their application and identification method.
背景技术Background technique
中国药典2020年版规定,鳖甲来源鳖科动物鳖(Trionyx sinensis Wiegmann)的背甲。鳖甲,始载于汉代《神农本草经》,列为中品,历代本草都有记载,具有滋阴潜阳、退热除蒸、软坚散结等功效,常用于阴虚发热、骨蒸劳热、阴虚阳亢、头晕目眩、虚风内动、手足瘈疭等症。现代药理学研究证实,鳖甲具有抗肿瘤、免疫调节、抗肝硬化、保肝等作用。According to the 2020 edition of the Chinese Pharmacopoeia, the turtle shell is derived from the carapace of the soft-shelled turtle (Trionyx sinensis Wiegmann). Turtle shell, first recorded in the "Shen Nong's Materia Medica" in the Han Dynasty, is listed as a middle grade. It has been recorded in successive dynasties of herbal medicines. It has the effects of nourishing yin and subsidizing yang, reducing fever and steaming, softening and resolving hard masses, and is often used for fever due to yin deficiency and steamy bones. Heat, deficiency of yin and hyperactivity of yang, dizziness, internal movement of deficiency wind, and dysentery of hands and feet. Modern pharmacological studies have confirmed that turtle shell has anti-tumor, immune regulation, anti-cirrhosis, and liver protection effects.
鳖甲作为常用中药,现市场上以同属和其混伪品做鳖甲药用情况较为普遍,如龟甲(Chinemys reevesii(Gray))、角鳖(Apalone spinifera)甲、佛罗里达鳖(Apalone ferox)甲、山瑞鳖(Trionyx steindachneri)、缘板鳖(Lissemys punctata)甲、宏鳖(Trionyx hurum)甲、平鳖(又称马来鳖,Dogania subplana)甲、鼋(Pelochelys bibroni)甲、巨鳖(Trionyx gangeticus)甲、非洲鳖(Trionyx triunguis)甲等,它们性状接近,形态相似,依靠传统的鉴别方法难度较大,鉴别准确性低,尤其是经过醋制成炮制品、经水提制成中药标准汤剂并进一步加工成中药配方颗粒后,由于失去药材性状,更加难以进行有效的鉴别。为保证鳖甲的临床用药质量和疗效,准确、快速地实现鉴别鳖甲及其饮片的水提取物制品(包括中药标准汤剂和中药配方颗粒)是非常必要的。Turtle shell is a commonly used traditional Chinese medicine. It is more common to use the same genus and its counterfeit products as turtle shell in the market, such as Chinemys reevesii (Gray), Apalone spinifera (Apalone spinifera) and Florida soft-shelled turtle (Apalone ferox) , Trionyx steindachneri, Lissemys punctata, Trionyx hurum, Flat soft-shelled turtle (also known as Malayan soft-shelled turtle, Dogania subplana), Pelochelys bibroni, Giant soft-shelled turtle ( Trionyx gangeticus) A, African soft-shelled turtle (Trionyx triunguis) A, etc., they are close in character and shape, relying on traditional identification methods is difficult, and the identification accuracy is low, especially processed by vinegar and made into traditional Chinese medicine by water extraction After the standard decoction is further processed into traditional Chinese medicine formula granules, it is more difficult to carry out effective identification due to the loss of medicinal properties. In order to ensure the quality and curative effect of Biejiao in clinical use, it is very necessary to accurately and quickly identify the water extract products of Biejiao and its decoction pieces (including standard Chinese medicine decoction and Chinese medicine formula granules).
发明内容Contents of the invention
基于此,根据本申请的各种实施例,提供一种鳖甲及其饮片、中药配方颗粒和其他水提物制品的特异性鉴别引物对,技术方案为:Based on this, according to various embodiments of the present application, a specific identification primer pair for turtle shells and its decoction pieces, Chinese medicine formula granules and other water extract products is provided, and the technical scheme is as follows:
一种鳖甲及其饮片、中药配方颗粒和其他水提物制品的特异性鉴别引物对,所述特异性鉴别引物对包含碱基序列如SEQ ID NO:1所示的正向引物以及碱基序列如SEQ ID NO:2所示的反向引物。A pair of specific identification primers for turtle shells and its decoction pieces, traditional Chinese medicine formula granules and other water extract products, the specific identification primer pair includes a forward primer and a base sequence as shown in SEQ ID NO:1 The reverse primer whose sequence is shown in SEQ ID NO:2.
一种鳖甲及其饮片、中药配方颗粒和其他水提物制品的特异性鉴别试剂盒,所述试剂 盒包含所述的特异性鉴别引物对,以及扩增试剂。A specific identification kit for turtle shell and its decoction pieces, traditional Chinese medicine formula granules and other water extract products, the reagent The box contains said pair of specific identification primers, and amplification reagents.
在其中一个实施例中,所述扩增试剂包含扩增缓冲液、dNTP、DNA聚合酶和水;所述扩增缓冲液为10×PCR Buffer I,所述DNA聚合酶为Taq酶。In one of the embodiments, the amplification reagent comprises amplification buffer, dNTP, DNA polymerase and water; the amplification buffer is 10×PCR Buffer I, and the DNA polymerase is Taq enzyme.
一种鳖甲、鳖甲饮片、鳖甲中药配方颗粒或其他鳖甲水提物制品的特异性鉴别方法,所述特异性鉴别方法包括如下步骤:A specific identification method for turtle shells, turtle shell decoction pieces, turtle shell traditional Chinese medicine formula granules or other turtle shell water extract products, said specific identification method comprising the following steps:
提取待测样品的DNA;Extract the DNA of the sample to be tested;
采用所述的特异性鉴别引物对或者所述的特异性鉴别试剂盒对所述DNA进行扩增,分离所得扩增产物,根据所得分离产物对所述待测样品进行特异性鉴别。Using the pair of specific identification primers or the specific identification kit to amplify the DNA, separate the amplified products obtained, and carry out specific identification on the sample to be tested according to the obtained separated products.
在其中一个实施例中,根据所得分离产物对所述待测样品进行特异性鉴别包括:In one of the embodiments, the specific identification of the sample to be tested according to the obtained separation product includes:
若所述分离产物包含236bp片段,则说明所述待测样品包含鳖甲,If the isolated product comprises a 236bp fragment, it means that the sample to be tested comprises turtle shells,
若所述分离产物不包含236bp片段,则说明所述待测样品包含鳖甲伪品或者不含鳖甲。If the isolated product does not contain a 236bp fragment, it means that the sample to be tested contains fake turtle shells or does not contain turtle shells.
在其中一个实施例中,所述鳖甲伪品包含龟甲、角鳖甲、佛罗里达鳖甲和山瑞鳖甲中的一种或者多种。In one of the embodiments, the counterfeit turtle shell includes one or more of the turtle shell, horned turtle shell, Florida turtle shell and Shan Rui shell shell.
在其中一个实施例中,所述其他鳖甲水提物制品包含鳖甲中药标准汤剂。In one of the embodiments, the other turtle shell aqueous extract products include the standard decoction of turtle shell traditional Chinese medicine.
在其中一个实施例中,扩增的退火温度为59℃~61℃。In one embodiment, the annealing temperature of the amplification is 59°C-61°C.
在其中一个实施例中,扩增的反应体系包含:2.5μL含Mg2+的10×PCR Buffer I、2.5mmol/L dNTP、10μmol/L正向引物、10μmol/L反向引物、5U/μL Taq酶、30ng~50ng模板DNA和19.2μL水。In one embodiment, the amplification reaction system includes: 2.5 μL of 10×PCR Buffer I containing Mg 2+ , 2.5 mmol/L dNTP, 10 μmol/L forward primer, 10 μmol/L reverse primer, 5 U/μL Taq enzyme, 30ng~50ng template DNA and 19.2μL water.
在其中一个实施例中,扩增的反应程序包括:95℃预变性5min;95℃变性30s,60℃退火30s,72℃延伸30s,共33个循环;最后72℃延伸5min。In one embodiment, the amplification reaction program includes: 95°C pre-denaturation for 5 minutes; 95°C denaturation for 30 s, 60°C annealing for 30 s, 72°C extension for 30 s, a total of 33 cycles; and finally 72°C extension for 5 min.
本申请的一个或多个实施例细节在下面的描述中提出,本申请的其他特征、目的和优点将从说明书及其权利要求书变得明显。Details of one or more embodiments of the application are set forth in the following description, and other features, objects, and advantages of the application will become apparent from the description and claims hereof.
附图说明Description of drawings
为了更清楚地说明本申请实施例或传统技术中的技术方案,下面将对实施例或传统技术描述中所需要使用的附图作简单地介绍,显而易见地,下面描述中的附图仅仅是本申请的实施例,对于本领域普通技术人员来讲,在不付出创造性劳动的前提下,还可以根据公开的附图获得其他的附图。In order to more clearly illustrate the technical solutions in the embodiments of the present application or the conventional technology, the following will briefly introduce the accompanying drawings that need to be used in the description of the embodiments or the traditional technology. Obviously, the accompanying drawings in the following description are only the present invention For the embodiments of the application, those skilled in the art can also obtain other drawings based on the disclosed drawings without creative effort.
图1为本发明一个实施例根据参考文献中的引物对鳖甲及伪品样品进行试验的结果;图1中,M.DNA maker DL 1000,1.鳖甲药材G2003054,2.鳖甲药材G2003056,3.龟甲药材G1810179,4.龟甲药材G1810182,5.佛罗里达鳖药材G2011026,6.佛罗里达鳖药材G2011027,7.山瑞鳖药材G2011028,8.空白(ddH2O); Fig. 1 is the result of an embodiment of the present invention according to the primers in the references to test the turtle shell and counterfeit samples; in Fig. 1, M.DNA maker DL 1000, 1. Turtle shell medicinal material G2003054, 2. Turtle shell medicinal material G2003056 , 3. Tortoise shell herbal medicine G1810179, 4. Tortoise shell herbal medicine G1810182, 5. Florida soft-shelled turtle medicine G2011026, 6. Florida soft-shelled turtle medicine G2011027, 7. Shanrui soft-shelled turtle medicine G2011028, 8. Blank (ddH 2 O);
图2为本发明一个实施例采用特异性鉴别引物对对不同检测对象进行检测的结果;图2中,M.DNA maker DL 1000,1.鳖甲对照药材,2-16.鳖甲药材,17-18.醋鳖甲饮片,19-25.鳖甲标准汤剂,26-27.醋鳖甲标准汤剂,28-30.鳖甲配方颗粒,31-32.醋鳖甲配方颗粒,33-34.龟甲药材,35-36.角鳖药材,37-38.佛罗里达鳖药材,39.山瑞鳖药材,N.空白(ddH2O)。Fig. 2 is the result of detecting different detection objects by using specific identification primer pairs in an embodiment of the present invention; in Fig. 2, M.DNA maker DL 1000, 1. Turtle shell control medicinal material, 2-16. Turtle shell medicinal material, 17 -18. Vinegar turtle shell decoction pieces, 19-25. Turtle shell standard decoction, 26-27. Vinegar turtle shell standard decoction, 28-30. Turtle shell formula granules, 31-32. Vinegar turtle shell formula granules, 33- 34. Tortoise shell medicinal material, 35-36. Horned soft-shelled turtle medicinal material, 37-38. Florida soft-shelled turtle medicinal material, 39. Shanrui soft-shelled soft-shelled turtle medicinal material, N. Blank (ddH 2 O).
具体实施方式Detailed ways
下面将结合本申请实施例中的附图,对本申请实施例中的技术方案进行清楚、完整地描述,显然,所描述的实施例仅仅是本申请一部分实施例,而不是全部的实施例。基于本申请中的实施例,本领域普通技术人员在没有做出创造性劳动前提下所获得的所有其他实施例,都属于本申请保护的范围。The following will clearly and completely describe the technical solutions in the embodiments of the application with reference to the drawings in the embodiments of the application. Apparently, the described embodiments are only some of the embodiments of the application, not all of them. Based on the embodiments in this application, all other embodiments obtained by persons of ordinary skill in the art without making creative efforts belong to the scope of protection of this application.
除非另有定义,本文所使用的所有的技术和科学术语与属于本申请的技术领域的技术人员通常理解的含义相同。本文中在本申请的说明书中所使用的术语只是为了描述具体的实施例的目的,不是旨在于限制本申请。Unless otherwise defined, all technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the technical field to which this application belongs. The terms used herein in the specification of the application are only for the purpose of describing specific embodiments, and are not intended to limit the application.
出于说明本发明各种实施方式的目的给出如下实施例,并非意图以任何方式限制本发明。本领域技术人员将理解,如权利要求的范围所限定的,其中的变化和其它用途包括在本发明精神范围内。下列实施例中所使用的材料、试剂等,如无特殊说明,均可从商业途径得到,实施例中所提到的启动子和终止子序列也可以从NCBI下载获得,具体序列起始位置可根据引物表中的引物获悉。下列实施例中未注明具体条件的实验方法,通常按照常规条件,例如Sambrook等人,分子克隆:实验室手册(New York:Cold Spring HarborLaboratory Press,1989)中所述的条件,或按照制造厂商所建议的条件。The following examples are given for the purpose of illustrating various embodiments of the invention and are not intended to limit the invention in any way. Those skilled in the art will appreciate that changes and other uses therein are included within the spirit of the invention, as defined by the scope of the claims. The materials and reagents used in the following examples can be obtained from commercial sources unless otherwise specified. The promoter and terminator sequences mentioned in the examples can also be downloaded from NCBI. The starting position of the specific sequence can be found in Learned from the primers in the primer table. The experimental method that does not indicate specific condition in the following examples, usually according to conventional conditions, such as Sambrook et al., molecular cloning: the conditions described in the laboratory manual (New York: Cold Spring Harbor Laboratory Press, 1989), or according to the manufacturer suggested conditions.
本发明中,“第一方面”、“第二方面”等仅用于描述目的,不能理解为指示或暗示相对重要性或数量,也不能理解为隐含指明所指示的技术特征的重要性或数量。In the present invention, "the first aspect", "the second aspect" and so on are used for descriptive purposes only, and cannot be understood as indicating or implying relative importance or quantity, nor as implying the importance or importance of the indicated technical features. quantity.
本发明中,以开放式描述的技术特征中,包括所列举特征组成的封闭式技术方案,也包括包含所列举特征的开放式技术方案。In the present invention, the technical features described in open form include closed technical solutions consisting of the enumerated features, as well as open technical solutions including the enumerated features.
本发明中涉及的百分比含量,如无特别说明,对于固液混合和固相-固相混合均指质量百分比,对于液相-液相混合指体积百分比。The percentage content involved in the present invention, unless otherwise specified, refers to mass percentage for solid-liquid mixing and solid-solid phase mixing, and refers to volume percentage for liquid-liquid phase mixing.
本发明中涉及的百分比浓度,如无特别说明,均指终浓度。所述终浓度,指添加成分在添加该成分后的体系中的占比。The percentage concentration involved in the present invention refers to the final concentration unless otherwise specified. The final concentration refers to the proportion of the added component in the system after the component is added.
本发明中的温度参数,如无特别限定,既允许为恒温处理,也允许在一定温度区间内进行处理。所述的恒温处理允许温度在仪器控制的精度范围内进行波动。The temperature parameters in the present invention, unless otherwise specifically limited, allow either constant temperature treatment or treatment within a certain temperature range. The isothermal treatment allows the temperature to fluctuate within the precision of the instrument control.
本发明所涉及水提物制品主要是指用鳖甲或者鳖甲饮片的水提物制备的中药制品,该水提物是通过在加热的条件下以水为提取水剂(例如:用水煎煮)对鳖甲或者鳖甲饮片进 行提取制备得到的。本发明中的水提物制品包括标准汤剂、中药配方颗粒。The water extract product involved in the present invention mainly refers to the traditional Chinese medicine product prepared from the water extract of the turtle shell or the decoction pieces of the turtle shell. ) to the turtle shell or turtle shell decoction pieces Line extraction preparations are obtained. The water extract products in the present invention include standard decoctions and traditional Chinese medicine formula granules.
传统的基于PCR鉴别鳖甲的技术方案主要局限于鳖甲药材及鳖甲饮片的鉴别。例如:CN108018362A公开的一组鉴定鳖甲的特异性引物,该组特异性引物针对鳖甲及佛罗里达鳖药材设计,与公开已知的特异性引物相比,能对同一亚目的不同物种进行区分,可以实现对伪品的区分;此外,扩增的目的产物≤120bp,但条件适用于鳖甲基原、药材、饮片及其掺伪品。再例如:CN103074433A公开一种鳖甲DNA检测试剂盒及基于该试剂盒的鉴定方法,该试剂盒主要针对药材,以同时出现1000bp和500bp条带为依据来鉴别正品鳖甲。然而,采用PCR鉴别鳖甲及其饮片的水提物制品还存在技术空白。The traditional PCR-based technical solutions for the identification of soft-shelled turtles are mainly limited to the identification of soft-shelled turtle shells medicinal materials and soft-shelled turtle shells. For example: CN108018362A discloses a set of specific primers for identifying soft-shelled turtles. This set of specific primers is designed for soft-shelled turtles and soft-shelled turtle medicinal materials. Compared with publicly known specific primers, it can distinguish different species of the same suborder. The identification of counterfeit products can be achieved; in addition, the amplified target product is ≤120bp, but the conditions are applicable to the original turtle methyl, medicinal materials, decoction pieces and their adulterated products. Another example: CN103074433A discloses a turtle shell DNA detection kit and an identification method based on the kit. The kit is mainly aimed at medicinal materials, and the genuine turtle shell is identified based on the simultaneous appearance of 1000bp and 500bp bands. However, there is still a technical gap in the use of PCR to identify water extracts of turtle shells and their decoction pieces.
相对于将PCR技术用于鳖甲药材及鳖甲饮片的鉴别,采用PCR技术鉴别鳖甲及其饮片的水提物制品和配方颗粒的难度要大得多,因此,目前鳖甲/醋鳖甲的中药标准汤剂和中药配方颗粒的特异性PCR鉴别暂未见报道。在该情况下,参考传统的DNA样本设计引物、扩增的方法往往难以获得理想结果,因此适用于鳖甲/醋鳖甲的药材和饮片的PCR鉴定方法难以适用于相应中药标准汤剂和中药配方颗粒。Compared with using PCR technology to identify the medicinal materials and decoction pieces of turtle shells, it is much more difficult to use PCR technology to identify the water extract products and formula granules of turtle shells and their decoction pieces. The specific PCR identification of traditional Chinese medicine standard decoction and traditional Chinese medicine formula granules has not been reported yet. In this case, it is often difficult to obtain ideal results by referring to traditional DNA sample design primers and amplification methods. Therefore, it is difficult to apply the PCR identification method for the medicinal materials and decoction pieces of the turtle shell/vinegar turtle shell to the corresponding traditional Chinese medicine standard decoction and traditional Chinese medicine. Formula granules.
为此,发明人提供了一种特异性鉴别引物对,用该引物对对待测鳖甲/醋鳖甲水提物制品如中药标准汤剂和中药配方颗粒的DNA进行扩增,所得扩增产物中包含一约236bp的DNA片段,而鳖甲伪品对应的水提物制品则不含该约236bp的DNA片段,据此结果可以鉴别出待测鳖甲/醋鳖甲水提物制品是否为鳖甲/醋鳖甲水提物制品的正品。同时,本申请的特异性鉴别引物也适用于鳖甲/醋鳖甲的原料鉴别。For this reason, the contriver has provided a kind of specific identification primer pair, uses this primer to amplify the DNA of the to-be-tested turtle shell/Veteria turtle water extract product such as Chinese medicine standard decoction and Chinese medicine formula granules, and the resulting amplified product contains a DNA fragment of about 236bp, while the water extract product corresponding to the counterfeit turtle shell does not contain the DNA fragment of about 236bp. Based on this result, it can be identified whether the water extract product of the turtle shell/vinegar turtle shell to be tested is Turtle shell/Vinegar turtle shell water extract products are authentic. At the same time, the specific identification primers of the present application are also suitable for raw material identification of turtle shells/vinegar turtle shells.
第一方面,本发明提供一种鳖甲及其饮片和水提物制品的特异性鉴别引物对,所述特异性鉴别引物对包含碱基序列如SEQ ID NO:1所示的正向引物以及碱基序列如SEQ ID NO:2所示的反向引物。In the first aspect, the present invention provides a pair of specific identification primers for turtle shells and its decoction pieces and water extract products, the pair of specific identification primers includes a forward primer with a base sequence as shown in SEQ ID NO: 1 and The base sequence is the reverse primer shown in SEQ ID NO:2.
本发明提供的引物对,其退火温度为59℃~61℃。The annealing temperature of the primer pair provided by the invention is 59°C-61°C.
采用本发明提供的特异性鉴别引物对对鳖甲的中药标准汤剂及其他水提取物制品DNA进行扩增,所得扩增产物不仅能用于鳖甲及其饮片的鉴别,还能用于鳖甲及其饮片的水提取物制品(包括中药标准汤剂和中药配方颗粒)的鉴别,使其与伪品的水提取物制品区别开来,解决了水提取物制品在失去形态后难以鉴别的难题。以该特异性鉴别引物对进行鉴别,专属性好,结果准确度高,为鳖甲及其饮片的中药标准汤剂或其他水提取物制品的用药安全与临床疗效提供保障。The specific identification primers provided by the present invention are used to amplify the DNA of the standard Chinese medicine decoction and other water extracts of the turtle shell, and the obtained amplification products can not only be used for the identification of the turtle shell and its decoction pieces, but also for the soft-shelled turtle. The identification of water extract products of A and its decoction pieces (including standard Chinese medicine decoction and Chinese medicine formula granules) distinguishes them from counterfeit water extract products, and solves the problem that water extract products are difficult to identify after losing their form. problem. The specific identification primer pair is used for identification, which has good specificity and high accuracy of results, and provides guarantee for the drug safety and clinical efficacy of the standard Chinese medicine decoction or other water extract products of the turtle shell and its decoction pieces.
第二方面,本发明提供一种鳖甲及其饮片、中药配方颗粒和其他水提物制品的特异性鉴别试剂盒,所述试剂盒包含权利要求1所述的特异性鉴别引物对,以及扩增试剂。In the second aspect, the present invention provides a specific identification kit for turtle shells and its decoction pieces, traditional Chinese medicine formula granules and other water extract products, said kit comprising the specific identification primer pair described in claim 1, and an extension Reagents.
在其中一个示例中,所述扩增试剂包含扩增缓冲液、dNTP、DNA聚合酶和水;所述 扩增缓冲液为10×PCR Buffer I,所述DNA聚合酶为Taq酶。可以理解的是,本发明所述扩增试剂中的水为灭菌水。In one example, the amplification reagent comprises an amplification buffer, dNTPs, DNA polymerase and water; the The amplification buffer is 10×PCR Buffer I, and the DNA polymerase is Taq enzyme. It can be understood that the water in the amplification reagent of the present invention is sterilized water.
第三方面,本发明提供一种鳖甲、鳖甲饮片、鳖甲中药配方颗粒或其他鳖甲水提物制品的特异性鉴别方法,所述特异性鉴别方法包括如下步骤:In the third aspect, the present invention provides a specific identification method for turtle shells, turtle shell decoction pieces, turtle shell traditional Chinese medicine formula granules, or other turtle shell water extract products. The specific identification method includes the following steps:
提取待测样品的DNA;Extract the DNA of the sample to be tested;
采用所述的特异性鉴别引物对或者所述的特异性鉴别试剂盒对所述DNA进行扩增,分离所得扩增产物,根据所得分离产物对所述待测样品进行特异性鉴别。Using the pair of specific identification primers or the specific identification kit to amplify the DNA, separate the amplified products obtained, and carry out specific identification on the sample to be tested according to the obtained separated products.
本发明提供的特异性鉴别方法中,根据所得分离产物对所述待测样品进行特异性鉴别包括:In the specific identification method provided by the present invention, the specific identification of the sample to be tested according to the obtained separation product includes:
若所述分离产物包含236bp片段,则说明所述待测样品包含鳖甲,If the isolated product comprises a 236bp fragment, it means that the sample to be tested comprises turtle shells,
若所述分离产物不包含236bp片段,则说明所述待测样品包含鳖甲伪品或者不含鳖甲。If the isolated product does not contain a 236bp fragment, it means that the sample to be tested contains fake turtle shells or does not contain turtle shells.
本发明所述的鳖甲伪品,可以为,包括但不限于:龟甲、角鳖甲、佛罗里达鳖甲、山瑞鳖甲。The counterfeit turtle shells described in the present invention can be, but not limited to: tortoise shells, horned turtle shells, Florida turtle shells, and Shanrui shell shells.
在其中一个示例中,所述其他鳖甲水提物制品包含鳖甲中药标准汤剂。In one example, the other turtle shell aqueous extract products include the standard decoction of turtle shell traditional Chinese medicine.
在其中一个示例中,扩增的退火温度为59℃~61℃。In one example, the annealing temperature of the amplification is 59°C-61°C.
在其中一个示例中,扩增的反应体系包含:2.5μL含Mg2+的10×PCR Buffer I、2.5mmol/L dNTP、10μmol/L正向引物、10μmol/L反向引物、5U/μL Taq酶、30ng~50ng模板DNA和19.2μL水。In one example, the amplification reaction system contains: 2.5 μL 10×PCR Buffer I containing Mg 2+ , 2.5 mmol/L dNTP, 10 μmol/L forward primer, 10 μmol/L reverse primer, 5 U/μL Taq Enzyme, 30ng~50ng template DNA and 19.2 μL water.
在其中一个示例中,扩增的反应程序包括:95℃预变性5min;95℃变性30s,60℃退火30s,72℃延伸30s,共33个循环;最后72℃延伸5min。In one example, the amplification reaction program includes: 95°C pre-denaturation for 5 minutes; 95°C denaturation for 30 s, 60°C annealing for 30 s, 72°C extension for 30 s, a total of 33 cycles; and finally 72°C extension for 5 min.
在其中一个示例中,所述待测样品为鳖甲样待测品或者鳖甲饮片样待测品,提取所述DNA采用SDS-蛋白酶K法。In one example, the sample to be tested is a turtle shell-like sample or a turtle shell decoction piece-like sample, and the DNA is extracted using the SDS-proteinase K method.
在其中一个示例中,所述待测样品为水提物制品,提取所述DNA采用CTAB法,所述CTAB法采用的CTAB提取液中添加有蛋白酶K。如上提到的,本发明所述的水提取制品是指鳖甲或鳖甲饮片在水中经煎煮等加热工序炮制而成的产品,可以选自,包括但不限于:鳖甲中药标准汤剂、鳖甲中药配方颗粒、醋鳖甲中药标准汤剂和醋鳖甲中药配方颗粒。这些水提取制品,其在制备过程中,由于加热使其结构破坏,DNA降解程度类似古DNA样品。采用本发明的提取DNA的方法,能够从DNA破坏的待测品中提到所需含量的DNA用于后续扩增。并且,采用所述的CTAB法提取DNA的过程中,能够有效避免中药配方颗粒中所含辅料对DNA提取带来的干扰。In one example, the sample to be tested is a water extract product, the DNA is extracted using the CTAB method, and proteinase K is added to the CTAB extract used in the CTAB method. As mentioned above, the water-extracted product of the present invention refers to a product made from turtle shells or turtle shell decoction pieces through decoction and other heating processes, which can be selected from, including but not limited to: turtle shell traditional Chinese medicine standard decoction , Biejia Traditional Chinese Medicine Formula Granules, Vinegar-Biejia Chinese Medicine Standard Decoction and Vinegar-Biejia Traditional Chinese Medicine Formula Granules. During the preparation process of these water-extracted products, the structure is destroyed due to heating, and the degree of DNA degradation is similar to that of ancient DNA samples. By adopting the method for extracting DNA of the present invention, the required amount of DNA can be extracted from the damaged DNA to be tested for subsequent amplification. Moreover, during the DNA extraction process using the CTAB method, the interference of the excipients contained in the traditional Chinese medicine formula granules on the DNA extraction can be effectively avoided.
本发明所述的饮片可以为,但不限于醋鳖甲。 The decoction pieces described in the present invention can be, but not limited to, the turtle shell.
本发明所述的水提取制品是指鳖甲或鳖甲饮片在水中经煎煮等加热工序炮制而成的产品,可以选自,包括但不限于:鳖甲中药标准汤剂、鳖甲中药配方颗粒、醋鳖甲中药标准汤剂和醋鳖甲中药配方颗粒。The water-extracted product of the present invention refers to a product made from turtle shells or turtle shell decoction pieces through decoction and other heating processes, which can be selected from, including but not limited to: turtle shell traditional Chinese medicine standard decoction, turtle shell traditional Chinese medicine formula Granules, Vinegar-Biejia Traditional Chinese Medicine Standard Decoction and Vinegar-Biejia Traditional Chinese Medicine Formula Granules.
实施例1Example 1
一、样品列表1. Sample list
表1

Table 1

二、药材、冻干粉及中药配方颗粒的DNA的提取2. Extraction of DNA from medicinal materials, freeze-dried powder and traditional Chinese medicine formula granules
(1)药材和饮片的DNA的提取(1) DNA extraction of medicinal materials and decoction pieces
取鳖甲药材、醋鳖甲饮片及常见伪品0.05g,研磨使成粉末,置2mL离心管中,加入1.0mL SDS裂解液(50mmol/L Tris-HCl,200mmol/L NaCl,250mmol/L EDTA,1%SDS)和10μL蛋白酶K,涡旋振荡混匀后于56℃孵育4小时~6小时。Take 0.05g of turtle shell medicinal materials, vinegar slices of turtle shell and common counterfeit products, grind them into powder, put them in a 2mL centrifuge tube, add 1.0mL of SDS lysate (50mmol/L Tris-HCl, 200mmol/L NaCl, 250mmol/L EDTA , 1% SDS) and 10 μL of proteinase K, vortexed to mix well, and incubated at 56° C. for 4 hours to 6 hours.
取出,冷却至室温,加入等体积的氯仿-异戊醇(体积比24:1),充分混匀呈乳白色,4℃离心(转速为每分钟12000转)10分钟,吸取上清液800μL~1000μL于新的2mL离心管中,自“加入等体积的氯仿-异戊醇(体积比24:1)”起重复操作一次。吸取上清液600μL~800μL,自“加入等体积的氯仿-异戊醇(体积比24:1)”起重复操作一次。吸取上清液400μL~600μL于1.5mL离心管中,加入等体积异丙醇,在零下20℃静置60~90分钟。取出,离心(转速为每分钟12000转)5分钟,弃上清液,用75%(v/v)乙醇洗涤沉淀3次,再用无水乙醇洗涤沉淀1次,在37℃下孵育30分钟,待乙醇挥发后,加灭菌水50μL使溶解,作为供试品溶液,置4℃保存或置零下20℃长期保存。 Take it out, cool it to room temperature, add an equal volume of chloroform-isoamyl alcohol (volume ratio 24:1), mix thoroughly until it becomes milky white, centrifuge at 4°C (12,000 rpm) for 10 minutes, and absorb 800 μL to 1000 μL of the supernatant In a new 2mL centrifuge tube, repeat the operation once from "adding an equal volume of chloroform-isoamyl alcohol (volume ratio 24:1)". Aspirate 600 μL-800 μL of the supernatant, and repeat the operation once from “adding an equal volume of chloroform-isoamyl alcohol (volume ratio 24:1)”. Pipette 400 μL to 600 μL of the supernatant into a 1.5 mL centrifuge tube, add an equal volume of isopropanol, and let stand at minus 20°C for 60 to 90 minutes. Take it out, centrifuge (rotating at 12,000 rpm) for 5 minutes, discard the supernatant, wash the precipitate with 75% (v/v) ethanol three times, then wash the precipitate once with absolute ethanol, and incubate at 37°C for 30 minutes , After the ethanol volatilizes, add 50 μL of sterilized water to dissolve, as the test solution, store at 4°C or store at minus 20°C for a long time.
(2)中药标准汤剂和中药配方颗粒的DNA的提取(2) DNA extraction of standard Chinese medicine decoction and Chinese medicine formula granules
取醋鳖甲冻干粉、配方颗粒样品0.1g,研磨使成粉末,置2mL离心管中,加入1.2mL56℃预热的CTAB沉淀液,混匀,56℃水浴加热60min,冷却至室温后,以12000r/min离心5min,弃上清液,再加入CTAB沉淀液1.2mL同法操作。向该离心管中依次加入900μL CTAB提取液、10μL蛋白酶K、10μLβ-巯基乙醇,混匀,65℃水浴加热120min。取出离心管,待冷却至室温后加入等体积的氯仿-异戊醇(体积比24﹕1),涡旋混匀,以12000r/min,4℃离心10min,取上清液800μL加入新的2mL离心管中,重复操作一次,再取上清液600μL于1.5mL离心管中,加入等体积异丙醇或异丙醇-3mol/L乙酸钠,于-20℃静置60min。取出该离心管以12000r/min离心5min,弃上清液,分别用75%乙醇洗涤沉淀3次及无水乙醇洗涤2次,以12000r/min离心5min,弃上清液,沉淀于37℃孵育30min,待乙醇挥发后,加灭菌水30μL使溶解,置4℃保存或置零下20℃长期保存。Take 0.1 g of the freeze-dried powder and formula granules of vinegar turtle, grind them into powder, put them in a 2 mL centrifuge tube, add 1.2 mL of CTAB precipitation solution preheated at 56 °C, mix well, heat in a water bath at 56 °C for 60 min, and cool to room temperature. Centrifuge at 12000r/min for 5min, discard the supernatant, then add 1.2mL of CTAB precipitation solution and operate in the same way. Add 900 μL CTAB extract, 10 μL proteinase K, and 10 μL β-mercaptoethanol to the centrifuge tube in sequence, mix well, and heat in a water bath at 65°C for 120 min. Take out the centrifuge tube, add an equal volume of chloroform-isoamyl alcohol (volume ratio 24:1) after cooling to room temperature, vortex and mix well, centrifuge at 12000r/min, 4°C for 10min, take 800μL of the supernatant and add a new 2mL In the centrifuge tube, repeat the operation once, and then take 600 μL of the supernatant into a 1.5 mL centrifuge tube, add an equal volume of isopropanol or isopropanol-3mol/L sodium acetate, and let stand at -20°C for 60 min. Take out the centrifuge tube and centrifuge at 12000r/min for 5min, discard the supernatant, wash the pellet three times with 75% ethanol and two times with absolute ethanol, centrifuge at 12000r/min for 5min, discard the supernatant, and incubate the pellet at 37°C After 30 minutes, after the ethanol has evaporated, add 30 μL of sterilized water to dissolve, store at 4°C or store at minus 20°C for a long time.
(3)DNA浓度测定(3) DNA concentration measurement
取上述DNA样品,采用BioSpec-nano微量紫外分光光度计测定DNA浓度,同时记录OD260/OD230,OD260/OD280,并调整浓度到50ng/μL~100ng/μL。Take the above DNA samples, measure DNA concentration with BioSpec-nano micro-volume UV spectrophotometer, record OD260/OD230, OD260/OD280 at the same time, and adjust the concentration to 50ng/μL~100ng/μL.
三、鉴别3. Identification
(1)序列分析及引物设计(1) Sequence analysis and primer design
根据参考文献中的引物对鳖甲及伪品样品进行试验,结果见图1,图1中,M.DNA maker DL 1000,1.鳖甲药材G2003054,2.鳖甲药材G2003056,3.龟甲药材G1810179,4.龟甲药材G1810182,5.佛罗里达鳖药材G2011026,6.佛罗里达鳖药材G2011027,7.山瑞鳖药材G2011028,8.空白(ddH2O)。According to the primers in the references, the samples of turtle shell and counterfeit products were tested, and the results are shown in Figure 1. In Figure 1, M.DNA maker DL 1000, 1. Turtle shell medicinal material G2003054, 2. Turtle shell medicinal material G2003056, 3. Tortoise shell medicinal material G1810179, 4. Tortoise shell medicinal material G1810182, 5. Florida soft-shelled turtle medicinal material G2011026, 6. Florida soft-shelled soft-shelled soft-shelled medicinal material G2011027, 7. Shanrui soft-shelled soft-shelled medicinal material G2011028, 8. Blank (ddH 2 O).
注:文献引物来自[1]程素倩,袁媛,刘富艳,等.特异性PCR方法鉴别鳖甲药材和饮片[J].中国中药杂志,2018,43(23):4569-4574.Note: The literature primers are from [1] Cheng Suqian, Yuan Yuan, Liu Fuyan, et al. Specific PCR method to identify the medicinal materials and decoction pieces of turtle shell [J]. Chinese Journal of Traditional Chinese Medicine, 2018, 43(23): 4569-4574.
[2]李楠,虞平添,焦兆群,等.特异性扩增技术鉴定龟甲与鳖甲[J].中成药,2018,40(10):2328-2333.[2] Li Nan, Yu Pingtian, Jiao Zhaoqun, et al. Identification of tortoise shell and turtle shell by specific amplification technology [J]. Chinese Patent Medicine, 2018, 40(10): 2328-2333.
表2
Table 2
根据图1可知,参考文献中的引物并未能实现本研究的鳖甲特异性鉴别,故对鳖甲特 异性引物进行重新设计。According to Figure 1, it can be seen that the primers in the references did not achieve the specific identification of the turtle shell in this study, so the specific The opposite-sex primers were redesigned.
以中国药典2020年版鳖的Cytochrome Oxidase I序列分析为基础,利用BioEdit软件对GeneBank数据库中鳖的Cytochrome Oxidase I序列进行同源比对,校对后分析鳖的特异性SNP位点,将包含SNP位点的碱基序列导入到Primer Premier 5软件中,进行引物设计。Based on the analysis of the Cytochrome Oxidase I sequence of the soft-shelled turtle in the Chinese Pharmacopoeia 2020 edition, the BioEdit software was used to perform a homologous comparison of the Cytochrome Oxidase I sequence of the soft-shelled turtle in the GeneBank database. The base sequences of the samples were imported into the Primer Premier 5 software for primer design.
经序列对比发现,鳖的特异性位点为C而其他为A或T,确定该SNP位点后,使SNP位点接近正向引物3’端,通过移动上游引物位置,调节引物得分及GC含量,并借助Primer Premier 5软件,进一步调节反向引物位置,通过最终引物评分、产物条带得分以确定最佳组合。After sequence comparison, it is found that the specific site of soft-shelled turtle is C and the others are A or T. After determining the SNP site, make the SNP site close to the 3' end of the forward primer, and adjust the primer score and GC by moving the position of the upstream primer. Content, and with the help of Primer Premier 5 software, further adjust the position of the reverse primer, and determine the best combination through the final primer score and product band score.
表3
table 3
考虑到经高温提取后,对DNA碱基序列的破坏作用,最终得到经特异性PCR扩增后,鳖甲的条带长度约为236bp。Considering the damage to the DNA base sequence after high temperature extraction, the length of the band of the turtle shell after specific PCR amplification is finally about 236bp.
(2)PCR扩增及电泳(2) PCR amplification and electrophoresis
PCR扩增的反应体系为25μL,包括:
The reaction system for PCR amplification is 25 μL, including:
将反应体系振荡混匀,瞬时离心。将反应体系置PCR仪上。The reaction system was vortexed to mix and centrifuged briefly. Put the reaction system on the PCR instrument.
其扩增程序为:95℃预变性5min;95℃变性30s,60℃退火30s,72℃延伸30s,共33个循环;最后72℃延伸5min。The amplification program was as follows: pre-denaturation at 95°C for 5 min; denaturation at 95°C for 30 s, annealing at 60°C for 30 s, extension at 72°C for 30 s, a total of 33 cycles; and final extension at 72°C for 5 min.
待PCR扩增反应结束后,向反应体系加5μL 6×loading buffer,混匀,取混合产物8μL点样于1.5%(w/v)的琼脂糖凝胶上,于150V电压的条件下电泳25min,经GelRed显色,最后于凝胶成像仪观察记录结果。After the PCR amplification reaction is over, add 5 μL of 6×loading buffer to the reaction system, mix well, take 8 μL of the mixed product and spot on 1.5% (w/v) agarose gel, and electrophoresis at 150V for 25 minutes , developed by GelRed, and finally observed and recorded on the gel imager.
结果见图2,图2中,M.DNA maker DL 1000,1.鳖甲对照药材,2-16.鳖甲药材,17-18.醋鳖甲饮片,19-25.鳖甲标准汤剂,26-27.醋鳖甲标准汤剂,28-30.鳖甲配方颗粒,31-32. 醋鳖甲配方颗粒,33-34.龟甲药材,35-36.角鳖药材,37-38.佛罗里达鳖药材,39.山瑞鳖药材,N.空白(ddH2O)。The results are shown in Figure 2. In Figure 2, M. DNA maker DL 1000, 1. Turtle shell control medicinal material, 2-16. Turtle shell medicinal material, 17-18. Vinegar turtle slices, 19-25. Turtle shell standard decoction, 26-27. Vinegar turtle shell standard decoction, 28-30. Turtle shell formula granules, 31-32. Vinegar soft-shelled turtle formula granules, 33-34. Tortoise shell medicinal material, 35-36. Horned soft-shelled turtle medicinal material, 37-38. Florida soft-shelled turtle medicinal material, 39. Shanrui soft-shelled soft-shelled turtle medicinal material, N. Blank (ddH 2 O).
根据图2可知:在200bp~300bp处,鳖甲药材、醋鳖甲饮片、鳖甲标准汤剂、醋鳖甲标准汤剂、鳖甲配方颗粒、醋鳖甲配方颗粒在与鳖甲对照药材的相同位置上有单一的条带,而其他伪品和空白均没有条带出现。According to Figure 2, it can be known that at 200bp-300bp, the differences between the turtle shell medicinal material, vinegared turtle shell decoction pieces, turtle shell standard decoction, vinegar turtle shell standard decoction, turtle shell formula granules, and vinegar turtle shell formula granules were compared with the turtle shell control medicinal materials. There is a single band at the same location, while none of the other shams and blanks appear.
综上,本发明提供了特异性鉴别引物对,采用该特异性鉴别引物对对鳖甲的中药配方颗粒剂或其他水提取物制品DNA进行扩增,所得扩增产物不仅能用于鳖甲及其饮片的鉴别,还能用于鳖甲及其饮片的水提取物制品如中药标准汤剂和中药配方颗粒的鉴别,使其与伪品的水提取物制品区别开来,解决了水提取物制品在失去形态后难以鉴别的难题。以该特异性鉴别引物对进行鉴别,专属性好,结果准确度高,为鳖甲及其饮片的水提取物制品的用药安全与临床疗效提供保障。In summary, the present invention provides a pair of specific identification primers, and the specific identification primers are used to amplify the DNA of the Chinese medicine formula granules or other water extract products of the turtle shell. The identification of its decoction pieces can also be used for the identification of water extract products of turtle shell and its decoction pieces, such as traditional Chinese medicine standard decoction and traditional Chinese medicine formula granules, so that it can be distinguished from counterfeit water extract products and solve the problem of water extract It is difficult to identify the difficult problem after the product loses its shape. The specific identification primer pair is used for identification, which has good specificity and high accuracy of results, and provides guarantee for the drug safety and clinical efficacy of the water extract products of the turtle shell and its decoction pieces.
以上所述实施例的各技术特征可以进行任意的组合,为使描述简洁,未对上述实施例中的各个技术特征所有可能的组合都进行描述,然而,只要这些技术特征的组合不存在矛盾,都应当认为是本说明书记载的范围。The technical features of the above-mentioned embodiments can be combined arbitrarily. To make the description concise, all possible combinations of the technical features in the above-mentioned embodiments are not described. However, as long as there is no contradiction in the combination of these technical features, should be considered as within the scope of this specification.
以上所述实施例仅表达了本申请的几种实施方式,其描述较为具体和详细,但并不能因此而理解为对申请专利范围的限制。应当指出的是,对于本领域的普通技术人员来说,在不脱离本申请构思的前提下,还可以做出若干变形和改进,这些都属于本申请的保护范围。因此,本申请专利的保护范围应以所附权利要求为准。 The above-mentioned embodiments only express several implementation modes of the present application, and the description thereof is relatively specific and detailed, but should not be construed as limiting the scope of the patent application. It should be noted that those skilled in the art can make several modifications and improvements without departing from the concept of the present application, and these all belong to the protection scope of the present application. Therefore, the scope of protection of the patent application should be based on the appended claims.

Claims (10)

  1. 一种鳖甲及其饮片、中药配方颗粒和其他水提物制品的特异性鉴别引物对,其特征在于,所述特异性鉴别引物对包含碱基序列如SEQ ID NO:1所示的正向引物以及碱基序列如SEQ ID NO:2所示的反向引物。A pair of specific identification primers for turtle shells and its decoction pieces, traditional Chinese medicine formula granules and other water extract products, characterized in that the pair of specific identification primers comprises a base sequence as shown in SEQ ID NO:1. Primer and base sequence are as the reverse primer shown in SEQ ID NO:2.
  2. 一种鳖甲及其饮片、中药配方颗粒和其他水提物制品的特异性鉴别试剂盒,其特征在于,所述试剂盒包含权利要求1所述的特异性鉴别引物对,以及扩增试剂。A specific identification kit for turtle shells and its decoction pieces, traditional Chinese medicine formula granules and other water extract products, characterized in that the kit includes the pair of specific identification primers as claimed in claim 1, and amplification reagents.
  3. 根据权利要求2所述的鳖甲及其饮片、中药配方颗粒和其他水提物制品的特异性鉴别试剂盒,其特征在于,所述扩增试剂包含扩增缓冲液、dNTP、DNA聚合酶和水;所述扩增缓冲液为10×PCR Buffer I,所述DNA聚合酶为Taq酶。The specific identification kit of turtle shell and its decoction pieces, traditional Chinese medicine formula granules and other water extract products according to claim 2, wherein the amplification reagent comprises amplification buffer, dNTP, DNA polymerase and water; the amplification buffer is 10×PCR Buffer I, and the DNA polymerase is Taq enzyme.
  4. 一种鳖甲、鳖甲饮片、鳖甲中药配方颗粒或其他鳖甲水提物制品的特异性鉴别方法,其特征在于,所述特异性鉴别方法包括如下步骤:A specific identification method for turtle shells, turtle shell decoction pieces, turtle shell traditional Chinese medicine formula granules or other turtle shell water extract products, characterized in that the specific identification method comprises the following steps:
    提取待测样品的DNA;和,extracting DNA from the sample to be tested; and,
    采用权利要求1所述的特异性鉴别引物对或者权利要求2或者3所述的特异性鉴别试剂盒对所述DNA进行扩增,分离所得扩增产物,根据所得分离产物对所述待测样品进行特异性鉴别。Use the specific identification primer pair described in claim 1 or the specific identification kit described in claim 2 or 3 to amplify the DNA, separate the resulting amplification product, and analyze the sample to be tested according to the obtained separation product. for specific identification.
  5. 根据权利要求4所述的鳖甲、鳖甲饮片、鳖甲中药配方颗粒或其他鳖甲水提物制品的特异性鉴别方法,其特征在于,根据所得分离产物对所述待测样品进行特异性鉴别包括:The specific identification method for turtle shells, turtle shell decoction pieces, turtle shell Chinese medicine formula granules or other turtle shell water extract products according to claim 4, characterized in that, according to the obtained separation product, the specificity of the sample to be tested is carried out Identification includes:
    若所述分离产物包含约236bp片段,则说明所述待测样品包含鳖甲;If the isolated product comprises a fragment of about 236bp, it means that the sample to be tested comprises turtle shells;
    若所述分离产物不包含约236bp片段,则说明所述待测样品包含鳖甲伪品或者不含鳖甲。If the isolated product does not contain a fragment of about 236bp, it means that the sample to be tested contains fake turtle shells or does not contain turtle shells.
  6. 根据权利要求4或者5所述的鳖甲、鳖甲饮片、鳖甲中药配方颗粒或其他鳖甲水提物制品的特异性鉴别方法,其特征在于,所述鳖甲伪品选自龟甲、角鳖甲、佛罗里达鳖甲和山瑞鳖甲中一种或者多种。According to the specific identification method of turtle shells, turtle shell decoction pieces, turtle shell Chinese medicine formula granules or other turtle shell water extract products according to claim 4 or 5, it is characterized in that, said turtle shell counterfeit products are selected from turtle shell, horned One or more of softshell turtles, softshell turtles and softshell turtles.
  7. 根据权利要求4至6中任一项所述的鳖甲、鳖甲饮片、鳖甲中药配方颗粒或其他鳖甲水提物制品的特异性鉴别方法,其特征在于,所述其他鳖甲水提物制品包含鳖甲中药标准汤剂。According to the specific identification method of turtle shells, turtle shell decoction pieces, turtle shell Chinese medicine formula granules or other turtle shell water extract products according to any one of claims 4 to 6, it is characterized in that said other turtle shell water extracts The product contains the standard decoction of Biejia traditional Chinese medicine.
  8. 根据权利要求4至7中任一项所述的鳖甲、鳖甲饮片、鳖甲中药配方颗粒或其他鳖甲水提物制品的特异性鉴别方法,其特征在于,扩增的退火温度为约59℃~61℃。According to the specific identification method of turtle shells, turtle shell decoction pieces, turtle shell Chinese medicine formula granules or other turtle shell water extract products according to any one of claims 4 to 7, it is characterized in that the annealing temperature of the amplification is about 59℃~61℃.
  9. 根据权利要求4至8中任一项所述的鳖甲、鳖甲饮片、鳖甲中药配方颗粒或其他鳖甲水提物制品的特异性鉴别方法,其特征在于,扩增的反应体系包含:约2.5μL含Mg2+的 10×PCR Buffer I、约2.5mmol/L dNTP、约10μmol/L正向引物、约10μmol/L反向引物、约5U/μL Taq酶、约30ng~50ng模板DNA和约19.2μL水。The specific identification method for turtle shells, turtle shell decoction pieces, turtle shell traditional Chinese medicine formula granules or other turtle shell water extract products according to any one of claims 4 to 8, characterized in that the amplified reaction system comprises: About 2.5 μL containing Mg 2+ 10×PCR Buffer I, about 2.5mmol/L dNTP, about 10μmol/L forward primer, about 10μmol/L reverse primer, about 5U/μL Taq enzyme, about 30ng~50ng template DNA and about 19.2μL water.
  10. 根据权利要求4至9中任一项所述的鳖甲、鳖甲饮片、鳖甲中药配方颗粒或其他鳖甲水提物制品的特异性鉴别方法,其特征在于,扩增的反应程序包括:约95℃预变性约5min;约95℃变性约30s,约60℃退火约30s,约72℃延伸约30s,共约33个循环;最后约72℃延伸5约min。 The method for specific identification of turtle shells, turtle shell decoction pieces, turtle shell Chinese medicine formula granules or other turtle shell water extract products according to any one of claims 4 to 9, wherein the amplification reaction procedure includes: Pre-denaturation at about 95°C for about 5 minutes; denaturation at about 95°C for about 30 seconds, annealing at about 60°C for about 30 seconds, extension at about 72°C for about 30 seconds, a total of about 33 cycles; and finally extension at about 72°C for about 5 minutes.
PCT/CN2023/072028 2022-01-14 2023-01-13 Specific identification primer pair for trionycis carapax and decoction pieces, traditional chinese medicine dispensing granules and other water extract products thereof, use of specific identification primer pair, and identification method WO2023134738A1 (en)

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