WO2021087897A1 - 基于bodipy的高效实时生物硫醇荧光检测探针 - Google Patents
基于bodipy的高效实时生物硫醇荧光检测探针 Download PDFInfo
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- WO2021087897A1 WO2021087897A1 PCT/CN2019/116374 CN2019116374W WO2021087897A1 WO 2021087897 A1 WO2021087897 A1 WO 2021087897A1 CN 2019116374 W CN2019116374 W CN 2019116374W WO 2021087897 A1 WO2021087897 A1 WO 2021087897A1
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- fluoroboron
- synthesis
- dichloromethane
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- C07F—ACYCLIC, CARBOCYCLIC OR HETEROCYCLIC COMPOUNDS CONTAINING ELEMENTS OTHER THAN CARBON, HYDROGEN, HALOGEN, OXYGEN, NITROGEN, SULFUR, SELENIUM OR TELLURIUM
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- C07F9/6596—Heterocyclic compounds, e.g. containing phosphorus as a ring hetero atom having atoms other than oxygen, sulfur, selenium, tellurium, nitrogen or phosphorus as ring hetero atoms
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-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N21/00—Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
- G01N21/62—Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
- G01N21/63—Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
- G01N21/64—Fluorescence; Phosphorescence
Definitions
- the invention relates to a BODIPY-based high-efficiency real-time biological thiol fluorescence detection probe, and also relates to a preparation method and application of the probe, and belongs to the technical field of organic small molecule fluorescence probes.
- fluorescence analysis technology has played an irreplaceable role in the field of biological analysis due to its high detection sensitivity, better selectivity, easy operation, low cost and other advantages.
- the most critical part of the fluorescence analysis technology is the fluorescent dye.
- the performance of the fluorescent dye directly affects the sensitivity and accuracy of the probe detection. Therefore, research on fluorescent dyes suitable for fluorescent labeling and development of excellent fluorescent probes will be crucial to the development of bioanalytical technology and life science research.
- fluorescent dyes Due to the diversity of dye properties, different dyes show great differences in the biological detection and analysis process. Not all fluorescent dyes can be used as fluorophores for fluorescent probes and applied in the fields of biochemical analysis and biological detection.
- the fluorescent dyes that have been successfully applied in the prior art include: coumarin-based fluorescent dyes, which have many advantages such as good light stability, large Stokes shift, good oil solubility, and relatively small molecular volume.
- the main properties of coumarin dyes are The disadvantage is that the absorption and emission wavelength is too short, most of which are blue fluorescence, and the unsaturated lactone structure of the coumarin dye will undergo a hydrolysis reaction in the dilute lye, which limits its application.
- Naphthimide dyes can interact with DNA and are an excellent DNA intercalator with high quantum yield and good photostability. They are very useful biomarkers. However, the naphthalimide dyes are lighter in color and have a low molar extinction coefficient, which limits their application. Fluorescein and rhodamine dyes, this type of fluorescent dyes are characterized by good water solubility, good light stability, relatively long absorption and emission wavelength, and high quantum yield; but due to the presence of amino groups and hydroxyl groups in the dye, the dye It is more sensitive to pH, and when used as ion or biomolecular probes, it has certain requirements for the pH of the working environment.
- Cyanine dyes have been successfully used to detect DNA, nucleotides, proteins and other fluorescent probes.
- the disadvantage of this type of dye is poor light stability.
- the polymethine structure is prone to oxidative fracture under light, which leads to the decomposition of the dye.
- polymethine The structure also causes the dye to accumulate easily, which affects the promotion of the dye in application.
- BODIPY dyes are dyes with superior performance due to their good photochemical stability, high molar extinction coefficient, high fluorescence quantum yield, easy modification of molecular structure, and narrow half-peak width of the fluorescence spectrum. , It has many advantages such as good resistance to solvent polarity and pH, and is widely used in the fields of optoelectronic devices, biomarkers and fluorescent probes.
- Biothiols mainly include cysteine (Cys), homocysteine (Hcy) and glutathione (GSH), which play a vital role in biological systems.
- the metabolism and transportation of thiol substances in biological systems are closely related to a series of important enzymes and proteins.
- Abnormal intracellular thiol levels are associated with many diseases, such as white blood cell loss, psoriasis, liver damage and AIDS. Therefore, it is of great significance to design and synthesize fluorescent probes with high selectivity, high sensitivity and real-time rapid response to biological thiols.
- the most significant feature of biothiols is that they contain strong nucleophilic sulfhydryl groups.
- the currently reported biological thiol fluorescent probes are mainly based on the Michael addition reaction, metal complex replacement, cyclization addition to aldehydes, and disulfide bond reduction mechanisms.
- the thiol probe based on the Michael addition reaction has attracted wide attention due to its high sensitivity and the ability to detect thiol under near-physiological conditions.
- most of these types of probes have problems such as long response time to thiols, which generally range from a few minutes to several hours, which is not conducive to the real-time quantitative detection of thiols.
- the main problem of the existing real-time response type biological thiol ratio fluorescent probe is that there is no organelle targeting function and the Stokes shift is small, which leads to serious fluorescence self-quenching and Rayleigh scattering, which cause detection errors.
- an object of the present invention is to provide a ratio-type fluorescent probe for rapid and real-time detection of biological thiols.
- the structural formula of the probe is a compound represented by the following formula (I):
- R1 is selected from hydrogen, formula (III), and formula (IV);
- R2 or R3 is selected from formula (II);
- R4 or R5 is selected from methyl;
- R4 or R5 is selected from hydrogen
- the R7 is Cl.
- the structure of the probe is selected from the following:
- the R7 is Cl.
- Another object of the present invention is to provide a method for preparing a ratio fluorescent probe for rapid and real-time detection of biological thiols, which includes the following steps:
- the synthesis method of the step (1) includes: adding the intermediate dye fluoroboron dipyrromethene-simplified (BOD-J) and fluoroboron dipyrromethene to anhydrous N,N-dimethylformamide (DMF) -Alkyne (BOD-Q) or fluoroboron dipyrromethene-azid (BOD-D), and 3,5-dimethylbenzaldehyde, after deoxygenation, add piperidine and glacial acetic acid, stir at room temperature and place in microwave Reaction in the reactor.
- BOD-J intermediate dye fluoroboron dipyrromethene-simplified
- DMF N,N-dimethylformamide
- BOD-Q alkyne
- BOD-D fluoroboron dipyrromethene-azid
- 3,5-dimethylbenzaldehyde 3,5-dimethylbenzaldehyde
- the step (2) includes the dye fluoroboron dipyrromethoxine-aldehyde (BOD-JQ), fluoroboron dipyrromethoxine-acetylene aldehyde (BOD-QQ) and/or the dye fluoroboron dipyrromethoxine-azide (BOD-QQ). -DQ) synthesis;
- the organelle is mitochondria or endoplasmic reticulum.
- the method for synthesizing BOD-JQ, BOD-QQ or BOD-DQ in the above method includes: dissolving the dye BOD-JS, BOD-QS or BOD-DS in dichloromethane, and then adding 50-500 mesh Silica gel, rotary evaporate the solvent under reduced pressure, and place the mixture under the xenon lamp to illuminate. It can be observed that the mixture changes from dark green to purple-black. After the mixture is cooled to room temperature, it is extracted several times with dichloromethane, and the organic phases are combined.
- the above method also includes the synthesis of intermediate dyes
- the intermediate dyes are fluoroboron dipyrromethene-simplified (BOD-J), intermediate acetylenic aldehyde (QQ), fluoroboron dipyrromethene-alkynes (BOD-Q) , Intermediate bromoaldehyde (XQ), intermediate azide (DQ) and fluoroboron dipyrromethene-azid (BOD-D).
- the organelle-targeting fluorescent dye synthesis step in the above method includes:
- the filtrate was distilled under reduced pressure to remove excess organic solvent, and the obtained crude product was dissolved in a small amount of dichloromethane and then subjected to silica gel column chromatography, gradient elution for separation and purification, and finally powder was obtained; the organelles were mitochondria.
- the organelle-targeting fluorescent dye synthesis step in the above method includes:
- Another object of the present invention is to provide an application of a ratio-based fluorescent probe for rapid and real-time detection of biological thiols, the application being selected from one of the following (1)-(4):
- the biological thiols are preferably cysteine (Cys), homocysteine (Hcy) and/or glutathione (GSH);
- the biological thiol detection in the above application is carried out under alkaline conditions, preferably the pH is 7.2-8.0, and more preferably the pH is 7.4.
- the organelle in the above application is endoplasmic reticulum and/or mitochondria.
- the present invention has the following beneficial effects:
- the present invention develops a ratio fluorescent probe for rapid and real-time detection of biological thiols.
- Spectral test results show that the probe has the advantages of ratiometric response, high selectivity, high sensitivity, fast response time and large Stokes shift to biological thiols.
- the probe Compared with most biological thiol fluorescent probes, the probe’s response time to biological thiols has the characteristics of real-time and rapid speed. This advantage enables it to meet the needs of high-throughput detection of biological thiols.
- the ratio response mechanism of the probe can effectively compensate for the OFF/ON type.
- this probe has organelle targeting functions, such as mitochondrial targeting: when the mitochondrial membrane potential in vitro is 180-200mV, the inner side is negatively charged, and it is negative in living cells and the body. The internal content is slightly lower, 130-150mV, and lipophilic cations are used for drug delivery.
- organelle targeting functions such as mitochondrial targeting: when the mitochondrial membrane potential in vitro is 180-200mV, the inner side is negatively charged, and it is negative in living cells and the body. The internal content is slightly lower, 130-150mV, and lipophilic cations are used for drug delivery.
- the most successful research is triphenylphosphine. Triphenylphosphine contains three benzene rings to increase the surface area of the molecule and form a delocalized positive charge.
- the endoplasmic reticulum targeting the presence of the chlorine atom functional group realizes its specific binding with the chloride ion pump of the endoplasmic reticulum, thereby completing the positioning of the endoplasmic reticulum, and
- the Stokes shift is larger, and the Stokes shift of the probe of the present invention also reaches 52 nm, which is about 13 nm higher than the maximum Stokes shift reported so far.
- the color of the probe solution changes from pink to light yellow after encountering biological thiols in vitro, which can be used for visual naked eye detection. This also provides a new idea for the design of synthetic ratio-type biological thiol fluorescent probes.
- Figure 1 The route of probe synthesis, specifically the synthesis of aldehyde BODIPY.
- Figure 37 Reaction of Cys/Hcy with a probe based on an aldehyde group as a recognition group.
- BODIPY fluoroboron dipyrromethene
- the QQ synthesis route is shown in Figure 4.
- p-hydroxybenzaldehyde (6.1g, 50mmol) and anhydrous potassium carbonate (9.7g, 70mmol)
- anhydrous potassium carbonate (9.7g, 70mmol)
- 3-bromopropyne 11.1mL, 100mmol
- the solvent was distilled off under reduced pressure.
- the crude product was dissolved in water and extracted with ethyl acetate (4 ⁇ 75 mL). The organic phases were combined and washed with saturated brine and water several times. After the organic phase was dried over anhydrous magnesium sulfate, the filtrate was filtered and distilled under reduced pressure to remove excess organic solvent.
- the obtained crude product was dissolved in a small amount of dichloromethane and separated and purified by silica gel column chromatography (petroleum ether/chloroform as the eluent) gradient elution, and finally 7.8 g of light yellow powder was obtained, and the yield was 98%.
- reaction was placed in an ice bath, and 6 mL of triethylamine and 6 mL of boron trifluoride ether were slowly added dropwise after 15 minutes, and stirring was continued for 2 hours. After the reaction is over, add 200 mL of water, shake vigorously for 5 min, collect the organic layer, and wash the organic layer with saturated saline and water three times in sequence. Subsequently, the organic layer was dried with anhydrous magnesium sulfate, and the filtrate was filtered and distilled under reduced pressure to remove excess organic solvent.
- the obtained crude product was dissolved in a small amount of dichloromethane and separated and purified by silica gel column chromatography (petroleum ether/dichloromethane as the eluent) gradient elution, and finally 0.57 g of purple powder was obtained, and the yield was 24%.
- BOD-QS The synthesis route of BOD-QS is shown in Figure 6.
- the synthesis method and parameter conditions are the same as those of BOD-JS.
- BOD-Q (113mg, 0.3mmol) is added to obtain golden yellow powder BOD-QS 178mg, yield 97% .
- DQ (1.26g, 5.5mmol) and sodium azide (0.45g, 6.0mmol) were added to 40mL of anhydrous DMSO, and heated to reflux for 2h. After the reaction is completed and cooled, it is diluted with dichloromethane, then the organic phase is washed several times with saturated brine and water, and finally the organic layer is dried with anhydrous sodium sulfate. After filtration, the filtrate was distilled under reduced pressure to remove excess organic solvent.
- the obtained crude product was dissolved in a small amount of dichloromethane and separated and purified by silica gel column chromatography (petroleum ether/ethyl acetate as the eluent) gradient elution, and finally 0.82 g of light yellow powder was obtained, and the yield was 80%.
- BOD-DS The synthesis route of BOD-DS is shown in Figure 10.
- the synthesis method and parameters are the same as those of BOD-JS synthesis.
- BOD-D (123mg, 0.3mmol) is added to obtain golden yellow powder BOD-QS 188mg, with a yield of 98%.
- BOD-QQ The synthesis route of BOD-QQ is shown in Figure 15.
- the synthesis method and its parameter conditions are the same as those of BOD-JQ synthesis.
- BOD-QS (0.1 mmol, 61 mg) is added to obtain 37 mg of product with a yield of 72%.
- the results of BOD-QQ characterization are shown in Figure 16-18:
- BOD-DQ The synthesis route of BOD-DQ is shown in Figure 19, and its synthesis method and its parameter conditions are the same as those of BOD-JQ synthesis.
- BOD-DS (0.1 mmol, 64 mg) is added to obtain 38 mg of product with a yield rate of 70%.
- the BOD-DQ characterization results are shown in Figure 20-22:
- BOD-PPh3 The synthetic route of BOD-PPh3 is shown in Figure 23.
- BOD-QQ 50.8mg, 0.1mmol
- (4-azidobutyl)triphenylphosphonium bromide (43.9mg, 0.1mmol) are dissolved
- copper sulfate pentahydrate 25mg, 0.1mmol
- sodium ascorbate (19.8mg, 0.1mmol
- BOD-Cl The synthesis route of BOD-Cl is shown in Figure 27.
- BOD-QQ 50.8 mg, 0.1 mmol
- reaction was placed in an ice bath, and 20 mL of triethylamine and 20 mL of boron trifluoride ether were slowly added dropwise after 15 minutes, and stirring was continued for 2 hours. After the reaction is over, add 200 mL of water, shake vigorously for 5 min, extract with dichloromethane, collect the organic layer, and wash the organic layer with saturated brine and water three times in sequence. Subsequently, the organic layer was dried with anhydrous sodium sulfate, and the filtrate was filtered under reduced pressure to remove excess organic solvent.
- the preparation method of the mother liquor Prepare the probe molecule BOD-JQ with tetrahydrofuran (THF) into a standard solution of 10 -3 mol L -1 and place it at 4°C for later use.
- THF tetrahydrofuran
- the sensitivity of the probe to GSH detection (R/R 0 ) is the largest when the pH is 7.4, so the pH value used in subsequent experiments is all 7.4.
- the concentration of glutathione in the cell is 1-10 mM, so the probe can meet the detection requirements of glutathione in general biological systems.
- BOD-JQ has a similar response effect to Cys and Hcy, although the concentration of Cys and Hcy in the cells is relatively low, generally 30-200 ⁇ M and 5-15 ⁇ M.
- the probe BOD-JQ is a probe for detecting the total concentration of biological thiols in biological systems.
- the total concentration of three common biological thiols is at the mM level, so the sensitivity of the probe can meet the requirements of biological systems in general biological systems. Demand for detection of mercaptans.
- the concentration of the probe molecule is 5 ⁇ M, and 100 equivalents of AA are added to each sample. Ala, Arg, Glu, Gly, His, Leu, Phe, Trp, Val, Cys, Hcy and GSH, and measure the changes before and after the fluorescence spectrum.
- the concentration of the probe molecule is 5 ⁇ M, and 100 equivalents of GSH solution are added to each sample. And add 100 equivalents of AA, Ala, Arg, Glu, Gly, His, Leu, Phe, Trp and Val respectively, and measure the changes before and after the fluorescence spectrum to investigate the fluorescence spectrum response of the probe when GSH coexists with other substances.
- the product was reasonably inferred by the change of the system spectrum after adding GSH solution, and the reaction product was identified by high-resolution mass spectrometry.
- the sulfhydryl group of the biothiol can still selectively carry out Michael addition with the olefin of the recognition group or reduce the disulfide bond without interacting with the aldehyde group. Because the probe is very sensitive to the detection of sulfhydryl compounds, and there may be fewer products after the probe interacts with sulfhydryl groups, we have not obtained more intuitive evidence such as mass spectrometry to prove the mechanism.
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Abstract
Description
Claims (10)
- 权利要求1或2所述的探针的制备方法,包括如下步骤:(1)染料氟硼二吡咯甲川-简双(BOD-JS)、氟硼二吡咯甲川-炔双(BOD-QS)和氟硼二吡咯甲川-叠双(BOD-DS)的合成;(2)固相光化学合成α-甲酰化BODIPY衍生物;(3)细胞器靶向荧光染料合成;其中,所述步骤(1)的合成方法包括:向无水N,N-二甲基甲酰胺(DMF)中加入中间染料氟硼二吡咯甲川-简(BOD-J)、氟硼二吡咯甲川-炔(BOD-Q)或氟硼二吡咯甲川-叠(BOD-D),以及3,5-二甲基苯甲醛,除氧后,加入哌啶和冰醋酸,室温搅拌后,置于微波反应器中反应。待反应结束后,将冷却的反应液倾入二氯甲烷中,并分别用饱和食盐水和水洗涤数次,随后用无水硫酸镁干燥有机层,过滤后滤液经减压蒸馏除去多余的有机溶剂,所得 粗产物用少量二氯甲烷溶解后经硅胶柱层析,梯度洗脱进行分离提纯,最后得到BOD-JS、BOD-QS或BOD-DS粉末;所述步骤(2)包括,染料氟硼二吡咯甲川-简醛(BOD-JQ)、氟硼二吡咯甲川-炔醛(BOD-QQ)和/或染料氟硼二吡咯甲川-叠醛(BOD-DQ)的合成;所述步骤(3)中所述细胞器为线粒体或内质网。
- 根据权利要求3所述的方法,所述BOD-JQ、BOD-QQ或BOD-DQ的合成方法包括:将染料BOD-JS、BOD-QS或BOD-DS溶解于二氯甲烷中,然后加入50-500目硅胶,经减压旋转蒸发溶剂,并将混合物置于氙气灯下方处光照,可观察到混合物由墨绿色变为紫黑色,待混合物冷却至室温后,用二氯甲烷萃取数次,合并有机相,经减压蒸馏除去多余有机溶剂,所得粗产物用少量二氯甲烷溶解后经硅胶柱层析,梯度洗脱进行分离提纯,最后得到粉末。
- 根据权利要求3所述的方法,还包括中间染料的合成,所述中间染料为氟硼二吡咯甲川-简(BOD-J)、中间体炔醛(QQ)、氟硼二吡咯甲川-炔(BOD-Q)、中间体溴醛(XQ)、中间体叠醛(DQ)和氟硼二吡咯甲川-叠(BOD-D)。
- 根据权利要求3所述的方法,所述细胞器靶向荧光染料合成步骤包括:在氮气保护下,将BOD-QQ以及(4-叠氮丁基)三苯基溴化膦溶于混合溶剂中,随后加入五水合硫酸铜和抗坏血酸钠,用锡箔纸包住避光,室温搅拌反应,待反应结束后,加入水,剧烈震荡,用二氯甲烷萃取,收集有机层,并将有机层用饱和食盐水和水依次洗涤数次,随后用无水硫酸钠干燥有机层,过滤后滤液经减压蒸馏除去多余的有机溶剂,所得粗产物用少量二氯甲烷溶解后经硅胶柱层析,梯度洗脱进行分离提纯,最后得到粉末;所述细胞器为线粒体。
- 根据权利要求3所述的方法,所述细胞器靶向荧光染料合成步骤包括:在氮气保护下,将BOD-QQ以及1-叠氮-3-氯丙烷溶于混合溶剂中,随后加入五水合硫酸铜和抗坏血酸钠,用锡箔纸包住避光,室温搅拌反应;待反应结束后,加入水,剧烈震荡, 用二氯甲烷萃取,收集有机层,并将有机层用饱和食盐水和水依次洗涤数次;随后用无水硫酸钠干燥有机层,过滤后滤液经减压蒸馏除去多余的有机溶剂;所得粗产物用少量二氯甲烷溶解后经硅胶柱层析,梯度洗脱进行分离提纯,最后得到粉末。
- 权利要求1或2所述的探针的应用,所述应用选自如下(1)-(4)之一:(1)在生物硫醇检测中的应用,所述生物硫醇优选为半胱氨酸(Cys)、高半胱氨酸(Hcy)和/或谷胱甘肽(GSH);(2)在细胞成像中的应用;(3)在制备生物硫醇检测或细胞成像的试剂或试剂盒中的应用;(4)在细胞器检测中的应用。
- 根据权利要求8所述的应用,所述生物硫醇检测是在偏碱性条件下进行,优选pH为7.2-8.0,更优选pH为7.4。
- 根据权利要求8所述的应用,所述细胞器为内质网和/或线粒体。
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