WO2023102859A1 - Method for acquiring active ingredient of anti-hematologic tumor drug and use thereof - Google Patents

Method for acquiring active ingredient of anti-hematologic tumor drug and use thereof Download PDF

Info

Publication number
WO2023102859A1
WO2023102859A1 PCT/CN2021/136908 CN2021136908W WO2023102859A1 WO 2023102859 A1 WO2023102859 A1 WO 2023102859A1 CN 2021136908 W CN2021136908 W CN 2021136908W WO 2023102859 A1 WO2023102859 A1 WO 2023102859A1
Authority
WO
WIPO (PCT)
Prior art keywords
mirna
cells
mirnas
mir
active ingredient
Prior art date
Application number
PCT/CN2021/136908
Other languages
French (fr)
Chinese (zh)
Inventor
隋梅花
陈宇
陆欢
李晨
吴昊
Original Assignee
浙江大学
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by 浙江大学 filed Critical 浙江大学
Priority to PCT/CN2021/136908 priority Critical patent/WO2023102859A1/en
Publication of WO2023102859A1 publication Critical patent/WO2023102859A1/en

Links

Images

Classifications

    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00Medicinal preparations containing organic active ingredients
    • A61K31/70Carbohydrates; Sugars; Derivatives thereof
    • A61K31/7088Compounds having three or more nucleosides or nucleotides
    • A61K31/711Natural deoxyribonucleic acids, i.e. containing only 2'-deoxyriboses attached to adenine, guanine, cytosine or thymine and having 3'-5' phosphodiester links
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P35/00Antineoplastic agents
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P7/00Drugs for disorders of the blood or the extracellular fluid
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/11DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
    • C12N15/113Non-coding nucleic acids modulating the expression of genes, e.g. antisense oligonucleotides; Antisense DNA or RNA; Triplex- forming oligonucleotides; Catalytic nucleic acids, e.g. ribozymes; Nucleic acids used in co-suppression or gene silencing

Abstract

Disclosed is a method for acquiring an active ingredient of a drug capable of treating/preventing hematologic tumors. The method comprises performing three-stage separation on extracellular vesicles, which are secreted by NK-92 cells and NK-92MI cells, to obtain two groups of extracellular vesicles with three sizes: a large size, a medium size and a small size; and then, activity screening is performed on a large sample consisting of miRNA sequences of NK-92 cells and NK-92MI cells and miRNA sequences of the two groups of extracellular vesicles to obtain active miRNA having a strong ability to kill hematologic tumor cells. The active miRNA participates in the regulation of gene expression, regulates the early development of immune cells, affects the development and differentiation of immune cells, and has an effect of treating/preventing hematologic tumors. Moreover, the transfection efficiency of the active miRNA in the liposome is high, and an anti-tumor effect obtained after transfection is obvious.

Description

抗血液肿瘤药物活性成分的获得方法及其用途Method for obtaining active ingredient of anti-hematological tumor drug and use thereof 技术领域technical field
本发明属于医药技术领域,涉及相关的活性成分在制备治疗/预防白血病药物上的用途。The invention belongs to the technical field of medicine and relates to the use of related active ingredients in the preparation of medicines for treating/preventing leukemia.
背景技术Background technique
血液系统恶性肿瘤(Hematological Malignant Tumors)是一种血液系统恶性疾病,具有高度恶性和分化障碍等特点,包括急、慢性白血病及淋巴瘤等。慢性粒细胞白血病(Chronic Myelocytic Leukemia,CML)是一种发生在多能造血干细胞上的恶性骨髓增殖性肿瘤。其特点是产生大量不成熟的白细胞,这些白细胞在骨髓内聚集,抑制骨髓正常造血功能,并能够通过血液在全身扩散,导致病人出现贫血、容易出血、感染及器官浸润等。目前白血病的治疗方法主要包括化疗、局部放疗、靶向治疗、中药治疗和骨髓移植等,然而存在药物治疗效果欠佳、骨髓移植费用昂贵、容易产生耐药及复发等棘手问题。因此,临床上亟需能够有效治疗/预防血液肿瘤/白血病的新型活性成分和新型药物。Hematological malignant tumors (Hematological Malignant Tumors) are malignant diseases of the blood system, which are characterized by high-grade malignancy and differentiation disorders, including acute and chronic leukemia and lymphoma. Chronic myelocytic leukemia (CML) is a malignant myeloproliferative neoplasm that occurs on pluripotent hematopoietic stem cells. It is characterized by the production of a large number of immature white blood cells, which accumulate in the bone marrow, inhibit the normal hematopoietic function of the bone marrow, and can spread throughout the body through the blood, resulting in anemia, easy bleeding, infection, and organ infiltration in patients. Currently, the treatment methods for leukemia mainly include chemotherapy, local radiotherapy, targeted therapy, traditional Chinese medicine therapy, and bone marrow transplantation. Therefore, there is an urgent need for new active ingredients and new drugs that can effectively treat/prevent hematological tumors/leukemia clinically.
自然杀伤细胞(Natural Killer cells,NK细胞)来源于骨髓淋巴样干细胞,主要分布于骨髓、外周血、肝、脾、肺和淋巴结等组织器官中。NK细胞不同于T细胞和B细胞,是一类无需预先致敏就能非特异性杀伤肿瘤细胞和病毒感染细胞的淋巴细胞。NK-92是生长、增殖依赖于IL-2的人源性NK细胞株,NK-92MI是源自NK-92细胞株、经基因转染得到的IL-2非依赖性NK细胞株。两株人源性NK细胞株可以方便和经济地实现稳定、大量、长期扩增,并已被证实对很多恶性肿瘤具有细胞毒性。细胞外囊泡(Extracellular Vesicles,EVs)是由细胞释放的各种具有膜结构的囊泡的统称。科学家们最早于1983年从绵羊网织红细胞中分离出携带亲本细胞成分的细胞外囊泡,其后细胞外囊泡陆续在血液、尿液、羊水、唾液等体液中被发现和报道。细胞外囊泡通常携带母细胞内的重要生物活性物质,例如蛋白质、mRNA、miRNA和脂质等,能够通过与靶细胞的结合而调控细胞功能,参与细胞间交流。Natural killer cells (Natural Killer cells, NK cells) are derived from bone marrow lymphoid stem cells and are mainly distributed in tissues and organs such as bone marrow, peripheral blood, liver, spleen, lung and lymph nodes. NK cells are different from T cells and B cells, and are a type of lymphocytes that can non-specifically kill tumor cells and virus-infected cells without prior sensitization. NK-92 is a human-derived NK cell line whose growth and proliferation depend on IL-2, and NK-92MI is an IL-2-independent NK cell line derived from NK-92 cell line and obtained through gene transfection. The two human-derived NK cell lines can achieve stable, large-scale, and long-term expansion conveniently and economically, and have been proven to be cytotoxic to many malignant tumors. Extracellular vesicles (EVs) are a general term for various vesicles with membrane structures released by cells. Scientists first isolated extracellular vesicles carrying parental cell components from sheep reticulocytes in 1983, and extracellular vesicles were subsequently discovered and reported in body fluids such as blood, urine, amniotic fluid, and saliva. Extracellular vesicles usually carry important biologically active substances in the mother cell, such as proteins, mRNA, miRNA, and lipids, which can regulate cell functions and participate in intercellular communication by binding to target cells.
本发明利用两种人源性NK细胞株NK-92和NK-92MI作为获取NK细胞分泌的细胞外囊泡的来源。The present invention utilizes two human NK cell strains NK-92 and NK-92MI as sources for obtaining extracellular vesicles secreted by NK cells.
发明内容Contents of the invention
鉴于上述背景技术,本发明的目的是提供一种活性成分的获得方法及其在制备治疗/预防白血病药物上的用途。In view of the above-mentioned background technology, the object of the present invention is to provide a method for obtaining the active ingredient and its use in the preparation of a medicine for treating/preventing leukemia.
经研究,本发明提供如下技术方案:一种用于制备抗血液肿瘤药物的活性成分的获得方法,包括:After research, the present invention provides the following technical solution: a method for obtaining active ingredients for preparing anti-hematological tumor drugs, comprising:
1)将以下8组miRNA进行差异表达分析,筛选出差异倍数显著或平均表达量高的miRNA;8组miRNA为:NK-92表达的miRNA、NK-92 MI表达的miRNA、NK-92细胞外囊泡LEV表达的miRNA、NK-92细胞外囊泡SEV表达的miRNA、NK-92细胞外囊泡EXO表达的miRNA、NK-92 MI细胞外囊泡LEV表达的miRNA、NK-92 MI细胞外囊泡SEV表达的miRNA、NK-92 MI细胞外囊泡EXO表达的miRNA。1) Analyze the differential expression of the following 8 groups of miRNAs, and screen out the miRNAs with significant multiples of difference or high average expression levels; the 8 groups of miRNAs are: miRNAs expressed by NK-92, miRNAs expressed by NK-92 MI, miRNA expressed in vesicle LEV, miRNA expressed in NK-92 extracellular vesicle SEV, miRNA expressed in NK-92 extracellular vesicle EXO, miRNA expressed in NK-92 MI extracellular vesicle LEV, NK-92 MI extracellular miRNA expressed by vesicle SEV, miRNA expressed by NK-92 MI extracellular vesicle EXO.
2)将步骤1筛选出的miRNA,基于差异倍数或平均表达量的高低进行排序,筛选出差异倍数高或平均表达量高的活性miR-X。2) The miRNAs screened in step 1 are sorted based on the difference multiple or average expression level, and the active miR-X with high difference multiple or high average expression level is screened out.
进一步地,本发明提供上述NK-92的细胞外囊泡LEV、SEV与EXO,以及NK-92MI的细胞外囊泡LEV、SEV与EXO的获得方法,具体为:Further, the present invention provides methods for obtaining the above-mentioned extracellular vesicles LEV, SEV and EXO of NK-92, and the extracellular vesicles LEV, SEV and EXO of NK-92MI, specifically:
(1)将NK-92或NK-92MI细胞培养24-48h后的培养液收集到50mL离心管中,在4℃条件下以离心力400g离心10min,去除死细胞,收集上层溶液;在4℃条件下以离心力2000g离心20min,进一步去除死细胞和细胞碎片,收集上清液。(1) Collect the culture medium of NK-92 or NK-92MI cells cultured for 24-48 hours into a 50mL centrifuge tube, and centrifuge at 400g for 10min at 4°C to remove dead cells and collect the upper solution; Centrifuge at a centrifugal force of 2000 g for 20 min to further remove dead cells and cell debris, and collect the supernatant.
(2)将第(1)步收集的上清液,在4℃条件下以离心力10000g离心30min,获得沉淀为LEV,并收集上清液。在含有沉淀的离心管中加入40mL磷酸盐缓冲液(PBS),清洗1-2遍(4℃,10000g离心30min),将获得的LEV存放于-80℃。(2) The supernatant collected in step (1) was centrifuged at 4° C. for 30 min at a centrifugal force of 10,000 g to obtain a precipitate as LEV, and the supernatant was collected. Add 40 mL of phosphate buffered saline (PBS) to the centrifuge tube containing the precipitate, wash 1-2 times (4°C, centrifuge at 10,000 g for 30 min), and store the obtained LEV at -80°C.
(3)将第(2)步得到的上清液转移至超离管中,在4℃条件下以离心力 110000g离心70min,沉淀为EXO,所得沉淀使用PBS在4℃条件下以离心力110000g离心70min进行清洗,将沉淀清洗1-2遍,最后用50μL PBS吹打混匀,将所获得的EXO存放于-80℃条件。(3) Transfer the supernatant obtained in step (2) to an ultracentrifuge tube, centrifuge at 110,000 g for 70 min at 4°C, and the precipitate is EXO. Use PBS to centrifuge at 110,000 g for 70 min at 4°C For washing, wash the precipitate 1-2 times, and finally mix it with 50 μL PBS, and store the obtained EXO at -80 °C.
(4)将第(3)步得到上清液在4℃条件下以离心力167200g离心16h,沉淀即为SEV,所得沉淀用PBS在4℃条件下以离心力167200g离心4h清洗,将沉淀清洗2-3遍,最后用50μL PBS吹打混匀,将获得的SEV存放于-80℃。(4) Centrifuge the supernatant obtained in step (3) with a centrifugal force of 167,200g for 16 hours at 4°C, and the precipitate is SEV. The obtained precipitate is washed with PBS at a centrifugal force of 167,200g for 4 hours at 4°C, and the precipitate is washed for 2- 3 times, finally mixed with 50 μL PBS, and stored the obtained SEV at -80 °C.
基于以上方法至少可以获得如下活性成分:Based on the above method at least the following active ingredients can be obtained:
(a)序列如SEQIDNO.1~SEQIDNO.6任一项所示的miR-X,或经修饰的miR-X衍生物;(a) miR-X whose sequence is shown in any one of SEQ ID NO.1 to SEQ ID NO.6, or a modified miR-X derivative;
SEQ ID NO.1(bta-miR-2478-L-2):ATCCCACTTCTGACACCA;SEQ ID NO.1(bta-miR-2478-L-2): ATCCCACTTCTGACACCA;
SEQ ID NO.2(hsa-miR-1260a):ATCCCACCTCTGCCACCA;SEQ ID NO.2(hsa-miR-1260a): ATCCCACCTCTGCCACCA;
SEQ ID NO.3(hsa-miR-197-3p):TTCACCACCTTCTCCACCCAGC;SEQ ID NO.3(hsa-miR-197-3p):TTCACCACCTTCTCCACCCAGC;
SEQ ID NO.4(hsa-miR-296-5p):AGGGCCCCCCCTCAATCCTGT;SEQ ID NO.4(hsa-miR-296-5p): AGGGCCCCCCCTCAATCCTGT;
SEQ ID NO.5(hsa-miR-339-5p):TCCCTGTCCTCCAGGAGCTCACG;SEQ ID NO.5(hsa-miR-339-5p): TCCCTGTCCTCCAGGAGCTCACG;
SEQ ID NO.6(hsa-miR-223-3p):TGTCAGTTTGTCAAATACCCCASEQ ID NO.6(hsa-miR-223-3p):TGTCAGTTTGTCAAATACCCCA
(b)前体miRNA,所述的前体miRNA能在宿主内加工成(a)中所述的miR-X;(b) precursor miRNA, which can be processed into miR-X described in (a) in the host;
(c)多核苷酸,所述的多核苷酸能被宿主转录形成(b)中所述的前体miRNA,并加工形成(a)中所述的微小RNA;(c) a polynucleotide, which can be transcribed by the host to form the precursor miRNA described in (b), and processed to form the microRNA described in (a);
(d)表达载体,所述表达载体含有(a)中所述的miR-X的微小RNA、或(b)中所述的前体miRNA、或(c)中所述的多核苷酸;(d) an expression vector, which contains the microRNA of miR-X described in (a), or the precursor miRNA described in (b), or the polynucleotide described in (c);
(e)所述(a)中所述的微小RNA的激动剂。(e) an agonist of the microRNA described in (a).
具体地,(e)中所述激动剂选自下组:促进miR-X表达的物质、提高miR-X活性的物质。Specifically, the agonist in (e) is selected from the group consisting of substances that promote the expression of miR-X and substances that increase the activity of miR-X.
本发明还提供上述一种活性成分的用途,所述的活性成分用于制备一药物,所述药物用于治疗/预防血液肿瘤。The present invention also provides the use of the above-mentioned active ingredient, the active ingredient is used for preparing a medicine, and the medicine is used for treating/preventing hematological tumors.
本发明还提供一种药物组合物,所述的药物组合物含有上述活性成分,和药学上可接受的载体。The present invention also provides a pharmaceutical composition, which contains the above active ingredients and a pharmaceutically acceptable carrier.
具体地,所述的药物组合物的制剂形式为冻干粉针、微针、注射剂、片剂、贴剂、胶囊、口服混悬液、或介入栓塞用微球。Specifically, the preparation form of the pharmaceutical composition is freeze-dried powder injection, microneedle, injection, tablet, patch, capsule, oral suspension, or microspheres for interventional embolization.
具体地,所述药物组合物的递送方法有:转载法、装载药物法、直接裸RNA注射法、脂质体包裹RNA直接注射法和纳米材料组装法等阳离子材料复合物递送,以及细菌携带质粒表达RNA法、病毒包装表达RNA法等递送方式。Specifically, the delivery methods of the pharmaceutical composition include: transshipment method, drug loading method, direct naked RNA injection method, liposome-encapsulated RNA direct injection method, nanomaterial assembly method and other cationic material complex delivery methods, and bacteria carrying plasmids Delivery methods such as expression RNA method, viral packaging expression RNA method, etc.
本发明的有益效果在于:本发明首次对NK-92细胞、NK-92MI细胞分泌的细胞外囊泡进行三级分离,获得两组包括大中小三种尺寸的细胞外囊泡,然后利用NK-92细胞、NK-92MI细胞的miRNA序列和两组细胞外囊泡的miRNA序列组成的大样本进行活性筛选,获得对血液肿瘤细胞杀伤力强的活性miRNA。通过本发明获得的活性miRNA可参与调节基因的表达,在治疗/预防血液肿瘤中具有一定的优势;这些活性miRNA可能调节免疫细胞的早期发育,影响免疫细胞发育及分化;活性miRNA可能参与免疫功能的调控,对血液肿瘤具有治疗/预防作用。本发明提出的活性miRNA在脂质体中的转染效率高,转染后的抗肿瘤效果显著。The beneficial effect of the present invention is that: the present invention for the first time performs tertiary separation on extracellular vesicles secreted by NK-92 cells and NK-92MI cells, and obtains two groups of extracellular vesicles including three sizes of large, medium and small, and then uses NK- The miRNA sequences of 92 cells and NK-92MI cells and the miRNA sequences of two groups of extracellular vesicles were screened for activity, and active miRNAs with strong lethality to hematological tumor cells were obtained. The active miRNAs obtained by the present invention can participate in the regulation of gene expression, and have certain advantages in the treatment/prevention of hematological tumors; these active miRNAs may regulate the early development of immune cells and affect the development and differentiation of immune cells; active miRNAs may participate in immune function The regulation of , has therapeutic/preventive effects on hematological malignancies. The active miRNA proposed by the invention has high transfection efficiency in the liposome, and the anti-tumor effect after transfection is remarkable.
附图说明Description of drawings
图1 NK-92和NK-92MI两种细胞株提取不同尺寸细胞外囊泡的流程图;Figure 1 Flowchart for the extraction of extracellular vesicles of different sizes from two cell lines, NK-92 and NK-92MI;
图2.NK-92和NK-92MI细胞株分泌的不同尺寸细胞外囊泡的电镜图;Figure 2. Electron micrographs of extracellular vesicles of different sizes secreted by NK-92 and NK-92MI cell lines;
图3.NK-92和NK-92MI细胞株分泌的不同尺寸细胞外囊泡的粒径图;Figure 3. The particle size diagram of extracellular vesicles of different sizes secreted by NK-92 and NK-92MI cell lines;
图4.NK-92和NK-92MI细胞株的抗血液肿瘤效果图;Figure 4. Anti-hematological tumor effects of NK-92 and NK-92MI cell lines;
图5.NK-92和NK-92MI细胞株的miRNA生信分析图;Figure 5. miRNA bioinformatics analysis chart of NK-92 and NK-92MI cell lines;
图6 NK-92和NK-92MI细胞株分别分泌的不同尺寸细胞外囊泡抗血液肿瘤效果图;Fig. 6 Anti-hematological tumor effects of extracellular vesicles of different sizes secreted by NK-92 and NK-92MI cell lines;
图7 NK-92和NK-92MI细胞株分别分泌的不同尺寸细胞外囊泡miRNA生信分析图;Figure 7 Bioinformatics analysis of extracellular vesicles with different sizes secreted by NK-92 and NK-92MI cell lines;
图8活性miRNA-X mimics(模拟物)及miRNA-X inhibitors(抑制剂)转染效果图;Figure 8 active miRNA-X mimics (mimic) and miRNA-X inhibitors (inhibitor) transfection effect diagram;
图9活性miRNA-X的mimics(模拟物)及miRNA-X inhibitors(抑制剂) 转染后抗血液肿瘤的效果图。Fig. 9 Effect diagram of anti-hematological tumor after transfection of active miRNA-X mimics (mimics) and miRNA-X inhibitors (inhibitors).
具体实施方式Detailed ways
下面将结合附图对本发明的优选实施例进行详细的描述。优选实施例中未注明具体条件的实验方法,通常按照常规条件,或按照试剂制造厂商所建议的条件进行。Preferred embodiments of the present invention will be described in detail below with reference to the accompanying drawings. The experimental methods for which specific conditions are not indicated in the preferred embodiments are usually carried out according to conventional conditions, or according to the conditions suggested by the reagent manufacturer.
实施例1.活性miRNA-X筛选Example 1. Active miRNA-X screening
本实施例中,使用的细胞株均为人源性细胞株,全部购自中国科学院典型培养物保藏委员会细胞库(National Collection of Authenticated Cell Cultures,国家模式与特色实验细胞资源库)。In this example, the cell lines used are all human-derived cell lines, all of which were purchased from the National Collection of Authenticated Cell Cultures (National Collection of Authenticated Cell Cultures, National Model and Characteristic Experimental Cell Resource Bank).
人免疫细胞株NK-92所使用的培养液成分为:添加12.5%马血清(Gibco,CA,USA)和12.5%胎牛血清(Gibco,CA,USA)的MEM-α(Hyclone,UT,USA),以及0.2mM肌醇(Sigma,DA,DE),0.1mMβ巯基乙醇(Sigma,DA,DE),0.02mM叶酸(Sigma,DA,DE)和200U/mL重组IL-2(Novoprotein,SHH,CN)。The culture medium composition used by the human immune cell line NK-92 is: MEM-α (Hyclone, UT, USA) supplemented with 12.5% horse serum (Gibco, CA, USA) and 12.5% fetal bovine serum (Gibco, CA, USA) ), and 0.2mM inositol (Sigma, DA, DE), 0.1mM β-mercaptoethanol (Sigma, DA, DE), 0.02mM folic acid (Sigma, DA, DE) and 200U/mL recombinant IL-2 (Novoprotein, SHH, CN).
人免疫细胞株NK-92MI的培养液成分与上述NK-92细胞株的培养液成分相似,但不含重组IL-2。The composition of the culture solution of the human immune cell line NK-92MI is similar to that of the above-mentioned NK-92 cell line, but does not contain recombinant IL-2.
人白血病细胞株K562在含有10%正常胎牛血清和1%青霉素-链霉素(Yeasen,SHH,CN)的RPMI-1640培养基(Gibco,CA,USA)中培养。Human leukemia cell line K562 was cultured in RPMI-1640 medium (Gibco, CA, USA) containing 10% normal fetal bovine serum and 1% penicillin-streptomycin (Yeasen, SHH, CN).
所有细胞株在保持37℃、含有5%CO 2及湿润环境的细胞培养箱(Thermo Fisher Scientific,MA,USA)中进行培养。 All cell lines were cultured in a cell culture incubator (Thermo Fisher Scientific, MA, USA) maintained at 37°C, containing 5% CO 2 and a humid environment.
1.1细胞外囊泡(EVs)的分离、获取及纯化1.1 Isolation, acquisition and purification of extracellular vesicles (EVs)
无外泌体的培养液制备:将血清(含有1:1混合的马血清和胎牛血清)与MEM-α培养液按1:4体积比混合后,平均分装到超速离心管(规格:25×89mm)中并配平,将超速离心管放入超速离心机中在4℃条件下以离心力120000g离心16h(超离转子:SW32 Ti,Beckman,CA,USA),离心结束后收集到的上清液即为无外泌体的培养液。Preparation of exosome-free culture medium: After mixing serum (containing 1:1 mixed horse serum and fetal bovine serum) and MEM-α culture medium at a volume ratio of 1:4, evenly distribute them into ultracentrifuge tubes (specifications: 25×89mm) and leveled, put the ultracentrifuge tube into an ultracentrifuge and centrifuge at 120,000g for 16h at 4°C (ultracentrifuge rotor: SW32 Ti, Beckman, CA, USA), and the supernatant collected after centrifugation The supernatant is the culture medium without exosomes.
NK-92和NK-92MI细胞株分别在上述无外泌体的培养液(无EVs的培养液)中培养2-3天,随后分别进行下述三部分实验操作,以分别获取细胞外囊泡LEV(Large Extracellular Vesicle)、细胞外囊泡EXO(Exosome)及细胞外囊泡SEV(Small Extracellular Vesicle)。NK-92 and NK-92MI cell lines were cultured in the above-mentioned exosome-free culture medium (EVs-free culture medium) for 2-3 days, and then the following three experimental operations were performed to obtain extracellular vesicles respectively LEV (Large Extracellular Vesicle), EXO (Exosome) and SEV (Small Extracellular Vesicle).
1.1.1细胞外囊泡LEV的分离与获取:①分别收集两株细胞培养2-3天后的培养液,在4℃条件下以离心力400g离心10min,收集上清液;②将上清液在4℃条件下以离心力2000g离心20min,弃去底部的沉淀(沉淀为细胞和碎片),收集上清液;③将获得的上清液在4℃条件下以离心力10000g离心30min,然后将离心获得的沉淀用磷酸盐缓冲液(PBS)在4℃条件下以离心力10000g离心30min以洗涤沉淀,最后获得的沉淀分别为来源于两株免疫细胞株的LEV,即NK-92 LEV和NK-92MI LEV(如图2A,D;图3A,D);④分别用50-100μL PBS轻轻吹打、溶解和混匀LEV沉淀,并存放于-80℃。1.1.1 Isolation and acquisition of extracellular vesicles LEV: ①Collect the culture fluid of the two cell lines after 2-3 days of culture, centrifuge at 4°C for 10min with a centrifugal force of 400g, and collect the supernatant; ②Put the supernatant in Centrifuge at a centrifugal force of 2000g for 20min at 4°C, discard the precipitate at the bottom (the precipitate is cells and debris), and collect the supernatant; ③Centrifuge the obtained supernatant at 10000g for 30min at 4°C, and then centrifuge to obtain The precipitates were washed with phosphate buffered saline (PBS) at 4°C with a centrifugal force of 10,000g for 30 min to wash the precipitates. The final precipitates were LEVs derived from two immune cell lines, namely NK-92 LEV and NK-92MI LEV (Figure 2A, D; Figure 3A, D); ④ Use 50-100 μL PBS to gently pipette, dissolve and mix the LEV precipitate, and store at -80 °C.
1.1.2细胞外囊泡EXO的分离与获取:①将1.1.1.实验操作③中以在4℃条件下离心力10000g离心30min后得到的上清液用直径为0.22μm的无菌过滤器进行过滤,分别收集过滤后的液体;②在4℃条件下以离心力110000g将过滤后收集的液体分别离心70min(超离转子:SW32 Ti),分别收集获得的沉淀;③将获得的沉淀分别用PBS重新洗涤悬浮,在4℃条件下以离心力110000g离心和洗涤70min,并重复该PBS重悬及洗涤的实验操作1-2次,最终获得沉淀为来源于两株免疫细胞株的EXO,即NK-92 EXO和NK-92MI EXO(如图2B,E;图3B,E);④分别用50-100μL PBS轻轻吹打、溶解和混匀EXO沉淀,并存放于-80℃。1.1.2 Isolation and acquisition of extracellular vesicles EXO: ①Use a sterile filter with a diameter of 0.22 μm to centrifuge the supernatant obtained in 1.1.1. Filter and collect the filtered liquid separately; ② Centrifuge the collected liquid after filtration at 4°C with a centrifugal force of 110,000g for 70min (ultra-centrifugal rotor: SW32 Ti), and collect the precipitate obtained separately; ③ Wash the obtained precipitate with PBS Re-wash the suspension, centrifuge and wash with a centrifugal force of 110,000g at 4°C for 70 minutes, and repeat the experimental operation of PBS resuspension and washing 1-2 times, and finally obtain the precipitate as EXO derived from two immune cell lines, namely NK- 92 EXO and NK-92MI EXO (as shown in Figure 2B, E; Figure 3B, E); ④ Gently pipette, dissolve and mix the EXO precipitate with 50-100 μL PBS respectively, and store at -80 °C.
1.1.3细胞外囊泡SEV的分离与获取:①将1.1.2.实验操作①过滤后收集的液体在4℃条件下以离心力110000g离心70min,在1.1.2.实验操作②收集沉淀用于分离和获得细胞外囊泡EXO的同时,分别收集上清液;②将获得的上清液分别在4℃条件下以167000g的转速离心16h,分别收集获得的沉淀;③将获得的沉淀分别用PBS重新洗涤悬浮,在4℃条件下以离心力167000g离心和洗涤4h,并重复该PBS重悬及洗涤的实验操作2-3次,最终获得沉淀为来源 于两株免疫细胞株的SEV,即NK-92 SEV和NK-92MI SEV(如图2C,F;图3C,F);④分别用50-100μL PBS轻轻吹打、溶解和混匀EXO沉淀,并存放于-80℃。1.1.3 Separation and acquisition of extracellular vesicles SEV: ① Centrifuge the liquid collected after filtration in 1.1.2. Experimental operation ① at 4°C with a centrifugal force of 110,000g for 70min, and collect the precipitate in 1.1.2. Experimental operation ② for While separating and obtaining extracellular vesicles EXO, the supernatants were collected separately; ②The obtained supernatants were centrifuged at 167000g for 16 hours at 4°C, and the obtained precipitates were collected; ③The obtained precipitates were respectively used Re-wash the suspension with PBS, centrifuge and wash at 4°C with a centrifugal force of 167,000g for 4 hours, and repeat the experimental operation of PBS re-suspension and washing for 2-3 times, and finally obtain the precipitate as SEV derived from two immune cell lines, namely NK -92 SEV and NK-92MI SEV (as shown in Figure 2C, F; Figure 3C, F); ④ Gently pipette, dissolve and mix the EXO precipitate with 50-100 μL PBS, respectively, and store at -80 °C.
上述不同类型细胞外囊泡分离、获取的流程汇总如图1所示,所得到的细胞外囊泡的透射电镜及粒径表征分别如图2、图3所示。The process summary of the separation and acquisition of the above different types of extracellular vesicles is shown in Figure 1, and the transmission electron microscope and particle size characterization of the obtained extracellular vesicles are shown in Figure 2 and Figure 3, respectively.
采用上述实验方法分离并获得两组、共6种细胞外囊泡后,进一步通过下列实验流程去除囊泡表面吸附的RNA:将获得的各种EVs分别用PBS重悬,加入适量的RNA酶(RNase A,Ambion,TX,USA),使RNase A最终浓度为1U/mL,随后将含有RNase A的各种细胞外囊泡溶液在37℃水浴锅(JingHong,SHH,CN)中孵育20min。本实验步骤遵循国际细胞外囊泡协会(International Society for Extracellular Vesicles,ISEV)的指南规范操作。After the above-mentioned experimental method was used to separate and obtain two groups of extracellular vesicles, a total of 6 kinds of extracellular vesicles, the RNA adsorbed on the vesicle surface was further removed by the following experimental procedure: the obtained EVs were resuspended in PBS, and an appropriate amount of RNase ( RNase A, Ambion, TX, USA), so that the final concentration of RNase A was 1U/mL, and then various extracellular vesicle solutions containing RNase A were incubated in a 37°C water bath (JingHong, SHH, CN) for 20min. The experimental steps follow the guidelines of the International Society for Extracellular Vesicles (ISEV).
1.2人源细胞株NK-92和NK-92MI及其分泌的细胞外囊泡的miRNA测序及生物信息学分析1.2 miRNA sequencing and bioinformatics analysis of human cell lines NK-92 and NK-92MI and their secreted extracellular vesicles
1.2.1 NK-92和NK-92MI细胞株的miRNA测序1.2.1 miRNA sequencing of NK-92 and NK-92MI cell lines
我们用总RNA纯化试剂盒(Norgen Biotek Corp,Thorold,ON,Canada)分别提取NK-92和NK-92MI培养细胞样本的总RNA(包括所有miRNA和小分子RNA);使用Bioanalyzer 2100(Agilent,CA,USA)分析获得的RNA的质量和数量,并确保RIN值>7.0;分别从两种细胞株提取的RNA样本中取1μg总RNA,使用TruSeq小分子RNA样品制备试剂盒(Illumina,SD,USA)制备小分子RNA文库;按照Illumina HiSeq 2500(Hanyu,SHH,China)的制造商提供的操作说明,委托联川生物有限公司(LC Sciences,HZ,CN)对上述两种细胞株样本中的miRNA分别进行50bp单端测序。We used Total RNA Purification Kit (Norgen Biotek Corp, Thorold, ON, Canada) to extract total RNA (including all miRNA and small molecule RNA) of NK-92 and NK-92MI cultured cell samples; Bioanalyzer 2100 (Agilent, CA , USA) to analyze the quality and quantity of the obtained RNA, and ensure the RIN value>7.0; respectively take 1 μg total RNA from the RNA samples extracted from the two cell lines, and use the TruSeq small molecule RNA sample preparation kit (Illumina, SD, USA ) to prepare a small molecule RNA library; according to the instructions provided by the manufacturer of Illumina HiSeq 2500 (Hanyu, SHH, China), entrusted Lianchuan Biological Co., Ltd. (LC Sciences, HZ, CN) to analyze the miRNAs in the above two cell line samples 50bp single-end sequencing was carried out respectively.
1.2.2两组细胞外囊泡的miRNA测序1.2.2 miRNA sequencing of two sets of extracellular vesicles
为了去除1.1中添加的RNA酶,并同步纯化细胞外囊泡,我们按照1.1中获取和纯化相应细胞外囊泡的步骤重新进行超离和洗涤;采用与1.2.1中相同的方法提取各种细胞外囊泡的总RNA、制备小分子RNA文库,并对各种细胞外囊泡样本中的miRNA分别进行50bp单端测序。In order to remove the RNase added in 1.1 and simultaneously purify the extracellular vesicles, we followed the steps of obtaining and purifying the corresponding extracellular vesicles in 1.1 to perform ultracentrifugation and washing again; the same method as in 1.2.1 was used to extract various Total RNA of extracellular vesicles, preparation of small molecule RNA libraries, and 50bp single-end sequencing of miRNAs in various extracellular vesicle samples.
1.2.3 miRNA测序结果的生物信息学分析1.2.3 Bioinformatics analysis of miRNA sequencing results
首先,使用ACGT101-miR分析软件(LC Sciences,TX,USA)对人源细胞株及其分泌的细胞外囊泡的miRNA测序数据进行生物信息学分析。该软件的主要分析流程如下:原始数据经过质控处理后得到clean reads,将clean reads去除3’接头并进行长度筛选,保留碱基长度在18-26nt的序列;其后将剩余序列与RNA数据库序列进行比对,如mRNA数据库、RFam数据库(包含rRNA,tRNA,snRNA,snoRNA等)及Repbase数据库(重复序列数据库),并进行过滤。First, using ACGT101-miR analysis software (LC Sciences, TX, USA) to perform bioinformatics analysis on the miRNA sequencing data of human cell lines and their secreted extracellular vesicles. The main analysis process of the software is as follows: clean reads are obtained after quality control treatment of the original data, the 3' linker is removed from the clean reads and length screening is performed, and sequences with a base length of 18-26 nt are retained; then the remaining sequences are compared with the RNA database Sequences are compared, such as mRNA database, RFam database (including rRNA, tRNA, snRNA, snoRNA, etc.) and Repbase database (repeated sequence database), and filtered.
其次,基于测序数据及生物信息学分析软件,对具有潜在重要生物学功能的miRNA进行筛选。主要筛选方法及流程:①基于DESeq2(V 1.26.0)(R语言软件包),对两种细胞株的miRNA测序结果,以及两组细胞外囊泡的miRNA测序结果进行差异表达分析,将其中符合log 2Fold Change>1.25及统计分析p值<0.05的miRNA作为差异表达miRNA并进行聚类分析,从两种细胞株的测序数据中筛选出15条表达量高且差异显著(NK92相比NK92-MI显著下调)的miRNA(图5及表1),同时从细胞外囊泡的测序数据中筛选出50条(图7及表2)共同表达量高的miRNA;②基于具有功能的miRNA应该在表达水平上具有优势的假设,对细胞株及细胞外囊泡的miRNA的平均表达量分别进行计算,并基于平均表达量的高低对上述差异表达miRNA进行排序;③根据①筛选出的miRNA的表达量及变化倍数,最终从上述15条细胞株中初步筛选获得的miRNA中遴选出在NK-92MI中表达显著高于NK-92的4条目标miRNA(我们率先通过实验研究发现NK-92MI细胞株的抗血液肿瘤效果优于NK-92细胞株,结果如图4,用GraphPad Prism软件One-way ANOVA进行分析; *,P<0.05),包括1条未知的miRNA(bta-miR-2478_L-2)(差异倍数最明显)和3条已知的miRNA(hsa-miR-1260a,hsa-miR-197-3p,hsa-miR-296-5p)(图5)。同时,从上述50条细胞外囊泡miRNA中初步筛选获得的miRNA中遴选出在EXO中表达显著高于LEV和SEV的2条目标miRNA(我们率先通过实验研究发现EXO抗血液肿瘤效果显著优于LEV和SEV,结果如 图6,用GraphPad Prism软件One-way ANOVA进行分析; *,P<0.05, **,P<0.01, ***,P<0.001),包括已知的hsa-miR-339-5p和hsa-miR-223-3p(图7)。 Secondly, based on the sequencing data and bioinformatics analysis software, miRNAs with potentially important biological functions were screened. Main screening methods and procedures: ①Based on DESeq2 (V 1.26.0) (R language software package), the differential expression analysis was performed on the miRNA sequencing results of the two cell lines and the miRNA sequencing results of the extracellular vesicles of the two groups, and the The miRNAs with log 2 Fold Change>1.25 and statistical analysis p-value<0.05 were regarded as differentially expressed miRNAs and clustered, and 15 high-expression and significant differences were screened out from the sequencing data of the two cell lines (NK92 compared with NK92 -MI was significantly down-regulated) miRNAs (Figure 5 and Table 1), and 50 miRNAs with high co-expression levels (Figure 7 and Table 2) were screened out from the sequencing data of extracellular vesicles; ②Based on the functional miRNAs should Assuming that there is an advantage in the expression level, the average expression levels of miRNAs in cell lines and extracellular vesicles are calculated separately, and the above-mentioned differentially expressed miRNAs are sorted based on the average expression levels; Finally, 4 target miRNAs whose expression in NK-92MI was significantly higher than that of NK-92 were selected from the miRNAs obtained from the preliminary screening of the above 15 cell lines (we first found that NK-92MI cells The anti-hematological tumor effect of the strain is better than that of the NK-92 cell line, the results are shown in Figure 4, analyzed with GraphPad Prism software One-way ANOVA; * , P<0.05), including 1 unknown miRNA (bta-miR-2478_L- 2) (the most obvious fold difference) and 3 known miRNAs (hsa-miR-1260a, hsa-miR-197-3p, hsa-miR-296-5p) (Figure 5). At the same time, 2 target miRNAs whose expression in EXO was significantly higher than that of LEV and SEV were selected from the miRNAs obtained from the preliminary screening of the above 50 extracellular vesicle miRNAs (we first found through experimental research that EXO's anti-blood tumor effect was significantly better than that of LEV and SEV, the results shown in Figure 6, were analyzed with GraphPad Prism software One-way ANOVA; * , P<0.05, ** , P<0.01, *** , P<0.001), including the known hsa-miR- 339-5p and hsa-miR-223-3p (Figure 7).
以上6条目标miRNA即为本申请所述的活性miRNA,标识为miRNA-X。The above 6 target miRNAs are the active miRNAs described in this application, and are marked as miRNA-X.
表1 NK-92/NK-92MI两细胞株之间表达水平变化显著的前15条miRNA测序结果Table 1 Sequencing results of the first 15 miRNAs whose expression levels changed significantly between NK-92/NK-92MI two cell lines
Figure PCTCN2021136908-appb-000001
Figure PCTCN2021136908-appb-000001
表2 NK-92/NK-92MI中EVs共同表达量高的50条miRNA测序结果Table 2 Sequencing results of 50 miRNAs with high EVs co-expression in NK-92/NK-92MI
Figure PCTCN2021136908-appb-000002
Figure PCTCN2021136908-appb-000002
Figure PCTCN2021136908-appb-000003
Figure PCTCN2021136908-appb-000003
Figure PCTCN2021136908-appb-000004
Figure PCTCN2021136908-appb-000004
实施例2.活性miRNA-X表达载体构建Example 2. Active miRNA-X expression vector construction
我们将上述miRNA-X在Lipofectamine 3000脂质体内进行表达。We expressed the above miRNA-X in Lipofectamine 3000 liposomes.
首先,miRNA mimic起始量为5nmol,加入250μL的RNA-free水稀释成20μM的贮存液,分装成5管,-20℃保存。First, the initial amount of miRNA mimic is 5 nmol, add 250 μL of RNA-free water to dilute to a 20 μM stock solution, divide into 5 tubes, and store at -20°C.
其次,miRNA mimic和mimic对照的实验浓度设为50nM,并操作如下:Secondly, the experimental concentration of miRNA mimic and mimic control is set to 50nM, and the operation is as follows:
①取5μL miRNA-X mimic和mimic对照分别加入到95μL opti-MEM中;① Add 5 μL miRNA-X mimic and mimic control to 95 μL opti-MEM respectively;
②取3μL Lipofectamine 3000加入到97μL opti-MEM中,加完后静置5min。② Add 3 μL Lipofectamine 3000 to 97 μL opti-MEM, and let stand for 5 minutes after the addition.
最后,将①加入到②中,轻轻吹打后静置15min,得到表达miRNA-X的Lipofectamine 3000脂质体。Finally, add ① to ②, gently pipette and let stand for 15 minutes to obtain Lipofectamine 3000 liposomes expressing miRNA-X.
上述构建获得的miRNA-X表达载体,事实上是miRNA应用的代表性剂型,为后续制备各种基于活性miRNA-X的药物提供一种思路。后续可制备含有上述活性miRNA-X及其激活剂/抑制剂的脂质体药物,给药方式为外敷或注射。The miRNA-X expression vector constructed above is actually a representative dosage form for miRNA application, which provides a way of thinking for the subsequent preparation of various drugs based on active miRNA-X. Subsequently, liposome drugs containing the above-mentioned active miRNA-X and its activator/inhibitor can be prepared, and the administration method is external application or injection.
实施例3.活性miRNA-X转染效率测试Example 3. Active miRNA-X transfection efficiency test
为验证实施例1筛选的6种miRNA-X在血液肿瘤细胞中的转染效率,我们进行了体外转染实验。首先,选用实施例1筛选出的6个活性miRNA-X相同的miRNA-X mimics(Ribo Life Science,JS,CN)与人白血病细胞株K562共孵育,具体实验步骤为:In order to verify the transfection efficiency of the six miRNA-Xs screened in Example 1 in hematological tumor cells, we conducted an in vitro transfection experiment. First, the miRNA-X mimics (Ribo Life Science, JS, CN) identical to the 6 active miRNA-Xs screened in Example 1 were used to co-incubate with the human leukemia cell line K562, and the specific experimental steps were as follows:
①接种K562细胞:将处于对数生长期的K562细胞按1×10 5~5×10 5个/孔接种到6孔板中。 ① Inoculation of K562 cells: inoculate 1×10 5 -5×10 5 cells/well of K562 cells in the logarithmic growth phase into 6-well plates.
②将实施例2构建获得的表达miRNA-X的Lipofectamine 3000脂质体加入到K562细胞中。② Add the Lipofectamine 3000 liposome expressing miRNA-X obtained in Example 2 into K562 cells.
③转染12h后换液,继续培养48h后收集K562细胞,利用RT-PCR实验检测转染效率。③ Change the medium 12 hours after transfection, collect K562 cells after continuing to culture for 48 hours, and use RT-PCR to detect the transfection efficiency.
通过RT-PCR实验检测K562白血病细胞内活性miRNA-X的表达水平,我们证实转染miRNA-X mimics后,6种miRNA-X的表达水平都显著上升(图8)。The expression levels of active miRNA-X in K562 leukemia cells were detected by RT-PCR experiments, and we confirmed that after transfection of miRNA-X mimics, the expression levels of six miRNA-Xs were significantly increased (Figure 8).
为进一步验证实施例1筛选的6种miRNA-X的抑制剂的转染效率,我们将相应的6种miRNA-X inhibitors(Ribo Life Science,JS,CN)与人白血病细胞株K562共孵育,具体实验步骤为:将处于对数生长期的K562细胞按1×10 5~5×10 5个/孔接种到6孔板中;miRNA-X inhibitors起始量为5nmol,加 入250μL的RNA-free水稀释成20μM的贮存液,分装成5管,-20℃保存。设定miRNA-X inhibitor和inhibitor对照的浓度为100nM,具体操作如下:①取10μL miRNA-X inhibitor和inhibitor对照,分别加入到90μL opti-MEM中;②取6μL Lipofectamine 3000加入到94μL opti-MEM中,加完后静置5min。随后将①加入到②中,轻轻吹打后静置15min,然后加入到K562细胞中。转染12h后换液,继续培养48h后收集K562细胞,利用RT-PCR实验检测转染效率。 In order to further verify the transfection efficiency of the 6 miRNA-X inhibitors screened in Example 1, we co-incubated the corresponding 6 miRNA-X inhibitors (Ribo Life Science, JS, CN) with the human leukemia cell line K562, specifically The experimental steps are as follows: K562 cells in the logarithmic growth phase are inoculated into 6-well plates at 1×10 5 to 5×10 5 cells/well; the initial amount of miRNA-X inhibitors is 5 nmol, and 250 μL of RNA-free water is added Diluted to 20 μM stock solution, divided into 5 tubes, and stored at -20°C. Set the concentration of miRNA-X inhibitor and inhibitor control to 100nM, and the specific operation is as follows: ①Take 10μL of miRNA-X inhibitor and inhibitor control, and add them to 90μL opti-MEM; ②Take 6μL Lipofectamine 3000 and add them to 94μL opti-MEM , after adding, let stand for 5min. Then add ① to ②, gently pipet and let stand for 15 minutes, and then add to K562 cells. The medium was changed 12 hours after transfection, and the K562 cells were collected after continuing to culture for 48 hours, and the transfection efficiency was detected by RT-PCR experiment.
通过RT-PCR实验检测K562白血病细胞内活性miRNA-X的表达水平,我们证实转染miRNA-X inhibitor后,6种miRNA-X的表达水平都显著下降(图8)。The expression levels of active miRNA-X in K562 leukemia cells were detected by RT-PCR experiments, and we confirmed that after transfection with miRNA-X inhibitor, the expression levels of six miRNA-Xs were significantly decreased (Figure 8).
由上述miRNA-X mimics和inhibitors转染实验可知:我们筛选获得的miRNA-X借助上述方法构建的携载体系成功转染到血液肿瘤细胞中,并在肿瘤细胞中分别对miRNA-X的表达产生符合预期、理想的调节效应。From the above miRNA-X mimics and inhibitors transfection experiments, it can be known that the miRNA-X obtained by our screening was successfully transfected into hematological tumor cells with the help of the carrier system constructed by the above method, and the expression of miRNA-X in the tumor cells was respectively produced. In line with expectations, the ideal moderating effect.
实施例4.活性miRNA-X的抗血液肿瘤活性测试Example 4. Anti-hematological tumor activity test of active miRNA-X
为了进一步验证miRNA-X具有抗血液肿瘤的作用,我们将活性miRNA-X mimics/inhibitors与K562人白血病细胞株共孵育。具体实验步骤为:In order to further verify that miRNA-X has anti-hematological tumor effects, we co-incubated active miRNA-X mimics/inhibitors with K562 human leukemia cell line. The specific experimental steps are:
将miRNA-X mimics/inhibitors转染至K562人白血病细胞中,转染步骤如实施例3中所述;转染12h后给转染体系换液,继续培养48h后加入3-(4,5-二甲基噻唑-2)-2,5-二苯基四氮唑溴盐(简称MTT,Sigma,DA,DE)以检测K562细胞的存活率,用于评价miRNA-X mimics/inhibitors对K562细胞的抗肿瘤效果。The miRNA-X mimics/inhibitors were transfected into K562 human leukemia cells, the transfection steps were as described in Example 3; after 12 hours of transfection, the medium of the transfection system was changed, and 3-(4,5- Dimethylthiazole-2)-2,5-diphenyltetrazolium bromide (abbreviated as MTT, Sigma, DA, DE) to detect the survival rate of K562 cells and to evaluate the effect of miRNA-X mimics/inhibitors on K562 cells antitumor effect.
实验结果表明6种miRNA-X mimics对K562白血病肿瘤细胞都起到了显著的抑制肿瘤增殖的作用,而miRNA-X inhibitors没有抑制K562肿瘤细胞增殖的作用(图9,用GraphPad Prism软件One-way ANOVA进行分析。 **,P<0.01; ***,P<0.001。)。 The experimental results show that the six miRNA-X mimics have significantly inhibited the proliferation of K562 leukemia tumor cells, while the miRNA-X inhibitors have no effect on the proliferation of K562 tumor cells (Figure 9, using GraphPad Prism software One-way ANOVA analyzed. ** , P<0.01; *** , P<0.001.).
由此可知,过表达6种miRNA-X中的任意一种均能够显著抑制血液肿瘤 细胞的增殖和发挥抗血液肿瘤的作用。本领域技术人员可以预见,基于6种miRNA-X开发的活性成分亦能够显著抑制血液肿瘤细胞的增殖和发挥抗血液肿瘤的作用,包括但不限于:①对miR-X进行修饰的miR-X衍生物;②能在宿主内加工成前述6种miR-X的前体miRNA;③能被宿主转录形成②中所述的前体miRNA的多核苷酸;④含有miR-X或①中所述miR-X衍生物的表达载体、或②中所述前体miRNA的表达载体、或③中所述的多核苷酸的表达载体(如实施例2);⑤促进miR-X表达和/或提高miR-X活性的激动剂。It can be seen that overexpressing any one of the six miRNA-Xs can significantly inhibit the proliferation of hematological tumor cells and play an anti-hematologic tumor effect. Those skilled in the art can foresee that the active ingredients developed based on the six miRNA-X can also significantly inhibit the proliferation of hematological tumor cells and play an anti-hematologic tumor effect, including but not limited to: ①miR-X modified by miR-X Derivatives; ② can be processed into the precursor miRNA of the aforementioned 6 miR-X in the host; ③ can be transcribed by the host to form the polynucleotide of the precursor miRNA described in ②; ④ contain miR-X or described in ① The expression vector of miR-X derivatives, or the expression vector of the precursor miRNA described in ②, or the expression vector of the polynucleotide described in ③ (as in Example 2); ⑤ Promote miR-X expression and/or increase Agonist of miR-X activity.
最后说明的是,以上优选实施例仅用以说明本发明的技术方案而非限制,尽管通过上述优选实施例已经对本发明进行了详细的描述,但本领域技术人员应当理解,可以在形式上和细节上对其作出各种各样的改变,而不偏离本发明权利要求书所限定的范围。Finally, it should be noted that the above preferred embodiments are only used to illustrate the technical solutions of the present invention and not to limit them. Although the present invention has been described in detail through the above preferred embodiments, those skilled in the art should understand that it can be described in terms of form and Various changes may be made in the details without departing from the scope of the invention defined by the claims.

Claims (8)

  1. 一种用于治疗/预防血液肿瘤药物的活性成分的获得方法,其特征在于,包括:A method for obtaining an active ingredient of a drug for treating/preventing hematological tumors, characterized by comprising:
    1)将以下8组miRNA进行差异表达分析,筛选出表达量高且差异显著的miRNA;8组miRNA为:NK-92细胞表达的miRNA、NK-92 MI细胞表达的miRNA、NK-92细胞外囊泡LEV(Large Extracellular Vesicle)表达的miRNA、NK-92细胞外囊泡EXO(Exosome)表达的miRNA、NK-92细胞外囊泡SEV(Small Extracellular Vesicle)表达的miRNA、NK-92 MI细胞外囊泡LEV表达的miRNA、NK-92 MI细胞外囊泡EXO表达的miRNA、NK-92 MI细胞外囊泡SEV表达的miRNA;1) The following 8 groups of miRNAs were analyzed for differential expression, and miRNAs with high expression levels and significant differences were screened out; the 8 groups of miRNAs were: miRNAs expressed in NK-92 cells, miRNAs expressed in NK-92 MI cells, miRNA expressed in vesicle LEV (Large Extracellular Vesicle), miRNA expressed in NK-92 extracellular vesicle EXO (Exosome), miRNA expressed in NK-92 extracellular vesicle SEV (Small Extracellular Vesicle), NK-92 MI extracellular miRNA expressed by vesicle LEV, miRNA expressed by NK-92 MI extracellular vesicle EXO, miRNA expressed by NK-92 MI extracellular vesicle SEV;
    2)将步骤1筛选出的miRNA,基于差异倍数或平均表达量的高低进行排序,筛选出差异倍数高或平均表达量高的活性miRNA-X。2) The miRNAs screened in step 1 are sorted based on the multiple of difference or the level of average expression, and the active miRNA-X with high multiple of difference or high average expression is screened out.
  2. 根据权利要求1所得的方法,其特征在于,所述NK-92/NK-92MI细胞外囊泡LEV、SEV与EXO通过如下方法获得:The method according to claim 1, wherein the NK-92/NK-92MI extracellular vesicles LEV, SEV and EXO are obtained by the following method:
    (1)将NK-92/NK-92MI细胞培养24-48h后的培养液收集到50mL离心管中,离心,去除死细胞和细胞碎片,收集上清液。(1) Collect the culture medium of NK-92/NK-92MI cells cultured for 24-48 hours into a 50mL centrifuge tube, centrifuge to remove dead cells and cell debris, and collect the supernatant.
    (2)将第(1)步收集的上清液,在4℃条件下以离心力10000g离心30min,获得沉淀为LEV,并收集上清液。(2) The supernatant collected in step (1) was centrifuged at 4° C. for 30 min at a centrifugal force of 10,000 g to obtain a precipitate as LEV, and the supernatant was collected.
    (3)将第(2)步得到的上清液转移至超离管中,在4℃条件下以离心力110000g离心70min,获得沉淀EXO,并收集上清液。(3) Transfer the supernatant obtained in step (2) to an ultracentrifuge tube, and centrifuge at a centrifugal force of 110,000 g for 70 min at 4°C to obtain precipitated EXO, and collect the supernatant.
    (4)将第(3)步得到上清液在4℃条件下以离心力167200g离心16h,获得沉淀SEV。(4) The supernatant obtained in step (3) was centrifuged at 4° C. with a centrifugal force of 167,200 g for 16 hours to obtain precipitated SEV.
  3. 一种用于治疗/预防血液肿瘤药物的活性成分,其特征在于,所述的活性成分至少选自以下之一:An active ingredient of a drug for treating/preventing blood tumors, characterized in that the active ingredient is selected from at least one of the following:
    (a)序列如SEQIDNO.1~SEQIDNO.6任一项所示的miR-X,或经修饰的miR-X衍生物;(a) miR-X whose sequence is shown in any one of SEQ ID NO.1 to SEQ ID NO.6, or a modified miR-X derivative;
    (b)前体miRNA,所述的前体miRNA能在宿主内加工成(a)中所述的miR-X;(b) precursor miRNA, which can be processed into miR-X described in (a) in the host;
    (c)多核苷酸,所述的多核苷酸能被宿主转录形成(b)中所述的前体miRNA,并加工形成(a)中所述的miRNA;(c) a polynucleotide, which can be transcribed by the host to form the precursor miRNA described in (b), and processed to form the miRNA described in (a);
    (d)表达载体,所述表达载体含有(a)中所述的miR-X的miRNA、或(b)中所述的前体miRNA、或(c)中所述的多核苷酸;(d) an expression vector containing the miRNA of miR-X described in (a), or the precursor miRNA described in (b), or the polynucleotide described in (c);
    (e)所述(a)中所述的miRNA的激动剂。(e) an agonist of the miRNA described in (a).
  4. 如权利要求3所述的活性成分,其特征在于,(e)中所述激动剂选自下组:促进miR-X表达的物质、提高miR-X活性的物质。The active ingredient according to claim 3, wherein the agonist in (e) is selected from the group consisting of substances that promote the expression of miR-X and substances that increase the activity of miR-X.
  5. 如权利要求3所述的活性成分的用途,所述的活性成分用于制备一药物,所述药物用于治疗/预防血液肿瘤。The use of the active ingredient according to claim 3, the active ingredient is used for preparing a medicine, and the medicine is used for treating/preventing blood tumors.
  6. 一种药物组合物,其特征在于,所述的药物组合物含有权利要求3所述的活性成分,和药学上可接受的溶媒或者载体。A pharmaceutical composition, characterized in that the pharmaceutical composition contains the active ingredient according to claim 3, and a pharmaceutically acceptable vehicle or carrier.
  7. 根据权利要求6所述的组合物,其特征在于,所述的药物组合物的制剂形式为冻干粉针、微针、注射剂、片剂、贴剂、胶囊、口服混悬液或介入栓塞用微球等。The composition according to claim 6, wherein the preparation form of the pharmaceutical composition is freeze-dried powder injection, microneedle, injection, tablet, patch, capsule, oral suspension or interventional embolism. microspheres etc.
  8. 根据权利要求6所述的组合物,其特征在于,所述药物组合物的递送方法有:转载法、装载药物法、直接裸RNA注射法、脂质体包裹RNA直接注射法和纳米材料组装法等阳离子材料复合物递送法,以及细菌携带质粒表达RNA法、病毒包装表达RNA法等递送方式。The composition according to claim 6, wherein the delivery methods of the pharmaceutical composition include: reprinting method, drug loading method, direct naked RNA injection method, liposome-encapsulated RNA direct injection method and nanomaterial assembly method Delivery methods such as cationic material complexes, as well as delivery methods such as bacteria carrying plasmid expression RNA methods, virus packaging expression RNA methods, etc.
PCT/CN2021/136908 2021-12-09 2021-12-09 Method for acquiring active ingredient of anti-hematologic tumor drug and use thereof WO2023102859A1 (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
PCT/CN2021/136908 WO2023102859A1 (en) 2021-12-09 2021-12-09 Method for acquiring active ingredient of anti-hematologic tumor drug and use thereof

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
PCT/CN2021/136908 WO2023102859A1 (en) 2021-12-09 2021-12-09 Method for acquiring active ingredient of anti-hematologic tumor drug and use thereof

Publications (1)

Publication Number Publication Date
WO2023102859A1 true WO2023102859A1 (en) 2023-06-15

Family

ID=86729304

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/CN2021/136908 WO2023102859A1 (en) 2021-12-09 2021-12-09 Method for acquiring active ingredient of anti-hematologic tumor drug and use thereof

Country Status (1)

Country Link
WO (1) WO2023102859A1 (en)

Citations (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20120015351A1 (en) * 2010-02-19 2012-01-19 The Regents Of The University Of Michigan miRNA Target Prediction
US20150057173A1 (en) * 2012-03-19 2015-02-26 Prestizia Methods for determining the tropism and receptor usage of a virus, in particular hiv, in body samples taken from the circulation
US20160015748A1 (en) * 2012-12-03 2016-01-21 Ohio State Innovation Foundation Activation of Innate Immunity by miRNA for Cancer and Infection Treatment
CN106191251A (en) * 2016-07-14 2016-12-07 季军 A kind of miRNAs heart failure mark and application thereof and heart failure primary dcreening operation detection kit
WO2017173367A2 (en) * 2016-03-31 2017-10-05 The United States Of America As Represented By The Secretary Of The Department Of Health And Human Services Extracellular vesicles, methods of making them, and methods of reducing liver uptake of extracellular vesicles
US20200131575A1 (en) * 2018-09-10 2020-04-30 Seoul National University R&Db Foundation Diagnostic and treatment method for endometrial cavity distorting uterine leiomyoma using microrna
CN112980947A (en) * 2019-12-12 2021-06-18 中国科学院大连化学物理研究所 Primer and kit for detecting circulating microRNA (microribonucleic acid) related to lung cancer diagnosis and treatment

Patent Citations (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20120015351A1 (en) * 2010-02-19 2012-01-19 The Regents Of The University Of Michigan miRNA Target Prediction
US20150057173A1 (en) * 2012-03-19 2015-02-26 Prestizia Methods for determining the tropism and receptor usage of a virus, in particular hiv, in body samples taken from the circulation
US20160015748A1 (en) * 2012-12-03 2016-01-21 Ohio State Innovation Foundation Activation of Innate Immunity by miRNA for Cancer and Infection Treatment
WO2017173367A2 (en) * 2016-03-31 2017-10-05 The United States Of America As Represented By The Secretary Of The Department Of Health And Human Services Extracellular vesicles, methods of making them, and methods of reducing liver uptake of extracellular vesicles
CN106191251A (en) * 2016-07-14 2016-12-07 季军 A kind of miRNAs heart failure mark and application thereof and heart failure primary dcreening operation detection kit
US20200131575A1 (en) * 2018-09-10 2020-04-30 Seoul National University R&Db Foundation Diagnostic and treatment method for endometrial cavity distorting uterine leiomyoma using microrna
CN112980947A (en) * 2019-12-12 2021-06-18 中国科学院大连化学物理研究所 Primer and kit for detecting circulating microRNA (microribonucleic acid) related to lung cancer diagnosis and treatment

Similar Documents

Publication Publication Date Title
Sharif et al. Delivery of exogenous miR-124 to glioblastoma multiform cells by Wharton’s jelly mesenchymal stem cells decreases cell proliferation and migration, and confers chemosensitivity
US9376679B2 (en) Microvesicles carrying small interfering RNAs, preparation methods and uses thereof
Yang et al. MicroRNAs: pleiotropic regulators in the tumor microenvironment
JP2022115954A (en) Stem cell fine particles
EP3702458A1 (en) Method for increasing fetal hemoglobin expression level
US10799474B2 (en) Method of treating leukemia utilizing somatic cell reprogramming
EP2077326A1 (en) Novel nucleic acid
CN109674809B (en) Composition containing miR-124-3P and application thereof in medicine for inducing neuron formation
Dalmizrak et al. Mesenchymal stem cell-derived exosomes as new tools for delivery of miRNAs in the treatment of cancer
CN103074354A (en) Application of miR-125b in red blood cell maturation
US9163234B2 (en) Culture method
CN112251411B (en) MiR-17-92 modified mesenchymal stem cells, exosomes and preparation methods and application thereof
WO2023102859A1 (en) Method for acquiring active ingredient of anti-hematologic tumor drug and use thereof
US8828965B2 (en) MiR-150 for the treatment of blood disorders
Chen et al. High-metastatic melanoma cells promote the metastatic capability of low-metastatic melanoma cells via exosomal transfer of miR-411-5p
CN113230267A (en) Application of microRNA sequence in preparation of malignant melanoma gene therapy drug
CN110075122B (en) Liver cancer therapeutic exosome medicine
CN108866058B (en) KRAS-targeted siRNA and application thereof in preparation of pancreatic cancer treatment drug
CN114836379B (en) Method for obtaining active component of anti-tumor blood medicine and application thereof
WO2024000092A1 (en) Active component of anti-oral cancer drug and use thereof
Su et al. Effect of human decidua mesenchymal stem cells-derived exosomes on the function of high glucose-induced senescent human dermal fibroblasts and its possible mechanism
CN113750110A (en) Application of mesenchymal stem cell exosome in preparation of medicine for preventing or treating type 1 diabetes and related diseases thereof
CN113897387A (en) Gene recombinant MSC with hair regeneration promoting function and preparation method and application of exosome-like nano material thereof
EP2329024A1 (en) An endogenous short hairpin rna and the use of the same
Lamb et al. MicroRNA profile of extracellular vesicles released by Müller glial cells

Legal Events

Date Code Title Description
121 Ep: the epo has been informed by wipo that ep was designated in this application

Ref document number: 21966781

Country of ref document: EP

Kind code of ref document: A1