WO2022197241A1 - A bacterial isolate and its use in the preparation of an enriched palm-based animal feed - Google Patents
A bacterial isolate and its use in the preparation of an enriched palm-based animal feed Download PDFInfo
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- WO2022197241A1 WO2022197241A1 PCT/SG2021/050149 SG2021050149W WO2022197241A1 WO 2022197241 A1 WO2022197241 A1 WO 2022197241A1 SG 2021050149 W SG2021050149 W SG 2021050149W WO 2022197241 A1 WO2022197241 A1 WO 2022197241A1
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- Prior art keywords
- palm
- blended
- fermented
- palm kernel
- animal feed
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Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N1/00—Microorganisms, e.g. protozoa; Compositions thereof; Processes of propagating, maintaining or preserving microorganisms or compositions thereof; Processes of preparing or isolating a composition containing a microorganism; Culture media therefor
- C12N1/20—Bacteria; Culture media therefor
- C12N1/205—Bacterial isolates
-
- A—HUMAN NECESSITIES
- A23—FOODS OR FOODSTUFFS; TREATMENT THEREOF, NOT COVERED BY OTHER CLASSES
- A23K—FODDER
- A23K10/00—Animal feeding-stuffs
- A23K10/10—Animal feeding-stuffs obtained by microbiological or biochemical processes
- A23K10/12—Animal feeding-stuffs obtained by microbiological or biochemical processes by fermentation of natural products, e.g. of vegetable material, animal waste material or biomass
-
- A—HUMAN NECESSITIES
- A23—FOODS OR FOODSTUFFS; TREATMENT THEREOF, NOT COVERED BY OTHER CLASSES
- A23K—FODDER
- A23K10/00—Animal feeding-stuffs
- A23K10/10—Animal feeding-stuffs obtained by microbiological or biochemical processes
- A23K10/14—Pretreatment of feeding-stuffs with enzymes
-
- A—HUMAN NECESSITIES
- A23—FOODS OR FOODSTUFFS; TREATMENT THEREOF, NOT COVERED BY OTHER CLASSES
- A23K—FODDER
- A23K10/00—Animal feeding-stuffs
- A23K10/10—Animal feeding-stuffs obtained by microbiological or biochemical processes
- A23K10/16—Addition of microorganisms or extracts thereof, e.g. single-cell proteins, to feeding-stuff compositions
-
- A—HUMAN NECESSITIES
- A23—FOODS OR FOODSTUFFS; TREATMENT THEREOF, NOT COVERED BY OTHER CLASSES
- A23K—FODDER
- A23K10/00—Animal feeding-stuffs
- A23K10/10—Animal feeding-stuffs obtained by microbiological or biochemical processes
- A23K10/16—Addition of microorganisms or extracts thereof, e.g. single-cell proteins, to feeding-stuff compositions
- A23K10/18—Addition of microorganisms or extracts thereof, e.g. single-cell proteins, to feeding-stuff compositions of live microorganisms
-
- A—HUMAN NECESSITIES
- A23—FOODS OR FOODSTUFFS; TREATMENT THEREOF, NOT COVERED BY OTHER CLASSES
- A23K—FODDER
- A23K10/00—Animal feeding-stuffs
- A23K10/30—Animal feeding-stuffs from material of plant origin, e.g. roots, seeds or hay; from material of fungal origin, e.g. mushrooms
- A23K10/37—Animal feeding-stuffs from material of plant origin, e.g. roots, seeds or hay; from material of fungal origin, e.g. mushrooms from waste material
-
- A—HUMAN NECESSITIES
- A23—FOODS OR FOODSTUFFS; TREATMENT THEREOF, NOT COVERED BY OTHER CLASSES
- A23K—FODDER
- A23K20/00—Accessory food factors for animal feeding-stuffs
- A23K20/10—Organic substances
- A23K20/189—Enzymes
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N1/00—Microorganisms, e.g. protozoa; Compositions thereof; Processes of propagating, maintaining or preserving microorganisms or compositions thereof; Processes of preparing or isolating a composition containing a microorganism; Culture media therefor
- C12N1/20—Bacteria; Culture media therefor
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12R—INDEXING SCHEME ASSOCIATED WITH SUBCLASSES C12C - C12Q, RELATING TO MICROORGANISMS
- C12R2001/00—Microorganisms ; Processes using microorganisms
- C12R2001/01—Bacteria or Actinomycetales ; using bacteria or Actinomycetales
- C12R2001/07—Bacillus
- C12R2001/125—Bacillus subtilis ; Hay bacillus; Grass bacillus
Definitions
- the present invention relates to a composition comprising Bacillus subtilis isolate.
- the present invention relates to the use of such compositions for preparing an enriched palm-based animal feed.
- Palm kernel cake is a by-product from oil palm industries and it is produced annually in large quantities (Index Mundi, 2008a, 2008b).
- PKC Palm kernel cake
- PKE palm kernel expeller
- PKE and PKM are also distinguishable by their oil content and physical characteristic.
- PKE normally comes with 8-10% residual oil from pressing, while PKM has a lower oil content of ⁇ 3% due to more efficient oil extraction by solvent (Alimon, 2004).
- PKC non-starch polysaccharides
- mannan fibres are considered as anti-nutritional factor for poultry and other monogastric animals (Saeed et al., 2019). Presence of high mannan in feed reduces the rate of nutrient hydrolysis and utilization in the diet by increasing intestinal viscosity and nutrient encapsulation (Choct and Annison, 1992).
- DFMs direct -fed microbials
- probiotics are a category of probiotics that are used in the animal industry (Callaway and Ricke, 2011).
- probiotics could aid in proper digestion of feed and absorption of nutrients by promoting healthy microbial populations in the gastrointestinal tract, thus reducing pathogen infection and enhancing animal performance (Bajagai et al., 2016).
- a variety of microorganisms have been deployed as DFM in animal feed, either in the form of single or multispecies. Lactobacillus and Bifidobacterium are the two most common genera used (Bajagai et al., 2016). Recently, Grant et al.
- Bacillus spp. has a distinct advantage over these two popular beneficial species as DFM.
- One of the highlighted characteristics of Bacillus spp. is their spore tolerance to high temperature of up to 113°C, a feature that is crucial for the bacteria to survive feed processing steps. Bacillus spores could also endure harsh gastric environment. Upon entering the animal digestive system, Bacillus could promote gut health by competitive exclusion or by production of beneficial metabolites that can protect the host from various pathogens (Grant et al., 2018; Elshaghabee et al., 2017). Furthermore, among bacteria, b-mannanases were mostly produced by Gram positive bacteria, primarily various Bacillus species (Chauhan, 2012).
- the isolate is capable of propagating and secreting mannolytic enzymes upon contact with PKC, especially for solvent-extracted palm kernel meal.
- PKC protein kinase
- PKC-containing feed Direct supplementation of mannan-degrading enzymes together with PKC-containing feed faces some challenges like enzyme substrate specificity, its thermal and pH stabilities during feed pelleting and during passage of the digesta in the animals, respectively.
- This invention identified beneficial bacteria strain/isolate that is capable of secreting mannolytic enzymes upon in contact with high-mannan feed ingredients like PKC.
- the isolate could be used either for PKC fermentation/blending or as direct fed microbials to be fermented/blended with PKC. It is reported here the isolation and identification of a native Bacillus subtilis isolate that is responsive to PKC and which serves as potential probiotics for animal feed.
- Non-starch polysaccharides constitute 70 to 90% of plant cell walls.
- NSPs non-starch polysaccharides
- kits comprising the composition comprising Bacillus subtilis strain isolate DSM33646, and instructions for using the kit. These set of instructions may include the method for producing an enriched palm-based animal feed according to an aspect of the invention as will be described below.
- a method for producing an enriched palm-based animal feed loaded with live probiotic bacteria and its secreted enzymes capable of hydrolyzing at least three forms of mannan polymers, namely glucomannan, galactomannan, and linear mannan comprising: (a) providing a palm kernel meal; (b) contacting the palm kernel meal with a Bacillus subtilis strain to form a blended or fermented product; and (c) drying the blended or fermented product, wherein the Bacillus subtilis strain is DSM33646.
- the isolated Bacillus subtilis strain of the invention was selected for its ability to grow on solvent-extracted palm kernel meal. While the terms PKE and PKM are used interchangeably in the industry, PKE refers to palm kernel cake that is mechanically extracted.
- the palm kernel meal may be prepared through any suitable solvent extraction method known to the skilled person.
- the invention provides for a unique B. subtilis strain isolate that is capable of effectively and efficiently secreted the suitable enzymes for hydrolyzing the mannan polymers present in the PKM.
- blending it is meant to include any action to mix and/or combine the various components / reactants used in the manufacturing steps carried out by the invention.
- Such mixing or blending can include any “fermentation” action which includes any breakdown (for example, a chemical breakdown) of the polymers in the PKM under any suitable conditions. Such suitable conditions are described below.
- solvent-extracted palm kernel meal it is meant to include PKM that is solvent extracted and has less than or equal to 3% oil content.
- the palm kernel meal has an oil content of less than or equal to 3 wt%.
- the method further comprises adding water to step (b), the ratio of palm biomass to water is about 1:1.5.
- the concentration of the Bacillus subtilis strain is about between 6xl0 6 to 6xl0 10 cfu per gram of the palm kernel meal.
- the step of contacting the palm kernel meal with a Bacillus subtilis strain comprises fermenting/blending the strain with the meal at a temperature of about between 25°C to 40°C for about between 4 to 72 hours.
- the fermentation and blending may be carried out between 4 to 48 hours, or 4 to 24 hours.
- the fermentation and blending may be carried out between 6 to 24 hours.
- the fermentation/blending is carried out with water and at its resultant pH of between 4.0 to 8.0 upon in contact with the meal.
- drying the fermented product is carried out at a temperature of about between 60°C to 80°C until the moisture content of the fermented product is 10% or less.
- the fermented/blended product produced by the invention has hydrolyzing activity on non-starch polysaccharides.
- the palm kernel meal comprises a high content of non-starch polysaccharides.
- the non-starch polysaccharides are glucomannan, galactomannan or linear mannan.
- the method of the invention may be carried out in a continuous or batch-wise process.
- the blended/fermented product is further fermented/blended with a fresh amount of palm kernel meal at a ratio range between 1:1 to 1:10 prior to the drying step (c).
- the blended/fermented product may be further fermented/blended with water in the ratio 1:1.5.
- fresh PKM is meant to include the solvent-extracted PKM that has yet to be exposed to the B. subtilis isolate or to be subject to any enzyme treatment, i.e. step (a) in the method steps outlined above.
- an enriched palm-based animal feed loaded with live probiotic bacteria and its secreted enzymes that can hydrolyze at least three forms of mannan polymers, wherein the feed is obtained or obtainable by a method of the invention.
- a method for preparing enriched palm-based feed comprising contacting or treating palm biomass with an isolate of a Bacillus subtilis strain deposited at Leibniz Institute, DSMZ-German Collection of Microorganisms and Cell Cultures GmbH having deposit number DSM 33646.
- the strain is selected based on its ability to grow solely on solvent- extracted palm biomass.
- the strain is included in animal feed as a probiotic.
- the strain is specific to palm kernel meal.
- the strain has mannan-degrading ability. Fermentation is accelerated by the strain of at least 4-6 hours from start of fermenting/blending.
- the strain is introduced by fermenting/blending with a mixture of PKM and water wherein the PKM to water ratio is 1:1.5 or at higher ratios.
- the strain is used at 6xl0 8 cfu/ g of PKM but dosage could vary between 6xl0 6 to 6xl0 10 cfu. Different ratios may be used.
- the water content was kept as low as possible because a high amount of water will increase the cost of drying.
- the strain and mixture are fermented/blended for between 6 to 24 hours.
- the strain and mixture is fermented/blended at a temperature range 25 to 40 degrees Celsius. In various embodiments, the temperature is 37 degrees Celsius, including the heat buildup of the apparatus. In various embodiments, the palm biomass is palm kernel meal having less than 3% oil content.
- the enriched palm-based feed is manufactured in a continuous accelerated fermentation/blending manner in a manufacturing plant.
- the enriched palm-based feed is manufactured in a batch accelerated fermentation/blending manner in a manufacturing plant.
- the feed is enriched with hydrolyzing activity capable of hydrolyzing at least 3 different forms of mannan polymers.
- the 3 different forms of mannan polymers are glucomannan, galactomannan and linear mannan.
- the fermented/blended enriched palm-based feed is in direct feed form.
- the fermented/blended enriched palm-based feed is in dried form.
- the product is further fermented/blended with fresh PKM at a ratio range between 1:1 to 1:10.
- the 1:10 ratio limit is to ensure sufficient growth of DSM33646 to reach optimal enrichment of the mannan hydrolyzing activity.
- the water to PKM ratio it is either 1:1.5 (optimized) or other ratios.
- the product is characterized by the hydrolyzing of at least 3 different forms of mannan polymers.
- the 3 different forms of mannan polymers are glucomannan, galactomannan and linear mannan.
- the further fermented/blended enriched palm-based feed is in direct feed form.
- the further fermented/blended enriched palm-based feed is in dried form.
- composition comprising the fermented/blended enriched palm-based feed of an aspect of the invention and the further fermented/blended enriched palm-based feed of an aspect of the invention where the fermenting/blending time is from 2.5 to 24 hours.
- the fermented/blended enriched palm-based feed and the further fermented/blended enriched palm-based feed can be further fermented/blended.
- an enriched palm-based animal feed comprising a Bacillus subtilis strain isolate DSM33646.
- the animal feed further comprising a solvent-extracted palm kernel meal.
- the feed has enzymatic hydrolyzing activity of at least 3 different forms of mannan polymers, the 3 different forms of mannan polymers are glucomannan, galactomannan and/or linear mannan.
- the animal feed may be in direct feed form, or in dried form. In various embodiments, the animal feed is further blended/fermented with the addition of water and palm kernel meal.
- the present invention relates to a highly responsive bacillus strain towards PKM that can secrete enzymes to breakdown mannan components of PKM in very short time.
- Current bacillus isolates are not used specifically for solvent extracted PKM (they were mostly for PKE and were not demonstrated to be "responsive" to PKE either), that mean they are very likely not responsive to PKM. None of the prior art isolates have shown they can secrete mannanases if incubated directly with palm kernel cake, especially solvent extracted PKM to the extent of our reported levels. It is about the responsiveness of the strain towards the biomass. It is the "responsiveness" of the isolated DSM33646 strain that make the illustrated production of "fermented/blended" PKM possible, and thus make the whole process unique from other (shortened fermentation duration is made possible through this invention instead of lengthy fermentation).
- Figure 1 is an illustration summarizing a method according to an embodiment of the present invention
- FIG 7 shows results obtained from Example 6
- Figure 1 a general schematic of carrying out the method according to an embodiment of the present invention is shown.
- the fermented/blended PKM product is obtained from solvent-extracted PKM by incubating it with the B. subtilis isolate of the invention which is capable of producing the necessary enzymes in a short time to breakdown different types of mannans.
- PKM was obtained from palm kernel solvent extraction plant located in East Java, Indonesia.
- the bacteria populations used to inoculate PKM were obtained from the exocarps of palm fruits from different oil palm plantations of Wilmar International.
- the Bacillus subtilis CK7 strain was obtained from PT. Wilmar Bernih Indonesia. Glucomannan (konjac; high viscosity) and mannan (l,4- -D-mannan) (Megazyme, Wicklow, Ireland), locust bean gum from Ceratonia siliqua seeds (LBG), and DNS reagent component (3,5-dinitrosalicylic acid, potassium sodium tartrate tetrahydrate and sodium hydroxide) (Sigma Chemical Co., St. Louis, MO, USA), were purchased and used.
- Each bacteria colony was grown and re-inoculated into 100 ml M9 minimal medium (6.78 g/L Na HPO 4 .7H20, 3 g/L KH 2 P0 4 , 1 g/L NH 4 CI, 0.5 g/L NaCI) containing 0.5% (w/v) LBG as sole carbon source (LBG-medium).
- M9 minimal medium (6.78 g/L Na HPO 4 .7H20, 3 g/L KH 2 P0 4 , 1 g/L NH 4 CI, 0.5 g/L NaCI) containing 0.5% (w/v) LBG as sole carbon source (LBG-medium).
- LBG-medium 0.5% (w/v) LBG as sole carbon source
- the genomic DNA of isolates with high mannolytic activity was extracted (Hoffman, 2003) and was used as template in PCR for 16S rRNA partial gene amplification ( ⁇ 500bp) using the following universal primers: 16s Forward (5'- CCTACGGGAGGCAGCAG -3') and 16s Reverse (5'-GGACTACHVGGG TWTCTAAT-3') (Takahashi et al., 2014).
- the amplicons were purified and sequenced. Sequence similarity and homology analysis against the GenBank database were carried out using the basic local alignment search tool (BLASTN) on the National Center for Biotechnology Information (NCBI) (https://www.ncbl.nlm.njh.gov/).
- the activity of crude enzymes was determined by measuring the release of reducing sugar by DNS method described by Miller (1959) with minor modifications using mannose as the standard.
- the reaction mixture comprised 950 pi of 100 mM sodium acetate buffer (pH 5.0) containing 0.5% substrate (w/v), and 50 mI of crude enzymes.
- the absorbance at 540 nm was measured with a Libra S22 UV/Vis Spectrophotometer (Biochrom, UK).
- PKC was sterilized at 121°C for 15 min. In each well of a 6-well plate, lg of PKC was inoculated with 6xl0 8 CFU of the selected Bacillus isolate or S. subtilis CK7 and 1.5 mL of water. PKC with water only was used as the negative control. Subsequently, PKC was incubated at 37°C for different time points, for example between 4 to 72 hours, or between 6 to 23 hours..
- the fermented product could be dried at a temperature range of 60°C to 80°C, until the moisture content reaches 10% or less.
- the drying process could be accompanied by vacuum treatment.
- the fermented/blended products could be sun-dried if the fermenting/blending is carried out at farm and for short-term storage at the farm.
- DSM33646 isolate to propagate and secrete mannolytic enzymes upon incubation with PKC was examined and compared to that of the CK7 strain.
- DSM33646 and CK7 were re introduced into PKM (6xl0 8 cfu/g).
- the water extracts of the PKM inoculated with DSM33646 isolate at different fermenting/blending times showed significant increase in mannolytic activities (against at least 3 forms of mannan substrates LBG, konjac, and linear mannan), while inoculation of CK7 strain showed no increase in the activity.
- this invention has identified a B. subtilis isolate that is highly responsive to mannan-rich PKC. This isolate could be further developed for use in the feed industry, either in fermentation/blending of PKC or direct inclusion in PKC-based diet as DFM.
- EXAMPLE 2 An inventive process to select for PKM-specific strain
- Bacteria associated with loose palm fruits were inoculated into PKM and water (1:5, w/w), incubated for >2 weeks at 37°C for selection of PKM-specific strain. Viable bacteria in the culture were then propagated and tested. DSM33646, a Bacillus subtilis strain was isolated from the process.
- mannan-degrading bacteria were either screened from a bacteria collection or isolated directly from PKE (with 8-10% oil content), food, environment without going through the inventive process.
- Low-oil PKM serves as a special natural feedstock to isolate microbes that could use mannan fiber efficiently, as the oil content is significantly lower than PKE, avoiding isolating bacteria that could survive based on oil as carbon source.
- a published Bacillus subtilis strain CK7 which was isolated from the environment and found to have mannan-degrading ability was used as a control to show the advancement of the strain screened through the inventive process.
- One unit (U) of the enzyme activity is defined as the amount of the enzymes required to release 1 pmol of mannose equivalent from 0.5% of respective substrates (Konjac/glucomannan, LBG/galactomannan, and Linear mannan) per minute after incubation at 55°C (normalized to per gram of the fermented/blended product).
- EXAMPLE 4 Loaded enzyme activity in the PKM fermented/blended product obtained from a method of the invention.
- Examples 4 and 5 below describe how we can scale up the fermenting/blending while retaining enzyme activity in the fermented/blended meal.
- the enzyme activity is measured by the amount of reducing sugar released from the enzymatic assay per minute using enzymes harvested/recovered from the fermenting/blending in DNS assay.
- the assay was conducted as follows: a. Reaction mixture: 50ul of extracted enzymes harvested/recovered from the PKM (with necessary dilutions) + 950ul linear mannansolution (0.5% linear mannan, 0.1M pH 5.0 buffer) b. Reaction condition: 55°C, lOOOrpm, lhr
- DNS test 300ul reaction mixture + 900ul DNS solution; heated at lOOdc for 5mins, the absorbance is measure at 540nm.
- EXAMPLE 5 Loaded enzyme activity in the PKM fermented/blended product.
- EXAMPLE 6 Loaded enzyme activity in the PKM fermented/blended with different dosages of DSM33646.
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CN101248835A (en) * | 2008-03-27 | 2008-08-27 | 黄逸强 | Method for degrading palm dregs and palm kernel |
WO2015197623A1 (en) * | 2014-06-26 | 2015-12-30 | Novozymes A/S | Improved protein bio-availability of palm kernel cake using milder expeller conditions and enzymatic treatment |
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US20040151804A1 (en) * | 2001-04-05 | 2004-08-05 | Futoshi Yokomizo | Mannose-containing palm kernel meal |
CN101248835A (en) * | 2008-03-27 | 2008-08-27 | 黄逸强 | Method for degrading palm dregs and palm kernel |
WO2015197623A1 (en) * | 2014-06-26 | 2015-12-30 | Novozymes A/S | Improved protein bio-availability of palm kernel cake using milder expeller conditions and enzymatic treatment |
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