WO2020199612A1 - Method for increasing enzyme activity of highly recombinant dye decolorizing peroxidase - Google Patents

Method for increasing enzyme activity of highly recombinant dye decolorizing peroxidase Download PDF

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WO2020199612A1
WO2020199612A1 PCT/CN2019/120475 CN2019120475W WO2020199612A1 WO 2020199612 A1 WO2020199612 A1 WO 2020199612A1 CN 2019120475 W CN2019120475 W CN 2019120475W WO 2020199612 A1 WO2020199612 A1 WO 2020199612A1
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dyp
peroxidase
medium
heme
dye
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PCT/CN2019/120475
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Chinese (zh)
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唐蕾
朱竹兵
孙亚武
顾鹏帅
沈微
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江南大学
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    • C12R2001/185Escherichia
    • C12R2001/19Escherichia coli

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  • the invention relates to a method for improving the enzymatic activity of recombined dye decolorization peroxidase, and belongs to the technical field of bioengineering.
  • Dye decoloring peroxidase is a new member of the peroxidase family. It uses heme as a prosthetic group and uses hydrogen peroxide as an electron acceptor to catalyze various organics. It can be used as anthraquinone dyes and lignin model compounds.
  • the substrate has potential application value, which can realize the degradation of dye wastewater by biological method, thereby avoiding the secondary pollution problem of degradation by chemical and physical methods.
  • DyP is mainly derived from microorganisms, but DyP obtained from primitive bacteria is not only low in content, but also difficult to separate from other intracellular proteins. Therefore, DyP is often produced by the method of constructing genetic engineering bacteria, such as heterologous expression of DyP in E. coli , But the content of recombinant protein is low, generally below 10mg/L. Recent studies have found that DyP and modified protein fusion expression, the amount of recombinant protein can be increased to about 200mg/L, but the highly overexpressed fusion DyP has almost no activity.
  • Adding 5-ALA to the culture medium is another way to increase the yield of DyP, but the cost is high and it is not suitable for large-scale promotion and application.
  • An object of the present invention is to provide a method for improving the enzyme activity of recombinant DyP, the method being the following (1) and/or (2):
  • the final concentration of Glu and/or Fe 2+ added is 20-100 ⁇ mol/L.
  • the final concentration of added Glu and/or Fe 2+ is 40-100 ⁇ mol/L.
  • the final concentration of the added Glu and/or Fe 2+ is 60-100 ⁇ mol/L.
  • the amino acid sequence of the DyP is the sequence shown in GenBank numbering AAZ57111.1 and UniProtKB/Swiss-Prot numbering Q47KB1.
  • the recombinant strain uses a pET series vector as a vector.
  • the fermentation conditions are: after seed culture, transfer to LB medium with an inoculum of 1-5% (v/v), 200-220r/min, 35- Cultivate at 38°C until the OD 600 of the bacteria reaches 0.6-0.8, add IPTG to the medium at a final concentration of 0.1-0.5mmol/L, and induce culture at 28-30°C for 12-20 hours.
  • the seed culture is to inoculate the recombinant strain into the LB medium, and cultivate for 10-15 hours at 200-220 r/min at 35-38°C.
  • the formula of LB medium is: tryptone 10g/L, yeast extract 5g/L, and sodium chloride 10g/L.
  • the E. coli is E. coli BL21 (DE3).
  • the co-expression uses pET-28a as an expression vector.
  • the second purpose of the present invention is to provide a genetically engineered bacteria that co-expresses the gene encoding DyP and the key enzyme gene heme in the heme synthesis pathway in Escherichia coli.
  • the amino acid sequence of the DyP is as shown in GenBank numbering AAZ57111.1
  • the sequence shown, the amino acid sequence of the key enzyme of the heme synthesis pathway is the sequence shown in GenBank numbering CAQ31712.1.
  • the third objective of the present invention is to provide a method for producing DyP, which is to first co-express the gene encoding DyP and the key enzyme gene heme synthesis pathway heme in E. coli, and then use the co-expressed strain to ferment to produce DyP.
  • the amino acid sequence of DyP is the sequence shown in GenBank numbering AAZ57111.1
  • the amino acid sequence of the key enzyme in the heme synthesis pathway is the sequence shown in GenBank numbering CAQ31712.1.
  • the fermentation conditions are to activate the co-expressed strain at 35-38°C, 200-220r/min for 8-14h, and then press 1-5% inoculum (V/V ) Transfer to LB medium, culture until the OD 600 value of the bacteria is 0.6-0.8, add IPTG at a final concentration of 0.1-1 mmol/L, and induce 6-10 hours at 35-38°C.
  • the fermentation medium is LB medium.
  • the fourth object of the present invention is to provide a method for decolorizing Reactive Blue 19, which uses Reactive Blue 19 as a substrate and adds the protein expressed by the genetically engineered bacteria.
  • the decolorization reaction system includes 20 mmol/L acetate buffer, 0.1-0.3 mmol/L final concentration of reactive blue 19, and 180-220 ⁇ g of the protein expressed by the genetically engineered bacteria. , H 2 O 2 with a final concentration of 0.02-0.2 mmol/L.
  • Another object of the present invention is to provide the application of the above method in the biological, textile or chemical fields.
  • the invention provides a method for improving the enzyme activity of recombinant DyP.
  • exogenous substances Glu and/or Fe 2+ By adding exogenous substances Glu and/or Fe 2+ to the fermentation medium, the heme saturation in recombinant DyP is increased.
  • the specific enzyme activity can be increased to 1.37 times that of the control; when adding 80 ⁇ mol/L of FeCl 2 to the medium, the enzyme activity can be increased to that of the control 1.45 times.
  • the method is simple and easy to operate, and the added foreign substances such as Glu and FeCl 2 are cheap and economical.
  • the intracellular hemoglobin content is greatly increased: after the recombinant bacteria are induced at 37°C and 0.3mmol/L IPTG, the intracellular hemoglobin test is performed.
  • the heme concentration in the strain pD is 3.4 ⁇ mol/L, and the co-expressing strain pAD
  • the concentration of heme in the medium increased significantly, reaching 9.8 ⁇ mol/L; adding 20 ⁇ mol/L FeCl 2 and 40 ⁇ mol/L Glu to the culture medium of the strain pAD further increased the concentration of heme to 11.3 ⁇ mol/L and 13.5 ⁇ mol/L;
  • DyP binds more heme: the heme and protein content of DyP is expressed by 408nm (Soret peak) and 280nm wavelength. Soret peak is the characteristic absorption peak of heme, which can be used to characterize the level of heme incorporated into DyP. Except for the strains containing empty plasmids, all other strains showed a Soret peak at 408nm; the analysis peak showed that compared with pD strain 0.637, the co-expression strain pAD was 0.794. It can be seen that the DyP gene and the heme synthesis pathway key enzyme gene heMA Co-expression enhances the binding degree of Dyp and cofactor heme. Exogenous addition of 20 ⁇ mol/L FeCl 2 and 40 ⁇ mol/L Glu respectively increases the peak at 408nm to 0.865 and 0.889;
  • the Dyp enzyme activity was measured with 2,2-diazo-bis(3-ethyl-benzothiazole-6-sulfonic acid) diammonium salt (ABTS) as a substrate: the Dyp enzyme activity of strain pD was 4.5 U /mg, while the pAD enzyme activity of the co-expression strain reached 9.2U/mg, which was 1.1 times higher than the original. Adding 20 ⁇ mol/L FeCl 2 and 40 ⁇ mol/L Glu separately, the enzyme activity increased to 11.8U/mg, 13.2U/mg .
  • ABTS 2,2-diazo-bis(3-ethyl-benzothiazole-6-sulfonic acid) diammonium salt
  • Figure 1 The effects of metal ions and amino acids on cell mass and recombinant DyP enzyme activity.
  • Figure 2 The effect of additives on enzyme activity and heme saturation.
  • Figure 4 The effect of various strains and additives on the content of recombinant DyP heme.
  • Figure 5 The effects of various strains and additives on the spectral absorption of recombinant DyP.
  • Figure 6 The effects of strains and additives on the level of recombinant DyP enzyme activity.
  • DyP dye decolorizing peroxidase
  • H 2 O 2 hydrogen peroxide
  • Strain pD a strain co-expressing the dye decolorizing peroxidase gene
  • Strain pAD a strain that co-expresses the dye decoloring peroxidase gene and the key enzyme gene heme in the heme synthesis pathway;
  • Strain pAD FeCl 2
  • Strain pAD (Glu): Co-express the dye decoloring peroxidase gene with hema, a key enzyme gene in the heme synthesis pathway, and add Glu exogenously;
  • OD 600 absorbance value at a wavelength of 600nm
  • CoCl 2 Cobalt chloride
  • MnCl 2 Manganese chloride
  • 5-ALA 5-aminolevulinic acid.
  • the full-length DyP protein sequence (GenBank numbering AAZ57111.1) was obtained using GenBank database, and the target gene encoding the protein was synthesized.
  • plasmid pET-28a(+) as a vector, through restriction digestion and ligation, a recombinant plasmid containing the target gene was synthesized.
  • the recombinant plasmid containing the target gene was transformed into E. coli BL21 for heterologous expression, and a recombinant strain was obtained.
  • the recombinant strain was inoculated into LB medium containing kanamycin, cultured at 200r/min, 37°C for 12h, and transferred to a 500mL shake flask containing 100mL of fresh LB medium at 4% (v/v) inoculum , And cultivate under the same conditions until the OD 600 of the bacteria reaches 0.6-0.8.
  • IPTG isopropyl- ⁇ -D-thiogalactopyranoside
  • Glu 100 ⁇ mol/L Glu, FeCl 2 , CoCl 2 , MnCl 2 , Glu+FeCl 2 were added to the culture medium, the final concentration of IPTG added was 0.3 mmol/L, and the culture was induced at 30°C for 14 hours.
  • the cells were collected and centrifuged. Suspend, break, centrifuge, collect the supernatant and pass through a 0.22 ⁇ m aqueous membrane to obtain the crude enzyme solution, which is separated and purified by a 1mL His Trap TM HP affinity nickel column, and linearly eluted with 10 column volumes of elution buffer.
  • the target protein performs full-wavelength scanning and hemoglobin saturation calculation.
  • Heme saturation is defined as the ratio of absorbance at 408nm to 280nm, that is, A 408 /A 280 .
  • IPTG IPTG to a final concentration of 0.3mmol/L
  • induce culture at 30°C for 14h collect the bacteria by centrifugation, suspension, breakage, centrifugation, collect the supernatant and pass through 0.22 ⁇ m water filter membrane to obtain the crude enzyme solution, pass 1mL His Trap TM HP affinity nickel column separation and purification, linear elution with 10 column volumes of elution buffer, full wavelength scanning of the target protein and calculation of specific enzyme activity.
  • DyP enzyme activity at 25°C and pH 4.5, the amount of enzyme required to oxidize 1 ⁇ mol of Reactive Blue 19 per minute is 1 U.
  • CoCl 2 has a certain inhibitory effect on the recombinant DyP enzyme activity. Adding His can basically keep the recombinant DyP enzyme activity and bacterial growth unchanged. Exogenous addition of FeCl 2 , MnCl 2 and Glu can all Improve recombinant DyP enzyme activity and bacterial growth.
  • NCBI https://www.ncbi.nlm.nih.gov/nuccore/AM946981.2:1251856..1253112
  • the Dyp gene was cloned into the pET-28a vector to construct the recombinant plasmid pDyP.
  • the hema and Dyp genes were co-expressed on the pET-28a vector to construct the recombinant plasmid phemA-DyP.
  • the plasmid pDyP and phemA-DyP were introduced into E. coli BL21 (DE3) to form recombinant bacteria pD and pAD respectively.
  • the recombinant bacteria were activated and cultured overnight at 37°C and 200 r/min, they were transferred to the LB liquid medium containing 50 ⁇ g/mL Kan antibiotic according to the 4% inoculum.
  • the OD 600 value of the bacteria is 0.6-0.8, add IPTG at a final concentration of 0.3 mmol/L and induce 8 hours at 37°C.
  • IPTG induction intracellular hemoglobin was detected.
  • the heme concentration of pD strain was 3.4 ⁇ mol/L, while the heme concentration of co-expression strain pAD increased significantly to 9.8 ⁇ mol/L ( Figure 4).
  • the cells were suspended in phosphate buffer (20mmol/L, pH 7.4), the cells were disrupted by ultrasound for 20 minutes, and centrifuged at 4°C for 30 minutes at 10,000 r/min.
  • the crude enzyme solution is filtered with a 0.45 ⁇ m filter membrane to remove impurities.
  • the purified protein was analyzed by 10% SDS-PAGE.
  • Fluorescence method is used to detect the heme concentration.
  • the heme is heated in an oxalic acid reagent to remove ferrous ions and reduced to porphyrin with fluorescent characteristics.
  • the fluorescence value is detected by a microplate reader to calculate the hemoglobin concentration.
  • DyP has an obvious characteristic absorption peak of heme at 408nm, so the binding degree of DyP and heme can be analyzed by spectrum. Take 200 ⁇ L of pure enzyme sample, use the multifunctional microplate reader biotek to scan the wavelength at 280-700nm.
  • the heme and protein content of DyP is expressed at 408nm (Soret peak) and 280nm wavelength.
  • Soret peak is the characteristic absorption peak of heme, which can be used to characterize the level of heme incorporated into Dyp. Except for the strains containing empty plasmids, all other strains showed a Soret peak at 408nm. The peak analysis showed that, compared with pD strain 0.637, the co-expression strain pAD was 0.794. It can be seen that co-expression of Dyp gene and heMA gene enhances the binding degree of Dyp and cofactor heme (see Figure 5).
  • the reaction system includes 20mmol/L acetate buffer, 0.2mmol/L ABTS, 100 ⁇ L pure enzyme solution after proper dilution, H 2 O 2 with final concentration 0.2mmol/L to start the reaction, reaction time is 30S, terminator It is 200 ⁇ L, 2% SDS.
  • An enzyme activity unit is defined as the amount of enzyme required to oxidize 1 ⁇ mol ABTS under the conditions of 25°C and pH 4.5.
  • Dyp's enzyme activity detection method two the Dyp enzyme activity was measured with ABTS as a substrate.
  • the Dyp enzyme activity of the overexpression strain pD alone was 4.5 U/mg, while the pAD enzyme activity of the co-expression strain reached 9.2 U/mg, which was 1.1 times higher than the original (see Figure 6).
  • the reaction system includes 20mmol/L acetate buffer, 0.1mmol/L final concentration of Reactive Blue 19, and appropriate dilution of 100 ⁇ L pure enzyme solution (about 200 ⁇ g of protein), final concentration 0.2mmol/L L H 2 O 2 initiates the reaction, and the terminator is 200 ⁇ L, 2% SDS.
  • the light absorption value of the solution at 595nm was detected after 15 minutes of reaction, and it was recorded as A.
  • Decolorization rate (%) of Reactive Blue 19 (A 0 -A) ⁇ 100%/A 0 . Where A 0 is the light absorption value of the control group.

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Abstract

Provided is a method for increasing the enzyme activity of a highly recombinant dye decolorizing peroxidase, related to the technical field of bioengineering. Comprised are methods (1) and/or (2). For (1), a dye decolorizing peroxidase (DyP) is heterologously expressed in Escherichia coli, a recombinant strain is acquired and fermented, by adding an exogenous substance glutamate and/or FeCl2 to a fermentation culture medium, when 80 μmol/L of FeCl2 is added to the culture medium, the enzyme activity is increased to 1.45 times of that of a control. For (2), by means of the co-expression of hemA genes and DyP genes of a heme synthesis pathway key enzyme, combined with exogenously added 40 μmol/L glutamate, the enzyme activity of the DyP is increased to 13.2 U/mg, and dye decolorization rate is increased to 53.3%.

Description

一种提高重组染料脱色过氧化物酶酶活的方法Method for improving decolorization peroxidase enzyme activity of recombinant dye 技术领域Technical field
本发明涉及一种提高重组染料脱色过氧化物酶酶活的方法,属于生物工程技术领域。The invention relates to a method for improving the enzymatic activity of recombined dye decolorization peroxidase, and belongs to the technical field of bioengineering.
背景技术Background technique
染料脱色过氧化物酶(DyP)是过氧化物酶家族的新成员,以血红素为辅基,利用过氧化氢作为电子受体催化各种有机物,可以蒽醌染料及木质素模型化合物等为底物,具有潜在的应用价值,可以实现生物法对染料污水的降解,从而避免化学、物理等方法降解的二次污染问题。Dye decoloring peroxidase (DyP) is a new member of the peroxidase family. It uses heme as a prosthetic group and uses hydrogen peroxide as an electron acceptor to catalyze various organics. It can be used as anthraquinone dyes and lignin model compounds. The substrate has potential application value, which can realize the degradation of dye wastewater by biological method, thereby avoiding the secondary pollution problem of degradation by chemical and physical methods.
目前DyP主要来源于微生物,但是从原始菌中获取DyP,不仅含量低,而且不易与胞内其他蛋白相分离,所以常通过构建基因工程菌的方法生产DyP,如在大肠杆菌中异源表达DyP,但重组蛋白的含量偏低,一般在10mg/L以下。最近有研究发现,DyP与修饰蛋白融合表达,重组蛋白量可增至约200mg/L,然而高度过表达的融合DyP几乎没有活性。通过紫外-可见吸收光谱法和高分辨率质谱法对酶的分析表明,大部分高度过表达的酶只包含有铁缺乏的血红素前体原卟啉IX(PPIX)而不是血红素。在大肠杆菌中血红素合成始于谷氨酸(Glu),经由关键前体5-氨基乙酰丙酸(5-ALA),和多步生化反应生成原卟啉IX(PPIX),PPIX螯合铁后形成血红素。改造血红素合成基因提高血红素含量是提高DyP产量的一种方式,但因途径中涉及多个基因且存在反馈控制,提升幅度有限。At present, DyP is mainly derived from microorganisms, but DyP obtained from primitive bacteria is not only low in content, but also difficult to separate from other intracellular proteins. Therefore, DyP is often produced by the method of constructing genetic engineering bacteria, such as heterologous expression of DyP in E. coli , But the content of recombinant protein is low, generally below 10mg/L. Recent studies have found that DyP and modified protein fusion expression, the amount of recombinant protein can be increased to about 200mg/L, but the highly overexpressed fusion DyP has almost no activity. The analysis of enzymes by ultraviolet-visible absorption spectroscopy and high-resolution mass spectrometry showed that most of the highly overexpressed enzymes only contain the iron-deficient heme precursor protoporphyrin IX (PPIX) instead of heme. In Escherichia coli, heme synthesis starts from glutamic acid (Glu), through the key precursor 5-aminolevulinic acid (5-ALA), and multi-step biochemical reaction to produce protoporphyrin IX (PPIX), PPIX chelate iron After the formation of heme. Modifying heme synthesis genes to increase heme content is a way to increase DyP production. However, because multiple genes are involved in the pathway and there is feedback control, the improvement is limited.
在培养基中添加5-ALA是提高DyP产量的另一种方式,但成本较高,不适于大规模推广应用。Adding 5-ALA to the culture medium is another way to increase the yield of DyP, but the cost is high and it is not suitable for large-scale promotion and application.
因此,提供一种经济、简单、有效的提高DyP产量的方法,对于DyP的进一步应用有重要意义。Therefore, providing an economical, simple and effective method for increasing the yield of DyP is of great significance for the further application of DyP.
发明内容Summary of the invention
本发明的一个目的是提供一种提高重组DyP酶活的方法,所述方法为下述(1)和/或(2):An object of the present invention is to provide a method for improving the enzyme activity of recombinant DyP, the method being the following (1) and/or (2):
(1)在大肠杆菌中异源表达DyP,获得重组菌株,应用所述重组菌株进行发酵,在发酵培养基中添加Glu和/或Fe 2+(1) Expressing DyP heterologously in Escherichia coli to obtain a recombinant strain, using the recombinant strain for fermentation, and adding Glu and/or Fe 2+ to the fermentation medium;
(2)在大肠杆菌中共表达编码DyP的基因和血红素合成途径关键酶基因hemA,所述血红素合成途径关键酶的氨基酸序列是如GenBank编号为CAQ31712.1所示的序列。(2) Co-express the gene encoding DyP and the key enzyme gene hema of the heme synthesis pathway in E. coli. The amino acid sequence of the key enzyme of the heme synthesis pathway is the sequence shown in GenBank numbering CAQ31712.1.
在本发明的一种实施方式中,添加的Glu和/或Fe 2+的终浓度为20-100μmol/L。 In one embodiment of the present invention, the final concentration of Glu and/or Fe 2+ added is 20-100 μmol/L.
在本发明的一种实施方式中,添加的Glu和/或Fe 2+的终浓度为40-100μmol/L。 In one embodiment of the present invention, the final concentration of added Glu and/or Fe 2+ is 40-100 μmol/L.
在本发明的一种实施方式中,添加的Glu和/或Fe 2+的终浓度为60-100μmol/L。 In one embodiment of the present invention, the final concentration of the added Glu and/or Fe 2+ is 60-100 μmol/L.
在本发明的一种实施方式中,所述DyP的氨基酸序列是如GenBank编号为AAZ57111.1,UniProtKB/Swiss-Prot的编号为Q47KB1所示的序列。In one embodiment of the present invention, the amino acid sequence of the DyP is the sequence shown in GenBank numbering AAZ57111.1 and UniProtKB/Swiss-Prot numbering Q47KB1.
在本发明的一种实施方式中,所述重组菌株以pET系列载体为载体。In one embodiment of the present invention, the recombinant strain uses a pET series vector as a vector.
在本发明的一种实施方式中,所述发酵的条件为:种子培养后,以1-5%(v/v)的接种量转接至LB培养基中,200-220r/min、35-38℃培养至菌体OD 600达到0.6-0.8,向培养基中添加终浓度为0.1-0.5mmol/L IPTG,28-30℃诱导培养12-20h。 In one embodiment of the present invention, the fermentation conditions are: after seed culture, transfer to LB medium with an inoculum of 1-5% (v/v), 200-220r/min, 35- Cultivate at 38°C until the OD 600 of the bacteria reaches 0.6-0.8, add IPTG to the medium at a final concentration of 0.1-0.5mmol/L, and induce culture at 28-30°C for 12-20 hours.
在本发明的一种实施方式中,种子培养是将重组菌株接种到LB培养基中,200-220r/min、35-38℃培养10-15h。In one embodiment of the present invention, the seed culture is to inoculate the recombinant strain into the LB medium, and cultivate for 10-15 hours at 200-220 r/min at 35-38°C.
在本发明的一种实施方式中,LB培养基的配方为:胰蛋白胨10g/L,酵母提取物5g/L,氯化钠10g/L。In one embodiment of the present invention, the formula of LB medium is: tryptone 10g/L, yeast extract 5g/L, and sodium chloride 10g/L.
在本发明的一种实施方式中,所述大肠杆菌为大肠杆菌BL21(DE3)。In one embodiment of the present invention, the E. coli is E. coli BL21 (DE3).
在本发明的一种实施方式中,所述共表达以pET-28a为表达载体。In one embodiment of the present invention, the co-expression uses pET-28a as an expression vector.
本发明的第二个目的是提供一种基因工程菌,是在大肠杆菌中共表达编码DyP的基因和血红素合成途径关键酶基因hemA,所述DyP的氨基酸序列是如GenBank编号为AAZ57111.1所示的序列,所述血红素合成途径关键酶的氨基酸序列是如GenBank编号为CAQ31712.1所示的序列。The second purpose of the present invention is to provide a genetically engineered bacteria that co-expresses the gene encoding DyP and the key enzyme gene heme in the heme synthesis pathway in Escherichia coli. The amino acid sequence of the DyP is as shown in GenBank numbering AAZ57111.1 The sequence shown, the amino acid sequence of the key enzyme of the heme synthesis pathway is the sequence shown in GenBank numbering CAQ31712.1.
本发明的第三个目的是提供一种生产DyP的方法,是先在大肠杆菌中共表达编码DyP的基因和血红素合成途径关键酶基因hemA,再利用共表达的菌株进行发酵生产DyP,所述DyP的氨基酸序列是如GenBank编号为AAZ57111.1所示的序列,所述血红素合成途径关键酶的氨基酸序列是如GenBank编号为CAQ31712.1所示的序列。The third objective of the present invention is to provide a method for producing DyP, which is to first co-express the gene encoding DyP and the key enzyme gene heme synthesis pathway heme in E. coli, and then use the co-expressed strain to ferment to produce DyP. The amino acid sequence of DyP is the sequence shown in GenBank numbering AAZ57111.1, and the amino acid sequence of the key enzyme in the heme synthesis pathway is the sequence shown in GenBank numbering CAQ31712.1.
在本发明的一种实施方式中,所述发酵的条件是将共表达的菌株于35-38℃,200-220r/min活化培养8-14h后,按1-5%接种量(V/V)转接至LB培养基中,培养至菌体的OD 600值为0.6-0.8时,加入终浓度为0.1-1mmol/L IPTG,35-38℃条件诱导6-10h。 In one embodiment of the present invention, the fermentation conditions are to activate the co-expressed strain at 35-38°C, 200-220r/min for 8-14h, and then press 1-5% inoculum (V/V ) Transfer to LB medium, culture until the OD 600 value of the bacteria is 0.6-0.8, add IPTG at a final concentration of 0.1-1 mmol/L, and induce 6-10 hours at 35-38°C.
在本发明的一种实施方式中,所述发酵的培养基是LB培养基。In one embodiment of the present invention, the fermentation medium is LB medium.
本发明的第四个目的是提供一种对活性蓝19进行脱色的方法,是以活性蓝19为底物,添加上述基因工程菌表达后的蛋白。The fourth object of the present invention is to provide a method for decolorizing Reactive Blue 19, which uses Reactive Blue 19 as a substrate and adds the protein expressed by the genetically engineered bacteria.
在本发明的一种实施方式中,所述脱色的反应体系包括20mmol/L的醋酸缓冲液、终浓度0.1-0.3mmol/L的活性蓝19、180-220μg的上述基因工程菌表达后的蛋白,终浓度0.02-0.2 mmol/L的H 2O 2In one embodiment of the present invention, the decolorization reaction system includes 20 mmol/L acetate buffer, 0.1-0.3 mmol/L final concentration of reactive blue 19, and 180-220 μg of the protein expressed by the genetically engineered bacteria. , H 2 O 2 with a final concentration of 0.02-0.2 mmol/L.
本发明的另一个目的是提供上述方法在生物、纺织或化工领域内的应用。Another object of the present invention is to provide the application of the above method in the biological, textile or chemical fields.
本发明的有益效果:The beneficial effects of the present invention:
本发明提供了一种提高重组DyP酶活的方法。The invention provides a method for improving the enzyme activity of recombinant DyP.
(1)先将DyP在大肠杆菌中进行异源表达,获得重组菌株,进行发酵,通过在发酵培养基中添加外源物质Glu和/或Fe 2+,提高了重组DyP中血红素饱和度,当向培养基中添加100μmol/L的Glu+FeCl 2时,可将比酶活提高为对照的1.37倍;当向培养基中添加80μmol/L的FeCl 2时,可将酶活提高为对照的1.45倍。该方法简单易操作,添加的外源物质如Glu,FeCl 2价格便宜,经济实用。 (1) Firstly express DyP heterologously in Escherichia coli to obtain recombinant strains and carry out fermentation. By adding exogenous substances Glu and/or Fe 2+ to the fermentation medium, the heme saturation in recombinant DyP is increased. When adding 100μmol/L of Glu+FeCl 2 to the medium, the specific enzyme activity can be increased to 1.37 times that of the control; when adding 80μmol/L of FeCl 2 to the medium, the enzyme activity can be increased to that of the control 1.45 times. The method is simple and easy to operate, and the added foreign substances such as Glu and FeCl 2 are cheap and economical.
(2)通过E.coli内源血红素合成途径关键酶基因hemA和DyP基因的共表达,结合廉价外源血红素合成前体的添加,结果发现:(2) Through the co-expression of hema and DyP genes, the key enzyme genes in the E.coli endogenous heme synthesis pathway, combined with the addition of cheap exogenous heme synthesis precursors, it was found that:
(a)胞内血红素含量大幅提升:将重组菌在37℃、0.3mmol/L IPTG诱导后,进行胞内血红素检测,菌株pD中血红素浓度为3.4μmol/L,而共表达菌株pAD中血红素浓度明显提高,达到9.8μmol/L;在菌株pAD的培养基中外源添加20μmol/L FeCl 2、40μmol/L Glu,血红素浓度进一步提高到11.3μmol/L、13.5μmol/L; (a) The intracellular hemoglobin content is greatly increased: after the recombinant bacteria are induced at 37℃ and 0.3mmol/L IPTG, the intracellular hemoglobin test is performed. The heme concentration in the strain pD is 3.4μmol/L, and the co-expressing strain pAD The concentration of heme in the medium increased significantly, reaching 9.8 μmol/L; adding 20 μmol/L FeCl 2 and 40 μmol/L Glu to the culture medium of the strain pAD further increased the concentration of heme to 11.3 μmol/L and 13.5 μmol/L;
(b)DyP结合了更多的血红素:DyP的血红素和蛋白质含量通过408nm处(Soret峰值)和280nm波长表示。Soret峰值为血红素的特征吸收峰,可用来表征血红素掺入DyP中的水平。除包含空载质粒的菌株外,其他菌株均在408nm处出现Soret峰值;分析峰值表明,与pD菌株0.637相比,共表达菌株pAD为0.794,可知将DyP基因与血红素合成途径关键酶基因hemA共表达,增强了Dyp与辅因子血红素的结合度,外源分别添加20μmol/L FeCl 2、40μmol/L Glu,408nm处的峰值进一步提高至0.865、0.889; (b) DyP binds more heme: the heme and protein content of DyP is expressed by 408nm (Soret peak) and 280nm wavelength. Soret peak is the characteristic absorption peak of heme, which can be used to characterize the level of heme incorporated into DyP. Except for the strains containing empty plasmids, all other strains showed a Soret peak at 408nm; the analysis peak showed that compared with pD strain 0.637, the co-expression strain pAD was 0.794. It can be seen that the DyP gene and the heme synthesis pathway key enzyme gene heMA Co-expression enhances the binding degree of Dyp and cofactor heme. Exogenous addition of 20μmol/L FeCl 2 and 40μmol/L Glu respectively increases the peak at 408nm to 0.865 and 0.889;
(c)以2,2-联氮-二(3-乙基-苯并噻唑-6-磺酸)二铵盐(ABTS)为底物测定Dyp酶活性:菌株pD的Dyp酶活为4.5U/mg,而共表达菌株pAD酶活性达到9.2U/mg,比原来提高1.1倍,外源分别添加20μmol/L FeCl 2、40μmol/L Glu,酶活提高到11.8U/mg、13.2U/mg。 (c) The Dyp enzyme activity was measured with 2,2-diazo-bis(3-ethyl-benzothiazole-6-sulfonic acid) diammonium salt (ABTS) as a substrate: the Dyp enzyme activity of strain pD was 4.5 U /mg, while the pAD enzyme activity of the co-expression strain reached 9.2U/mg, which was 1.1 times higher than the original. Adding 20μmol/L FeCl 2 and 40μmol/L Glu separately, the enzyme activity increased to 11.8U/mg, 13.2U/mg .
(d)Dyp对活性蓝19的脱色作用:选用难降解的蒽醌类染料活性蓝19作为底物,进行Dyp的脱色测定;结果显示,重组菌株都表现出对染料活性蓝19的脱色活性,菌株pD表达的Dyp脱色率为24.4%,共表达菌株pAD的Dyp为37.4%,外源分别添加20μmol/L FeCl 2、40μmol/LGlu,染料脱色效率增强至42.7%、53.3%。 (d) The decolorization effect of Dyp on Reactive Blue 19: The non-degradable anthraquinone dye Reactive Blue 19 was used as the substrate to carry out the decolorization determination of Dyp; the results showed that the recombinant strains all showed decolorization activity on the dye Reactive Blue 19. The decolorization rate of Dyp expressed by the strain pD was 24.4%, and the Dyp of the co-expression strain pAD was 37.4%. When 20μmol/L FeCl 2 and 40μmol/LGlu were added, the dye decolorization efficiency was enhanced to 42.7% and 53.3%.
附图说明Description of the drawings
图1:金属离子和氨基酸对菌体量和重组DyP酶活性的影响。Figure 1: The effects of metal ions and amino acids on cell mass and recombinant DyP enzyme activity.
图2:添加剂对酶活与血红素饱和度的影响。Figure 2: The effect of additives on enzyme activity and heme saturation.
图3:FeCl 2浓度对重组DyP酶活性的影响。 Figure 3: The effect of FeCl 2 concentration on the enzyme activity of recombinant DyP.
图4:各菌株及添加剂对重组DyP血红素含量的影响。Figure 4: The effect of various strains and additives on the content of recombinant DyP heme.
图5:各菌株及添加剂对重组DyP光谱吸收的影响。Figure 5: The effects of various strains and additives on the spectral absorption of recombinant DyP.
图6:各菌株及添加剂对重组DyP酶活水平的影响。Figure 6: The effects of strains and additives on the level of recombinant DyP enzyme activity.
图7:各菌株及添加剂对重组DyP染料脱色效率的影响。Figure 7: Effects of strains and additives on the decolorization efficiency of recombinant DyP dyes.
具体实施方式detailed description
本发明中涉及的英文缩写与全称对应关系如下:The corresponding relationship between English abbreviations and full names involved in the present invention is as follows:
DyP:染料脱色过氧化物酶;DyP: dye decolorizing peroxidase;
Glu:谷氨酸;Glu: glutamic acid;
Fe 2+:亚铁离子; Fe 2+ :ferrous ion;
FeCl 2:氯化亚铁; FeCl 2 : Ferrous chloride;
H 2O 2:过氧化氢; H 2 O 2 : hydrogen peroxide;
菌株pD:共表达染料脱色过氧化物酶基因的菌株;Strain pD: a strain co-expressing the dye decolorizing peroxidase gene;
菌株pAD:共表达染料脱色过氧化物酶基因与血红素合成途径关键酶基因hemA的菌株;Strain pAD: a strain that co-expresses the dye decoloring peroxidase gene and the key enzyme gene heme in the heme synthesis pathway;
菌株pAD(FeCl 2):将染料脱色过氧化物酶基因与血红素合成途径关键酶基因hemA共表达,外源添加FeCl 2Strain pAD (FeCl 2 ): Co-express the dye decoloring peroxidase gene and the key enzyme gene heme in the heme synthesis pathway, and add FeCl 2 exogenously;
菌株pAD(Glu):将染料脱色过氧化物酶基因与血红素合成途径关键酶基因hemA共表达,外源添加Glu;Strain pAD (Glu): Co-express the dye decoloring peroxidase gene with hema, a key enzyme gene in the heme synthesis pathway, and add Glu exogenously;
OD 600:波长为600nm时的吸光度值; OD 600 : absorbance value at a wavelength of 600nm;
CoCl 2:氯化钴; CoCl 2 : Cobalt chloride;
MnCl 2:氯化锰; MnCl 2 : Manganese chloride;
His:组氨酸;His: histidine;
ABTS:2,2-联氮-二(3-乙基-苯并噻唑-6-磺酸)二铵盐;ABTS: 2,2-Diazo-bis(3-ethyl-benzothiazole-6-sulfonic acid) diammonium salt;
5-ALA:5-氨基乙酰丙酸。5-ALA: 5-aminolevulinic acid.
实施例1Example 1
利用GenBank数据库获得DyP全长蛋白序列(GenBank编号为AAZ57111.1),合成编码该蛋白的目的基因。以质粒pET-28a(+)为载体,通过酶切连接,合成含有目的基因的重组质粒。将含有目的基因的重组质粒转化到E.coli BL21进行异源表达,获得一株重组菌。The full-length DyP protein sequence (GenBank numbering AAZ57111.1) was obtained using GenBank database, and the target gene encoding the protein was synthesized. Using plasmid pET-28a(+) as a vector, through restriction digestion and ligation, a recombinant plasmid containing the target gene was synthesized. The recombinant plasmid containing the target gene was transformed into E. coli BL21 for heterologous expression, and a recombinant strain was obtained.
将重组菌株接种到含有卡那霉素的LB培养基中,200r/min、37℃培养12h,以4%(v/v) 接种量转接至含有100mL新鲜的LB培养基的500mL摇瓶中,相同条件培养至菌体OD 600达到0.6-0.8时。向培养基中添加终浓度为0.3mmol/L异丙基-β-D-硫代半乳糖吡喃苷(Isopropylβ-D-thiogalactopyranoside,IPTG),30℃诱导培养14h,8000rpm离心20min得到菌体,用50mmol/L的pH 7.4磷酸钾缓冲溶液重新悬浮细胞,超声破碎30min,10000rpm离心30min收集上清液,过0.22μm水系滤膜得到粗酶液,通过1mL His Trap TM HP亲和镍柱分离纯化,收集目的蛋白,进行SDS-PAGE电泳以鉴定重组DyP纯度。 The recombinant strain was inoculated into LB medium containing kanamycin, cultured at 200r/min, 37°C for 12h, and transferred to a 500mL shake flask containing 100mL of fresh LB medium at 4% (v/v) inoculum , And cultivate under the same conditions until the OD 600 of the bacteria reaches 0.6-0.8. Add isopropyl-β-D-thiogalactopyranoside (IPTG) at a final concentration of 0.3mmol/L to the culture medium, induce culture at 30°C for 14h, and centrifuge at 8000rpm for 20min to obtain the bacteria. Cells were resuspended in 50mmol/L pH 7.4 potassium phosphate buffer solution, sonicated for 30min, centrifuged at 10000rpm for 30min to collect the supernatant, passed through a 0.22μm water filter membrane to obtain the crude enzyme solution, separated and purified by 1mL His Trap TM HP affinity nickel column , Collect the target protein and perform SDS-PAGE electrophoresis to identify the purity of the recombinant DyP.
分别将100μmol/L的Glu、FeCl 2、CoCl 2、MnCl 2、Glu+FeCl 2加入培养基中,添加的IPTG终浓度为0.3mmol/L,在30℃下诱导培养14h,收集菌体离心、悬浮、破碎、离心,收集上清液过0.22μm水系滤膜得到粗酶液,通过1mL His Trap TM HP亲和镍柱分离纯化,用10个柱体积的洗脱缓冲液进行线性洗脱,对目的蛋白进行全波长扫描和血红素饱和度的计算。 100μmol/L Glu, FeCl 2 , CoCl 2 , MnCl 2 , Glu+FeCl 2 were added to the culture medium, the final concentration of IPTG added was 0.3 mmol/L, and the culture was induced at 30°C for 14 hours. The cells were collected and centrifuged. Suspend, break, centrifuge, collect the supernatant and pass through a 0.22μm aqueous membrane to obtain the crude enzyme solution, which is separated and purified by a 1mL His Trap TM HP affinity nickel column, and linearly eluted with 10 column volumes of elution buffer. The target protein performs full-wavelength scanning and hemoglobin saturation calculation.
血红素饱和度定义为在408nm处的吸光值与280nm处之比,即A 408/A 280Heme saturation is defined as the ratio of absorbance at 408nm to 280nm, that is, A 408 /A 280 .
结果表明,CoCl 2的加入降低了血红素饱和度,添加MnCl 2没有显著影响(表1),而添加Glu+FeCl 2,显著提高了重组DyP中血红素的饱和度。 The results showed that the addition of CoCl 2 reduced the heme saturation, the addition of MnCl 2 had no significant effect (Table 1), while the addition of Glu+FeCl 2 significantly increased the heme saturation in the recombinant DyP.
表1不同外源添加剂对重组DyP中血红素饱和度的影响Table 1 The effect of different exogenous additives on heme saturation in recombinant DyP
Figure PCTCN2019120475-appb-000001
Figure PCTCN2019120475-appb-000001
注:B为不加任何添加剂的对照组。Note: B is the control group without any additives.
向培养基中分别添加终浓度为100μmol/L的His、Glu以及FeCl 2、CoCl 2、MnCl 2、Glu+FeCl 2,考察氨基酸和金属离子对重组DyP酶活和菌体生长的影响,其中不添加任何添加剂为对照组(B)。添加的IPTG终浓度为0.3mmol/L,在30℃下诱导培养14h,收集菌体离心、悬浮、破碎、离心,收集上清液过0.22μm水系滤膜得到粗酶液,通过1mL His Trap TM HP亲和镍柱分离纯化,用10个柱体积的洗脱缓冲液进行线性洗脱,对目的蛋白进行全波长扫描和比酶活的计算。 Add His, Glu, FeCl 2 , CoCl 2 , MnCl 2 , Glu+FeCl 2 to the medium with a final concentration of 100 μmol/L, and investigate the effects of amino acids and metal ions on the enzyme activity and bacterial growth of recombinant DyP. Add any additives as the control group (B). Add IPTG to a final concentration of 0.3mmol/L, induce culture at 30℃ for 14h, collect the bacteria by centrifugation, suspension, breakage, centrifugation, collect the supernatant and pass through 0.22μm water filter membrane to obtain the crude enzyme solution, pass 1mL His Trap TM HP affinity nickel column separation and purification, linear elution with 10 column volumes of elution buffer, full wavelength scanning of the target protein and calculation of specific enzyme activity.
DyP酶活测定方法一:DyP enzyme activity determination method one:
向反应体系中依次加入100mmol/L醋酸钠缓冲溶液(pH 4.5),100μmol/L活性蓝19和适量的酶液,最后加入终浓度为0.1mMH 2O 2启动反应,酶促反应10min,然后通过加入200 μL 2%SDS终止反应。在室温下,于波长595nm处检测吸光值变化。蛋白质浓度测定采用BCA法,以牛血清蛋白为标准蛋白。 Add 100mmol/L sodium acetate buffer solution (pH 4.5), 100μmol/L Reactive Blue 19 and an appropriate amount of enzyme solution to the reaction system, and finally add a final concentration of 0.1mMH 2 O 2 to start the reaction, enzymatic reaction for 10 minutes, and then pass Add 200 μL 2% SDS to stop the reaction. At room temperature, the change in absorbance was detected at a wavelength of 595nm. The protein concentration was determined using the BCA method, with bovine serum albumin as the standard protein.
DyP酶活定义:在25℃,pH 4.5条件下,每分钟氧化1μmol活性蓝19所需的酶量为1U。Definition of DyP enzyme activity: at 25°C and pH 4.5, the amount of enzyme required to oxidize 1 μmol of Reactive Blue 19 per minute is 1 U.
比酶活(U/mg)=酶活(U/mL)×[蛋白浓度(mg/mL)] -1Specific enzyme activity (U/mg) = enzyme activity (U/mL) × [protein concentration (mg/mL)] -1 .
使用DyP比酶活测定方法一测定DyP酶活。结果如下:Use DyP specific enzyme activity determination method-determine DyP enzyme activity. The results are as follows:
(1)如图1所示,CoCl 2对重组DyP酶活有一定抑制作用,添加His对重组DyP酶活和菌体的生长基本保持不变,外源添加FeCl 2、MnCl 2以及Glu都能提高重组DyP酶活和菌体生长量。当向培养基中添加100μmol/L的FeCl 2时,重组DyP酶活从22.34U/L提高至26.20U/L,菌体生长量从5.45g/L提高至6.17g/L;当向培养基中添加100μmol/L的Glu时,重组DyP酶活从22.34U/L提高至23.33U/L,菌体生长量从5.45g/L提高至5.78g/L; (1) As shown in Figure 1, CoCl 2 has a certain inhibitory effect on the recombinant DyP enzyme activity. Adding His can basically keep the recombinant DyP enzyme activity and bacterial growth unchanged. Exogenous addition of FeCl 2 , MnCl 2 and Glu can all Improve recombinant DyP enzyme activity and bacterial growth. When 100μmol/L FeCl 2 was added to the culture medium, the enzyme activity of recombinant DyP increased from 22.34U/L to 26.20U/L, and the bacterial growth increased from 5.45g/L to 6.17g/L; When 100μmol/L of Glu was added to the mixture, the enzyme activity of recombinant DyP increased from 22.34U/L to 23.33U/L, and the cell growth increased from 5.45g/L to 5.78g/L;
(2)如图2所示,当向培养基中添加100μmol/L的Glu+FeCl 2时,比酶活提高为对照(101U/g)的1.37倍; (2) As shown in Figure 2, when 100μmol/L of Glu+FeCl 2 is added to the medium, the specific enzyme activity increases to 1.37 times that of the control (101U/g);
(3)向培养基中分别添加终浓度为40、60、80、100、120μmol/L的FeCl 2,如图3所示,随着FeCl 2浓度增加,酶活先增后降,当浓度为80μmol/L时,酶活达到31.31U/L,是对照的1.45倍。 (3) Add FeCl 2 with final concentrations of 40, 60, 80, 100, 120 μmol/L to the culture medium, as shown in Figure 3. As the concentration of FeCl 2 increases, the enzyme activity first increases and then decreases. When the concentration is At 80μmol/L, the enzyme activity reached 31.31U/L, which was 1.45 times that of the control.
实施例2Example 2
(1)重组质粒的构建(1) Construction of recombinant plasmid
编码来源于大肠杆菌的谷氨酰胺tRNA还原酶的hemA基因的核苷酸序列参考NCBI(https://www.ncbi.nlm.nih.gov/nuccore/AM946981.2:1251856..1253112)。Refer to NCBI (https://www.ncbi.nlm.nih.gov/nuccore/AM946981.2:1251856..1253112) for the nucleotide sequence of the heMA gene encoding glutamine tRNA reductase from Escherichia coli.
编码来源于Thermobifida fusca的DyP的基因的核苷酸序列参考NCBI(https://www.ncbi.nlm.nih.gov/nuccore/CP000088.1:3600559..3601851)。将Dyp基因克隆在pET-28a载体上,构建重组质粒pDyP。将hemA和Dyp基因共表达在pET-28a载体上,构建重组质粒phemA-DyP。将质粒pDyP、phemA-DyP导入大肠杆菌BL21(DE3)中,分别构成重组菌pD、pAD。Refer to NCBI (https://www.ncbi.nlm.nih.gov/nuccore/CP000088.1:3600559..3601851) for the nucleotide sequence of the gene encoding DyP from Thermobifida fusca. The Dyp gene was cloned into the pET-28a vector to construct the recombinant plasmid pDyP. The hema and Dyp genes were co-expressed on the pET-28a vector to construct the recombinant plasmid phemA-DyP. The plasmid pDyP and phemA-DyP were introduced into E. coli BL21 (DE3) to form recombinant bacteria pD and pAD respectively.
(2)重组蛋白的表达与纯化鉴定(2) Expression and purification identification of recombinant protein
重组菌于37℃,200r/min过夜活化培养后,按4%接种量转接至含50μg/mL Kan抗生素的LB液体培养基中。待菌体的OD 600值为0.6-0.8时,加入终浓度0.3mmol/L IPTG,37℃条件诱导8h。IPTG诱导后,进行胞内血红素检测,pD菌株血红素浓度为3.4μmol/L,而共表达菌株pAD血红素浓度明显提高,达到9.8μmol/L(图4)。 After the recombinant bacteria were activated and cultured overnight at 37°C and 200 r/min, they were transferred to the LB liquid medium containing 50 μg/mL Kan antibiotic according to the 4% inoculum. When the OD 600 value of the bacteria is 0.6-0.8, add IPTG at a final concentration of 0.3 mmol/L and induce 8 hours at 37°C. After IPTG induction, intracellular hemoglobin was detected. The heme concentration of pD strain was 3.4 μmol/L, while the heme concentration of co-expression strain pAD increased significantly to 9.8 μmol/L (Figure 4).
用磷酸缓冲液(20mmol/L,pH 7.4)悬浮菌体,超声破碎细胞20min,4℃,10000r/min离心30min。粗酶液用0.45μm过滤膜进行过滤,以除去杂质。用含有20mmol/L咪唑的磷酸缓冲液进行平衡后上样,最后用含有500mmol/L咪唑的磷酸缓冲液进行线性洗脱。根据洗脱图谱,收集对应洗脱峰的酶液。纯化后的蛋白用10%的SDS-PAGE进行分析。The cells were suspended in phosphate buffer (20mmol/L, pH 7.4), the cells were disrupted by ultrasound for 20 minutes, and centrifuged at 4°C for 30 minutes at 10,000 r/min. The crude enzyme solution is filtered with a 0.45μm filter membrane to remove impurities. After equilibration with phosphate buffer containing 20mmol/L imidazole, load the sample, and finally linear elution with phosphate buffer containing 500mmol/L imidazole. According to the elution profile, collect the enzyme solution corresponding to the elution peak. The purified protein was analyzed by 10% SDS-PAGE.
(3)重组菌培养基中添加血红素合成前体(3) Add heme synthesis precursor to the recombinant culture medium
在菌株pAD的培养基中外源添加20μmol/L FeCl 2、40μmol/L Glu。 Exogenously add 20μmol/L FeCl 2 and 40μmol/L Glu to the culture medium of strain pAD.
(4)血红素浓度测定(4) Determination of heme concentration
利用荧光法来检测血红素浓度,血红素在草酸试剂中受热脱去亚铁离子,还原成具有荧光特征的卟啉,通过酶标仪检测其荧光值,推算出血红素浓度。根据公式V=8/OD取诱导后的菌液,4℃、8000g、离心5min,弃上清。超纯水水洗后将菌体重悬转移至1.5mL琥珀色离心管。向每个离心管中加入500μL,20mM草酸溶液,于4℃暗室放置16h。而后,加入500μL、2mol/L草酸溶液,对照组与实验组分别在室温和95℃水浴处理30min。待样品自然冷却后,12000g、4℃、离心5min,取200μL上清于黑色96孔荧光板,进行荧光值检测(激发波长、发射波长为分别设定为400nm和620nm)。Fluorescence method is used to detect the heme concentration. The heme is heated in an oxalic acid reagent to remove ferrous ions and reduced to porphyrin with fluorescent characteristics. The fluorescence value is detected by a microplate reader to calculate the hemoglobin concentration. According to the formula V=8/OD, take the induced bacterial solution, centrifuge at 8000g at 4°C for 5min, and discard the supernatant. After washing with ultrapure water, resuspend the bacteria and transfer to a 1.5mL amber centrifuge tube. Add 500 μL of 20 mM oxalic acid solution to each centrifuge tube, and place in a dark room at 4°C for 16 hours. Then, 500μL, 2mol/L oxalic acid solution was added, and the control group and the experimental group were treated in a water bath at room temperature and 95°C for 30 minutes. After the sample is naturally cooled, centrifuge at 12000g at 4°C for 5min, and take 200μL of supernatant on a black 96-well fluorescent plate for fluorescence detection (excitation wavelength and emission wavelength are set to 400nm and 620nm, respectively).
(5)DyP的光谱分析(5) Spectral analysis of DyP
DyP在408nm处有一个明显的亚铁血红素酶的特征吸收峰,因此可以通过光谱分析DyP与血红素结合度。取200μL纯酶样品,运用多功能酶标仪biotek在280-700nm对其进行波长扫描。DyP has an obvious characteristic absorption peak of heme at 408nm, so the binding degree of DyP and heme can be analyzed by spectrum. Take 200μL of pure enzyme sample, use the multifunctional microplate reader biotek to scan the wavelength at 280-700nm.
DyP的血红素和蛋白质含量通过408nm处(Soret峰值)和280nm波长表示。Soret峰值为血红素的特征吸收峰,可用来表征血红素掺入Dyp中的水平。除包含空载质粒的菌株外,其他菌株均在408nm处出现Soret峰值。分析峰值表明,与pD菌株0.637相比,共表达菌株pAD为0.794,可知,将Dyp基因与hemA基因共表达,增强了Dyp与辅因子血红素的结合度(见图5)。The heme and protein content of DyP is expressed at 408nm (Soret peak) and 280nm wavelength. Soret peak is the characteristic absorption peak of heme, which can be used to characterize the level of heme incorporated into Dyp. Except for the strains containing empty plasmids, all other strains showed a Soret peak at 408nm. The peak analysis showed that, compared with pD strain 0.637, the co-expression strain pAD was 0.794. It can be seen that co-expression of Dyp gene and heMA gene enhances the binding degree of Dyp and cofactor heme (see Figure 5).
(6)Dyp的酶活性检测方法二(6) Dyp enzyme activity detection method two
以ABTS为底物,检测DyP的活性。反应体系包括20mmol/L的醋酸缓冲液、终浓度0.2mmol/L的ABTS、适量稀释后的100μL纯酶液,终浓度0.2mmol/L的H 2O 2启动反应,反应时间为30S,终止剂为200μL、2%SDS。使用紫外可见分光光度计检测反应产物在420nm(ε=36,000M -1cm -1)的光吸收值。 Use ABTS as a substrate to detect the activity of DyP. The reaction system includes 20mmol/L acetate buffer, 0.2mmol/L ABTS, 100μL pure enzyme solution after proper dilution, H 2 O 2 with final concentration 0.2mmol/L to start the reaction, reaction time is 30S, terminator It is 200 μL, 2% SDS. An ultraviolet-visible spectrophotometer was used to detect the light absorption value of the reaction product at 420 nm (ε=36,000M -1 cm -1 ).
一个酶活力单位定义为:在25℃、pH 4.5条件下,氧化1μmol ABTS所需要的酶量。An enzyme activity unit is defined as the amount of enzyme required to oxidize 1 μmol ABTS under the conditions of 25°C and pH 4.5.
比酶活(U·mg -1)=酶活(U·mL -1)×[蛋白浓度(mg·mL -1)] -1 Specific enzyme activity (U·mg -1 ) = enzyme activity (U·mL -1 )×[protein concentration (mg·mL -1 )] -1
使用Dyp的酶活性检测方法二,以ABTS为底物测定Dyp酶活性。单独过表达菌株pD的Dyp酶活为4.5U/mg,而共表达菌株pAD酶活性达到9.2U/mg,比原来提高1.1倍(见图6)。Using Dyp's enzyme activity detection method two, the Dyp enzyme activity was measured with ABTS as a substrate. The Dyp enzyme activity of the overexpression strain pD alone was 4.5 U/mg, while the pAD enzyme activity of the co-expression strain reached 9.2 U/mg, which was 1.1 times higher than the original (see Figure 6).
(7)DyP对活性蓝19的脱色作用(7) Decolorization of DyP on Reactive Blue 19
以活性蓝19为研究对象,反应体系包括20mmol/L的醋酸缓冲液、终浓度0.1mmol/L的活性蓝19、适量稀释后的100μL纯酶液(蛋白量约200μg),终浓度0.2mmol/L的H 2O 2启动反应,终止剂为200μL、2%SDS。在25℃、pH 4.5条件下,反应15分钟后检测溶液在595nm的光吸收值,记为A。活性蓝19的脱色率(%)=(A 0-A)×100%/A 0。其中A 0为对照组光吸收值。 Taking Reactive Blue 19 as the research object, the reaction system includes 20mmol/L acetate buffer, 0.1mmol/L final concentration of Reactive Blue 19, and appropriate dilution of 100μL pure enzyme solution (about 200μg of protein), final concentration 0.2mmol/L L H 2 O 2 initiates the reaction, and the terminator is 200 μL, 2% SDS. Under the conditions of 25°C and pH 4.5, the light absorption value of the solution at 595nm was detected after 15 minutes of reaction, and it was recorded as A. Decolorization rate (%) of Reactive Blue 19=(A 0 -A)×100%/A 0 . Where A 0 is the light absorption value of the control group.
结果显示,重组菌株都表现出对染料活性蓝19的脱色活性。单独表达菌株pD脱色率为24.4%,共表达菌株pAD为37.4%(见图7)。The results showed that the recombinant strains all showed decolorizing activity to the dye reactive blue 19. The pD decolorization rate of the single expression strain was 24.4%, and the co-expression strain pAD was 37.4% (see Figure 7).
实施例3Example 3
在菌株pAD培养基中外源添加20μmol/L FeCl 2,其他条件同实施例2。血红素浓度进一步提高到11.3μmol/L,408nm处的峰值提高至0.865,Dyp的酶活提高至11.8U/mg(测定方法见Dyp的酶活性检测方法二),染料脱色率提高到42.7%。 Exogenously added 20 μmol/L FeCl 2 to the strain pAD medium, and other conditions were the same as in Example 2. The heme concentration was further increased to 11.3μmol/L, the peak at 408nm was increased to 0.865, the enzyme activity of Dyp was increased to 11.8U/mg (see Dyp's enzyme activity detection method 2), and the dye decolorization rate was increased to 42.7%.
在菌株pAD培养基中外源添加40μmol/L Glu,其他条件同实施例2。血红素浓度提高到13.5μmol/L,408nm处的峰值提高至0.889,Dyp的酶活提高至13.2U/mg(测定方法见Dyp的酶活性检测方法二),染料脱色率提高到53.3%。Add 40 μmol/L Glu exogenously to the strain pAD medium, and other conditions are the same as in Example 2. The heme concentration increased to 13.5μmol/L, the peak at 408nm increased to 0.889, the enzyme activity of Dyp increased to 13.2U/mg (see Dyp's enzyme activity detection method 2 for the determination method), and the dye decolorization rate increased to 53.3%.
虽然本发明已以较佳实施例公开如上,但其并非用以限定本发明,任何熟悉此技术的人,在不脱离本发明的精神和范围内,都可做各种的改动与修饰,因此本发明的保护范围应该以权利要求书所界定的为准。Although the present invention has been disclosed as above in preferred embodiments, it is not intended to limit the present invention. Anyone familiar with this technology can make various changes and modifications without departing from the spirit and scope of the present invention. The protection scope of the present invention should be defined by the claims.

Claims (18)

  1. 一种提高重组染料脱色过氧化物酶酶活的方法,其特征在于,所述方法为下述(1)和/或(2):A method for improving the enzymatic activity of recombinant dye decoloring peroxidase, characterized in that the method is the following (1) and/or (2):
    (1)在大肠杆菌中异源表达染料脱色过氧化物酶,获得重组菌株,应用所述重组菌株进行发酵,在发酵培养基中添加Glu和/或Fe 2+(1) Expressing dye decoloring peroxidase heterologously in E. coli to obtain a recombinant strain, using the recombinant strain for fermentation, and adding Glu and/or Fe 2+ to the fermentation medium;
    (2)在大肠杆菌中共表达编码染料脱色过氧化物酶的基因和血红素合成途径关键酶基因hemA,所述血红素合成途径关键酶的氨基酸序列是如GenBank编号为CAQ31712.1所示的序列。(2) Co-express the gene encoding dye decoloring peroxidase and the key enzyme gene heme in the heme synthesis pathway in Escherichia coli. The amino acid sequence of the key enzyme in the heme synthesis pathway is the sequence shown in GenBank numbering CAQ31712.1 .
  2. 如权利要求1所述的方法,其特征在于,添加的Glu和/或Fe 2+的终浓度为20-100μmol/L。 The method of claim 1, wherein the final concentration of the added Glu and/or Fe 2+ is 20-100 μmol/L.
  3. 如权利要求1或2所述的方法,其特征在于,添加的Glu和/或Fe 2+的终浓度为40-100μmol/L。 The method according to claim 1 or 2, characterized in that the final concentration of added Glu and/or Fe 2+ is 40-100 μmol/L.
  4. 如权利要求1所述的方法,其特征在于,所述染料脱色过氧化物酶的氨基酸序列是如GenBank编号为AAZ57111.1所示的序列。The method of claim 1, wherein the amino acid sequence of the dye decoloring peroxidase is the sequence shown in GenBank numbering AAZ57111.1.
  5. 如权利要求1所述的方法,其特征在于,所述大肠杆菌为大肠杆菌BL21(DE3)。The method of claim 1, wherein the E. coli is E. coli BL21 (DE3).
  6. 如权利要求1或5所述的方法,其特征在于,所述重组菌株以pET系列载体为载体。The method of claim 1 or 5, wherein the recombinant strain uses a pET series vector as a vector.
  7. 如权利要求1所述的方法,其特征在于,发酵条件为:种子培养后,以1-5%(v/v)的接种量转接至LB培养基中,200-220r/min、35-38℃培养至菌体OD 600达到0.6-0.8,向培养基中添加终浓度为0.1-0.5mmol/L IPTG,28-30℃诱导培养12-20h。 The method according to claim 1, characterized in that the fermentation conditions are: after seed culture, transfer to LB medium with an inoculum of 1-5% (v/v), 200-220r/min, 35- Cultivate at 38°C until the OD 600 of the bacteria reaches 0.6-0.8, add IPTG to the medium at a final concentration of 0.1-0.5mmol/L, and induce culture at 28-30°C for 12-20 hours.
  8. 如权利要求7所述的方法,其特征在于,种子培养是将重组菌株接种到LB培养基中,200-220r/min、35-38℃培养10-15h。The method according to claim 7, wherein the seed culture is by inoculating the recombinant strain into LB medium, and culturing at 200-220r/min at 35-38°C for 10-15h.
  9. 如权利要求7所述的方法,其特征在于,LB培养基的配方如下:胰蛋白胨10g/L,酵母提取物5g/L,氯化钠10g/L。The method according to claim 7, wherein the formula of the LB medium is as follows: tryptone 10g/L, yeast extract 5g/L, sodium chloride 10g/L.
  10. 如权利要求1所述的方法,其特征在于,所述共表达以pET-28a为表达载体。The method of claim 1, wherein the co-expression uses pET-28a as an expression vector.
  11. 一种基因工程菌,是在大肠杆菌中共表达编码染料脱色过氧化物酶的基因和血红素合成途径关键酶基因hemA,所述染料脱色过氧化物酶的氨基酸序列是如GenBank编号为AA257111.1所示的序列,所述血红素合成途径关键酶的氨基酸序列是如GenBank编号为CAQ31712.1所示的序列。A genetically engineered bacteria that co-expresses the gene encoding dye decoloring peroxidase and the key enzyme gene heme synthesis pathway hema in E. coli. The amino acid sequence of the dye decoloring peroxidase is as GenBank numbered AA257111.1 The sequence shown, the amino acid sequence of the key enzyme of the heme synthesis pathway is the sequence shown in GenBank numbering CAQ31712.1.
  12. 一种生产染料脱色过氧化物酶的方法,是先在大肠杆菌中共表达编码染料脱色过氧化物酶的基因和血红素合成途径关键酶基因hemA,再利用共表达的菌株进行发酵生产染料脱色过氧化物酶;所述染料脱色过氧化物酶的氨基酸序列是如GenBank编号为AA257111.1所 示的序列,所述血红素合成途径关键酶的氨基酸序列是如GenBank编号为CAQ31712.1所示的序列。A method of producing dye decoloring peroxidase is to first co-express the gene encoding dye decoloring peroxidase and the key enzyme gene heme synthesis pathway in E. coli, and then use the co-expressed strains to ferment to produce dye decolorization. Oxidase; the amino acid sequence of the dye decoloring peroxidase is as shown in GenBank numbering AA257111.1, and the amino acid sequence of the key enzyme in the heme synthesis pathway is as shown in GenBank numbering CAQ31712.1 sequence.
  13. 如权利要求12所述的方法,其特征在于,所述发酵的条件是将共表达的菌株于35-38℃,200-220r/min活化培养8-14h后,按1-5%接种量(V/V)转接至LB培养基中,培养至菌体的OD 600值为0.6-0.8时,加入终浓度为0.1-1mmol/L IPTG,35-38℃条件诱导6-10h。 The method according to claim 12, characterized in that, the conditions of the fermentation are that the co-expressed strain is activated and cultured at 35-38°C, 200-220r/min for 8-14h, and then the inoculum amount is 1-5% ( V/V) was transferred to LB medium, cultured until the OD 600 value of the bacteria was 0.6-0.8, and IPTG was added at a final concentration of 0.1-1 mmol/L, and induced at 35-38°C for 6-10 hours.
  14. 如权利要求12或13的方法,其特征在于,所述发酵的培养基是LB培养基。The method according to claim 12 or 13, characterized in that the fermentation medium is LB medium.
  15. 一种对活性蓝19进行脱色的方法,其特征在于,以活性蓝19为底物,添加权利要求11所述基因工程菌表达后的蛋白。A method for decolorizing Reactive Blue 19, which is characterized in that the Reactive Blue 19 is used as a substrate and the protein expressed by the genetically engineered bacteria of claim 11 is added.
  16. 如权利要求15所述的方法,其特征在于,所述脱色的反应体系包括20mmol/L的醋酸缓冲液、终浓度0.1-0.3mmol/L的活性蓝19、180-220μg的权利要求11所述基因工程菌表达后的蛋白,终浓度0.02-0.2mmol/L的H 2O 2The method according to claim 15, wherein the decolorization reaction system comprises 20 mmol/L acetate buffer, a final concentration of 0.1-0.3 mmol/L reactive blue 19, and 180-220 μg of the claim 11 The protein expressed by genetically engineered bacteria has a final concentration of 0.02-0.2mmol/L H 2 O 2 .
  17. 权利要求1-10任一所述的方法在生物、纺织或化工领域内的应用。Application of the method of any one of claims 1-10 in the biological, textile or chemical fields.
  18. 权利要求12-16任一所述的方法在生物、纺织或化工领域内的应用。The application of the method according to any one of claims 12-16 in the biological, textile or chemical fields.
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DATABASE Genbank 27 February 2015 (2015-02-27), ANONYMOUS: "glutamyl-tRNA reductase [Escherichia coli BL21(DE3)", XP055739904, retrieved from NCBI Database accession no. CAQ31712.1 *
DATABASE Genbank 28 January 2014 (2014-01-28), ANONYMOUS: "dyp-type peroxidase [Thermobifida fusca YX], access no. AAZ57111.1.", XP055739906, retrieved from NCBI Database accession no. AAZ57111.1 *
LIQUN WANG,ALAN K.CHANG,WENJIE YUAN, FENGWU BAI: "Recombinant Expression, Purification and Characterization of a Novel Dyp-Type Peroxidase in Escherichia Coli", CHINESE JOURNAL OF BIOTECHNOLOGY, vol. 29, no. 6, 25 June 2013 (2013-06-25), pages 772 - 784, XP055739911, DOI: 10.13345/j.cjb.2013.06.005 *
RAMZI AHMAD BAZLI; HYEON JEONG EUN; HAN SUNG OK: "Improved catalytic activities of a dye-decolorizing peroxidase (DyP) by overexpression of ALA and heme biosynthesis genes in Escherichia coli.", PROCESS BIOCHEMISTRY, vol. 50, 18 May 2015 (2015-05-18), pages 1272 - 1276, XP029189758, ISSN: 1359-5113, DOI: 10.1016/j.procbio.2015.05.004 *

Cited By (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN111593061A (en) * 2020-07-06 2020-08-28 江南大学 Method for improving activity of dye decolorizing peroxidase
CN113683813A (en) * 2021-08-18 2021-11-23 江南大学 Application of dye decoloration peroxidase in degradation of polystyrene

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