WO2021244623A1 - Ferritin-ace-2 short peptide nanodrug - Google Patents

Ferritin-ace-2 short peptide nanodrug Download PDF

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WO2021244623A1
WO2021244623A1 PCT/CN2021/098204 CN2021098204W WO2021244623A1 WO 2021244623 A1 WO2021244623 A1 WO 2021244623A1 CN 2021098204 W CN2021098204 W CN 2021098204W WO 2021244623 A1 WO2021244623 A1 WO 2021244623A1
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ferritin
amino acid
acid sequence
protein
ace2
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PCT/CN2021/098204
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French (fr)
Chinese (zh)
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柯天一
姚德惠
劳芳
丁凤姣
王晓飞
刘岩
王闯
成健伟
丁会
欧阳芳幸
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昆山新蕴达生物科技有限公司
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Priority to CN202180018913.4A priority Critical patent/CN115244068A/en
Publication of WO2021244623A1 publication Critical patent/WO2021244623A1/en

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    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides
    • A61K38/04Peptides having up to 20 amino acids in a fully defined sequence; Derivatives thereof
    • A61K38/08Peptides having 5 to 11 amino acids
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides
    • A61K38/04Peptides having up to 20 amino acids in a fully defined sequence; Derivatives thereof
    • A61K38/10Peptides having 12 to 20 amino acids
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P31/00Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
    • A61P31/12Antivirals
    • A61P31/14Antivirals for RNA viruses
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    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
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    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/46Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates
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    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K19/00Hybrid peptides, i.e. peptides covalently bound to nucleic acids, or non-covalently bound protein-protein complexes
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    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K7/00Peptides having 5 to 20 amino acids in a fully defined sequence; Derivatives thereof
    • C07K7/04Linear peptides containing only normal peptide links
    • C07K7/06Linear peptides containing only normal peptide links having 5 to 11 amino acids
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K7/00Peptides having 5 to 20 amino acids in a fully defined sequence; Derivatives thereof
    • C07K7/04Linear peptides containing only normal peptide links
    • C07K7/08Linear peptides containing only normal peptide links having 12 to 20 amino acids
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    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
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    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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    • C12N5/00Undifferentiated human, animal or plant cells, e.g. cell lines; Tissues; Cultivation or maintenance thereof; Culture media therefor
    • C12N5/10Cells modified by introduction of foreign genetic material
    • YGENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02ATECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
    • Y02A50/00TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE in human health protection, e.g. against extreme weather
    • Y02A50/30Against vector-borne diseases, e.g. mosquito-borne, fly-borne, tick-borne or waterborne diseases whose impact is exacerbated by climate change

Definitions

  • the invention relates to the field of recombinant fusion protein therapeutic drugs. Specifically, the present invention relates to a recombinant fusion ferritin drug suitable for treating diseases caused by coronaviruses of the coronavirus family.
  • Pneumonia caused by coronaviruses especially the new coronavirus pneumonia (Corona Virus Disease 2019, COVID-19) caused by the new coronavirus (SARS-CoV-2) is a sudden disease that poses a major threat to human health.
  • SARS-CoV-2 On January 7, 2020, the Wuhan Institute of Virology of the Chinese Academy of Sciences detected SARS-CoV-2 and obtained the entire genome sequence of the virus. On February 3, by comparing SARS-CoV-2 with the partial sequence of the coronavirus detected in the laboratory early, it found that the sequence of the new coronavirus was as high as 96% with that of a coronavirus in a bat sample. SARS-CoV-2 can invade cells in the same way as SARS-CoV, that is, by binding to the human ACE2 cell receptor (A pneumonia outbreak associated with a new coronavirus of probable bat origin, Nature, Peng Zhou et.al, 2020 ).
  • the R0 value (basic number of infections) of SARS-CoV-2 calculated by my country's CDC is as high as 3.77 (Epidemiological and clinical features of the 2019 novel coronavirus outbreak in China, Yang Yang et.al, Medrxiv, February 12, 2020), and Because COVID-19 has a long asymptomatic incubation period and a considerable proportion of asymptomatic carriers, the huge patient population caused by it has led to a run on the medical system, and the economic recession caused by it has made the development of effective therapeutic drugs imminent.
  • SARS-CoV-2 surface spike glycoprotein (S protein) receptor binding domain (RBD) and human angiotensin converting enzyme 2 through structural biology methods.
  • ACE2 Angiotensin-converting enzyme 2
  • the crystal structure of the protein complex (Structural basis for the recognition of the 2019-nCoV by human ACE2, Renhong Yan et.al, bioRxiv, February 20, 2020; Crystal structure of the 2019 -nCoV spike receptor-binding domain bound with the ACE2receptor, Jun Lan et.al, bioRxiv, February 20, 2020), revealing the interaction site between COVID-19 RBD and ACE2, which makes it possible to block SAR-2-CoV- It is possible to treat COVID-19 by the interaction between 2/ACE2 protein.
  • MIT’s BLPentelute research team analyzed the co-crystal structure of the new coronavirus S protein receptor binding domain (RBD) and ACE, looking for peptide conjugates that can block the combination of the two, and obtained a peptide fragment derived from the ACE2 ⁇ 1 helix.
  • Called S-protein binding protein 1 (SBP1), SBP1 is composed of 23 amino acids. It has a very high binding affinity (nanomolar level) and has the potential to block the virus from entering human cells. It is therapeutic Prospects (The first-in-class peptide binder to the SARS-CoV-2 spike protein, G. Zhang et. al, bioRxi, March 30, 2020).
  • ferritin a substance naturally possessed by human endogenously, is similar to the repressive peptide SBP1 derived from human ACE2. It is both derived from human itself and has the advantage of low immunogenicity. In addition, ferritin has a molecular weight of about 450kDa and has a spherical cage-like structure that is self-assembled by 24 subunits.
  • the present invention utilizes the unique advantages of ferritin as a drug carrier, and connects the coding sequence of the RBD/ACE2 repressor peptide of SAR-2-CoV-2 to the N-terminus or C-terminus of the ferritin monomer subunit (or the C-terminus is truncated).
  • a truncated sequence of ⁇ -helix) to construct multiple fusion proteins of ferritin and RBD/ACE2 repressor peptide.
  • the fusion protein can self-assemble into a 24-mer, which can display multiple ferritin surfaces.
  • Multivalent nano therapeutic drugs that block peptides and prolong the half-life of peptide therapeutics to achieve the purpose of treating new type of coronary pneumonia.
  • the present invention provides four RBD/ACE2 repressor peptides, all of which are derived from human ACE-2 protein and have binding affinity to the S protein of SAR-2-CoV-2.
  • the invention carries out Cys point mutations on the ferritin monomer subunit sequence, which can reduce the generation of aggregates and improve the soluble expression and renaturation efficiency of the protein.
  • the present invention provides a truncated mutant of the monomer subunit of ferritin, so that the repressor peptide can be displayed on the outer surface of ferritin when it is connected to the C-terminus of ferritin.
  • the present invention proposes the following technical solutions:
  • the present invention provides a RBD/ACE2 repressor peptide.
  • the invention provides a fusion protein.
  • the present invention provides a nanoparticle containing a fusion protein.
  • the present invention provides a method for producing the aforementioned RBD/ACE2 repressor peptide, fusion protein or nanoparticle.
  • the present invention provides a fusion protein pharmaceutical composition.
  • the present invention provides a SARS-CoV-2 surface spike glycoprotein (S protein) antagonist.
  • S protein SARS-CoV-2 surface spike glycoprotein
  • the present invention provides a method of generating therapeutic drugs against viruses of the coronavirus family.
  • the invention provides a nucleic acid molecule.
  • the invention provides an expression construct.
  • the present invention provides a recombinant cell.
  • the present invention provides the aforementioned RBD/ACE2 repressor peptide, fusion protein, nanoparticle, pharmaceutical composition or SARS-CoV-2 surface spike glycoprotein (S protein) antagonist, nucleic acid molecule, expression construct, recombinant Use of cells in the preparation of S protein inhibitors, competitive inhibitors of the binding of ACE2 and S protein, or in the preparation of drugs for preventing and/or treating coronavirus infections or diseases caused by the coronavirus infections the use of.
  • S protein surface spike glycoprotein
  • the present invention has the following beneficial effects:
  • the ferritin-repressor peptide fusion protein constructed in the present invention can self-assemble to form a cage protein, and multiple repressor peptides are loaded on the outer surface of ferritin nanoparticles, which can bind to the coronavirus S protein to prevent the coronavirus from entering human cells , To achieve the effect of prevention of coronavirus infection and treatment of infection.
  • the product of the present invention prolongs the therapeutic half-life of suppressor peptides by fusing ferritin subunits on the one hand; on the other hand, 24 suppressor peptides can be loaded on a ferritin molecule, providing multivalence
  • the treatment plan can greatly improve the ability to bind to the coronavirus; on the other hand, the EPR effect of ferritin can make the therapeutic drug relatively enriched in the tissues with high expression of ACE2, thereby targeted protection of some vulnerable to coronavirus infection Organ;
  • the two components of the ferritin-repressor peptide fusion protein constructed in the present invention are derived from the human body's own protein, so the immunogenicity is low.
  • the fusion protein obtained by the E. coli expression system of the present invention can self-assemble with simple and high yield to form a cage protein with binding activity.
  • the preparation method is simple, easy to operate, and has high pharmaceutical value and industrialization value.
  • the Cys with active sulfhydryl reaction site in wild-type ferritin is mutated, thereby reducing the possibility of side effects caused by the active sulfhydryl group reaction in the body, and also reducing the drug preparation process.
  • the possibility of reactive sulfhydryl groups is conducive to drug control.
  • Figure 1 shows a map of plasmid pET-22b(+).
  • Figure 2 shows a map of the recombinant plasmid pET-22b-XYD-406-000.
  • Figure 3 shows a map of the recombinant plasmid pET-22b-XYD-407-000.
  • Figure 4 shows a map of the recombinant plasmid pET-22b-XYD-408-000.
  • Figure 5 shows the restriction map of recombinant plasmids pET-22b-XYD-406-000, pET-22b-XYD-407-000 and pET-22b-XYD-408-000.
  • Figure 6 shows the recombinant plasmids pET-22b-XYD-406-000, pET-22b-XYD-407-000 and pET-22b-XYD-408-000 transformed E. coli BL21(DE3). The growth of strains 406, 407 and 408.
  • Figure 7 shows the protein in the supernatant and precipitate obtained by centrifugation after lysis of strains 406, 407, and 408, where S represents the supernatant, P represents the precipitate, and 1-3 are the three of strains 406, 407, or 408, respectively.
  • S represents the supernatant
  • P represents the precipitate
  • 1-3 are the three of strains 406, 407, or 408, respectively.
  • Figure 8 shows the TEM results of nanoparticle samples XYD-406-000, XYD-407-000 and XYD-408-000.
  • Figure 9 shows the average particle size of nanoparticle sample XYD-406-000.
  • Figure 10 shows the average particle size of nanoparticle sample XYD-407-000.
  • Figure 11 shows the average particle size of nanoparticle sample XYD-408-000.
  • Figure 12 shows the detection result of the binding activity of nanoparticle sample XYD-406-000 and S-RBD.
  • Figure 13 shows the detection result of the binding activity of nanoparticle sample XYD-407-000 and S-RBD.
  • Figure 14 shows the detection results of the binding activity of nanoparticle sample XYD-408-000 and S-RBD.
  • RBD/ACE2 repressor peptide refers to the ability to inhibit the binding of new coronavirus (SARS-CoV-2) surface spike glycoprotein (S protein) to angiotensin converting enzyme 2 (ACE-2)
  • ACE-2 angiotensin converting enzyme 2
  • the peptide fragment of the new coronavirus (SARS-CoV-2) surface spike glycoprotein (S protein) receptor binding domain (RBD) to prevent the new coronavirus (SARS-CoV-2) infection
  • the human body may reduce the symptoms of those who have been infected.
  • nanoparticle refers to particles formed from self-assembled monomeric subunit proteins, which can be hollow or solid structures.
  • ferritin subunit proteins self-assemble into ferritin nanoparticles with a cavity in the middle.
  • the shape of the nanoparticles of the present invention is generally spherical or cage-like, although other shapes, such as rod-shaped, cubic, plate-shaped, oblong, oval, etc., can also be used in the practice of the present invention.
  • self-assembling protein refers to a protein that can form nanoparticles by regularly arranging to form multimers while being expressed without the aid of a specific inducer.
  • coronavirus belongs to the Coronavirus family, a genus of Coronavirus, which can infect mammals and birds and cause various diseases of the respiratory system, digestion, and central nervous system. According to genomic and serological differences, coronaviruses can be divided into four different genera: ⁇ , ⁇ , ⁇ , and ⁇ . At present, only ⁇ and ⁇ are coronaviruses that infect humans. Up to now, six human coronaviruses (HCoV) from two genera ( ⁇ and ⁇ ) have been identified.
  • HoV human coronaviruses
  • ⁇ genus coronaviruses include NL63 and 229E, and ⁇ genus coronaviruses include OC43, HKU1, and acute respiratory syndrome coronavirus ( SARS-CoV), Middle East Respiratory Syndrome Coronavirus (MERS-CoV) and Novel Coronavirus (SARS-CoV-2).
  • SARS-CoV acute respiratory syndrome coronavirus
  • MERS-CoV Middle East Respiratory Syndrome Coronavirus
  • SARS-CoV-2 Novel Coronavirus
  • the term “ferritin” refers to an iron storage structure composed of two parts: a protein shell and an iron core.
  • the protein shell of ferritin is a clathrin structure (about 12nm in outer diameter and about 8nm in inner diameter) formed by self-assembly of 24 subunits, and the main component of the iron core is ferrihydrite.
  • the protein shell of ferritin without an iron core is also called “deferritin”.
  • “Ferritin” as used herein includes eukaryotic ferritin and prokaryotic ferritin, preferably eukaryotic ferritin, more preferably mammalian ferritin, such as human ferritin.
  • Eukaryotic ferritin usually includes a heavy chain ferritin monomer subunit (H, 21kDa) and a light chain ferritin monomer subunit (L, 19kDa).
  • the H subunit is responsible for the oxidation of Fe(II) to Fe(III) and includes catalytic iron oxidase sites, while the L subunit plays a role in iron nucleation.
  • the H and L subunits assemble together into a 24-mer hybrid ferritin. In different tissues and organs of the body, the ratio of H and L subunits in ferritin molecules is different. However, through recombination, it is also possible to obtain "H ferritin" assembled from only H subunits or "L ferritin” assembled from L subunits only.
  • human heavy chain ferritin (hereinafter abbreviated as “human HFn”) refers to ferritin assembled from only the heavy chain monomer subunits of human ferritin.
  • Human LFn Human light chain ferritin
  • fusion protein refers to a natural or synthetic molecule composed of one or more of the above-mentioned molecules, in which two or more peptide or protein (including glycoprotein)-based molecules with different specificities The selected ones are fused together by chemical or amino acid-based linker molecules.
  • the connection can be achieved by C-N fusion or N-C fusion (in the 5' ⁇ 3' direction).
  • the present invention provides an RBD/ACE2 repressor peptide, wherein the RBD/ACE2 repressor peptide comprises an amino acid having 80% or more identity with the amino acid sequence shown in SEQ ID NO. 1, 2, 3, or 4.
  • the sequence is preferably an amino acid sequence having 85%, 90%, 95%, 96%, 97%, 98%, 99% or more identity, more preferably an amino acid sequence having 98% or more than 99% identity; more preferably,
  • the amino acid sequence of the RBD/ACE2 repressor peptide is shown in SEQ ID NO. 1, 2, 3 or 4.
  • the present invention provides a fusion protein, wherein the fusion protein comprises the RBD/ACE2 repressor peptide.
  • the fusion protein further comprises at least a part of a self-assembled, monomeric subunit.
  • the present invention provides a nanoparticle comprising a fusion protein, wherein the fusion protein comprises an RBD/ACE2 repressor peptide and at least a part of a self-assembled, monomeric subunit, and wherein the nanoparticle is on its surface
  • the RBD/ACE2 repressor peptide is shown above.
  • the RBD/ACE2 repressor peptide can suppress the surface spike glycoprotein (S protein) of the new coronavirus (SARS-CoV-2) and angiotensin converting enzyme 2 (ACE-2). ) Combine.
  • the self-assembled monomeric subunit protein, monomeric subunit protein, self-assembled protein, self-assembled subunit protein, etc. of the present invention are full-length, monomeric polypeptides, or any part or variant thereof, It can guide the self-assembly of monomer self-assembled subunit proteins into nanoparticles.
  • Such proteins are known to those skilled in the art.
  • self-assembling proteins examples include, but are not limited to, ferritin monomer subunits, monomeric encapsulin proteins, monomeric 03-33 proteins, monomeric thiooxygenase reductase (SOR) proteins, monomers Body 2,4-Dioxytetrahydropteridine synthase (LS) protein, monomeric pyruvate dehydrogenase complex (PDC) protein, monomeric hydrolipoamide acetyltransferase (E2) protein, and The envelope (Env) protein of alphavirus (such as Chikungunya virus).
  • ferritin monomer subunits examples include, but are not limited to, ferritin monomer subunits, monomeric encapsulin proteins, monomeric 03-33 proteins, monomeric thiooxygenase reductase (SOR) proteins, monomers Body 2,4-Dioxytetrahydropteridine synthase (LS) protein, monomeric pyruvate dehydrogenase complex (PDC) protein,
  • the ferritin monomer subunit is any one or at least one of ferritin derived from mammalian origin, ferritin derived from amphibian, ferritin derived from bacteria or ferritin derived from plant origin.
  • the two combined ferritin monomer subunits are preferably mammalian or bacterial ferritin monomer subunits.
  • the mammalian-derived ferritin includes any one or a combination of at least two of human-derived ferritin, murine-derived ferritin, or horse spleen ferritin.
  • the bacterial-derived ferritin includes Helicobacter pylori ferritin, Escherichia coli ferritin, or Pyrococcus furiosus ferritin.
  • the source of the ferritin includes any one or a combination of at least two of natural extraction products, artificial synthesis products, or genetic engineering technology products.
  • the ferritin monomer subunit includes a mutated amino acid sequence; preferably, the mutated amino acid is cysteine (Cys); more preferably, the cysteine is mutated to glutamic acid (Glu), serine (Ser) or alanine (Ala).
  • the ferritin monomer subunit is a truncation mutant; preferably, the truncation mutant is an ⁇ -helical truncation mutant at the C-terminus of the heavy chain ferritin monomer subunit (H)
  • the truncation mutant is an epsilon helix truncation mutant at the C-terminus of the light chain ferritin monomer subunit (L).
  • the nanoparticle comprises at least one ferritin monomer subunit, preferably, the ferritin monomer subunit is selected from heavy chain ferritin monomer subunit (H) or light chain iron Protein monomer subunit (L); preferably, the heavy chain ferritin monomer subunit (H) and/or the light chain ferritin monomer subunit (L) form a nanoparticle, more preferably, the nano The particle contains 24 ferritin monomer subunits, wherein the ratio of heavy chain ferritin monomer subunits (H) to light chain ferritin monomer subunits (L) is 0:24-24:0; preferably, The heavy chain ferritin monomer subunit (H) is a human heavy chain ferritin monomer subunit (H); preferably, the light chain ferritin monomer subunit (L) is a human light chain ferritin monomer Subunit (L).
  • H heavy chain ferritin monomer subunit
  • L light chain ferritin monomer Subunit
  • the heavy chain ferritin monomer subunit (H) comprises an amino acid sequence having 80% or more identity with the amino acid sequence shown in SEQ ID NO. 5, 6, 7, or 8, preferably having 85 %, 90%, 95%, 96%, 97%, 98%, 99% or more identical amino acid sequences, more preferably 98% or more 99% identical amino acid sequences; more preferably, the heavy chain iron
  • the amino acid sequence of the protein subunit is shown in SEQ ID NO. 5, 6, 7 or 8.
  • the fusion protein comprises the RBD/ACE2 repressor peptide and the heavy chain ferritin monomer subunit (H).
  • the fusion protein comprises an amino acid sequence having 80% or more identity with the amino acid sequence shown in SEQ ID NO. 9, 10, 11, 12, 13, 14, 15, 16, 17, 18 or 19.
  • the amino acid sequence of the protein is shown in SEQ ID NO. 9, 10, 11, 12, 13, 14, 15, 16, 17, 18 or 19.
  • the light chain ferritin subunit (L) comprises an amino acid sequence having 80% or more identity with the amino acid sequence shown in SEQ ID NO. 20, 21, 22 or 23, preferably having 85%, An amino acid sequence with 90%, 95%, 96%, 97%, 98%, 99% or more identity, more preferably an amino acid sequence with 98% or more than 99% identity; more preferably, the light chain ferritin The amino acid sequence of the subunit is shown in SEQ ID NO. 20, 21, 22 or 23.
  • the fusion protein comprises the RBD/ACE2 repressor peptide and the light chain ferritin subunit (L).
  • the fusion protein comprises an amino acid sequence having 80% or more identity with the amino acid sequence shown in SEQ ID NO. 24, 25, 26, 27, 28, 29, 30, 31, 32, 33 or 34, Preferably, an amino acid sequence having 85%, 90%, 95%, 96%, 97%, 98%, 99% or more identity, more preferably an amino acid sequence having 98% or more than 99% identity; more preferably, the The amino acid sequence of the fusion protein is shown in SEQ ID NO. 24, 25, 26, 27, 28, 29, 30, 31, 32, 33 or 34.
  • the present invention provides a method for producing the aforementioned RBD/ACE2 repressor peptide, fusion protein or nanoparticle, the method comprising combining one or more nucleic acids encoding the RBD/ACE2 repressor peptide or fusion protein
  • the molecule is introduced into the cell, and the cell is cultured under conditions suitable for expression of the RBD/ACE2 repressor peptide, fusion protein, or formation of nanoparticles.
  • the present invention provides a pharmaceutical composition comprising the aforementioned RBD/ACE2 repressor peptide, fusion protein or nanoparticle.
  • the pharmaceutical composition is a drug for coronaviruses of the coronavirus family; preferably, the viruses of the coronavirus family are selected from the group consisting of new coronavirus pneumonia virus (SARS-CoV-2), SARS-CoV, and MERS. -Cov, 229E, NL63, OC43 and HKU1.
  • SARS-CoV-2 new coronavirus pneumonia virus
  • SARS-CoV SARS-CoV
  • MERS new coronavirus pneumonia virus
  • the pharmaceutical composition further comprises another therapeutic agent; the another therapeutic agent is selected from immunotherapeutic agents or other drugs that inhibit viruses of the coronavirus family.
  • the virus of the coronavirus family is a new type of coronavirus (SARS-CoV-2); the pharmaceutical composition is a drug for the new type of coronavirus (SARS-CoV-2).
  • the present invention provides a SARS-CoV-2 surface spike glycoprotein (S protein) antagonist, which comprises the aforementioned RBD/ACE2 repressor peptide, fusion protein or nanoparticle, said repressor peptide, fusion protein or Nanoparticles work by binding to SARS-CoV-2 surface spike glycoprotein (S protein).
  • S protein SARS-CoV-2 surface spike glycoprotein
  • the present invention provides a method of generating a therapeutic drug for viruses of the coronavirus family, the method comprising:
  • the present invention provides a nucleic acid molecule comprising a nucleic acid sequence encoding the aforementioned RBD/ACE2 repressor peptide or fusion protein or nanoparticle.
  • the nucleic acid sequence comprises a nucleotide sequence having 80% or more identity with the nucleotide sequence shown in SEQ ID NO. 35, 36 or 37, preferably 85%, 90%, 95% , 96%, 97%, 98%, 99% or more identical nucleotide sequences, more preferably 98% or more 99% identical nucleotide sequences; more preferably, the nucleic acid sequence is as SEQ ID NO As shown in .35, 36 or 37.
  • the nucleic acid molecule is a codon optimized nucleic acid molecule.
  • the present invention provides an expression construct comprising the aforementioned nucleic acid molecule.
  • the present invention provides a recombinant cell comprising the aforementioned nucleic acid molecule or expression construct.
  • the present invention provides the aforementioned RBD/ACE2 repressor peptides, fusion proteins, nanoparticles, pharmaceutical compositions, SARS-CoV-2 surface spike glycoprotein (S protein) antagonists, therapeutic drugs, nucleic acid molecules, expression constructs Use of recombinant cells or recombinant cells in the preparation of S protein inhibitors, competitive inhibitors of ACE2 and S protein binding, or in the preparation of prevention and/or treatment of coronavirus infections or diseases caused by the coronavirus infections
  • the disease caused by the coronavirus infection is a disease caused by a new coronavirus infection, especially a new coronavirus pneumonia.
  • the RBD/ACE2 repressor peptide, fusion protein, nanoparticle, pharmaceutical composition, SARS-CoV-2 surface spike glycoprotein (S protein) antagonist, therapeutic drug, nucleic acid molecule, expression construct or recombinant cell of the present invention can be used for Prevent and/or treat infections of coronaviruses of the coronavirus family, especially for the treatment of diseases caused by new coronavirus infections, especially new coronavirus pneumonia.
  • the amino acid sequence of the RBD/ACE2 repressor peptide of the S protein of the candidate SARS-CoV-2 is as follows:
  • Wild-type HFn monomer subunit protein its amino acid sequence is as follows (total 183 amino acids):
  • mHFn1 Mutant HFn1 monomer subunit protein (mHFn1): Remove the ⁇ -helix at the C-terminus of the wild-type HFn monomer subunit protein to obtain mHFn1. Its amino acid sequence is as follows (a total of 163 amino acids):
  • HFn2 monomer subunit protein (mHFn2): The Cys at positions 91, 103, and 131 of the wild-type HFn monomer subunit protein were mutated to Glu, Ala, and Ala, respectively, to obtain mHFn2. Its amino acid sequence is as follows (total 183 Amino acids):
  • HFn3 monomer subunit protein (mHFn3): Remove the ⁇ -helix at the C-terminus of the wild-type HFn monomer subunit protein, and mutate the Cys at positions 91, 103, and 131 to Glu, Ala, and Ala, respectively, to obtain The amino acid sequence of mHFn3 is as follows (163 amino acids in total):
  • Wild-type LFn monomer subunit protein its amino acid sequence is as follows (a total of 174 amino acids):
  • LFn1 monomer subunit protein mLFn1
  • LFn C126A Ala
  • mLFn2 monomer subunit protein mLFn2 monomer subunit protein
  • Mutant LFn3 monomer subunit protein (mLFn3): Remove the ⁇ -helix at the C-terminus of the wild-type LFn monomer subunit protein, and mutate the Cys at position 127 to Ala to obtain mLFn3.
  • the amino acid sequence is as follows (total 157 amino acids):
  • the coding genes of the above-mentioned polypeptides, proteins or fusion proteins are synthesized.
  • the commonly used vector pET-22b(+) for expressing foreign proteins in Escherichia coli is selected, ampicillin resistance (Amp + ), Nde I and Bam H I restriction sites are selected to insert the target gene, and the recombinant pET-22b plasmid is obtained. Restriction map and gene sequencing confirmed that the expression vector was successfully constructed. Among them, the plasmid map of pET-22b(+) is shown in Figure 1.
  • E. coli BL21(DE3) was selected as the host bacteria, the recombinant pET-22b plasmid containing the target gene was transformed into competent cells of the host bacteria, and the positive clones were screened through the ampicillin resistance plate to determine the recombinant strain.
  • E.coli BL21(DE3) competent cells Take out E.coli BL21(DE3) competent cells from the refrigerator at -80°C, place them on ice and melt (about 5min), in an ice bath, take 0.5-1 ⁇ l plasmid resuspension and add it to 20 ⁇ l feeling Mix well in the conditioned cells, and incubate them on ice for 30 min.
  • Bacterial lysis Take 30mL of bacteria liquid, centrifuge at 5000-8000r/min for 10-30min, discard the supernatant, add 30mL 20mM Tris-HCl, pH8.0 buffer solution, resuspend it evenly, and break it in a high-pressure homogenizer at 800-1000bar for 3 times .
  • Protein purification Centrifuge the broken bacterial solution to remove E. coli fragments. Heat the supernatant at 72°C for 15 minutes to precipitate impurities. After centrifugation to remove the precipitate, the supernatant is separated and purified with a Superdex 200 pg (GE Healthcare) column and determined by electrophoresis purity. The purified HFn can be lyophilized and stored, or stored in a pH 8.0, 50mM Tris-HCl solution.
  • SDS-PAGE sample preparation Take 100 ⁇ L of the above bacterial lysate, centrifuge at 8000-10000rpm for 10-20min, take 20 ⁇ L of supernatant to another centrifuge tube, add 5 ⁇ L of 5 ⁇ loading buffer and mix well, 85 Incubate at -95°C for 5 minutes, this is the lysate supernatant sample; add 100 ⁇ L of 20mM Tris-HCl, pH8.0 buffer to resuspend the pellet for the remaining pellet, add 20 ⁇ L of resuspension to 5 ⁇ L of 5 ⁇ sample buffer and mix well ,Incubate at 85-95°C for 5min, this is the lysate precipitation sample.
  • the indirect ELISA method was used to detect the binding activity of the purified protein with the S protein of SARS-CoV-2, thereby proving whether there is a target protein with binding activity in the refolding solution.
  • Coating plate Coat the sample to be tested or the ACE-2 reference product in a 96-well plate, and incubate overnight in a refrigerator at 4°C;
  • Blocking Add 300 ⁇ L/well of 5% BSA blocking solution, cover with sealing film, and incubate in a 37°C incubator for 2h;
  • Color development add TMB one-step color development solution, pay attention to avoid light, 100 ⁇ L/well, avoid light for 5min, 10min and 30min respectively, and detect the absorbance at 650nm with a microplate reader immediately.
  • Example 1 Gene sequence design of ACE2-P1-mHFn2 fusion protein
  • Example 4 Construction, expression and purification of bacterial cells expressing the fusion protein of Example 1-3
  • the three recombinant plasmids obtained were double digested with Xho I and XbaI (near Nde I and BamH I, respectively), and the digested fragments contained the target gene and were about 600-800 bp in length.
  • the digestion identification diagram is shown in Figure 5. After double enzyme digestion, the band of the target gene is about 750bp in the electrophoresis diagram, and the size is near the theoretical value, indicating that the target gene has been constructed into the expression plasmid, and the recombinant plasmid is 100% sequence correct after sequencing.
  • recombinant plasmids were respectively transformed into E. coli BL21 (DE3) to obtain recombinant strains 406 (BP-HS-008), 407 (BP-HS-009) and 408 (BP-HS-010).
  • recombinant strains 406 BP-HS-008
  • 407 BP-HS-009
  • 408 BP-HS-010
  • the growth of the colony is shown in Figure 6.
  • the recombinant strains can grow on the resistant LB plate, and the number of clones is large. It can be judged that the recombinant strains have the corresponding resistance, and the plasmid pET-22b( +
  • glycerol Take a single colony with a higher expression on the resistant plate for amplification, add glycerol with a final concentration of 20% when the OD 600 reaches 1.5 to 2.0, and distribute 1 mL/tube. This is a glycerol bacteria.
  • the glycerol bacteria are stored in a refrigerator at -80°C and used for subsequent fermentation.
  • the glycerol bacteria of the three plasmids were thawed at room temperature and inoculated at 1% in LB medium, cultured at 37°C, 220rpm shaker to OD 600 to 1.0, added with a final concentration of 0.5mM IPTG, and induced the target protein at 25°C Expression, induce 4-5h to terminate the culture, and obtain the fermentation broth.
  • the fermentation broth of the above-mentioned glycerol bacteria was taken, and the bacteria were collected by centrifugation at 4° C. and 10,000 rpm for 25 min to obtain the bacteria broths containing the respective plasmid bacteria.
  • Bacterial lysis Take 30 mL of each of the three plasmid bacteria, centrifuge at 5000 r/min for 15 min, discard the supernatant, add 30 mL of 20 mM Tris-HCl, pH 8.0 buffer to resuspend, and place in a high-pressure homogenizer at 1000 bar (Yonglian Biotech, UH-03) was broken three times to obtain a cell lysate.
  • SDS-PAGE sample preparation Take 100 ⁇ L of the above-mentioned bacterial lysate, centrifuge at 10000rpm for 10min, take 20 ⁇ L of supernatant to another centrifuge tube, add 5 ⁇ L of 5 ⁇ loading buffer to mix, incubate at 95°C for 5min, this is the lysate Supernatant sample (three parallel samples for the same sample, labeled 1S, 2S, and 3S); add 100 ⁇ L of 20mM Tris-HCl, pH8.0 buffer to resuspend the pellet for the remaining pellet, and add 20 ⁇ L of the resuspension solution to 5 ⁇ L Mix well with 5 ⁇ loading buffer and incubate at 95°C for 5 minutes. This is the lysate precipitation sample (three parallel samples are set for the same sample, labeled 1P, 2P, and 3P). The sample was heated at 95°C to 100°C for 5 minutes, cooled, centrifuged, and mixed for inspection.
  • the loading volume is 10 ⁇ L
  • the constant voltage is 90 ⁇ 125V
  • the current upper limit is 200mA
  • the electrophoresis time is 60 ⁇ 90 minutes.
  • the purified protein samples XYD-406-000, XYD-407-000 and XYD-408-000 (20 ⁇ L, 0.1mg/mL) were added dropwise to the treated copper mesh, using 1% uranyl acetate Stain for 1 minute, and then image with JEM-1400 80kv TEM (JEOL, Japan). Transmission electron microscopy results ( Figure 8) show that the three ferritin samples are all nano-particles, and have a uniform and regular cage-like protein structure, with a diameter of about 14-17nm.
  • the instrument Nano ZSE Nanosizer (Malvern, UK) is used to detect the particle size of the sample.
  • the parameter settings are Material as Protern and Dispersant as Tris buffer with pH 8.0 50mM. Select automatic mode scanning.
  • the samples are stored in pH 8.0 50mM Tris buffer, and the protein concentration is 3.78mg/mL.
  • the results are shown in Figures 9-11.
  • the average particle size of the nanoparticles is about 16.57nm (XYD-406-000), 17.04nm (XYD-407-000) and 14.65nm (XYD-408-000).
  • the indirect ELISA method was used to detect the binding activity of the purified protein to the S protein, thereby proving whether there is a target protein with binding activity in the refolding solution.
  • the activity detection results of nanoparticle samples XYD-406-000, XYD-407-000 and XYD-408-000 are shown in Figure 12-14, respectively.
  • the results show that the three constructed proteins all have S protein binding activity and have a concentration Dependent, XYD-408-000 has the highest activity.

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Abstract

The present invention provides an RBD/angiotensin-converting enzyme (ACE2) repressor peptide. The RBD/ACE2 repressor peptide can inhibit the binding of an spike glycoprotein (an S protein) on the surface of the novel corona pneumonia virus (SARS-CoV-2) to ACE2, and has the binding affinity to the S protein of SARS-CoV-2. The present invention further provides a fusion protein containing the RBD/ACE2 repressor peptide and a nanoparticle containing the fusion protein. The RBD/ACE2 repressor peptide, the fusion protein, and the nanoparticle of the present invention can be used for preventing and/or treating diseases caused by Coronaviridae viruses.

Description

铁蛋白-ACE-2短肽纳米药物Ferritin-ACE-2 short peptide nanomedicine 技术领域Technical field
本发明涉及重组融合蛋白治疗药物的领域。具体地,本发明涉及适合用于治疗冠状病毒科病毒引起疾病的重组融合铁蛋白药物。The invention relates to the field of recombinant fusion protein therapeutic drugs. Specifically, the present invention relates to a recombinant fusion ferritin drug suitable for treating diseases caused by coronaviruses of the coronavirus family.
背景技术Background technique
冠状病毒科病毒导致的肺炎,尤其是新冠状肺炎病毒(SARS-CoV-2)导致的新冠状病毒肺炎(Corona Virus Disease 2019,COVID-19)是对人类健康具有重大威胁的突发性疾病。Pneumonia caused by coronaviruses, especially the new coronavirus pneumonia (Corona Virus Disease 2019, COVID-19) caused by the new coronavirus (SARS-CoV-2) is a sudden disease that poses a major threat to human health.
2020年1月7日,中科院武汉病毒所检测出SARS-CoV-2并获得该病毒的全基因组序列。2月3日,其通过对比SARS-CoV-2和实验室早期检测的冠状病毒的部分序列,发现该新型冠状病毒与蝙蝠样本的一株冠状病毒基因序列一致性高达96%。SARS-CoV-2能通过与SARS-CoV相同的方式,即与人ACE2细胞受体结合的方式入侵细胞(A pneumonia outbreak associated with a new coronavirus of probable bat origin,Nature,Peng Zhou et.al,2020)。On January 7, 2020, the Wuhan Institute of Virology of the Chinese Academy of Sciences detected SARS-CoV-2 and obtained the entire genome sequence of the virus. On February 3, by comparing SARS-CoV-2 with the partial sequence of the coronavirus detected in the laboratory early, it found that the sequence of the new coronavirus was as high as 96% with that of a coronavirus in a bat sample. SARS-CoV-2 can invade cells in the same way as SARS-CoV, that is, by binding to the human ACE2 cell receptor (A pneumonia outbreak associated with a new coronavirus of probable bat origin, Nature, Peng Zhou et.al, 2020 ).
截止至2020年4月20日,全球新冠肺炎感染人数超过236万例,累计死亡超过16万例。我国CDC统计的SARS-CoV-2的R0值(基本传染数)高达3.77(Epidemiological and clinical features of the 2019 novel coronavirus outbreak in China,Yang Yang et.al,Medrxiv,2020年2月12日),且由于COVID-19具有较长的无症状潜伏期,以及相当比例的无症状携带者,其造成的庞大患者人群导致医疗系统挤兑,从而引发的经济衰退使得有效治疗性药物的开发迫在眉睫。目前,国内外多个课题组通过结构生物学的方法解析了SARS-CoV-2表面刺突糖蛋白(S蛋白)受体结合结构域(receptor binding domain,RBD)与人血管紧张素转化酶2(Angiotensin-converting enzyme 2,ACE2)蛋白复合物的晶体结构(Structural basis for the recognition of the 2019-nCoV by human ACE2,Renhong Yan et.al,bioRxiv,2020年2月20日;Crystal structure of the 2019-nCoV spike receptor-binding domain bound with the ACE2receptor,Jun Lan et.al,bioRxiv,2020年2月20日),揭示了COVID-19RBD和ACE2的相互作用位点,使得通过阻遏SAR-2-CoV-2/ACE2蛋白之间的相互作用来治疗COVID-19成为可能。通过小分子达到阻断SAR-2-CoV-2/ACE2相关作用的效果有限,而通过合成能够特异结合于SAR-2-CoV-2/ACE2区域的肽段,则可能成为治疗该全球流行性突发疾病的有力手段之一。As of April 20, 2020, the global number of new coronary pneumonia infections has exceeded 2.36 million, and the cumulative deaths have exceeded 160,000. The R0 value (basic number of infections) of SARS-CoV-2 calculated by my country's CDC is as high as 3.77 (Epidemiological and clinical features of the 2019 novel coronavirus outbreak in China, Yang Yang et.al, Medrxiv, February 12, 2020), and Because COVID-19 has a long asymptomatic incubation period and a considerable proportion of asymptomatic carriers, the huge patient population caused by it has led to a run on the medical system, and the economic recession caused by it has made the development of effective therapeutic drugs imminent. At present, many research groups at home and abroad have analyzed SARS-CoV-2 surface spike glycoprotein (S protein) receptor binding domain (RBD) and human angiotensin converting enzyme 2 through structural biology methods. (Angiotensin-converting enzyme 2, ACE2) The crystal structure of the protein complex (Structural basis for the recognition of the 2019-nCoV by human ACE2, Renhong Yan et.al, bioRxiv, February 20, 2020; Crystal structure of the 2019 -nCoV spike receptor-binding domain bound with the ACE2receptor, Jun Lan et.al, bioRxiv, February 20, 2020), revealing the interaction site between COVID-19 RBD and ACE2, which makes it possible to block SAR-2-CoV- It is possible to treat COVID-19 by the interaction between 2/ACE2 protein. The effect of blocking SAR-2-CoV-2/ACE2 related effects through small molecules is limited, and the synthesis of peptides that can specifically bind to the SAR-2-CoV-2/ACE2 region may become a treatment for the global epidemic One of the powerful means for sudden diseases.
MIT的B.L.Pentelute研究组通过分析新型冠状病毒S蛋白受体结合结构域(RBD)与ACE的共晶结构,寻找能够阻断两者结合的肽结合物,获得一个来源于ACE2α1螺旋的肽片段,称为S蛋白结合蛋白1(S-protein binding protein 1,SBP1),SBP1由23个氨基酸组成,其具有非常高的结合亲和力(纳摩尔级别),具备阻遏病毒进入人体细胞的潜在能力,具有治疗前景(The first-in-class peptide binder to the SARS-CoV-2 spike protein,G.Zhang et.al,bioRxi,2020年3月30日)。MIT’s BLPentelute research team analyzed the co-crystal structure of the new coronavirus S protein receptor binding domain (RBD) and ACE, looking for peptide conjugates that can block the combination of the two, and obtained a peptide fragment derived from the ACE2α1 helix. Called S-protein binding protein 1 (SBP1), SBP1 is composed of 23 amino acids. It has a very high binding affinity (nanomolar level) and has the potential to block the virus from entering human cells. It is therapeutic Prospects (The first-in-class peptide binder to the SARS-CoV-2 spike protein, G. Zhang et. al, bioRxi, March 30, 2020).
而在众多抗体治疗方案中,阻遏肽无疑是多样化治疗方案探索中的一股清流,目前相关研究不多。冠状病毒治疗领域仍旧需要探索新的、更有效和安全的治疗形式。而铁蛋白(Ferritin)作为人内源性天然具备的一种物质,其与来自于人ACE2的阻遏性肽段SBP1类似,均来自于人自身,具有免疫原性低的优点。除此之外,铁蛋白分子量约450kDa,具有由24个亚基自组装成球形笼状结构,其不仅可以利用其笼状空腔包载药物(Ferritin-based drug delivery systems:Hybrid nanocarriers for vascular immunotargeting,Makan Khoshnejad et.al,Journal of Controlled Release 282(2018)13-24),还可以将功能性蛋白分子(如抗体、治疗肽)通过融合表达的方式展示在铁蛋白笼外,以达到增强、延长功能性蛋白分子药效半衰期的目的(如申请人在先专利ZL201710412728.9;发表文章“Fenobody:A Ferritin-Displayed Nanobody with High Apparent Affinity and Half-Life Extension,Kelong Fan et.al,Anal.Chem.2018”)。另外,有报道因脂肪组织和某些癌症组织中ACE2表达量比肺部更高,肿瘤和肥胖人群更易感染 COVID-19(Two things about COVID-19 Might Need Attention,Xiaodong Jia et.al,Preprints,2020年2月23日),而铁蛋白独特的尺寸效应(外径12nm),使其能够通过实体瘤组织的高通透性和滞留效应(enhanced permeability and retention effect,EPR效应)靶向ACE2表达量更高的肿瘤/脂肪细胞,因此其具有能够快速缓解肿瘤/肥胖COVID-19患者的症状的潜在价值。Among the many antibody treatment options, repressor peptides are undoubtedly a clear stream in the exploration of diversified treatment options, and there are not many relevant studies at present. The field of coronavirus treatment still needs to explore new, more effective and safe forms of treatment. Ferritin, a substance naturally possessed by human endogenously, is similar to the repressive peptide SBP1 derived from human ACE2. It is both derived from human itself and has the advantage of low immunogenicity. In addition, ferritin has a molecular weight of about 450kDa and has a spherical cage-like structure that is self-assembled by 24 subunits. It can not only use its cage-like cavity to contain drugs (Ferritin-based drug delivery systems: Hybrid nanocarriers for vascular immunotargeting). , Makan Khoshnejad et.al, Journal of Controlled Release 282 (2018) 13-24), functional protein molecules (such as antibodies, therapeutic peptides) can also be displayed outside the ferritin cage through fusion expression to achieve enhancement, The purpose of extending the efficacy half-life of functional protein molecules (such as the applicant’s previous patent ZL201710412728.9; published an article "Fenobody: A Ferritin-Displayed Nanobody with High Apparent Affinity and Half-Life Extension, Kelong Fanet.al, Anal.Chem .2018"). In addition, it has been reported that because the expression of ACE2 in adipose tissue and certain cancer tissues is higher than that in the lungs, tumors and obese people are more susceptible to COVID-19 (Two things about COVID-19 Might Need Attention, Xiaodong Jia et.al, Preprints, February 23, 2020), and the unique size effect of ferritin (outer diameter 12nm) enables it to target ACE2 expression through the high permeability and retention effect of solid tumor tissue (enhanced permeability and retention effect, EPR effect) A higher amount of tumor/adipocytes, so it has the potential value to quickly alleviate the symptoms of tumor/obese COVID-19 patients.
发明内容Summary of the invention
本发明利用铁蛋白作为药物载体的独特优势,将SAR-2-CoV-2的RBD/ACE2阻遏肽段的编码序列连接于铁蛋白单体亚基的N端或C末端(或截断了C端一个α-螺旋的截短序列),从而构建多个铁蛋白与RBD/ACE2阻遏肽段的融合蛋白,所述的融合蛋白能够自组装成为24聚体,从而形成在铁蛋白表面能展示多个阻遏肽段的多价纳米治疗药物,并延长了肽治疗药物的半衰期,达到治疗新型冠状肺炎的目的。The present invention utilizes the unique advantages of ferritin as a drug carrier, and connects the coding sequence of the RBD/ACE2 repressor peptide of SAR-2-CoV-2 to the N-terminus or C-terminus of the ferritin monomer subunit (or the C-terminus is truncated). A truncated sequence of α-helix) to construct multiple fusion proteins of ferritin and RBD/ACE2 repressor peptide. The fusion protein can self-assemble into a 24-mer, which can display multiple ferritin surfaces. Multivalent nano therapeutic drugs that block peptides and prolong the half-life of peptide therapeutics to achieve the purpose of treating new type of coronary pneumonia.
本发明提供了4条RBD/ACE2阻遏肽段,其均来自于人ACE-2蛋白,具有与SAR-2-CoV-2的S蛋白的结合亲和性。The present invention provides four RBD/ACE2 repressor peptides, all of which are derived from human ACE-2 protein and have binding affinity to the S protein of SAR-2-CoV-2.
本发明对铁蛋白单体亚基序列进行Cys点突变,能够减少聚集体生成、提高蛋白可溶性表达和复性效率。The invention carries out Cys point mutations on the ferritin monomer subunit sequence, which can reduce the generation of aggregates and improve the soluble expression and renaturation efficiency of the protein.
本发明提供了铁蛋白的单体亚基的截短突变体,使得阻遏肽段连接于铁蛋白C端时能够展示在铁蛋白外表面。The present invention provides a truncated mutant of the monomer subunit of ferritin, so that the repressor peptide can be displayed on the outer surface of ferritin when it is connected to the C-terminus of ferritin.
具体来说,本发明提出了如下技术方案:Specifically, the present invention proposes the following technical solutions:
在一方面,本发明提供了一种RBD/ACE2阻遏肽。In one aspect, the present invention provides a RBD/ACE2 repressor peptide.
在一方面,本发明提供了一种融合蛋白。In one aspect, the invention provides a fusion protein.
在一方面,本发明提供了一种包含融合蛋白的纳米颗粒。In one aspect, the present invention provides a nanoparticle containing a fusion protein.
在一方面,本发明提供了一种用于生产前述RBD/ACE2阻遏肽、融合蛋白或纳米颗粒的方法。In one aspect, the present invention provides a method for producing the aforementioned RBD/ACE2 repressor peptide, fusion protein or nanoparticle.
在一方面,本发明提供了一种融合蛋白药物组合物。In one aspect, the present invention provides a fusion protein pharmaceutical composition.
在一方面,本发明提供了一种SARS-CoV-2表面刺突糖蛋白(S蛋白)拮抗剂。In one aspect, the present invention provides a SARS-CoV-2 surface spike glycoprotein (S protein) antagonist.
在一方面,本发明提供了一种生成针对冠状病毒科的病毒的治疗药物的方法。In one aspect, the present invention provides a method of generating therapeutic drugs against viruses of the coronavirus family.
在一方面,本发明提供了一种核酸分子。In one aspect, the invention provides a nucleic acid molecule.
在一方面,本发明提供了一种表达构建体。In one aspect, the invention provides an expression construct.
在一方面,本发明提供了一种重组细胞。In one aspect, the present invention provides a recombinant cell.
在一方面,本发明提供了前述RBD/ACE2阻遏肽、融合蛋白、纳米颗粒、药物组合物或SARS-CoV-2表面刺突糖蛋白(S蛋白)拮抗剂、核酸分子、表达构建体、重组细胞在制备S蛋白抑制剂、ACE2与S蛋白结合的竞争性抑制剂中的用途、或在制备预防和/或治疗冠状病毒科病毒感染或由所述冠状病毒科病毒感染引起的疾病的药物中的用途。In one aspect, the present invention provides the aforementioned RBD/ACE2 repressor peptide, fusion protein, nanoparticle, pharmaceutical composition or SARS-CoV-2 surface spike glycoprotein (S protein) antagonist, nucleic acid molecule, expression construct, recombinant Use of cells in the preparation of S protein inhibitors, competitive inhibitors of the binding of ACE2 and S protein, or in the preparation of drugs for preventing and/or treating coronavirus infections or diseases caused by the coronavirus infections the use of.
与现有技术相比,本发明具有如下有益效果:Compared with the prior art, the present invention has the following beneficial effects:
(1)本发明构建的铁蛋白-阻遏肽融合蛋白能够自组装形成笼状蛋白,多个阻遏肽段负载于铁蛋白纳米颗粒外表面,能够与冠状病毒S蛋白结合从而阻止冠状病毒进入人体细胞,达到预防冠状病毒感染和治疗感染的效果。与单纯的阻遏小分子肽相比,本发明的产品一方面通过融合铁蛋白亚基从而延长了阻遏肽的治疗半衰期;一方面,一个铁蛋白分子上能够负载24个阻遏肽,提供了多价的治疗方案,能大大提高结合冠状病毒的能力;再一方面,铁蛋白的EPR效应可使得该治疗药物相对富集在ACE2高表达的组织,从而有针对性的保护一些容易被冠状病毒感染的器官;再一方面,本发明构建的铁蛋白-阻遏肽融合蛋白的两个组成成分均来自于人体自身的蛋白,因此免疫原性低。(1) The ferritin-repressor peptide fusion protein constructed in the present invention can self-assemble to form a cage protein, and multiple repressor peptides are loaded on the outer surface of ferritin nanoparticles, which can bind to the coronavirus S protein to prevent the coronavirus from entering human cells , To achieve the effect of prevention of coronavirus infection and treatment of infection. Compared with simple suppressor peptides, the product of the present invention prolongs the therapeutic half-life of suppressor peptides by fusing ferritin subunits on the one hand; on the other hand, 24 suppressor peptides can be loaded on a ferritin molecule, providing multivalence The treatment plan can greatly improve the ability to bind to the coronavirus; on the other hand, the EPR effect of ferritin can make the therapeutic drug relatively enriched in the tissues with high expression of ACE2, thereby targeted protection of some vulnerable to coronavirus infection Organ; On the other hand, the two components of the ferritin-repressor peptide fusion protein constructed in the present invention are derived from the human body's own protein, so the immunogenicity is low.
(2)本发明用大肠杆菌表达系统获得的融合蛋白,能够简单、高产量的自组装形成具有结合活性的笼状蛋白,制备方法简单,易操作,具有高成药价值和产业化价值。(2) The fusion protein obtained by the E. coli expression system of the present invention can self-assemble with simple and high yield to form a cage protein with binding activity. The preparation method is simple, easy to operate, and has high pharmaceutical value and industrialization value.
(3)本发明在一些技术方案中,将野生型铁蛋白中,具有活性巯基反应位点的Cys突变,从而减少活性巯基在体内发生反应产生副作用的可能性,同时也减少了药物制备过程中活性巯基发生反应的可能性,有利于制药品控。(3) In some technical schemes of the present invention, the Cys with active sulfhydryl reaction site in wild-type ferritin is mutated, thereby reducing the possibility of side effects caused by the active sulfhydryl group reaction in the body, and also reducing the drug preparation process. The possibility of reactive sulfhydryl groups is conducive to drug control.
附图说明Description of the drawings
为了更清楚地说明本发明的技术方案,下面对所需要使用的附图作简单地介绍,显而易见地,下面描述中的附图仅仅是本发明中记载的一些实施例,对于本领域普通技术人员来讲,在不付出创造性劳动的前提下,还可以根据这些附图获得其它的附图。In order to explain the technical solution of the present invention more clearly, the following briefly introduces the accompanying drawings that need to be used. Obviously, the drawings in the following description are only some embodiments recorded in the present invention, which are for ordinary technology in the field. As far as personnel are concerned, they can also obtain other drawings based on these drawings without creative work.
图1示出了质粒pET-22b(+)的图谱。Figure 1 shows a map of plasmid pET-22b(+).
图2示出了重组质粒pET-22b-XYD-406-000的图谱。Figure 2 shows a map of the recombinant plasmid pET-22b-XYD-406-000.
图3示出了重组质粒pET-22b-XYD-407-000的图谱。Figure 3 shows a map of the recombinant plasmid pET-22b-XYD-407-000.
图4示出了重组质粒pET-22b-XYD-408-000的图谱。Figure 4 shows a map of the recombinant plasmid pET-22b-XYD-408-000.
图5示出了重组质粒pET-22b-XYD-406-000、pET-22b-XYD-407-000和pET-22b-XYD-408-000的酶切鉴定图。Figure 5 shows the restriction map of recombinant plasmids pET-22b-XYD-406-000, pET-22b-XYD-407-000 and pET-22b-XYD-408-000.
图6示出了分别用重组质粒pET-22b-XYD-406-000、pET-22b-XYD-407-000和pET-22b-XYD-408-000转化E.coli BL21(DE3)所获得的重组菌株406、407和408的生长情况。Figure 6 shows the recombinant plasmids pET-22b-XYD-406-000, pET-22b-XYD-407-000 and pET-22b-XYD-408-000 transformed E. coli BL21(DE3). The growth of strains 406, 407 and 408.
图7示出了菌株406、407和408裂解后离心获得的上清液和沉淀中蛋白的情况,其中,S表示上清,P表示沉淀,1-3分别为菌株406、407或408的三个平行样本的编号。Figure 7 shows the protein in the supernatant and precipitate obtained by centrifugation after lysis of strains 406, 407, and 408, where S represents the supernatant, P represents the precipitate, and 1-3 are the three of strains 406, 407, or 408, respectively. The number of a parallel sample.
图8示出了纳米颗粒样品XYD-406-000、XYD-407-000和XYD-408-000的透射电镜结果。Figure 8 shows the TEM results of nanoparticle samples XYD-406-000, XYD-407-000 and XYD-408-000.
图9示出了纳米颗粒样品XYD-406-000的平均粒径。Figure 9 shows the average particle size of nanoparticle sample XYD-406-000.
图10示出了纳米颗粒样品XYD-407-000的平均粒径。Figure 10 shows the average particle size of nanoparticle sample XYD-407-000.
图11示出了纳米颗粒样品XYD-408-000的平均粒径。Figure 11 shows the average particle size of nanoparticle sample XYD-408-000.
图12示出了纳米颗粒样品XYD-406-000与S-RBD的结合活性的检测结果。Figure 12 shows the detection result of the binding activity of nanoparticle sample XYD-406-000 and S-RBD.
图13示出了纳米颗粒样品XYD-407-000与S-RBD的结合活性的检测结果。Figure 13 shows the detection result of the binding activity of nanoparticle sample XYD-407-000 and S-RBD.
图14示出了纳米颗粒样品XYD-408-000与S-RBD的结合活性的检测结果。Figure 14 shows the detection results of the binding activity of nanoparticle sample XYD-408-000 and S-RBD.
具体实施方式detailed description
在本发明中,除非另有说明,否则本文中使用的科学和技术名词具有本领域技术人员所通常理解的含义。并且,本文中所用的蛋白质和核酸化学、分子生物学、细胞和组织培养、微生物学、免疫学相关术语和实验室操作步骤均为相应领域内广泛使用的术语和常规步骤。同时,为了更好地理解本发明,下面提供相关术语的定义和解释。In the present invention, unless otherwise specified, the scientific and technical terms used herein have the meanings commonly understood by those skilled in the art. In addition, protein and nucleic acid chemistry, molecular biology, cell and tissue culture, microbiology, immunology related terms and laboratory procedures used herein are all terms and routine procedures widely used in the corresponding fields. At the same time, in order to better understand the present invention, definitions and explanations of related terms are provided below.
如本文所用的,术语“RBD/ACE2阻遏肽段”指能够阻遏新冠状肺炎病毒(SARS-CoV-2)表面刺突糖蛋白(S蛋白)与血管紧张素转化酶2(ACE-2)结合的肽段,其通过与新冠状肺炎病毒(SARS-CoV-2)表面刺突糖蛋白(S蛋白)受体结合结构域(RBD)结合,阻止新冠状肺炎病毒(SARS-CoV-2)感染人体或减少已感染者的症状。As used herein, the term "RBD/ACE2 repressor peptide" refers to the ability to inhibit the binding of new coronavirus (SARS-CoV-2) surface spike glycoprotein (S protein) to angiotensin converting enzyme 2 (ACE-2) The peptide fragment of the new coronavirus (SARS-CoV-2) surface spike glycoprotein (S protein) receptor binding domain (RBD) to prevent the new coronavirus (SARS-CoV-2) infection The human body may reduce the symptoms of those who have been infected.
如本文所用的,术语“纳米颗粒”指从自组装的单体亚基蛋白形成的颗粒,其可以是中空的,也可以是实心结构。例如,铁蛋白亚基蛋白自组装成铁蛋白纳米颗粒,中间有空腔。本发明的纳米颗粒的形状通常为球状或笼状,尽管其他形状,例如杆状,立方体,片状,长圆形,卵形等也可用于实施本发明。As used herein, the term "nanoparticle" refers to particles formed from self-assembled monomeric subunit proteins, which can be hollow or solid structures. For example, ferritin subunit proteins self-assemble into ferritin nanoparticles with a cavity in the middle. The shape of the nanoparticles of the present invention is generally spherical or cage-like, although other shapes, such as rod-shaped, cubic, plate-shaped, oblong, oval, etc., can also be used in the practice of the present invention.
如本文所用的,术语“自组装”蛋白质是指能够不借助特定诱导剂,在表达的同时通过规则排列形成多聚体而形成纳米颗粒的蛋白质。As used herein, the term "self-assembling" protein refers to a protein that can form nanoparticles by regularly arranging to form multimers while being expressed without the aid of a specific inducer.
如本文所用的,术语“冠状病毒(Coronavirus)”属于冠状病毒科,冠状病毒属,可以感染哺乳动物和禽类,引起呼吸系统、消化和中枢神经的各种疾病。根据基因组和血清学差异可以将冠状病毒分成四个不同的属:α、β、γ和δ,目前只有α和β属冠状病毒感染人类。截 至目前已鉴定出来自两个属(α和β)的6种人冠状病毒(HCoV),α属冠状病毒包括NL63和229E,β属冠状病毒包括OC43、HKU1、急性呼吸系统综合征冠状病毒(SARS-CoV)、中东呼吸综合征冠状病毒(MERS-CoV)和新型冠状肺炎病毒(SARS-CoV-2)。As used herein, the term "Coronavirus" belongs to the Coronavirus family, a genus of Coronavirus, which can infect mammals and birds and cause various diseases of the respiratory system, digestion, and central nervous system. According to genomic and serological differences, coronaviruses can be divided into four different genera: α, β, γ, and δ. At present, only α and β are coronaviruses that infect humans. Up to now, six human coronaviruses (HCoV) from two genera (α and β) have been identified. α genus coronaviruses include NL63 and 229E, and β genus coronaviruses include OC43, HKU1, and acute respiratory syndrome coronavirus ( SARS-CoV), Middle East Respiratory Syndrome Coronavirus (MERS-CoV) and Novel Coronavirus (SARS-CoV-2).
如本文所用的,术语“铁蛋白”是指由蛋白外壳和铁内核两部分构成的储铁结构。天然情况下,铁蛋白的蛋白外壳是通常由24个亚基自组装形成的笼状蛋白结构(外径约12nm,内径约8nm),而铁内核的主要成分为水铁矿。不含铁内核的铁蛋白的蛋白外壳也称为“去铁蛋白”。本文所述“铁蛋白”包括真核生物铁蛋白和原核生物铁蛋白,优选真核生物铁蛋白,更优选哺乳动物铁蛋白,例如人铁蛋白。真核生物铁蛋白通常包括重链铁蛋白单体亚基(H,21kDa)和轻链铁蛋白单体亚基(L,19kDa)。H亚基负责Fe(II)氧化成Fe(III)并包括催化性铁氧化酶位点,而L亚基在铁成核中发挥作用。H和L亚基共同组装成24聚体的杂聚体铁蛋白。在机体不同组织和器官中,铁蛋白分子中含有H和L亚基的比例有所不同。然而,通过重组方式,也可以获得仅由H亚基组装成的“H铁蛋白”或仅由L亚基组装成的“L铁蛋白”。As used herein, the term "ferritin" refers to an iron storage structure composed of two parts: a protein shell and an iron core. In nature, the protein shell of ferritin is a clathrin structure (about 12nm in outer diameter and about 8nm in inner diameter) formed by self-assembly of 24 subunits, and the main component of the iron core is ferrihydrite. The protein shell of ferritin without an iron core is also called "deferritin". "Ferritin" as used herein includes eukaryotic ferritin and prokaryotic ferritin, preferably eukaryotic ferritin, more preferably mammalian ferritin, such as human ferritin. Eukaryotic ferritin usually includes a heavy chain ferritin monomer subunit (H, 21kDa) and a light chain ferritin monomer subunit (L, 19kDa). The H subunit is responsible for the oxidation of Fe(II) to Fe(III) and includes catalytic iron oxidase sites, while the L subunit plays a role in iron nucleation. The H and L subunits assemble together into a 24-mer hybrid ferritin. In different tissues and organs of the body, the ratio of H and L subunits in ferritin molecules is different. However, through recombination, it is also possible to obtain "H ferritin" assembled from only H subunits or "L ferritin" assembled from L subunits only.
如本文所用的,术语“人重链铁蛋白”(下文缩写为“人HFn”)是指仅由人铁蛋白的重链单体亚基组装成的铁蛋白。“人轻链铁蛋白”(下文缩写为“人LFn”)是指仅由人铁蛋白的轻链单体亚基组装成的铁蛋白。As used herein, the term "human heavy chain ferritin" (hereinafter abbreviated as "human HFn") refers to ferritin assembled from only the heavy chain monomer subunits of human ferritin. "Human light chain ferritin" (hereinafter abbreviated as "human LFn") refers to ferritin assembled only from the light chain monomer subunits of human ferritin.
如本文所用的,术语“融合蛋白”是指由上述一种或多种分子组成的天然或合成分子,其中具有不同特异性的两种或多种基于肽或蛋白质(包括糖蛋白)的分子任选的通过化学的或基于氨基酸的接头分子融合在一起。该连接可通过C-N融合或N-C融合(以5′→3′方向)而实现。As used herein, the term "fusion protein" refers to a natural or synthetic molecule composed of one or more of the above-mentioned molecules, in which two or more peptide or protein (including glycoprotein)-based molecules with different specificities The selected ones are fused together by chemical or amino acid-based linker molecules. The connection can be achieved by C-N fusion or N-C fusion (in the 5'→3' direction).
表1缩略语表Table 1 Abbreviations
英文缩写English abbreviations 中文全称Chinese name 英文全称English full name
人HFnHuman HFn 人重链铁蛋白Human heavy chain ferritin Human Heavy Chain-FerritinHuman Heavy Chain-Ferritin
人LFnHuman LFn 人轻链铁蛋白Human light chain ferritin Human Light Chain-FerritinHuman Light Chain-Ferritin
SARS-CoV-2SARS-CoV-2 新型冠状病毒Novel Coronavirus Severe Acute Respiratory Syndrome coronavirus 2Severe Acute Respiratory Syndrome Coronavirus 2
COVID-19COVID-19 新冠状病毒肺炎New coronavirus pneumonia Corona Virus Disease-19Corona Virus Disease-19
S-RBMS-RBM S蛋白受体结合基序S protein receptor binding motif S glycoprotein receptor binding motifS glycoprotein receptor binding motif
S-RBDS-RBD S蛋白受体结合结构域S protein receptor binding domain S glycoprotein receptor binding DomainS glycoprotein receptor binding Domain
ACE2ACE2 血管紧张素转化酶2 Angiotensin Converting Enzyme 2 Angiotensin converting enzyme 2 Angiotensin converting enzyme 2
E.coliE.coli 大肠杆菌Escherichia coli Escherichia coliEscherichia coli
在一方面,本发明提供了一种RBD/ACE2阻遏肽,其中所述RBD/ACE2阻遏肽包含与SEQ ID NO.1、2、3或4所示氨基酸序列具有80%或以上同一性的氨基酸序列,优选具有85%、90%、95%、96%、97%、98%、99%以上同一性的氨基酸序列,更优选具有98%或99%以上同一性的氨基酸序列;更优选地,所述RBD/ACE2阻遏肽的氨基酸序列如SEQ ID NO.1、2、3或4所示。In one aspect, the present invention provides an RBD/ACE2 repressor peptide, wherein the RBD/ACE2 repressor peptide comprises an amino acid having 80% or more identity with the amino acid sequence shown in SEQ ID NO. 1, 2, 3, or 4. The sequence is preferably an amino acid sequence having 85%, 90%, 95%, 96%, 97%, 98%, 99% or more identity, more preferably an amino acid sequence having 98% or more than 99% identity; more preferably, The amino acid sequence of the RBD/ACE2 repressor peptide is shown in SEQ ID NO. 1, 2, 3 or 4.
在一方面,本发明提供了一种融合蛋白,其中所述融合蛋白包含所述的RBD/ACE2阻遏肽。In one aspect, the present invention provides a fusion protein, wherein the fusion protein comprises the RBD/ACE2 repressor peptide.
在具体实施方案中,所述融合蛋白还包含自组装的、单体亚基的至少一部分。In a specific embodiment, the fusion protein further comprises at least a part of a self-assembled, monomeric subunit.
在一方面,本发明提供了一种包含融合蛋白的纳米颗粒,其中所述融合蛋白包含RBD/ACE2阻遏肽以及自组装的、单体亚基的至少一部分,且其中所述纳米颗粒在其表面上 展示所述RBD/ACE2阻遏肽,所述RBD/ACE2阻遏肽能够阻遏新冠状肺炎病毒(SARS-CoV-2)表面刺突糖蛋白(S蛋白)与血管紧张素转化酶2(ACE-2)结合。In one aspect, the present invention provides a nanoparticle comprising a fusion protein, wherein the fusion protein comprises an RBD/ACE2 repressor peptide and at least a part of a self-assembled, monomeric subunit, and wherein the nanoparticle is on its surface The RBD/ACE2 repressor peptide is shown above. The RBD/ACE2 repressor peptide can suppress the surface spike glycoprotein (S protein) of the new coronavirus (SARS-CoV-2) and angiotensin converting enzyme 2 (ACE-2). ) Combine.
根据本发明,本发明的自组装的单体亚基蛋白、单体亚基蛋白、自组装的蛋白质、自组装的亚基蛋白等是全长、单体多肽,或者其任何部分或变体,其能够引导单体自组装亚基蛋白自组装为纳米颗粒。此类蛋白质是本领域技术人员已知的。可用于制备本发明纳米颗粒的自组装蛋白的实例包括但不限于,铁蛋白单体亚基、单体encapsulin蛋白、单体03-33蛋白、单体硫加氧酶还原酶(SOR)蛋白、单体2,4-二氧四氢蝶啶合酶(lumazine synthase)(LS)蛋白、单体丙酮酸脱氢酶复合物(PDC)蛋白、单体氢硫辛酰胺乙酰转移酶(E2)蛋白以及甲病毒(如基孔肯雅病毒)的包膜(Env)蛋白。According to the present invention, the self-assembled monomeric subunit protein, monomeric subunit protein, self-assembled protein, self-assembled subunit protein, etc. of the present invention are full-length, monomeric polypeptides, or any part or variant thereof, It can guide the self-assembly of monomer self-assembled subunit proteins into nanoparticles. Such proteins are known to those skilled in the art. Examples of self-assembling proteins that can be used to prepare the nanoparticles of the present invention include, but are not limited to, ferritin monomer subunits, monomeric encapsulin proteins, monomeric 03-33 proteins, monomeric thiooxygenase reductase (SOR) proteins, monomers Body 2,4-Dioxytetrahydropteridine synthase (LS) protein, monomeric pyruvate dehydrogenase complex (PDC) protein, monomeric hydrolipoamide acetyltransferase (E2) protein, and The envelope (Env) protein of alphavirus (such as Chikungunya virus).
在具体实施方案中,所述铁蛋白单体亚基是来源于哺乳动物来源的铁蛋白、两栖类动物来源的铁蛋白、细菌来源的铁蛋白或植物来源的铁蛋白中的任意一种或至少两种组合的铁蛋白单体亚基,优选为哺乳动物来源或细菌来源的铁蛋白单体亚基。In a specific embodiment, the ferritin monomer subunit is any one or at least one of ferritin derived from mammalian origin, ferritin derived from amphibian, ferritin derived from bacteria or ferritin derived from plant origin. The two combined ferritin monomer subunits are preferably mammalian or bacterial ferritin monomer subunits.
在具体实施方案中,所述哺乳动物来源的铁蛋白包括人源性铁蛋白、鼠源性铁蛋白或马脾脏铁蛋白中的任意一种或至少两种的组合。In a specific embodiment, the mammalian-derived ferritin includes any one or a combination of at least two of human-derived ferritin, murine-derived ferritin, or horse spleen ferritin.
在具体实施方案中,所述细菌来源的铁蛋白包括幽门螺杆菌铁蛋白、大肠杆菌铁蛋白或激烈火球菌铁蛋白。In a specific embodiment, the bacterial-derived ferritin includes Helicobacter pylori ferritin, Escherichia coli ferritin, or Pyrococcus furiosus ferritin.
在具体实施方案中,所述铁蛋白的来源包括天然提取产物、人工合成产物或基因工程技术产物中的任一种或至少两种的组合。In a specific embodiment, the source of the ferritin includes any one or a combination of at least two of natural extraction products, artificial synthesis products, or genetic engineering technology products.
在具体实施方案中,所述铁蛋白单体亚基包括突变氨基酸序列;优选地,所述突变氨基酸为半胱氨酸(Cys);更优选地,所述半胱氨酸突变为谷氨酸(Glu)、丝氨酸(Ser)或丙氨酸(Ala)。In a specific embodiment, the ferritin monomer subunit includes a mutated amino acid sequence; preferably, the mutated amino acid is cysteine (Cys); more preferably, the cysteine is mutated to glutamic acid (Glu), serine (Ser) or alanine (Ala).
在具体实施方案中,所述铁蛋白单体亚基是截短突变体;优选地,所述截短突变体是重链铁蛋白单体亚基(H)C端的α-螺旋截短突变体;优选地,所述截短突变体是轻链铁蛋白单体亚基(L)C端的ε螺旋截短突变体。In a specific embodiment, the ferritin monomer subunit is a truncation mutant; preferably, the truncation mutant is an α-helical truncation mutant at the C-terminus of the heavy chain ferritin monomer subunit (H) Preferably, the truncation mutant is an epsilon helix truncation mutant at the C-terminus of the light chain ferritin monomer subunit (L).
在具体实施方案中,所述纳米颗粒包含至少一个所述的铁蛋白单体亚基,优选地,所述铁蛋白单体亚基选自重链铁蛋白单体亚基(H)或轻链铁蛋白单体亚基(L);优选地,所述重链铁蛋白单体亚基(H)和/或轻链铁蛋白单体亚基(L)形成纳米颗粒,更优选地,所述纳米颗粒包含24个铁蛋白单体亚基,其中重链铁蛋白单体亚基(H)与轻链铁蛋白单体亚基(L)的比例为0:24-24:0;优选地,所述重链铁蛋白单体亚基(H)是人重链铁蛋白单体亚基(H);优选地,所述轻链铁蛋白单体亚基(L)是人轻链铁蛋白单体亚基(L)。In a specific embodiment, the nanoparticle comprises at least one ferritin monomer subunit, preferably, the ferritin monomer subunit is selected from heavy chain ferritin monomer subunit (H) or light chain iron Protein monomer subunit (L); preferably, the heavy chain ferritin monomer subunit (H) and/or the light chain ferritin monomer subunit (L) form a nanoparticle, more preferably, the nano The particle contains 24 ferritin monomer subunits, wherein the ratio of heavy chain ferritin monomer subunits (H) to light chain ferritin monomer subunits (L) is 0:24-24:0; preferably, The heavy chain ferritin monomer subunit (H) is a human heavy chain ferritin monomer subunit (H); preferably, the light chain ferritin monomer subunit (L) is a human light chain ferritin monomer Subunit (L).
在具体实施方案中,所述重链铁蛋白单体亚基(H)包含与SEQ ID NO.5、6、7或8所示氨基酸序列具有80%或以上同一性的氨基酸序列,优选具有85%、90%、95%、96%、97%、98%、99%以上同一性的氨基酸序列,更优选具有98%或99%以上同一性的氨基酸序列;更优选地,所述重链铁蛋白亚基的氨基酸序列如SEQ ID NO.5、6、7或8所示。In a specific embodiment, the heavy chain ferritin monomer subunit (H) comprises an amino acid sequence having 80% or more identity with the amino acid sequence shown in SEQ ID NO. 5, 6, 7, or 8, preferably having 85 %, 90%, 95%, 96%, 97%, 98%, 99% or more identical amino acid sequences, more preferably 98% or more 99% identical amino acid sequences; more preferably, the heavy chain iron The amino acid sequence of the protein subunit is shown in SEQ ID NO. 5, 6, 7 or 8.
在具体实施方案中,所述融合蛋白包含所述的RBD/ACE2阻遏肽和所述重链铁蛋白单体亚基(H)。优选地,所述融合蛋白包含与SEQ ID NO.9、10、11、12、13、14、15、16、17、18或19所示氨基酸序列具有80%或以上同一性的氨基酸序列,优选具有85%、90%、95%、96%、97%、98%、99%以上同一性的氨基酸序列,更优选具有98%或99%以上同一性的氨基酸序列;更优选地,所述融合蛋白的氨基酸序列如SEQ ID NO.9、10、11、12、13、14、15、16、17、18或19所示。In a specific embodiment, the fusion protein comprises the RBD/ACE2 repressor peptide and the heavy chain ferritin monomer subunit (H). Preferably, the fusion protein comprises an amino acid sequence having 80% or more identity with the amino acid sequence shown in SEQ ID NO. 9, 10, 11, 12, 13, 14, 15, 16, 17, 18 or 19. An amino acid sequence having 85%, 90%, 95%, 96%, 97%, 98%, 99% or more identity, more preferably an amino acid sequence having 98% or more than 99% identity; more preferably, the fusion The amino acid sequence of the protein is shown in SEQ ID NO. 9, 10, 11, 12, 13, 14, 15, 16, 17, 18 or 19.
在具体实施方案中,所述轻链铁蛋白亚基(L)包含与SEQ ID NO.20、21、22或23所示氨基酸序列具有80%或以上同一性的氨基酸序列,优选具有85%、90%、95%、96%、97%、98%、99%以上同一性的氨基酸序列,更优选具有98%或99%以上同一性的氨基酸序列;更优选地,所述的轻链铁蛋白亚基的氨基酸序列如SEQ ID NO.20、21、22或23所示。In a specific embodiment, the light chain ferritin subunit (L) comprises an amino acid sequence having 80% or more identity with the amino acid sequence shown in SEQ ID NO. 20, 21, 22 or 23, preferably having 85%, An amino acid sequence with 90%, 95%, 96%, 97%, 98%, 99% or more identity, more preferably an amino acid sequence with 98% or more than 99% identity; more preferably, the light chain ferritin The amino acid sequence of the subunit is shown in SEQ ID NO. 20, 21, 22 or 23.
在具体实施方案中,所述融合蛋白包含所述的RBD/ACE2阻遏肽和所述轻链铁蛋白亚基(L)。优选地,所述的融合蛋白包含与SEQ ID NO.24、25、26、27、28、29、30、31、32、33或34所示氨基酸序列具有80%或以上同一性的氨基酸序列,优选具有85%、90%、95%、96%、97%、98%、99%以上同一性的氨基酸序列,更优选具有98%或99%以上同一性的氨基酸序列;更优选地,所述的融合蛋白的氨基酸序列如SEQ ID NO.24、25、26、27、28、29、30、31、32、33或34所示。In a specific embodiment, the fusion protein comprises the RBD/ACE2 repressor peptide and the light chain ferritin subunit (L). Preferably, the fusion protein comprises an amino acid sequence having 80% or more identity with the amino acid sequence shown in SEQ ID NO. 24, 25, 26, 27, 28, 29, 30, 31, 32, 33 or 34, Preferably, an amino acid sequence having 85%, 90%, 95%, 96%, 97%, 98%, 99% or more identity, more preferably an amino acid sequence having 98% or more than 99% identity; more preferably, the The amino acid sequence of the fusion protein is shown in SEQ ID NO. 24, 25, 26, 27, 28, 29, 30, 31, 32, 33 or 34.
在一方面,本发明提供了一种用于生产前述RBD/ACE2阻遏肽、融合蛋白或纳米颗粒的方法,所述方法包括将编码所述RBD/ACE2阻遏肽或融合蛋白的一个或多个核酸分子导入细胞中,并在适合于表达所述RBD/ACE2阻遏肽、融合蛋白或形成纳米颗粒的条件下培养所述细胞。In one aspect, the present invention provides a method for producing the aforementioned RBD/ACE2 repressor peptide, fusion protein or nanoparticle, the method comprising combining one or more nucleic acids encoding the RBD/ACE2 repressor peptide or fusion protein The molecule is introduced into the cell, and the cell is cultured under conditions suitable for expression of the RBD/ACE2 repressor peptide, fusion protein, or formation of nanoparticles.
在一方面,本发明提供了一种药物组合物,其包含前述RBD/ACE2阻遏肽、融合蛋白或纳米颗粒。In one aspect, the present invention provides a pharmaceutical composition comprising the aforementioned RBD/ACE2 repressor peptide, fusion protein or nanoparticle.
在具体实施方案中,所述的药物组合物是针对冠状病毒科病毒的药物;优选地,所述冠状病毒科的病毒选自新型冠状肺炎病毒(SARS-CoV-2)、SARS-CoV、MERS-Cov、229E、NL63、OC43和HKU1。In a specific embodiment, the pharmaceutical composition is a drug for coronaviruses of the coronavirus family; preferably, the viruses of the coronavirus family are selected from the group consisting of new coronavirus pneumonia virus (SARS-CoV-2), SARS-CoV, and MERS. -Cov, 229E, NL63, OC43 and HKU1.
在具体实施方案中,所述药物组合物还包含另一种治疗剂;所述另一种治疗剂选自免疫治疗剂或其他抑制冠状病毒科的病毒的药物。In a specific embodiment, the pharmaceutical composition further comprises another therapeutic agent; the another therapeutic agent is selected from immunotherapeutic agents or other drugs that inhibit viruses of the coronavirus family.
在具体实施方案中,所述冠状病毒科的病毒为新型冠状肺炎病毒(SARS-CoV-2);所述的药物组合物是针对新型冠状肺炎病毒(SARS-CoV-2)的药物。In a specific embodiment, the virus of the coronavirus family is a new type of coronavirus (SARS-CoV-2); the pharmaceutical composition is a drug for the new type of coronavirus (SARS-CoV-2).
在一方面,本发明提供了一种SARS-CoV-2表面刺突糖蛋白(S蛋白)拮抗剂,其包含前述RBD/ACE2阻遏肽、融合蛋白或纳米颗粒,所述阻遏肽、融合蛋白或纳米颗粒通过结合SARS-CoV-2表面刺突糖蛋白(S蛋白)而发挥作用。In one aspect, the present invention provides a SARS-CoV-2 surface spike glycoprotein (S protein) antagonist, which comprises the aforementioned RBD/ACE2 repressor peptide, fusion protein or nanoparticle, said repressor peptide, fusion protein or Nanoparticles work by binding to SARS-CoV-2 surface spike glycoprotein (S protein).
在一方面,本发明提供了一种生成针对冠状病毒科的病毒的治疗药物的方法,该方法包括:In one aspect, the present invention provides a method of generating a therapeutic drug for viruses of the coronavirus family, the method comprising:
a)表达前述RBD/ACE2阻遏肽或融合蛋白、或形成纳米颗粒;和a) express the aforementioned RBD/ACE2 repressor peptide or fusion protein, or form nanoparticles; and
b)回收所述的RBD/ACE2阻遏肽、融合蛋白或纳米颗粒。b) Recover the RBD/ACE2 repressor peptide, fusion protein or nanoparticle.
在一方面,本发明提供了一种核酸分子,其包含编码前述RBD/ACE2阻遏肽或融合蛋白或纳米颗粒的核酸序列。In one aspect, the present invention provides a nucleic acid molecule comprising a nucleic acid sequence encoding the aforementioned RBD/ACE2 repressor peptide or fusion protein or nanoparticle.
在具体实施方案中,所述核酸序列包含与SEQ ID NO.35、36或37所示核苷酸序列具有80%或以上同一性的核苷酸序列,优选具有85%、90%、95%、96%、97%、98%、99%以上同一性的核苷酸序列,更优选具有98%或99%以上同一性的核苷酸序列;更优选地,所述核酸序列如SEQ ID NO.35、36或37所示。In a specific embodiment, the nucleic acid sequence comprises a nucleotide sequence having 80% or more identity with the nucleotide sequence shown in SEQ ID NO. 35, 36 or 37, preferably 85%, 90%, 95% , 96%, 97%, 98%, 99% or more identical nucleotide sequences, more preferably 98% or more 99% identical nucleotide sequences; more preferably, the nucleic acid sequence is as SEQ ID NO As shown in .35, 36 or 37.
在具体实施方案中,所述核酸分子是密码子优化的核酸分子。In a specific embodiment, the nucleic acid molecule is a codon optimized nucleic acid molecule.
在一方面,本发明提供了一种表达构建体,其包含前述核酸分子。In one aspect, the present invention provides an expression construct comprising the aforementioned nucleic acid molecule.
在一方面,本发明提供了一种重组细胞,其包含前述核酸分子或表达构建体。In one aspect, the present invention provides a recombinant cell comprising the aforementioned nucleic acid molecule or expression construct.
在一方面,本发明提供了前述RBD/ACE2阻遏肽、融合蛋白、纳米颗粒、药物组合物、SARS-CoV-2表面刺突糖蛋白(S蛋白)拮抗剂、治疗药物、核酸分子、表达构建体、重组细胞在制备S蛋白抑制剂、ACE2与S蛋白结合的竞争性抑制剂中的用途、或在制备预防和/或治疗冠状病毒科病毒感染或由所述冠状病毒科病毒感染引起的疾病的药物中的用途;优选地,所述冠状病毒科病毒感染引起的疾病是由新型冠状病毒感染引起的疾病,尤其是新型冠状病毒肺炎。In one aspect, the present invention provides the aforementioned RBD/ACE2 repressor peptides, fusion proteins, nanoparticles, pharmaceutical compositions, SARS-CoV-2 surface spike glycoprotein (S protein) antagonists, therapeutic drugs, nucleic acid molecules, expression constructs Use of recombinant cells or recombinant cells in the preparation of S protein inhibitors, competitive inhibitors of ACE2 and S protein binding, or in the preparation of prevention and/or treatment of coronavirus infections or diseases caused by the coronavirus infections Preferably, the disease caused by the coronavirus infection is a disease caused by a new coronavirus infection, especially a new coronavirus pneumonia.
本发明的RBD/ACE2阻遏肽、融合蛋白、纳米颗粒、药物组合物、SARS-CoV-2表面刺突糖蛋白(S蛋白)拮抗剂、治疗药物、核酸分子、表达构建体或重组细胞可用于预防和/或治疗冠状病毒科病毒的感染,特别是用于治疗新型冠状病毒感染引起疾病,尤其是新型冠状 病毒肺炎。The RBD/ACE2 repressor peptide, fusion protein, nanoparticle, pharmaceutical composition, SARS-CoV-2 surface spike glycoprotein (S protein) antagonist, therapeutic drug, nucleic acid molecule, expression construct or recombinant cell of the present invention can be used for Prevent and/or treat infections of coronaviruses of the coronavirus family, especially for the treatment of diseases caused by new coronavirus infections, especially new coronavirus pneumonia.
实施例Example
下面,参考具体实施例更详细地描述本发明,然而,实施例仅用于说明目的,对于本发明不具有限制作用。下述实施例中所述试剂和生物材料,如无特殊说明,均可从商业途径获得。Hereinafter, the present invention will be described in more detail with reference to specific examples. However, the examples are only for illustrative purposes and do not have a limiting effect on the present invention. The reagents and biological materials described in the following examples can be obtained from commercial sources unless otherwise specified.
下述实施例中所用的实验材料的设计与实验方法如下:The design and experimental methods of the experimental materials used in the following examples are as follows:
1实验材料的设计1 Design of experimental materials
1.1多肽、蛋白或融合蛋白的设计1.1 Design of peptides, proteins or fusion proteins
(1)候选SARS-CoV-2的S蛋白的RBD/ACE2阻遏肽的氨基酸序列如下:(1) The amino acid sequence of the RBD/ACE2 repressor peptide of the S protein of the candidate SARS-CoV-2 is as follows:
a)ACE2-P1:a) ACE2-P1:
Figure PCTCN2021098204-appb-000001
Figure PCTCN2021098204-appb-000001
b)ACE2-P2:b) ACE2-P2:
Figure PCTCN2021098204-appb-000002
Figure PCTCN2021098204-appb-000002
c)ACE2-P3:c) ACE2-P3:
Figure PCTCN2021098204-appb-000003
Figure PCTCN2021098204-appb-000003
d)ACE2-P4:d)ACE2-P4:
Figure PCTCN2021098204-appb-000004
Figure PCTCN2021098204-appb-000004
(2)候选HFn单体亚基蛋白(2) Candidate HFn monomer subunit protein
a)野生型HFn单体亚基蛋白,其氨基酸序列如下(共计183个氨基酸):a) Wild-type HFn monomer subunit protein, its amino acid sequence is as follows (total 183 amino acids):
Figure PCTCN2021098204-appb-000005
Figure PCTCN2021098204-appb-000005
b)突变HFn1单体亚基蛋白(mHFn1):将野生型HFn单体亚基蛋白C端的α-螺旋去掉,获得mHFn1,其氨基酸序列如下(共计163个氨基酸):b) Mutant HFn1 monomer subunit protein (mHFn1): Remove the α-helix at the C-terminus of the wild-type HFn monomer subunit protein to obtain mHFn1. Its amino acid sequence is as follows (a total of 163 amino acids):
Figure PCTCN2021098204-appb-000006
Figure PCTCN2021098204-appb-000006
c)突变HFn2单体亚基蛋白(mHFn2):将野生型HFn单体亚基蛋白第91、103、131位的Cys分别突变为Glu、Ala、Ala,获得mHFn2,其氨基酸序列如下(共计183个氨基酸):c) Mutant HFn2 monomer subunit protein (mHFn2): The Cys at positions 91, 103, and 131 of the wild-type HFn monomer subunit protein were mutated to Glu, Ala, and Ala, respectively, to obtain mHFn2. Its amino acid sequence is as follows (total 183 Amino acids):
Figure PCTCN2021098204-appb-000007
Figure PCTCN2021098204-appb-000007
d)突变HFn3单体亚基蛋白(mHFn3):将野生型HFn单体亚基蛋白C端的α-螺旋去掉,并将第91、103、131位的Cys分别突变为Glu、Ala、Ala,获得mHFn3,其氨基酸序列如下(共计163个氨基酸):d) Mutated HFn3 monomer subunit protein (mHFn3): Remove the α-helix at the C-terminus of the wild-type HFn monomer subunit protein, and mutate the Cys at positions 91, 103, and 131 to Glu, Ala, and Ala, respectively, to obtain The amino acid sequence of mHFn3 is as follows (163 amino acids in total):
Figure PCTCN2021098204-appb-000008
Figure PCTCN2021098204-appb-000008
(3)RBD/ACE2阻遏肽与HFn单体亚基蛋白的融合蛋白(3) Fusion protein of RBD/ACE2 repressor peptide and HFn monomer subunit protein
a)ACE2-P1-mHFn2的氨基酸序列a) Amino acid sequence of ACE2-P1-mHFn2
将ACE2-P1通过linker(G4S)3连接至突变mHFn2亚基的N端形成融合蛋白:Connect ACE2-P1 to the N-terminus of the mutant mHFn2 subunit via linker(G4S)3 to form a fusion protein:
Figure PCTCN2021098204-appb-000009
Figure PCTCN2021098204-appb-000009
Figure PCTCN2021098204-appb-000010
Figure PCTCN2021098204-appb-000010
b)mHFn3-ACE2-P1的氨基酸序列b) Amino acid sequence of mHFn3-ACE2-P1
将ACE2-P1通过linker(G4S)3连接至C端截短的HFn亚基(mHFn3)的C端形成融合蛋白:Connect ACE2-P1 to the C-terminus of the C-terminus truncated HFn subunit (mHFn3) via linker (G4S)3 to form a fusion protein:
Figure PCTCN2021098204-appb-000011
Figure PCTCN2021098204-appb-000011
c)mHFn2-ACE2-P1的氨基酸序列c) Amino acid sequence of mHFn2-ACE2-P1
将ACE2-P1插入突变mHFn2亚基αA和αB的Loop中形成融合蛋白:Insert ACE2-P1 into the loop of mutant mHFn2 subunits αA and αB to form a fusion protein:
Figure PCTCN2021098204-appb-000012
Figure PCTCN2021098204-appb-000012
d)ACE2-P2-mHFn2的氨基酸序列d) Amino acid sequence of ACE2-P2-mHFn2
将ACE2-P2通过linker(G4S)3连接至突变mHFn2亚基的N端形成融合蛋白:Connect ACE2-P2 to the N-terminus of the mutant mHFn2 subunit via linker(G4S)3 to form a fusion protein:
Figure PCTCN2021098204-appb-000013
Figure PCTCN2021098204-appb-000013
e)mHFn3-ACE2-P2的氨基酸序列e) Amino acid sequence of mHFn3-ACE2-P2
将ACE2-P2通过linker(G4S)3连接至C端截短的HFn亚基(mHFn3)的C端形成融合蛋白:Connect ACE2-P2 to the C-terminus of the C-terminal truncated HFn subunit (mHFn3) via linker (G4S)3 to form a fusion protein:
Figure PCTCN2021098204-appb-000014
Figure PCTCN2021098204-appb-000014
f)ACE2-P3-mHFn2的氨基酸序列f) Amino acid sequence of ACE2-P3-mHFn2
将ACE2-P3通过linker(G4S)3连接至突变mHFn2亚基的N端形成融合蛋白:Connect ACE2-P3 to the N-terminus of the mutant mHFn2 subunit via linker(G4S)3 to form a fusion protein:
Figure PCTCN2021098204-appb-000015
Figure PCTCN2021098204-appb-000015
g)mHFn3-ACE2-P3的氨基酸序列g) Amino acid sequence of mHFn3-ACE2-P3
将ACE2-P3通过linker(G4S)3连接至C端截短的HFn亚基(mHFn3)的C端形成融合蛋白:Connect ACE2-P3 to the C-terminus of the C-terminal truncated HFn subunit (mHFn3) via linker (G4S)3 to form a fusion protein:
Figure PCTCN2021098204-appb-000016
Figure PCTCN2021098204-appb-000016
h)mHFn2-ACE2-P3的氨基酸序列h) Amino acid sequence of mHFn2-ACE2-P3
将ACE2-P3插入突变mHFn2亚基αA和αB的Loop中形成融合蛋白:Insert ACE2-P3 into the loop of mutant mHFn2 subunits αA and αB to form a fusion protein:
Figure PCTCN2021098204-appb-000017
Figure PCTCN2021098204-appb-000017
Figure PCTCN2021098204-appb-000018
Figure PCTCN2021098204-appb-000018
i)ACE2-P4-mHFn2的氨基酸序列i) Amino acid sequence of ACE2-P4-mHFn2
将ACE2-P4通过linker(G4S)3连接至突变mHFn2亚基的N端形成融合蛋白:Connect ACE2-P4 to the N-terminus of the mutant mHFn2 subunit via linker(G4S)3 to form a fusion protein:
Figure PCTCN2021098204-appb-000019
Figure PCTCN2021098204-appb-000019
j)mHFn3-ACE2-P4的氨基酸序列j) Amino acid sequence of mHFn3-ACE2-P4
将ACE2-P4通过linker(G4S)3连接至C端截短的HFn亚基(mHFn3)的C端形成融合蛋白:Connect ACE2-P4 to the C-terminus of the C-terminal truncated HFn subunit (mHFn3) via linker (G4S)3 to form a fusion protein:
Figure PCTCN2021098204-appb-000020
Figure PCTCN2021098204-appb-000020
k)mHFn2-ACE2-P4的氨基酸序列k) Amino acid sequence of mHFn2-ACE2-P4
将ACE2-P4插入突变mHFn2亚基αA和αB的Loop中形成融合蛋白:Insert ACE2-P4 into the loop of mutant mHFn2 subunits αA and αB to form a fusion protein:
Figure PCTCN2021098204-appb-000021
Figure PCTCN2021098204-appb-000021
(4)候选LFn单体亚基蛋白(4) Candidate LFn monomer subunit protein
a)野生型LFn单体亚基蛋白,其氨基酸序列如下(共计174个氨基酸):a) Wild-type LFn monomer subunit protein, its amino acid sequence is as follows (a total of 174 amino acids):
Figure PCTCN2021098204-appb-000022
Figure PCTCN2021098204-appb-000022
b)突变LFn1单体亚基蛋白(mLFn1):将野生型LFn的126位的Cys突变为Ala(LFn C126A),获得mLFn1,其氨基酸序列如下(共计174个氨基酸):b) Mutated LFn1 monomer subunit protein (mLFn1): The Cys at position 126 of wild-type LFn was mutated to Ala (LFn C126A) to obtain mLFn1. Its amino acid sequence is as follows (a total of 174 amino acids):
Figure PCTCN2021098204-appb-000023
Figure PCTCN2021098204-appb-000023
c)突变LFn2单体亚基蛋白(mLFn2):将野生型LFn单体亚基蛋白C端的α-螺旋去掉,获得mLFn2,其氨基酸序列如下(共计157个氨基酸):c) Mutant LFn2 monomer subunit protein (mLFn2): Remove the α-helix at the C-terminus of the wild-type LFn monomer subunit protein to obtain mLFn2. Its amino acid sequence is as follows (a total of 157 amino acids):
Figure PCTCN2021098204-appb-000024
Figure PCTCN2021098204-appb-000024
d)突变LFn3单体亚基蛋白(mLFn3):将野生型LFn单体亚基蛋白C端的α-螺旋去掉,并将第127位的Cys分别突变为Ala,获得mLFn3,其氨基酸序列如下(共计157个氨基酸):d) Mutant LFn3 monomer subunit protein (mLFn3): Remove the α-helix at the C-terminus of the wild-type LFn monomer subunit protein, and mutate the Cys at position 127 to Ala to obtain mLFn3. The amino acid sequence is as follows (total 157 amino acids):
Figure PCTCN2021098204-appb-000025
Figure PCTCN2021098204-appb-000025
(5)RBD/ACE2阻遏肽与LFn单体亚基蛋白的融合蛋白(5) Fusion protein of RBD/ACE2 repressor peptide and LFn monomer subunit protein
a)mLFn2-ACE2-P1的氨基酸序列a) Amino acid sequence of mLFn2-ACE2-P1
将ACE2-P1通过linker(G4S)3连接至突变mLFn2亚基的N端形成融合蛋白:Connect ACE2-P1 to the N-terminus of the mutant mLFn2 subunit via linker(G4S)3 to form a fusion protein:
Figure PCTCN2021098204-appb-000026
Figure PCTCN2021098204-appb-000026
Figure PCTCN2021098204-appb-000027
Figure PCTCN2021098204-appb-000027
b)mLFn3-ACE2-P1的氨基酸序列b) The amino acid sequence of mLFn3-ACE2-P1
将ACE2-P1通过linker(G4S)3连接至C端截短的LFn亚基(mLFn3)的C端形成融合蛋白:Connect ACE2-P1 to the C-terminus of the C-terminus truncated LFn subunit (mLFn3) via linker(G4S)3 to form a fusion protein:
Figure PCTCN2021098204-appb-000028
Figure PCTCN2021098204-appb-000028
c)mLFn2-ACE2-P1的氨基酸序列c) Amino acid sequence of mLFn2-ACE2-P1
将ACE2-P1插入突变mLFn2亚基αA和αB的Loop中形成融合蛋白:Insert ACE2-P1 into the loop of mutant mLFn2 subunits αA and αB to form a fusion protein:
Figure PCTCN2021098204-appb-000029
Figure PCTCN2021098204-appb-000029
d)ACE2-P2-mLFn2的氨基酸序列d) Amino acid sequence of ACE2-P2-mLFn2
将ACE2-P2通过linker(G4S)3连接至突变mLFn2亚基的N端形成融合蛋白:Connect ACE2-P2 to the N-terminus of the mutant mLFn2 subunit via linker(G4S)3 to form a fusion protein:
Figure PCTCN2021098204-appb-000030
Figure PCTCN2021098204-appb-000030
e)mLFn3-ACE2-P2的氨基酸序列e) Amino acid sequence of mLFn3-ACE2-P2
将ACE2-P2通过linker(G4S)3连接至C端截短的LFn亚基(mLFn3)的C端形成融合蛋白:Connect ACE2-P2 to the C-terminus of the C-terminus truncated LFn subunit (mLFn3) via linker(G4S)3 to form a fusion protein:
Figure PCTCN2021098204-appb-000031
Figure PCTCN2021098204-appb-000031
f)ACE2-P3-mLFn2的氨基酸序列f) Amino acid sequence of ACE2-P3-mLFn2
将ACE2-P3通过linker(G4S)3连接至突变mLFn2亚基的N端形成融合蛋白:Connect ACE2-P3 to the N-terminus of the mutant mLFn2 subunit via linker(G4S)3 to form a fusion protein:
Figure PCTCN2021098204-appb-000032
Figure PCTCN2021098204-appb-000032
g)mLFn3-ACE2-P3的氨基酸序列g) Amino acid sequence of mLFn3-ACE2-P3
将ACE2-P3通过linker(G4S)3连接至C端截短的LFn亚基(mLFn3)的C端形成融合蛋白:Connect ACE2-P3 to the C-terminus of the C-terminus truncated LFn subunit (mLFn3) via linker(G4S)3 to form a fusion protein:
Figure PCTCN2021098204-appb-000033
Figure PCTCN2021098204-appb-000033
h)mLFn2-ACE2-P3的氨基酸序列h) Amino acid sequence of mLFn2-ACE2-P3
将ACE2-P3插入突变mLFn2亚基αA和αB的Loop中形成融合蛋白:Insert ACE2-P3 into the loop of mutant mLFn2 subunits αA and αB to form a fusion protein:
Figure PCTCN2021098204-appb-000034
Figure PCTCN2021098204-appb-000034
i)ACE2-P4-mLFn2的氨基酸序列i) Amino acid sequence of ACE2-P4-mLFn2
将ACE2-P4通过linker(G4S)3连接至突变mLFn2亚基的N端形成融合蛋白:Connect ACE2-P4 to the N-terminus of the mutant mLFn2 subunit via linker(G4S)3 to form a fusion protein:
Figure PCTCN2021098204-appb-000035
Figure PCTCN2021098204-appb-000035
j)mLFn3-ACE2-P4的氨基酸序列j) Amino acid sequence of mLFn3-ACE2-P4
将ACE2-P4通过linker(G4S)3连接至C端截短的LFn亚基(mHFn3)的C端形成融合蛋白:Connect ACE2-P4 to the C-terminus of the C-terminal truncated LFn subunit (mHFn3) via linker (G4S)3 to form a fusion protein:
Figure PCTCN2021098204-appb-000036
Figure PCTCN2021098204-appb-000036
k)mLFn2-ACE2-P4的氨基酸序列k) The amino acid sequence of mLFn2-ACE2-P4
将ACE2-P4插入突变mLFn2亚基αA和αB的Loop中形成融合蛋白:Insert ACE2-P4 into the loop of mutant mLFn2 subunits αA and αB to form a fusion protein:
Figure PCTCN2021098204-appb-000037
Figure PCTCN2021098204-appb-000037
1.2编码基因的设计1.2 Design of coding genes
根据宿主菌的密码子偏爱性合成上述多肽、蛋白或融合蛋白的编码基因。According to the codon preference of the host bacteria, the coding genes of the above-mentioned polypeptides, proteins or fusion proteins are synthesized.
1.3表达载体的构建1.3 Construction of expression vector
选择大肠杆菌表达外源蛋白的常用载体pET-22b(+),氨苄青霉素抗性(Amp +),选择Nde I和Bam H I酶切位点嵌入目的基因,获得重组pET-22b质粒。经酶切图谱和基因测序确证表达载体构建成功。其中,pET-22b(+)的质粒图谱如图1所示。 The commonly used vector pET-22b(+) for expressing foreign proteins in Escherichia coli is selected, ampicillin resistance (Amp + ), Nde I and Bam H I restriction sites are selected to insert the target gene, and the recombinant pET-22b plasmid is obtained. Restriction map and gene sequencing confirmed that the expression vector was successfully constructed. Among them, the plasmid map of pET-22b(+) is shown in Figure 1.
1.4重组菌株的构建1.4 Construction of recombinant strains
选择E.coli BL21(DE3)作为宿主菌,将含有目的基因的重组pET-22b质粒转化至宿主菌感受态细胞中,通过含氨苄青霉素的抗性平板筛选阳性克隆,确定重组菌株。E. coli BL21(DE3) was selected as the host bacteria, the recombinant pET-22b plasmid containing the target gene was transformed into competent cells of the host bacteria, and the positive clones were screened through the ampicillin resistance plate to determine the recombinant strain.
2.实验方法2. Experimental method
2.1重组菌株构建2.1 Recombinant strain construction
2.1.1重组质粒重悬2.1.1 Resuspension of recombinant plasmid
取重组pET-22b质粒冻干粉10μg,分别用200μl TE缓冲液重悬均匀,10μl/管分装,分别留1管备用,其余冻存于-80℃冰箱备用。Take 10μg of recombinant pET-22b plasmid lyophilized powder, resuspend it in 200μl TE buffer, and pack 10μl/tube, save 1 tube separately, and store the rest in the refrigerator at -80℃ for later use.
2.1.2转化2.1.2 Conversion
(1)从-80℃冰箱中取出E.coli BL21(DE3)感受态细胞,放置在冰上融化后(约5min左右),在冰浴中,取0.5~1μl质粒重悬液加入到20μl感受态细胞中充分混匀,在冰上静置孵育30min。(1) Take out E.coli BL21(DE3) competent cells from the refrigerator at -80℃, place them on ice and melt (about 5min), in an ice bath, take 0.5-1μl plasmid resuspension and add it to 20μl feeling Mix well in the conditioned cells, and incubate them on ice for 30 min.
(2)将上述样品于42℃水浴热激90s后,立即放置到冰上,静置2min。(2) After heat shocking the above sample in a 42°C water bath for 90 seconds, immediately place it on ice and let it stand for 2 minutes.
(3)取280μL无菌LB液体培养基,加入到热激后的样品中,在37℃,220rpm活化1h。(3) Take 280 μL of sterile LB liquid medium, add it to the heat-shocked sample, and activate it at 37°C and 220 rpm for 1 hour.
(4)分别取上述转化后的菌液150μl涂布于含终浓度为100μg/mL氨苄青霉素(氨苄青霉素母液浓度100mg/mL)的LB平板上,37℃培养箱培养过夜,观察菌落生长情况。(4) Take 150 μl of the above-mentioned transformed bacterial solution and spread it on an LB plate containing a final concentration of 100 μg/mL ampicillin (the concentration of ampicillin mother solution is 100 mg/mL), and incubate overnight in an incubator at 37° C. to observe the colony growth.
2.2蛋白表达2.2 Protein expression
2.2.1摇瓶培养2.2.1 Shake flask culture
分别取抗性平板上大且饱满的克隆3个,分别接种于40~60mL LB培养基中(摇瓶),于37℃培养至OD 600 1.0-1.5左右,加入0.25~0.5mM IPTG,25℃诱导表达3-8h或16℃诱导过夜,经SDS-PAGE检测目的蛋白表达情况。 Take 3 large and plump clones on the resistant plate, respectively inoculate them in 40-60mL LB medium (shaking flask), culture at 37℃ to OD 600 around 1.0-1.5, add 0.25~0.5mM IPTG, 25℃ Induced expression for 3-8h or induced overnight at 16°C. The expression of the target protein was detected by SDS-PAGE.
2.2.2检测样品制备2.2.2 Test sample preparation
菌体裂解:取30mL菌液,5000-8000r/min离心10-30min,弃上清,加入30mL 20mM Tris-HCl,pH8.0缓冲液重悬均匀,于高压均质机800-1000bar破碎3次。Bacterial lysis: Take 30mL of bacteria liquid, centrifuge at 5000-8000r/min for 10-30min, discard the supernatant, add 30mL 20mM Tris-HCl, pH8.0 buffer solution, resuspend it evenly, and break it in a high-pressure homogenizer at 800-1000bar for 3 times .
蛋白纯化:将破碎后的菌液离心,去除大肠杆菌碎片,上清液72℃加热15分钟,沉淀杂蛋白,离心去除沉淀后,上清液用Superdex 200pg(GE Healthcare)柱子分离纯化,电泳测定纯度。纯化后的HFn可冻干保存,也可储存在pH 8.0,50mM Tris-HCl溶液中。Protein purification: Centrifuge the broken bacterial solution to remove E. coli fragments. Heat the supernatant at 72°C for 15 minutes to precipitate impurities. After centrifugation to remove the precipitate, the supernatant is separated and purified with a Superdex 200 pg (GE Healthcare) column and determined by electrophoresis purity. The purified HFn can be lyophilized and stored, or stored in a pH 8.0, 50mM Tris-HCl solution.
SDS-PAGE样品制备:取上述菌体裂解液100μL,8000-10000rpm离心10-20min,取20μL上清液至另一离心管中,加入5μL 5×上样缓冲液(Loading buffer)混匀,85-95℃孵育5min,此为裂解液上清样品;将剩余的沉淀,加入100μL 20mM Tris-HCl,pH8.0缓冲液重悬沉淀,取20μL重悬液加入5μL 5×上样缓冲液混匀,85-95℃孵育5min,此为裂解液沉淀样品。SDS-PAGE sample preparation: Take 100μL of the above bacterial lysate, centrifuge at 8000-10000rpm for 10-20min, take 20μL of supernatant to another centrifuge tube, add 5μL of 5× loading buffer and mix well, 85 Incubate at -95°C for 5 minutes, this is the lysate supernatant sample; add 100μL of 20mM Tris-HCl, pH8.0 buffer to resuspend the pellet for the remaining pellet, add 20μL of resuspension to 5μL of 5× sample buffer and mix well ,Incubate at 85-95℃ for 5min, this is the lysate precipitation sample.
2.3蛋白活性检测方法:2.3 Protein activity detection method:
使用间接ELISA法检测纯化后的蛋白与SARS-CoV-2的S蛋白的结合活性,由此证明复性液中是否存在具有结合活性的目的蛋白。The indirect ELISA method was used to detect the binding activity of the purified protein with the S protein of SARS-CoV-2, thereby proving whether there is a target protein with binding activity in the refolding solution.
实验操作流程如下:The experimental operation process is as follows:
1)包板:96孔板包被待测样品或ACE-2参考品,放入4℃冰箱孵育过夜;1) Coating plate: Coat the sample to be tested or the ACE-2 reference product in a 96-well plate, and incubate overnight in a refrigerator at 4°C;
2)洗板:利用PBST(取300μl Tween-20加入PBS 100ml中混匀使用)清洗3次;2) Wash the plate: Wash 3 times with PBST (take 300μl Tween-20 and add PBS 100ml and mix well);
3)封闭:加入5%BSA封闭液300μL/孔,覆上封板膜,37℃培养箱中孵育2h;3) Blocking: Add 300μL/well of 5% BSA blocking solution, cover with sealing film, and incubate in a 37℃ incubator for 2h;
4)洗板:将酶标板用1×PBST于洗板机洗3次;4) Washing the plate: Wash the ELISA plate 3 times with 1×PBST in a plate washer;
5)孵育S-RBD-mFc蛋白(北京义翘神州生物技术有限公司):利用蛋白稳定剂(购自湖州英创生物科技有限公司,PR-SS-002)将S-RBD-mFc蛋白溶解并稀释至工作浓度为1.0~1.5μg/mL,100μL/孔,覆上封板膜,37℃培养箱中孵育2h;5) Incubate the S-RBD-mFc protein (Beijing Yiqiao Shenzhou Biotechnology Co., Ltd.): Use a protein stabilizer (purchased from Huzhou Yingchuang Biotechnology Co., Ltd., PR-SS-002) to dissolve the S-RBD-mFc protein and Dilute to a working concentration of 1.0~1.5μg/mL, 100μL/well, cover with sealing film, and incubate in a 37℃ incubator for 2h;
6)洗板:将酶标板用1×PBST于洗板机洗3次;6) Washing the plate: Wash the ELISA plate with 1×PBST in a plate washer for 3 times;
7)孵育一抗:将Anti-mFc抗体用蛋白稳定剂(购自湖州英创生物科技有限公司,PR-SS-002)稀释(1:1000),100μL/孔,覆上封板膜,37℃培养箱中孵育1.5h;7) Incubate the primary antibody: Dilute Anti-mFc antibody with protein stabilizer (purchased from Huzhou Yingchuang Biotechnology Co., Ltd., PR-SS-002) (1:1000), 100μL/well, cover with sealing film, 37 Incubate in an incubator at ℃ for 1.5h;
8)洗板:将酶标板用1×PBST于洗板机洗3次;8) Washing the plate: Wash the ELISA plate with 1×PBST in a plate washer for 3 times;
9)孵育HRP酶标二抗:将酶标二抗(Cytiva,山羊抗小鼠)用5%BSA稀释(1:5000),100μL/孔,覆上封板膜,37℃培养箱中孵育0.5h;9) Incubate HRP enzyme-labeled secondary antibody: Dilute the enzyme-labeled secondary antibody (Cytiva, goat anti-mouse) with 5% BSA (1:5000), 100μL/well, cover with sealing film, and incubate in a 37℃ incubator for 0.5 h;
10)洗板:将酶标板用1×PBST于洗板机洗3次;10) Washing the plate: Wash the ELISA plate with 1×PBST in a plate washer for 3 times;
11)显色:加入TMB一步显色液,注意避光,100μL/孔,避光5min、10min和30min分别检测一次,立即用酶标仪于650nm检测吸光值。11) Color development: add TMB one-step color development solution, pay attention to avoid light, 100μL/well, avoid light for 5min, 10min and 30min respectively, and detect the absorbance at 650nm with a microplate reader immediately.
实施例1:ACE2-P1-mHFn2融合蛋白的基因序列设计Example 1: Gene sequence design of ACE2-P1-mHFn2 fusion protein
构建ACE2-P1-mHFn2融合蛋白,并根据大肠杆菌的密码子偏爱性优化编码基因序列,获得优化的ACE2-P1-mHFn2(编号:XYD-406-000)基因,其具体序列如下:Construct the ACE2-P1-mHFn2 fusion protein, and optimize the coding gene sequence according to the codon preference of E. coli to obtain the optimized ACE2-P1-mHFn2 (number: XYD-406-000) gene. The specific sequence is as follows:
Figure PCTCN2021098204-appb-000038
Figure PCTCN2021098204-appb-000038
Figure PCTCN2021098204-appb-000039
Figure PCTCN2021098204-appb-000039
实施例2:mHFn2-ACE2-P1融合蛋白的基因序列设计Example 2: Gene sequence design of mHFn2-ACE2-P1 fusion protein
构建mHFn2-ACE2-P1融合蛋白,并根据大肠杆菌的密码子偏爱性优化编码基因序列,获得优化的mHFn2-ACE2-P1(编号:XYD-407-000)基因,其具体序列如下:Construct the mHFn2-ACE2-P1 fusion protein, and optimize the coding gene sequence according to the codon preference of E. coli to obtain the optimized mHFn2-ACE2-P1 (number: XYD-407-000) gene. The specific sequence is as follows:
Figure PCTCN2021098204-appb-000040
Figure PCTCN2021098204-appb-000040
实施例3:ACE2-P2-mHFn2融合蛋白的基因序列设计Example 3: Gene sequence design of ACE2-P2-mHFn2 fusion protein
构建ACE2-P2-mHFn2融合蛋白,并根据大肠杆菌的密码子偏爱性优化编码基因序列,获得优化的ACE2-P2-mHFn2(编号:XYD-408-000)基因,其具体序列如下:Construct the ACE2-P2-mHFn2 fusion protein, and optimize the coding gene sequence according to the codon preference of E. coli to obtain the optimized ACE2-P2-mHFn2 (number: XYD-408-000) gene. The specific sequence is as follows:
Figure PCTCN2021098204-appb-000041
Figure PCTCN2021098204-appb-000041
实施例4:表达实施例1-3融合蛋白的菌体构建、表达和纯化Example 4: Construction, expression and purification of bacterial cells expressing the fusion protein of Example 1-3
1.表达载体构建1. Expression vector construction
选择大肠杆菌表达外源蛋白的常用载体pET-22b(+),氨苄青霉素抗性(Amp+),选择Nde I和BamH I酶切位点分别嵌入目的基因XYD-406-000、XYD-407-000和XYD-408-000,得以下三种质粒:重组质粒pET-22b-XYD-406-000、pET-22b-XYD-407-000和pET-22b-XYD-408-000,其重组质粒图谱分别如图2-4所示。重组质粒抽提后检测质粒纯度和样品浓度,符合要求。Select the commonly used vector pET-22b(+) for expression of foreign proteins in E. coli, ampicillin resistance (Amp+), and select Nde I and BamH I restriction sites to insert target genes XYD-406-000, XYD-407-000, respectively And XYD-408-000 to get the following three plasmids: recombinant plasmid pET-22b-XYD-406-000, pET-22b-XYD-407-000 and pET-22b-XYD-408-000, the recombinant plasmid maps are respectively As shown in Figure 2-4. After the recombinant plasmid is extracted, the purity of the plasmid and the concentration of the sample are tested, and it meets the requirements.
将获得的三种重组质粒经Xho I和XbaI双酶切(分别临近Nde I和BamH I),得到的酶切片段含有目的基因,长度大约600-800bp,酶切鉴定图如图5所示,经双酶切后,电泳图 中750bp左右的是目的基因条带,大小在理论值附近,表明目的基因已构建至表达质粒中,重组质粒经测序100%序列正确。The three recombinant plasmids obtained were double digested with Xho I and XbaI (near Nde I and BamH I, respectively), and the digested fragments contained the target gene and were about 600-800 bp in length. The digestion identification diagram is shown in Figure 5. After double enzyme digestion, the band of the target gene is about 750bp in the electrophoresis diagram, and the size is near the theoretical value, indicating that the target gene has been constructed into the expression plasmid, and the recombinant plasmid is 100% sequence correct after sequencing.
2.重组菌株抗性筛选2. Resistant screening of recombinant strains
将上述三种重组质粒分别转化E.coli BL21(DE3),获得重组菌株406(BP-HS-008)、407(BP-HS-009)和408(BP-HS-010)。分别将包含重组菌株406、407和408的菌液100μl涂布于含终浓度为100μg/mL氨苄青霉素(氨苄青霉素母液浓度100mg/mL)的LB平板上,37℃培养箱培养过夜。菌落生长情况如图6所示,重组菌株在含有抗性的LB平板上均能够生长,且克隆数量多,由此判断重组菌株均具有相应抗性,与菌株构建时选用的质粒pET-22b(+)的抗性一致。The above three recombinant plasmids were respectively transformed into E. coli BL21 (DE3) to obtain recombinant strains 406 (BP-HS-008), 407 (BP-HS-009) and 408 (BP-HS-010). Separately spread 100 μl of bacterial solution containing recombinant strains 406, 407 and 408 on an LB plate containing a final concentration of 100 μg/mL ampicillin (the concentration of ampicillin mother liquor was 100 mg/mL), and cultivate overnight in a 37° C. incubator. The growth of the colony is shown in Figure 6. The recombinant strains can grow on the resistant LB plate, and the number of clones is large. It can be judged that the recombinant strains have the corresponding resistance, and the plasmid pET-22b( +) The resistance is the same.
取抗性平板上的表达量较高的单菌落进行扩增,OD 600至1.5~2.0时分别加入终浓度20%的甘油,分装1mL/管,此为甘油菌。甘油菌储存于-80℃冰箱,待后续发酵使用。 Take a single colony with a higher expression on the resistant plate for amplification, add glycerol with a final concentration of 20% when the OD 600 reaches 1.5 to 2.0, and distribute 1 mL/tube. This is a glycerol bacteria. The glycerol bacteria are stored in a refrigerator at -80°C and used for subsequent fermentation.
3.RBM-HFn融合蛋白的表达及蛋白活性检测3. Expression of RBM-HFn fusion protein and detection of protein activity
3.1发酵样品制备3.1 Preparation of fermentation samples
分别取三种质粒的甘油菌于室温融化后以1%接种于LB培养基中,于37℃,220rpm摇床培养至OD 600至1.0,加终浓度为0.5mM IPTG,于25℃诱导目的蛋白表达,诱导4-5h终止培养,获得发酵液。 The glycerol bacteria of the three plasmids were thawed at room temperature and inoculated at 1% in LB medium, cultured at 37℃, 220rpm shaker to OD 600 to 1.0, added with a final concentration of 0.5mM IPTG, and induced the target protein at 25℃ Expression, induce 4-5h to terminate the culture, and obtain the fermentation broth.
3.2菌体收集3.2 Bacteria collection
分别取上述甘油菌的发酵液,于4℃,10000rpm离心25min收集菌体,分别获得含各质粒菌的菌液。The fermentation broth of the above-mentioned glycerol bacteria was taken, and the bacteria were collected by centrifugation at 4° C. and 10,000 rpm for 25 min to obtain the bacteria broths containing the respective plasmid bacteria.
3.3.样品检测3.3. Sample detection
3.3.1发酵样品目的蛋白可溶性检测3.3.1 Determination of the solubility of the target protein in the fermentation sample
(1)样品制备(1) Sample preparation
菌体裂解:三种质粒菌各取30mL菌液,5000r/min离心15min,弃上清,加入30mL20mM Tris-HCl,pH8.0缓冲液重悬均匀,于高压均质机1000bar(永联生物,UH-03)破碎3次,获得菌体裂解液。Bacterial lysis: Take 30 mL of each of the three plasmid bacteria, centrifuge at 5000 r/min for 15 min, discard the supernatant, add 30 mL of 20 mM Tris-HCl, pH 8.0 buffer to resuspend, and place in a high-pressure homogenizer at 1000 bar (Yonglian Biotech, UH-03) was broken three times to obtain a cell lysate.
SDS-PAGE样品制备:取上述菌体裂解液100μL,10000rpm离心10min,取20μL上清液至另一离心管中,加入5μL 5×上样缓冲液混匀,95℃孵育5min,此为裂解液上清样品(同一样品设置三个平行样本,分别标记为1S、2S和3S);将剩余的沉淀,加入100μL 20mM Tris-HCl,pH8.0缓冲液重悬沉淀,取20μL重悬液加入5μL 5×上样缓冲液混匀,95℃孵育5min,此为裂解液沉淀样品(同一样品设置三个平行样本,分别标记为1P、2P和3P)。样品于95℃~100℃加热5分钟,冷却后离心,混匀待检。SDS-PAGE sample preparation: Take 100μL of the above-mentioned bacterial lysate, centrifuge at 10000rpm for 10min, take 20μL of supernatant to another centrifuge tube, add 5μL of 5× loading buffer to mix, incubate at 95℃ for 5min, this is the lysate Supernatant sample (three parallel samples for the same sample, labeled 1S, 2S, and 3S); add 100μL of 20mM Tris-HCl, pH8.0 buffer to resuspend the pellet for the remaining pellet, and add 20μL of the resuspension solution to 5μL Mix well with 5× loading buffer and incubate at 95°C for 5 minutes. This is the lysate precipitation sample (three parallel samples are set for the same sample, labeled 1P, 2P, and 3P). The sample was heated at 95°C to 100°C for 5 minutes, cooled, centrifuged, and mixed for inspection.
(2)SDS-PAGE检测(2) SDS-PAGE detection
上样量为10μL,恒定电压90~125V,设定电流上限200mA,设定电泳时间60~90分钟。The loading volume is 10μL, the constant voltage is 90~125V, the current upper limit is 200mA, and the electrophoresis time is 60~90 minutes.
(3)实验结果(3) Experimental results
如图7所示,三种蛋白(XYD-406-000、XYD-407-000和XYD-408-000)均分布于上清中,说明各重组菌株均可可溶性表达。As shown in Figure 7, the three proteins (XYD-406-000, XYD-407-000 and XYD-408-000) are all distributed in the supernatant, indicating that each recombinant strain can be soluble and expressed.
3.3.2纳米颗粒的形态和粒径检测3.3.2 Morphology and particle size detection of nanoparticles
TEM检测RBM-HFn纳米颗粒形态:TEM detection of RBM-HFn nanoparticle morphology:
分别将纯化后获得的蛋白样品XYD-406-000、XYD-407-000和XYD-408-000(20μL,0.1mg/mL)滴加到处理后的铜网中,用1%的乙酸铀酰染色1分钟,然后用JEM-1400 80kv TEM(JEOL,Japan)成像。透射电镜结果(图8)表明,三种铁蛋白样品均呈现纳米颗粒状,且为均匀、规则的笼状蛋白结构,直径在大约14-17nm。The purified protein samples XYD-406-000, XYD-407-000 and XYD-408-000 (20μL, 0.1mg/mL) were added dropwise to the treated copper mesh, using 1% uranyl acetate Stain for 1 minute, and then image with JEM-1400 80kv TEM (JEOL, Japan). Transmission electron microscopy results (Figure 8) show that the three ferritin samples are all nano-particles, and have a uniform and regular cage-like protein structure, with a diameter of about 14-17nm.
DLS粒径检测:DLS particle size detection:
选用仪器Nano ZSE Nanosizer(Malvern,UK)检测样品粒径,参数设置Material为Protern,Dispersant为pH 8.0 50mM的Tris缓冲液。选择自动模式扫描。The instrument Nano ZSE Nanosizer (Malvern, UK) is used to detect the particle size of the sample. The parameter settings are Material as Protern and Dispersant as Tris buffer with pH 8.0 50mM. Select automatic mode scanning.
样品均为储存在pH 8.0 50mM Tris缓冲液中,蛋白浓度3.78mg/mL。结果分别如图9-11所示,纳米颗粒的平均粒径分别为约16.57nm(XYD-406-000)、17.04nm(XYD-407-000)和14.65nm(XYD-408-000)。The samples are stored in pH 8.0 50mM Tris buffer, and the protein concentration is 3.78mg/mL. The results are shown in Figures 9-11. The average particle size of the nanoparticles is about 16.57nm (XYD-406-000), 17.04nm (XYD-407-000) and 14.65nm (XYD-408-000).
3.3.3结合活性检测—间接ELISA法3.3.3 Binding activity detection-indirect ELISA method
使用间接ELISA法检测纯化后获得的蛋白与S蛋白的结合活性,由此证明复性液中是否存在具有结合活性的目的蛋白。The indirect ELISA method was used to detect the binding activity of the purified protein to the S protein, thereby proving whether there is a target protein with binding activity in the refolding solution.
纳米颗粒样品XYD-406-000、XYD-407-000和XYD-408-000活性检测结果分别如图12-14所示,结果表明,构建的三种蛋白均具有S蛋白结合活性,且具有浓度依赖性,其中XYD-408-000的活性最高。The activity detection results of nanoparticle samples XYD-406-000, XYD-407-000 and XYD-408-000 are shown in Figure 12-14, respectively. The results show that the three constructed proteins all have S protein binding activity and have a concentration Dependent, XYD-408-000 has the highest activity.

Claims (14)

  1. 一种RBD/ACE2阻遏肽,其中所述RBD/ACE2阻遏肽包含与SEQ ID NO.1、2、3或4所示氨基酸序列具有80%或以上同一性的氨基酸序列,优选具有85%、90%、95%、96%、97%、98%、99%以上同一性的氨基酸序列,更优选具有98%或99%以上同一性的氨基酸序列;更优选地,所述RBD/ACE2阻遏肽的氨基酸序列如SEQ ID NO.1、2、3或4所示。An RBD/ACE2 repressor peptide, wherein the RBD/ACE2 repressor peptide comprises an amino acid sequence having 80% or more identity with the amino acid sequence shown in SEQ ID NO. 1, 2, 3 or 4, preferably 85%, 90% %, 95%, 96%, 97%, 98%, 99% or more identical amino acid sequences, more preferably 98% or more 99% identical amino acid sequences; more preferably, the RBD/ACE2 repressor peptide The amino acid sequence is shown in SEQ ID NO. 1, 2, 3 or 4.
  2. 一种融合蛋白,其中所述融合蛋白包含权利要求1所述的RBD/ACE2阻遏肽;A fusion protein, wherein the fusion protein comprises the RBD/ACE2 repressor peptide of claim 1;
    优选地,所述融合蛋白还包含自组装的、单体亚基的至少一部分;Preferably, the fusion protein further comprises at least a part of self-assembled monomer subunits;
    优选地,所述单体亚基选自下组:铁蛋白单体亚基、单体encapsulin蛋白、单体03-33蛋白、单体硫加氧酶还原酶(SOR)蛋白、单体2,4-二氧四氢蝶啶合酶(lumazine synthase)(LS)蛋白、单体丙酮酸脱氢酶复合物(PDC)蛋白、单体氢硫辛酰胺乙酰转移酶(E2)蛋白以及甲病毒(如基孔肯雅病毒)的包膜(Env)蛋白;优选地,所述铁蛋白单体亚基是来源于哺乳动物来源的铁蛋白、两栖类动物来源的铁蛋白、细菌来源的铁蛋白或植物来源的铁蛋白中的任意一种或至少两种组合的铁蛋白单体亚基,优选为哺乳动物来源或细菌来源的铁蛋白单体亚基;Preferably, the monomer subunit is selected from the following group: ferritin monomer subunit, monomer encapsulin protein, monomer 03-33 protein, monomer thiooxygenase reductase (SOR) protein, monomer 2,4 -Lumazine synthase (LS) protein, monomeric pyruvate dehydrogenase complex (PDC) protein, monomeric hydrogen lipoamide acetyltransferase (E2) protein, and alphavirus (such as Chikungunya virus) envelope (Env) protein; preferably, the ferritin monomer subunit is ferritin derived from mammalian sources, ferritin derived from amphibians, ferritin derived from bacteria or plants The ferritin monomer subunits of any one or a combination of at least two of the source ferritin, preferably mammalian or bacterial ferritin monomer subunits;
    优选地,所述单体亚基是铁蛋白单体亚基;Preferably, the monomer subunit is a ferritin monomer subunit;
    优选地,所述铁蛋白单体亚基选自重链铁蛋白单体亚基或轻链铁蛋白单体亚基;Preferably, the ferritin monomer subunit is selected from a heavy chain ferritin monomer subunit or a light chain ferritin monomer subunit;
    更优选地,所述重链铁蛋白单体亚基包含与SEQ ID NO.5、6、7或8所示氨基酸序列具有80%或以上同一性的氨基酸序列,优选具有85%、90%、95%、96%、97%、98%、99%以上同一性的氨基酸序列,更优选具有98%或99%以上同一性的氨基酸序列;优选地,所述重链铁蛋白单体亚基的氨基酸序列如SEQ ID NO.5、6、7或8所示;More preferably, the heavy chain ferritin monomer subunit comprises an amino acid sequence having 80% or more identity with the amino acid sequence shown in SEQ ID NO. 5, 6, 7 or 8, preferably 85%, 90%, 95%, 96%, 97%, 98%, 99% or more identical amino acid sequences, more preferably 98% or 99% or more identical amino acid sequences; preferably, the heavy chain ferritin monomer subunit The amino acid sequence is shown in SEQ ID NO. 5, 6, 7 or 8;
    更优选地,所述轻链铁蛋白单体亚基包含与SEQ ID NO.20、21、22或23所示氨基酸序列具有80%或以上同一性的氨基酸序列,优选具有85%、90%、95%、96%、97%、98%、99%以上同一性的氨基酸序列,更优选具有98%或99%以上同一性的氨基酸序列;优选地,所述轻链铁蛋白单体亚基的氨基酸序列如SEQ ID NO.20、21、22或23所示;More preferably, the light chain ferritin monomer subunit comprises an amino acid sequence having 80% or more identity with the amino acid sequence shown in SEQ ID NO. 20, 21, 22 or 23, preferably 85%, 90%, 95%, 96%, 97%, 98%, 99% or more identical amino acid sequences, more preferably 98% or more 99% identical amino acid sequences; preferably, the light chain ferritin monomer subunit The amino acid sequence is shown in SEQ ID NO. 20, 21, 22 or 23;
    优选地,所述融合蛋白包含与SEQ ID NO.9-19或24-34中任一所示的氨基酸序列具有80%或以上同一性的氨基酸序列,优选具有85%、90%、95%、96%、97%、98%、99%以上同一性的氨基酸序列,更优选具有98%或99%以上同一性的氨基酸序列;优选地,所述融合蛋白选自SEQ ID NO.9-19或24-34。Preferably, the fusion protein comprises an amino acid sequence having 80% or more identity with the amino acid sequence shown in SEQ ID NO. 9-19 or 24-34, preferably 85%, 90%, 95%, An amino acid sequence with 96%, 97%, 98%, 99% or more identity, more preferably an amino acid sequence with 98% or more identity; preferably, the fusion protein is selected from SEQ ID NO. 9-19 or 24-34.
  3. 一种包含融合蛋白的纳米颗粒,其中所述融合蛋白包含RBD/ACE2阻遏肽以及自组装的、单体亚基的至少一部分,且其中所述纳米颗粒在其表面上展示所述RBD/ACE2阻遏肽,所述RBD/ACE2阻遏肽能够阻遏新冠状肺炎病毒(SARS-CoV-2)表面刺突糖蛋白(S蛋白)与血管紧张素转化酶2(ACE-2)结合。A nanoparticle comprising a fusion protein, wherein the fusion protein comprises an RBD/ACE2 repressor peptide and at least a part of a self-assembled, monomeric subunit, and wherein the nanoparticle displays the RBD/ACE2 repression on its surface A peptide, the RBD/ACE2 repressor peptide can inhibit the binding of new coronavirus (SARS-CoV-2) surface spike glycoprotein (S protein) with angiotensin converting enzyme 2 (ACE-2).
  4. 根据权利要求3所述的纳米颗粒,其中所述RBD/ACE2阻遏肽包含与SEQ ID NO.1、2、3或4所示氨基酸序列具有80%或以上同一性的氨基酸序列,优选具有85%、90%、95%、96%、97%、98%、99%以上同一性的氨基酸序列,更优选具有98%或99%以上同一性的氨基酸序列;更优选地,所述RBD/ACE2阻遏肽的氨基酸序列如SEQ ID NO.1、2、3或4所示。The nanoparticle according to claim 3, wherein the RBD/ACE2 repressor peptide comprises an amino acid sequence having 80% or more identity with the amino acid sequence shown in SEQ ID NO. 1, 2, 3 or 4, preferably 85% , 90%, 95%, 96%, 97%, 98%, 99% or more identical amino acid sequences, more preferably 98% or more 99% identical amino acid sequences; more preferably, the RBD/ACE2 represses The amino acid sequence of the peptide is shown in SEQ ID NO. 1, 2, 3 or 4.
  5. 根据权利要求3或4所述的纳米颗粒,其中所述单体亚基选自下组:铁蛋白单体亚基、单体encapsulin蛋白、单体03-33蛋白、单体硫加氧酶还原酶(SOR)蛋白、单体2,4-二氧四氢蝶啶合酶(lumazine synthase)(LS)蛋白、单体丙酮酸脱氢酶复合物(PDC)蛋白、单体氢硫辛酰胺乙酰转移酶(E2)蛋白以及甲病毒(如基孔肯雅病毒)的包膜(Env)蛋白;优选地,所述铁蛋白单体亚基是来源于哺乳动物来源的铁蛋白、两栖类动物来源的铁蛋白、细菌来源的铁蛋白或植物来源的铁蛋白中的任意一种或至少两种组合的铁蛋白单体亚基,优选为哺乳动物来源或细菌来源的铁蛋白单体亚基;The nanoparticle according to claim 3 or 4, wherein the monomer subunit is selected from the group consisting of ferritin monomer subunit, monomer encapsulin protein, monomer 03-33 protein, monomer thiooxygenase reductase (SOR) protein, monomeric 2,4-dioxotetrahydropteridine synthase (LS) protein, monomeric pyruvate dehydrogenase complex (PDC) protein, monomeric hydrolipoamide acetyl transfer Enzyme (E2) protein and the envelope (Env) protein of alphavirus (such as Chikungunya virus); preferably, the ferritin monomer subunit is derived from ferritin from mammalian sources, or from amphibians Ferritin monomer subunits of any one or a combination of ferritin, ferritin derived from bacteria or ferritin derived from plants, preferably ferritin monomer subunits derived from mammals or bacteria;
    优选地,所述哺乳动物来源的铁蛋白包括人源性铁蛋白、鼠源性铁蛋白或马脾脏铁蛋白 中的任意一种或至少两种的组合;Preferably, the mammalian-derived ferritin includes any one or a combination of at least two of human-derived ferritin, murine-derived ferritin, or horse spleen ferritin;
    优选地,所述细菌来源的铁蛋白包括幽门螺杆菌铁蛋白、大肠杆菌铁蛋白或激烈火球菌铁蛋白;Preferably, the ferritin derived from bacteria includes Helicobacter pylori ferritin, Escherichia coli ferritin or Pyrococcus furiosus ferritin;
    优选地,所述铁蛋白的来源包括天然提取产物、人工合成产物或基因工程技术产物中的任一种或至少两种的组合;Preferably, the source of the ferritin includes any one or a combination of at least two of natural extraction products, artificial synthesis products, or genetic engineering technology products;
    优选地,所述铁蛋白单体亚基包括突变氨基酸序列;优选地,所述突变氨基酸为半胱氨酸(Cys);更优选地,所述半胱氨酸突变为谷氨酸(Glu)、丝氨酸(Ser)或丙氨酸(Ala);Preferably, the ferritin monomer subunit includes a mutant amino acid sequence; preferably, the mutant amino acid is cysteine (Cys); more preferably, the cysteine is mutated to glutamic acid (Glu) , Serine (Ser) or Alanine (Ala);
    优选地,所述铁蛋白单体亚基是截短突变体;优选地,所述截短突变体是重链铁蛋白单体亚基C端的α-螺旋截短突变体;优选地,所述截短突变体是轻链铁蛋白单体亚基C端的ε螺旋截短突变体。Preferably, the ferritin monomer subunit is a truncation mutant; preferably, the truncation mutant is an α-helical truncation mutant at the C-terminus of the heavy chain ferritin monomer subunit; preferably, the The truncation mutant is an epsilon helix truncation mutant at the C-terminus of the light chain ferritin monomer subunit.
  6. 根据权利要求5所述的纳米颗粒,其包含至少一个所述的铁蛋白单体亚基,优选地,所述铁蛋白单体亚基选自重链铁蛋白单体亚基或轻链铁蛋白单体亚基;优选地,所述重链铁蛋白单体亚基和/或轻链铁蛋白单体亚基形成纳米颗粒,更优选地,所述纳米颗粒包含24个铁蛋白单体亚基,其中重链铁蛋白单体亚基与轻链铁蛋白单体亚基的比例为0:24-24:0;优选地,所述重链铁蛋白单体亚基是人重链铁蛋白单体亚基;优选地,所述轻链铁蛋白单体亚基是人轻链铁蛋白单体亚基;The nanoparticle according to claim 5, which comprises at least one ferritin monomer subunit, preferably, the ferritin monomer subunit is selected from a heavy chain ferritin monomer subunit or a light chain ferritin monomer Body subunit; preferably, the heavy chain ferritin monomer subunit and/or the light chain ferritin monomer subunit form a nanoparticle, and more preferably, the nanoparticle contains 24 ferritin monomer subunits, The ratio of heavy chain ferritin monomer subunits to light chain ferritin monomer subunits is 0:24-24:0; preferably, the heavy chain ferritin monomer subunits are human heavy chain ferritin monomers Subunit; preferably, the light chain ferritin monomer subunit is a human light chain ferritin monomer subunit;
    优选地,所述重链铁蛋白单体亚基包含与SEQ ID NO.5、6、7或8所示氨基酸序列具有80%或以上同一性的氨基酸序列,优选具有85%、90%、95%、96%、97%、98%、99%以上同一性的氨基酸序列,更优选具有98%或99%以上同一性的氨基酸序列;更优选地,所述重链铁蛋白亚基的氨基酸序列如SEQ ID NO.5、6、7或8所示;优选地,所述融合蛋白包含与SEQ ID NO.9、10、11、12、13、14、15、16、17、18或19所示氨基酸序列具有80%或以上同一性的氨基酸序列,优选具有85%、90%、95%、96%、97%、98%、99%以上同一性的氨基酸序列,更优选具有98%或99%以上同一性的氨基酸序列;更优选地,所述融合蛋白的氨基酸序列如SEQ ID NO.9、10、11、12、13、14、15、16、17、18或19所示;Preferably, the heavy chain ferritin monomer subunit comprises an amino acid sequence having 80% or more identity with the amino acid sequence shown in SEQ ID NO. 5, 6, 7 or 8, preferably 85%, 90%, 95% %, 96%, 97%, 98%, 99% or more identical amino acid sequence, more preferably 98% or more 99% identical amino acid sequence; more preferably, the amino acid sequence of the heavy chain ferritin subunit As shown in SEQ ID NO. 5, 6, 7 or 8; preferably, the fusion protein includes the combination with SEQ ID NO. 9, 10, 11, 12, 13, 14, 15, 16, 17, 18 or 19. Shown are amino acid sequences with 80% or more identity, preferably amino acid sequences with 85%, 90%, 95%, 96%, 97%, 98%, 99% identity, and more preferably 98% or 99% identity. Amino acid sequence with more than% identity; more preferably, the amino acid sequence of the fusion protein is shown in SEQ ID NO. 9, 10, 11, 12, 13, 14, 15, 16, 17, 18 or 19;
    优选地,所述轻链铁蛋白亚基包含与SEQ ID NO.20、21、22或23所示氨基酸序列具有80%或以上同一性的氨基酸序列,优选具有85%、90%、95%、96%、97%、98%、99%以上同一性的氨基酸序列,更优选具有98%或99%以上同一性的氨基酸序列;更优选地,所述的轻链铁蛋白亚基的氨基酸序列如SEQ ID NO.20、21、22或23所示;优选地,所述的融合蛋白包含与SEQ ID NO.24、25、26、27、28、29、30、31、32、33或34所示氨基酸序列具有80%或以上同一性的氨基酸序列,优选具有85%、90%、95%、96%、97%、98%、99%以上同一性的氨基酸序列,更优选具有98%或99%以上同一性的氨基酸序列;更优选地,所述的融合蛋白的氨基酸序列如SEQ ID NO.24、25、26、27、28、29、30、31、32、33或34所示。Preferably, the light chain ferritin subunit comprises an amino acid sequence having 80% or more identity with the amino acid sequence shown in SEQ ID NO. 20, 21, 22 or 23, preferably 85%, 90%, 95%, An amino acid sequence with 96%, 97%, 98%, 99% or more identity, more preferably an amino acid sequence with 98% or more identity; more preferably, the amino acid sequence of the light chain ferritin subunit is as SEQ ID NO. 20, 21, 22, or 23; preferably, the fusion protein includes the fusion protein with SEQ ID NO. 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, or 34. Shown are amino acid sequences with 80% or more identity, preferably amino acid sequences with 85%, 90%, 95%, 96%, 97%, 98%, 99% identity, and more preferably 98% or 99% identity. More preferably, the amino acid sequence of the fusion protein is as shown in SEQ ID NO. 24, 25, 26, 27, 28, 29, 30, 31, 32, 33 or 34.
  7. 用于生产权利要求1所述的RBD/ACE2阻遏肽、权利要求2所述的融合蛋白、或权利要求3-6中任一项所述的纳米颗粒的方法,所述方法包括将编码所述RBD/ACE2阻遏肽或所述融合蛋白的一个或多个核酸分子导入细胞中,并在适合于表达所述RBD/ACE2阻遏肽、或表达所述融合蛋白或形成所述纳米颗粒的条件下培养所述细胞。A method for producing the RBD/ACE2 repressor peptide of claim 1, the fusion protein of claim 2, or the nanoparticle of any one of claims 3-6, the method comprising encoding the The RBD/ACE2 repressor peptide or one or more nucleic acid molecules of the fusion protein are introduced into cells, and cultured under conditions suitable for expressing the RBD/ACE2 repressor peptide, or expressing the fusion protein or forming the nanoparticle The cell.
  8. 一种药物组合物,其包含权利要求1所述的RBD/ACE2阻遏肽、权利要求2所述的融合蛋白、权利要求3-6中任一项所述的纳米颗粒或权利要求7所述的方法生产的纳米颗粒;A pharmaceutical composition comprising the RBD/ACE2 repressor peptide according to claim 1, the fusion protein according to claim 2, the nanoparticle according to any one of claims 3-6, or the nanoparticle according to claim 7 Nanoparticles produced by the method;
    优选地,所述药物组合物是针对冠状病毒科病毒的药物;优选地,所述冠状病毒科的病毒选自新型冠状肺炎病毒(SARS-CoV-2)、SARS-CoV、MERS-Cov、229E、NL63、OC43和HKU1;Preferably, the pharmaceutical composition is a drug against coronaviruses of the coronavirus family; preferably, the viruses of the coronavirus family are selected from the group consisting of new coronavirus pneumonia virus (SARS-CoV-2), SARS-CoV, MERS-Cov, 229E , NL63, OC43 and HKU1;
    优选地,所述药物组合物还包含另一种治疗剂;所述另一种治疗剂选自免疫治疗剂或其他抑制冠状病毒科的病毒的药物;Preferably, the pharmaceutical composition further comprises another therapeutic agent; the another therapeutic agent is selected from immunotherapeutic agents or other drugs that inhibit viruses of the coronavirus family;
    优选地,所述冠状病毒科的病毒为新型冠状肺炎病毒(SARS-CoV-2);更优选地,所述 的药物组合物是针对新型冠状肺炎病毒(SARS-CoV-2)的药物。Preferably, the virus of the Coronaviridae family is a novel coronavirus pneumonia virus (SARS-CoV-2); more preferably, the pharmaceutical composition is a drug for a novel coronavirus pneumonia virus (SARS-CoV-2).
  9. 一种SARS-CoV-2表面刺突糖蛋白(S蛋白)拮抗剂,其包含权利要求1所述的RBD/ACE2阻遏肽、权利要求2所述的融合蛋白、权利要求3-6中任一项所述的纳米颗粒或权利要求7所述的方法生产的纳米颗粒,所述阻遏肽、融合蛋白或纳米颗粒通过结合SARS-CoV-2表面刺突糖蛋白(S蛋白)而发挥作用。A SARS-CoV-2 surface spike glycoprotein (S protein) antagonist, comprising the RBD/ACE2 repressor peptide according to claim 1, the fusion protein according to claim 2, and any one of claims 3-6 The nanoparticle according to item or the nanoparticle produced by the method according to claim 7, wherein the repressor peptide, fusion protein or nanoparticle functions by binding to SARS-CoV-2 surface spike glycoprotein (S protein).
  10. 一种生成针对冠状病毒科的病毒的治疗药物的方法,该方法包括:A method for generating therapeutic drugs against viruses of the coronavirus family, the method comprising:
    a)表达权利要求1所述的RBD/ACE2阻遏肽或权利要求2所述的融合蛋白、或形成权利要求3-6中任一项所述的纳米颗粒或权利要求7的方法生产的所述纳米颗粒;和a) Express the RBD/ACE2 repressor peptide of claim 1 or the fusion protein of claim 2, or form the nanoparticle of any one of claims 3-6 or the method produced by the method of claim 7 Nanoparticles; and
    b)回收所述的RBD/ACE2阻遏肽、融合蛋白或纳米颗粒。b) Recover the RBD/ACE2 repressor peptide, fusion protein or nanoparticle.
  11. 一种核酸分子,其包含编码权利要求1所述的RBD/ACE2阻遏肽、权利要求2所述的融合蛋白、权利要求3-6中任一项所述的纳米颗粒或权利要求7的方法生产的所述纳米颗粒的核酸序列;A nucleic acid molecule comprising encoding the RBD/ACE2 repressor peptide of claim 1, the fusion protein of claim 2, the nanoparticle of any one of claims 3-6, or the method of claim 7 The nucleic acid sequence of the nanoparticle;
    优选地,所述核酸序列包含与SEQ ID NO.35、36或37所示核苷酸序列具有80%或以上同一性的核苷酸序列,优选具有85%、90%、95%、96%、97%、98%、99%以上同一性的核苷酸序列,更优选具有98%或99%以上同一性的核苷酸序列;更优选地,所述核酸序列如SEQ ID NO.35、36或37所示;Preferably, the nucleic acid sequence comprises a nucleotide sequence having 80% or more identity with the nucleotide sequence shown in SEQ ID NO. 35, 36 or 37, preferably 85%, 90%, 95%, 96% , 97%, 98%, 99% or more identical nucleotide sequences, more preferably 98% or more 99% identical nucleotide sequences; more preferably, the nucleic acid sequence is as SEQ ID NO. 35, As shown in 36 or 37;
    优选地,所述核酸分子是密码子优化的核酸分子。Preferably, the nucleic acid molecule is a codon-optimized nucleic acid molecule.
  12. 表达构建体,其包含权利要求11的核酸分子。An expression construct comprising the nucleic acid molecule of claim 11.
  13. 一种重组细胞,其包含权利要求11所述的核酸分子或权利要求12所述的表达构建体。A recombinant cell comprising the nucleic acid molecule of claim 11 or the expression construct of claim 12.
  14. 权利要求1所述的RBD/ACE2阻遏肽、权利要求2所述的融合蛋白、权利要求3-6中任一项所述的纳米颗粒或权利要求7的方法生产的所述纳米颗粒、权利要求8所述的药物组合物、权利要求9所述的SARS-CoV-2表面刺突糖蛋白(S蛋白)拮抗剂或权利要求10的方法生产的治疗药物、权利要求11所述的核酸分子、权利要求12所述的表达构建体、权利要求13所述的重组细胞在制备S蛋白抑制剂、ACE2与S蛋白结合的竞争性抑制剂中的用途、或在制备预防和/或治疗冠状病毒科病毒感染或由所述冠状病毒科病毒感染引起的疾病的药物中的用途;优选地,所述冠状病毒科病毒感染引起的疾病是由新型冠状病毒感染引起的疾病,尤其是新型冠状病毒肺炎。The RBD/ACE2 repressor peptide of claim 1, the fusion protein of claim 2, the nanoparticle of any one of claims 3-6, or the nanoparticle produced by the method of claim 7, claim The pharmaceutical composition according to claim 8, the SARS-CoV-2 surface spike glycoprotein (S protein) antagonist according to claim 9, or the therapeutic drug produced by the method according to claim 10, the nucleic acid molecule according to claim 11, Use of the expression construct of claim 12, the recombinant cell of claim 13 in the preparation of an S protein inhibitor, a competitive inhibitor of the binding of ACE2 and S protein, or in the preparation of prevention and/or treatment of coronaviruses Virus infection or use in medicine for diseases caused by the coronavirus infection; preferably, the disease caused by the coronavirus infection is a disease caused by a novel coronavirus infection, especially a novel coronavirus pneumonia.
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Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN112851825A (en) * 2021-02-10 2021-05-28 军事科学院军事医学研究院军事兽医研究所 Recombinant ferritin nanoparticle for expressing novel coronavirus RBD and construction method thereof

Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN108379240A (en) * 2018-03-09 2018-08-10 华东理工大学 Anti- EGFR scFv::The application of FTH1/FTH1 protein nanos particle in medicine preparation
CN108976299A (en) * 2017-06-05 2018-12-11 昆山新蕴达生物科技有限公司 A method of improving antibody fragment affinity and Half-life in vivo

Patent Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN108976299A (en) * 2017-06-05 2018-12-11 昆山新蕴达生物科技有限公司 A method of improving antibody fragment affinity and Half-life in vivo
CN108379240A (en) * 2018-03-09 2018-08-10 华东理工大学 Anti- EGFR scFv::The application of FTH1/FTH1 protein nanos particle in medicine preparation

Non-Patent Citations (4)

* Cited by examiner, † Cited by third party
Title
HAN, D.P. ; PENN-NICHOLSON, A. ; CHO, M.W.: "Identification of critical determinants on ACE2 for SARS-CoV entry and development of a potent entry inhibitor", VIROLOGY, vol. 350, no. 1, 20 June 2006 (2006-06-20), AMSTERDAM, NL , pages 15 - 25, XP024896563, ISSN: 0042-6822, DOI: 10.1016/j.virol.2006.01.029 *
JAE OG JEON, SOYOUN KIM, EUNSU CHOI, KIHYUK SHIN, KIWEON CHA, IN-SEOP SO, SUN-JI KIM, EUNSUNG JUN, DOHEE KIM, HYUNG JUN AHN, BYUNG: "Designed Nanocage Displaying Ligand-Specific Peptide Bunches for High Affinity and Biological Activity", ACS NANO, vol. 7, no. 9, 24 September 2013 (2013-09-24), US , pages 7462 - 7471, XP055589105, ISSN: 1936-0851, DOI: 10.1021/nn403184u *
LUPALA CECYLIA S., KUMAR VIKASH, LI XUANXUAN, SU XIAO-DONG, LIU HAIGUANG: "Computational analysis on the ACE2-derived peptides for neutralizing the ACE2 binding to the spike protein of SARS-CoV-2", BIORXIV, 4 May 2020 (2020-05-04), pages 1 - 27, XP055799136, DOI: 10.1101/2020.05.03.075473 *
ZHANG, G. ET AL.: "The first-in-class peptide binder to the SARS-Cov-2 spike protein.", BIORXIV: 2020.03.19.999318V1, 20 March 2020 (2020-03-20), XP055759391 *

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN112851825A (en) * 2021-02-10 2021-05-28 军事科学院军事医学研究院军事兽医研究所 Recombinant ferritin nanoparticle for expressing novel coronavirus RBD and construction method thereof

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