WO2019085926A1 - Polymyxin analogue and preparation method therefor - Google Patents

Polymyxin analogue and preparation method therefor Download PDF

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Publication number
WO2019085926A1
WO2019085926A1 PCT/CN2018/112889 CN2018112889W WO2019085926A1 WO 2019085926 A1 WO2019085926 A1 WO 2019085926A1 CN 2018112889 W CN2018112889 W CN 2018112889W WO 2019085926 A1 WO2019085926 A1 WO 2019085926A1
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WIPO (PCT)
Prior art keywords
dab
leu
deletion
ala
polypeptide
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PCT/CN2018/112889
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French (fr)
Chinese (zh)
Inventor
冯军
张喜全
路建光
东圆珍
张友
唐汉卿
徐宏江
Original Assignee
上海医药工业研究院
正大天晴药业集团股份有限公司
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Application filed by 上海医药工业研究院, 正大天晴药业集团股份有限公司 filed Critical 上海医药工业研究院
Priority to CN201880070045.2A priority Critical patent/CN111247162B/en
Publication of WO2019085926A1 publication Critical patent/WO2019085926A1/en

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    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides
    • A61K38/04Peptides having up to 20 amino acids in a fully defined sequence; Derivatives thereof
    • A61K38/12Cyclic peptides, e.g. bacitracins; Polymyxins; Gramicidins S, C; Tyrocidins A, B or C
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P31/00Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K7/00Peptides having 5 to 20 amino acids in a fully defined sequence; Derivatives thereof
    • C07K7/50Cyclic peptides containing at least one abnormal peptide link
    • C07K7/54Cyclic peptides containing at least one abnormal peptide link with at least one abnormal peptide link in the ring
    • C07K7/60Cyclic peptides containing at least one abnormal peptide link with at least one abnormal peptide link in the ring the cyclisation occurring through the 4-amino group of 2,4-diamino-butanoic acid
    • C07K7/62Polymyxins; Related peptides
    • YGENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02ATECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
    • Y02A50/00TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE in human health protection, e.g. against extreme weather
    • Y02A50/30Against vector-borne diseases, e.g. mosquito-borne, fly-borne, tick-borne or waterborne diseases whose impact is exacerbated by climate change

Definitions

  • the invention belongs to the field of medicine, relates to an antibacterial peptide and a preparation method and application thereof, and particularly relates to a group of polymyxin analogs having high antibacterial activity and a synthetic preparation and application thereof.
  • Polymyxin is a class of cyclic peptide antibiotics produced by Bacillus polymyxa discovered in 1947. It consists of various components, including polymyxin A, polymyxin B, polymyxin C, and more. Colistin D, polymyxin E, usually have a narrow antibacterial spectrum and are only resistant to Gram-negative bacteria. It is commonly used clinically to treat infections caused by Gram-negative bacteria. However, due to its severe nephrotoxicity and neurotoxicity, it is gradually replaced by other antibiotics (aminoglycosides, etc.) with low toxicity and good antibacterial effect. Until the emergence of multi-drug resistant bacteria in the past 20 years, polymyxin has once again entered the field of vision as a clinical therapeutic drug.
  • polymyxin products currently on the market are mainly polymyxin B sulfate, polymyxin E sulfate and sodium polymyxin E methanesulfonate.
  • the antibacterial activity of polymyxin B and polymyxin E is slightly different. In general, the activity of polymyxin B is stronger than that of polymyxin E (Chen Guanrong, the clinical application of polymyxin and the response to super bacteria [J]. Medical Herald, 2011, 30 (2): 135-140).
  • Natural polymyxin is generally composed of a fatty acyl chain and a cyclic heptapeptide linked by a linear tripeptide, wherein the 4-position amino acid L-Dab ( ⁇ , ⁇ -diaminobutyric acid) is condensed with the 10-position amino acid L-Thr to form a heptapeptide. ring.
  • L-Dab ⁇ , ⁇ -diaminobutyric acid
  • the structures of polymyxin B and polymyxin E are very similar, with only differences in the 6 amino acids. Among them, the 6-position amino acid of polymyxin B is D-Phe, and the 6-position amino acid of polymyxin E is D-Leu (Cui, et.al. Research Development of Polymyxins [J]. World Notes on Antibiotics, 2015 , 36(5): 205-210).
  • the invention relates to a polypeptide and a preparation method and application thereof, in particular to a group of polymyxin analogs having high antibacterial activity, and synthetic preparation and application thereof.
  • the application relates to polypeptides and pharmaceutically acceptable salts thereof, which polypeptides have at least 70% sequence identity to the sequences of Formula I.
  • the polypeptide has the following sequence: R1-Xaa1-Xaa2-Xaa3-Xaa4-Xaa5-Xaa6-Xaa7-Xaa8-Xaa9-Xaa10-Xaa11-Xaa12 (Formula I), wherein R1 is: Fat a straight or branched C 6 -C 20 acyl group or deletion; Xaa1 is: Leu, Ala, AEEAc, Phe, IPhe, BrPhe, or 3FPhe, or a deletion; Xaa2 is: Leu, Ala, Arg, or AEEAc , or deletion; Xaa3 is: Dab, Ala, Leu, or Orn, or deletion; Xaa4 is: Thr, Ala, Dab, or Lys;
  • the polypeptide is a cyclic peptide.
  • the polypeptide is formed by the condensation of Xaa6 with a side chain group of Xaa12 to form an amide linkage, and optionally, the pendant group comprises an amino group and/or a carboxyl group.
  • the polypeptide is obtained by dehydration of an amino group with a carboxyl group to form an amide bond.
  • the R 1 is selected from the group consisting of heptanoyl, methylheptanoyl, octanoyl, methyloctanoyl, decanoyl, methyl decanoyl, decanoyl, methyl decanoyl, lauroyl, myristoyl, Palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, preferably n-octanoyl, decanoyl, lauroyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, more preferably n-octanoyl or a deletion
  • Xaa1 is preferably Leu or deleted
  • Xaa2 is preferably Leu
  • Xaa3 is preferably Dab
  • Xaa3 is preferably Dab
  • Xaa4 is preferably Thr
  • Xaa4 is preferably Dab
  • polypeptide has the formula:
  • R1 is: an aliphatic straight-chain or branched C 6 -C 20 acyl group or a deletion
  • Xaa1 is: Leu, Ala, AEEAc, Phe, IPhe, BrPhe, 3FPhe or a deletion
  • Xaa2 is: Leu, Ala, Arg, AEEAc or deletion
  • Xaa3 is: Dab, Ala, Leu, Orn or deletion
  • Xaa4 is: Thr, Ala, Dab or Lys
  • Xaa5 is: Dab, Lys, Orn, Ala or deletion
  • Xaa6 is: Lys or Dab
  • Xaa7 is: Dab, Ala, Lys, Orn or deletion
  • Xaa8 is: D-Leu, D-Phe, Lys or D-Ala
  • Xaa9 is: Leu or Ala
  • Xaa10 is: Dab, Leu, Orn, Ala, D-
  • the R1 is selected from the group consisting of heptanoyl, methylheptanoyl, octanoyl, methyloctanoyl, decanoyl, methyldecanoyl, decanoyl, methyldecanoyl, lauroyl, myristoyl , palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, preferably n-octanoyl, decanoyl, lauroyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, more preferably n-octanoyl or Deletion;
  • Xaa1 is preferably Leu or deleted, Xaa2 is preferably Leu, Xaa3 is preferably Dab, Xaa3 is preferably Dab, Xaa4 is preferably Thr, Xaa5 is preferably Dab,
  • polypeptide has the formula:
  • R1 is: an aliphatic straight-chain or branched C 6 -C 20 acyl group or a deletion
  • Xaa1 is: Leu, Ala, AEEAc, Phe, IPhe, BrPhe, 3FPhe or a deletion
  • Xaa2 is: Leu, Ala, Arg, AEEAc or deletion
  • Xaa3 is: Dab, Ala, Leu, Orn or deletion
  • Xaa4 is: Thr, Ala, Dab, Lys
  • Xaa5 is: Dab, Lys, Orn, Ala or deletion
  • Xaa7 is: Dab, Ala, Lys, Orn or deletion
  • Xaa8 is: D-Leu, D-Phe, Lys, D-Ala
  • Xaa9 is: Leu, Ala
  • Xaa10 is: Dab, Leu, Orn, Ala, D-Leu or deletion
  • Xaa11 is: Da
  • polypeptide has the formula:
  • R1 is: an aliphatic straight-chain or branched C 6 -C 20 acyl group or a deletion
  • Xaa1 is: Leu, Ala, AEEAc, Phe, IPhe, BrPhe, 3FPhe or a deletion
  • Xaa2 is: Leu, Ala, Arg, AEEAc or deletion
  • Xaa3 is: Dab, Ala, Leu, Orn or deletion
  • Xaa4 is: Thr, Ala, Dab or Lys
  • Xaa5 is: Dab, Lys, Orn, Ala or deletion
  • Xaa7 is: Dab, Ala, Lys, Orn or deletion
  • Xaa8 is: D-Leu, D-Phe, Lys or D-Ala
  • Xaa9 is: Leu or Ala
  • Xaa10 is: Dab, Leu, Orn, Ala, D-Leu or deletion
  • Xa11 is: Dab
  • the R1 is selected from the group consisting of heptanoyl, methylheptanoyl, octanoyl, methyloctanoyl, decanoyl, methyldecanoyl, decanoyl, methyldecanoyl, lauroyl, myristoyl , palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, preferably n-octanoyl, decanoyl, lauroyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, more preferably n-octanoyl or Deletion;
  • Xaa1 is preferably Leu or deleted, Xaa2 is preferably Leu, Xaa3 is preferably Dab, Xaa4 is preferably Dab, Xaa4 is preferably Thr, Xaa5 is preferably Dab,
  • the polypeptide is a peptide or cyclic peptide consisting of the sequence represented by R1-Leu-Dab-Thr-Dab-Xaa6-Dab-Xaa8-Leu-Dab-Dab-Glu, wherein R1 is preferably n-octanoyl , decanoyl, lauroyl, palmitoyl, 17-carboxyheptadecanoyl or a deletion, more preferably n-octanoyl or a deletion; Xaa6 is preferably Lys or Dab, and Xaa8 is preferably D-Phe or D-Leu.
  • the polypeptide is a peptide or cyclic peptide consisting of the sequence represented by R1-Dab-Thr-Dab-Xaa6-Dab-Xaa8-Leu-Dab-Dab-Glu, wherein R1 is preferably n-octane Acyl, decanoyl, lauroyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, more preferably n-octanoyl or a deletion; Xaa6 is preferably Lys or Dab, and Xaa8 is preferably D-Phe or D-Leu.
  • the polypeptide comprises the sequence H 2 N-Leu-Dab-Thr-Dab-Lys-Dab-D-Phe-Leu-Dab-Dab-Glu, or the sequence H 2 N-Dab- A peptide or cyclic peptide of Thr-Dab-Lys-Dab-D-Phe-Leu-Dab-Dab-Glu.
  • the polypeptide of the invention comprises at least 60%, 65%, 70%, 75%, 80%, 85%, 90%, 91%, 92%, 93%, 94%, 95 with the above polypeptide. %, 96%, 97%, 98%, 99% sequence identity amino acid sequence.
  • the polypeptide of the invention has an amino acid sequence of at least 1, 2, 3, 4, 5, 6 amino acid additions, substitutions, and/or deletions as compared to the polypeptide described above.
  • the polypeptide of the invention has at least 1, 2, 3, 4, 5, 6 amino acid substitutions compared to the above polypeptide, wherein the substitution can be a conservative substitution, And/or approximate replacement.
  • the polypeptide of the invention is a truncated amino acid of six, seven, eight, nine, ten, eleven amino acid lengths of the above polypeptide.
  • polypeptides provided herein are a low toxicity polypeptide.
  • the application also provides the use of the aforementioned polypeptide or a pharmaceutically acceptable salt thereof.
  • the polypeptides of the present invention can be used for bacteriostatic, antibacterial or antibacterial substances.
  • the antimicrobial substance is an antimicrobial or antimicrobial agent.
  • the bacterium is a bacterium or a fungus. It is particularly surprising that the polypeptides of the invention can be used against anti-negative or anti-resistant bacteria, or for the preparation of anti-negative or anti-resistant bacteria.
  • the bacterium, fungus or drug resistant bacterium is Acinetobacter baumanii, drug resistant Acinetobacter baumanii, Pseudomonas aeruginosa, resistant One or more of Pseudomonas aeruginosa, Bacillus subtilis, Staphylococcus aureus, E.
  • coli and/or candida Albicans, More preferably, it is Pseudomonas aeruginosa, a drug-resistant Acinetobacter baumannii, and a drug-resistant Pseudomonas aeruginosa.
  • the invention relates to an antimicrobial substance.
  • the antimicrobial substance is an antimicrobial or antimicrobial agent.
  • the antibacterial substance or the microbial agent of the present invention includes the polypeptide of the present invention, and one or more of a pharmaceutically acceptable salt and/or a carrier and an excipient.
  • the present application is directed to a pharmaceutical composition
  • a pharmaceutical composition comprising a polypeptide of the present application, or a pharmaceutically acceptable salt thereof.
  • the pharmaceutical compositions of the present application further comprise a pharmaceutically acceptable excipient, diluent or carrier.
  • the present application relates to the use of the polypeptide or a pharmaceutically acceptable salt thereof for the manufacture of a medicament and/or a pharmaceutical composition for preventing or treating an infectious disease.
  • the present application relates to a method of treating a disease in a mammal comprising administering to a mammal in need of such treatment, preferably a human, a therapeutically effective amount of a polypeptide of the invention, or a pharmaceutically acceptable salt thereof, or a pharmaceutical combination thereof Things.
  • the above combination therapies can be administered in the following manner: (a) a single pharmaceutical composition comprising a polypeptide of the present application, at least one additional therapeutic agent described herein, and a pharmaceutically acceptable excipient, diluent or carrier; Or (b) two separate pharmaceutical compositions comprising (i) a first composition comprising a polypeptide of the present application and a pharmaceutically acceptable excipient, diluent or carrier, and (ii) comprising at least one An additional therapeutic agent and a second composition of a pharmaceutically acceptable excipient, diluent, or carrier.
  • the pharmaceutical compositions can be administered simultaneously or sequentially and in any order.
  • the invention relates to a set of polypeptides or pharmaceutically acceptable salts thereof, the amino acid sequences of which are as follows:
  • polypeptide is a cyclic peptide having the amino acid sequence shown below:
  • R1 is: an aliphatic straight or branched C 6 -C 20 acyl group or a deletion
  • Xaa1 is: Leu, Ala, AEEAc, Phe, IPhe, BrPhe, 3FPhe or deletion;
  • Xaa2 is: Leu, Ala, Arg, AEEAc or deletion;
  • Xaa3 is: Dab, Ala, Leu, Orn or missing;
  • Xaa4 is: Thr, Ala, Dab, Lys;
  • Xaa5 is: Dab, Lys, Orn, Ala or missing;
  • Xaa6 is: Lys, Glu, Dab;
  • Xaa7 is: Dab, Ala, Lys, Orn or missing;
  • Xaa8 is: D-leu, D-Phe, Lys, D-Ala;
  • Xaa9 is: Leu, Ala;
  • Xaa10 is: Dab, Leu, Orn, Ala, D-Leu or deletion;
  • Xaa11 is: Dab, Leu, Orn, Ala, D-Leu or deletion;
  • Xaa12 is: Glu, Lys, Asp;
  • the R1 is selected from the group consisting of heptanoyl, methylheptanoyl, octanoyl, methyloctanoyl, decanoyl, methyldecanoyl, decanoyl, methyldecanoyl, lauroyl, meat Myristoyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion
  • Xaa1 is preferably Leu or deleted
  • Xaa2 is preferably Leu
  • Xaa3 is preferably Dab
  • Xaa4 is preferably Thr
  • Xaa5 is preferably Dab
  • Xaa6 is preferably Lys or Dab
  • Xaa7 is preferably Dab
  • Xaa8 is preferably D-Phe or D-Leu
  • Xaa9 is preferably Leu
  • Xaa10 is preferably Dab
  • Xaa11 is preferably
  • amino acid residues of the polypeptides involved in the present invention include natural amino acids and unnatural amino acids, wherein the three-letter codes corresponding to the natural amino acids involved are shown in Table 1, the unnatural amino acids involved and the corresponding letter codes and The structure is shown in Table 2.
  • the amino acid according to the present invention is an L-form amino acid by default unless it is specifically limited.
  • the polypeptide of the present invention is a cyclic peptide which is obtained by dehydration of an amino group (or a carboxyl group) of a Xaa6 and Xaa12 side chain with a carboxyl group (or an amino group) to form an amide bond.
  • the peptides of the present invention may have a C-terminus either in the form of a carboxyl group or in the form of an amide, preferably in the form of an amide.
  • a cyclic peptide (ZAMP18) is disclosed, the amino acid sequence of which is:
  • a further preferred embodiment of the invention discloses a cyclic peptide with a fatty chain (ZAMP29) having an amino acid sequence of:
  • a group of cyclic peptides CTAMP-41, CTAMP-42, CTAMP-43, CTAMP-44, CTAMP-45, CTAMP-46, CTAMP-47, ZAMP-3, ZAMP-4 are disclosed.
  • the polypeptide of the invention may be a peptide having a linear primary structure, and in another aspect, the polypeptide of the invention may be a cyclic peptide.
  • the polypeptide of the invention comprises at least 60%, 65%, 70%, 75%, 80%, 85%, 90%, 91%, 92 of the peptide or cyclic peptide shown in any of the above sequences. %, 93%, 94%, 95%, 96%, 97%, 98%, 99% sequence identity amino acid sequence.
  • the polypeptide of the invention comprises a addition, substitution and/or deletion of at least 1, 2, 3, 4, 5, 6 amino acids with a polypeptide as set forth in any of the above sequences. Amino acid sequence.
  • the polypeptide of the invention comprises a substitution of at least 1, 2, 3, 4, 5, 6 amino acids with a polypeptide as set forth in any of the above sequences, wherein the substitution may be Conservative substitutions, and/or approximate replacements.
  • the polypeptide of the invention is a continuous truncation of six, seven, eight, nine, ten, eleven amino acid lengths of the polypeptide shown in any of the above sequences.
  • the invention also provides a process for the preparation of the above peptide or cyclic peptide.
  • the method comprises: synthesizing the polypeptide.
  • the above polypeptides can be prepared using solid phase synthesis techniques, including:
  • step (1) The product of the step (1) is cleaved with a strong acid; a side chain protecting group scavenger is added, filtered, and the polypeptide is precipitated with 5-20 volumes of an organic solvent, centrifuged, and the organic solvent is repeatedly washed and precipitated, and dried to obtain a crude peptide.
  • step (1) comprises the following steps:
  • the amino protecting group refers to a chemical group introduced to protect the amino group involved in the condensation reaction.
  • the amino protecting group includes, but is not limited to, t-butoxycarbonyl (Boc), benzyloxycarbonyl (Z) or 9-fluorenyl-methoxycarbonyl (Fmoc), preferably 9-fluorenyl-methoxycarbonyl (Fmoc).
  • Arg can be protected with pentamethylbenzofuran-5-sulfonyl (Pbf); Dab, Orn can be tert-butoxycarbonyl ( Boc) protection; Thr can be protected with tert-butyl (tBu).
  • Fmoc-L-Dab(Boc)-OH has the structure shown below:
  • the protecting group includes, but is not limited to, a reasonable selection according to a specific situation.
  • the solvent used in the liquid phase environment of the step (a) is selected from the group consisting of dimethylformamide (DMF), dichloromethane (DCM), N-methylpyrrolidone (NMP), preferably DMF.
  • DMF dimethylformamide
  • DCM dichloromethane
  • NMP N-methylpyrrolidone
  • the removal of the amino protecting group in the step (a) requires the removal of the amino protecting group, and the removal agent of the amino protecting group is selected from piperidine (PIP) solution at a concentration of 10-40% (PIP/DMF).
  • PIP piperidine
  • the time is 20-50 min; the preferred concentration is 20-25% (PIP/DMF) and the removal time is 25-35 min.
  • the coupling of the amino acid in the step (a) requires the addition of a coupling reagent consisting of a carbodiimide type reagent or a benzotriazole salt type reagent and 1-hydroxybenzotriazole (HOBt). .
  • the carbodiimide type reagent includes, but is not limited to, dicyclohexylcarbodiimide (DCC), diisopropylcarbodiimide (DIC) or N-diaminopropyl-N-ethylcarbodiimide. (EDC).
  • DCC dicyclohexylcarbodiimide
  • DIC diisopropylcarbodiimide
  • EDC N-diaminopropyl-N-ethylcarbodiimide.
  • the benzotriazolium salt type reagent includes, but is not limited to, 2-(1H-benzotriazo L-1-yl)-1,1,3,3-tetramethyluronium tetrafluoroborate (TBTU), O-benzotriazole-N,N,N',N'-tetramethylurea hexafluorophosphate (HBTU), benzotriazole-1-oxotris(dimethylamino) hexafluorophosphate Phosphorus (BOP) or benzotriazol-1-yl-oxytripyrrolidinylphosphonium hexafluorophosphate (PyBOP).
  • TBTU 2-(1H-benzotriazo L-1-yl)-1,1,3,3-tetramethyluronium tetrafluoroborate
  • HBTU O-benzotriazole-N,N,N',N'-tetramethylurea hexafluorophosphate
  • BOP
  • the coupling reagent is preferably diisopropylcarbodiimide (DIC) and 1-hydroxybenzotriazole (HOBt), or 2-(1H-benzotriazo L-1-yl)-1,1. , 3,3-tetramethyluronium tetrafluoroborate (TBTU) and 1-hydroxybenzotriazole (HOBt), further preferably DIC (diisopropylcarbodiimide) and 1-hydroxybenzotriazole (HOBt).
  • the "monitoring” in step (a) uses a ninhydrin assay to monitor the condensation reaction of the polypeptide.
  • the sequential linking of amino acids in the step (a) means that the amino acids are linked one by one from the C-terminus to the N-terminus according to the amino acid sequence of the polypeptide.
  • the cyclized amino acid in the step (b) is Xaa6 and Xaa12, and a ring is formed by forming an amide bond between a side chain amino group and a carboxyl group.
  • step (b) an orthogonal protection strategy is employed for the ring formation, the amino protecting group on the side chain of the ring-forming amino acid is allyloxycarbonyl (Alloc), and the carboxyl protecting group is allyl (OAll).
  • step (b) requires the addition of a remover, and the remover used is tetrakis(triphenylphosphine)palladium ((Pd(PPh 3 ) 4 )).
  • step (b) requires the addition of a scavenger, and the scavenger may be selected from H 3 N ⁇ BH 3 , Me 2 NH ⁇ BH 3 or PhSiH 3 , preferably PhSiH 3 .
  • the cyclization reaction in the step (b) requires the addition of a coupling reagent consisting of a carbodiimide type reagent or a tertiary amine type and a benzotriazole salt type reagent or a pyridine triazolium salt type.
  • carbodiimide type reagent includes, but is not limited to, dicyclohexylcarbodiimide (DCC), diisopropylcarbodiimide (DIC) or N-diaminopropyl-N-ethylcarbamate Imine (EDC).
  • DCC dicyclohexylcarbodiimide
  • DIC diisopropylcarbodiimide
  • EDC N-diaminopropyl-N-ethylcarbamate Imine
  • the tertiary amine type reagents include, but are not limited to, N,N-diisopropylethylamine (DIEA).
  • the benzotriazolium salt type reagent includes, but is not limited to, 2-(1H-benzotriazo L-1-yl)-1,1,3,3-tetramethyluronium tetrafluoroborate (TBTU), O-benzotriazole-N,N,N',N'-tetramethylurea hexafluorophosphate (HBTU), benzotriazole-1-oxotris(dimethylamino) hexafluorophosphate Phosphorus (BOP) or benzotriazol-1-yl-oxytripyrrolidinylphosphonium hexafluorophosphate (PyBOP).
  • TBTU 2-(1H-benzotriazo L-1-yl)-1,1,3,3-tetramethyluronium tetrafluoroborate
  • HBTU O-benzotriazole-N,N,N',N'-tetramethylurea hexafluorophosphate
  • BOP
  • the pyridine triazolium salt type includes, but is not limited to, (3H-1,2,3-triazolo[4,5-b]pyridin-3-yloxy)tri-1-pyrrolidinyl hexafluorophosphate (PyAOP), 2-(7-azobenzotriazole)-N,N,N',N'-tetramethyluronium hexafluorophosphate (HATU), 7-azabenzotriazole-1 - methoxytris(dimethylamino)phosphine hexafluorophosphate (AOP).
  • the coupling reagent is preferably diisopropylcarbodiimide (DIC) and 1-hydroxybenzotriazole (HOBt), or 2-(1H-benzotriazo L-1-yl)-1,1. , 3,3-tetramethylurea tetrafluoroborate (TBTU) and 1-hydroxybenzotriazole (HOBt) or N,N-diisopropylethylamine (DIEA) and 2-(7-azo Benzotriazole)-N,N,N',N'-tetramethylurea hexafluorophosphate (HATU).
  • DIC diisopropylcarbodiimide
  • HOBt 1-hydroxybenzotriazole
  • TBTU 3,3-tetramethylurea tetrafluoroborate
  • DIEA N,N-diisopropylethylamine
  • DIEA N,N-diisopropylethylamine
  • HATU 2-(7-azobenzotriazole)-N,N,N',N'-tetramethyluronium hexafluorophosphate
  • the step (1) further comprises: (c) the resin peptide obtained in the step (b) is linked to a fatty acid chain, which may be a mono-, di- or other polybasic fatty acid chain.
  • the coupling agent in the step (c) is diisopropylcarbodiimide (DIC) and 1-hydroxybenzotriazole (HOBt), and the reaction solvent is DMF.
  • the side chain protecting group scavenger according to the step (2) includes, but not limited to, thioanisole, triisopropylsilane, phenol, water, 1,2-ethanedithiol, m-cresol or any two or two of the above
  • the above combination is prepared and prepared by trifluoroacetic acid or hydrofluoric acid at 5-20% (V/V).
  • the step (1) is carried out by using Wang resin; if the C-terminus of the polypeptide of the present invention is in the form of an amide, the step (1) is synthesized by using Rink Amide MBHA resin. .
  • polypeptide preparation method provided by the present invention may further comprise a purification step in order to meet the quality requirements for medical use.
  • Purification methods employed include, but are not limited to, reverse phase chromatography or ion exchange chromatography, preferably reverse phase chromatography.
  • the in vitro antibacterial activity of the polypeptides of the invention can be identified by determining its minimum inhibitory concentration (MIC).
  • MIC minimum inhibitory concentration
  • NCCLS American Clinical Laboratory Standardization Committee
  • MH Mueller-Hinton
  • RPMI-1640 modified RPMI-1640. base.
  • Amphotericin B, polymyxin E sulfate and vancomycin hydrochloride were used as positive controls.
  • antimicrobial peptides provided by the present invention have higher antibacterial activity, particularly anti-negative bacteria (such as Pseudomonas aeruginosa) or anti-resistant bacteria (such as drug-resistant Acinetobacter baumannii, drug-resistant patina)
  • anti-negative bacteria such as Pseudomonas aeruginosa
  • anti-resistant bacteria such as drug-resistant Acinetobacter baumannii, drug-resistant patina
  • aliphatic straight-chain or branched C 6 -C 20 acyl group means a substituent containing a carbonyl group moiety and a non-carbonyl group moiety, and the non-carbonyl group includes an aliphatic straight chain or a branch.
  • Chain groups include, but are not limited to, alkyl groups, cycloalkyl groups, alkene groups, and alkynyl groups.
  • the invention includes, but is not limited to, acyl groups found in known polymyxin compounds, including heptanoyl, methylheptanoyl (including (S)-6-methylheptanoyl), octanoyl, methyl octyl Acyl (including (S)-6-methyloctanoyl, (S)-7-methyloctanoyl), decanoyl, methyldecanoyl (including (S)-6-methyldecanoyl, (S)- 7-methyldecanoyl and (S)-8-methyldecanoyl) and decanoyl.
  • acyl groups found in known polymyxin compounds including heptanoyl, methylheptanoyl (including (S)-6-methylheptanoyl), octanoyl, methyl octyl Acyl (including (S)-6-methyloctanoyl, (S)-7-methyloc
  • lauroyl, palmitoyl, myristoyl and 17-carboxylic acid-heptadecanoyl are also included.
  • the "lauroyl”, “palmitoyl” and “myristoyl” refer to a hydroxy group in lauric acid, palmitic acid, and myristic acid substituted.
  • the 17-carboxylic acid-heptadecanoyl group generally means:
  • fatty acid chain refers to a substituent comprising an aliphatic straight or branched chain moiety and one, two or more carboxyl group moieties including, but not limited to, an alkyl group, a ring An alkyl group, an alkene group, an alkynyl group or the like, the one, two or more carboxyl group moieties are meant to comprise a monocarboxyl group, a dicarboxyl group or more, and the term “monobasic fatty acid chain” means a substituent comprising an aliphatic straight or branched chain moiety and a carboxyl group moiety, the term “dibasic fatty acid chain” means a substituent comprising an aliphatic straight or branched chain moiety and two carboxyl group moieties, the term “ “polybasic fatty acid chain” means a substituent comprising an aliphatic straight or branched chain moiety and a plurality of carboxyl group moieties
  • substituted means that any one or more hydrogen atoms on a particular atom are replaced by a substituent as long as the valence of the particular atom is normal and the substituted compound is stable.
  • an ethyl group “optionally” substituted with halo refers to an ethyl group may be unsubstituted (CH 2 CH 3), monosubstituted (e.g., CH 2 CH 2 F), polysubstituted (e.g. CHFCH 2 F, CH 2 CHF 2, etc.) or completely substituted (CF 2 CF 3 ). It will be understood by those skilled in the art that for any group containing one or more substituents, no substitution or substitution pattern that is sterically impossible to exist and/or which cannot be synthesized is introduced.
  • C mn means having mn carbon atoms in this moiety.
  • carbon 3-10 cycloalkyl means that the cycloalkyl has 3 to 10 carbon atoms.
  • Carbon 0-6 alkylene means that the alkylene group has 0 to 6 carbon atoms, and when the alkylene group has 0 carbon atoms, the group is a bond.
  • C1-6 means that the group may have 1 carbon atom, 2 carbon atoms, 3 carbon atoms, 4 carbon atoms, 5 carbon atoms or 6 carbon atoms.
  • any variable eg, R
  • its definition in each case is independent.
  • each R has an independent option.
  • halo or halogen refers to fluoro, chloro, bromo and iodo.
  • acyl refers to a -CO- group.
  • hydroxy refers to an -OH group.
  • cyano refers to a -CN group.
  • mercapto refers to a -SH group.
  • amino means -NH 2 group.
  • nitro refers to a -NO 2 group.
  • alkyl refers to a hydrocarbon group of the formula C n H 2n +.
  • the alkyl group can be straight or branched.
  • hydrocarbon 1 - 6 alkyl refers to a monovalent straight or branched aliphatic group containing from 1 to 6 carbon atoms (eg, methyl, ethyl, n-propyl, isopropyl, n-butyl, Isobutyl, sec-butyl, tert-butyl, n-pentyl, 1-methylbutyl, 2-methylbutyl, 3-methylbutyl, neopentyl, 3,3-dimethylpropyl , hexyl, 2-methylpentyl, etc.).
  • alkyl moiety i.e., alkyl
  • an alkoxy group an alkylamino group, a dialkylamino group, an alkylsulfonyl group, and an alkylthio group
  • alkyl i.e., alkyl
  • alkoxy refers to -O-alkyl
  • alkylthio refers to -S-alkyl.
  • alkylamino refers to -NH(alkyl).
  • dialkylamino refers to -N(alkyl) 2 .
  • alkenyl refers to a straight or branched unsaturated aliphatic hydrocarbon group having at least one double bond consisting of a carbon atom and a hydrogen atom.
  • alkenyl groups include, but are not limited to, ethenyl, 1-propenyl, 2-propenyl, 1-butenyl, isobutenyl, 1,3-butadienyl, and the like.
  • alkynyl means a straight or branched unsaturated aliphatic hydrocarbon group having at least one triple bond composed of a carbon atom and a hydrogen atom.
  • alkynyl groups include, but are not limited to, ethynyl (-C a carbon atom), 1-propynyl (-C group (atoms, and 3), 2-propynyl (-CH 2 -CH (original) And 1,3-butadiynyl (-C alkynyl (sub and hydrogen) and the like.
  • cycloalkyl refers to a carbocyclic ring that is fully saturated and can exist as a single ring, fused ring or spiro ring. Unless otherwise indicated, the carbocyclic ring is typically a 3 to 10 membered ring, preferably a 3 to 8 membered ring.
  • Non-limiting examples of cycloalkyl groups include, but are not limited to, cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, norbornyl (bicyclo[2.2.1]heptyl), bicyclo[2.2.2]octyl, diamond Alkyl and the like.
  • aryl refers to an all-carbon monocyclic or fused polycyclic aromatic ring group having a conjugated ⁇ -electron system.
  • an aryl group can have 6-20 carbon atoms, 6-14 carbon atoms or 6-12 carbon atoms.
  • Non-limiting examples of aryl groups include, but are not limited to, phenyl, naphthyl, anthracenyl, and the like.
  • heteroaryl refers to a monocyclic or fused polycyclic ring system containing at least one ring atom selected from N, O, S, the remaining ring atoms being C, and having at least one aromatic ring.
  • Preferred heteroaryl groups have a single 4 to 8 membered ring, especially a 5 to 8 membered ring, or a plurality of fused rings containing from 6 to 14, especially from 6 to 10 ring atoms.
  • heteroaryl groups include, but are not limited to, pyrrolyl, furyl, thienyl, imidazolyl, oxazolyl, pyrazolyl, pyridyl, pyrimidinyl, pyrazinyl, quinolinyl, isoquinolinyl , tetrazolyl, triazolyl, triazinyl, benzofuranyl, benzothienyl, fluorenyl, isodecyl and the like.
  • treating means administering a compound or formulation described herein to prevent, ameliorate or eliminate a disease or one or more symptoms associated with the disease, and includes:
  • terapéuticaally effective amount means (i) treating or preventing a particular disease, condition or disorder, (ii) alleviating, ameliorating or eliminating one or more symptoms of a particular disease, condition or disorder, or (iii) preventing or delaying The amount of a compound of the present application in which one or more symptoms of a particular disease, condition, or disorder are described herein.
  • the amount of a compound of the present application which constitutes a “therapeutically effective amount” will vary depending on the compound, the condition and severity thereof, the mode of administration, and the age of the mammal to be treated, but can be routinely determined by those skilled in the art It is determined by its own knowledge and the present disclosure.
  • pharmaceutically acceptable is for those compounds, materials, compositions and/or dosage forms that are within the scope of sound medical judgment and are suitable for use in contact with human and animal tissues without Many toxic, irritating, allergic reactions or other problems or complications are commensurate with a reasonable benefit/risk ratio.
  • a metal salt, an ammonium salt, a salt with an organic base, a salt with an inorganic acid, a salt with an organic acid, a salt with a basic or acidic amino acid, or the like can be mentioned.
  • metal salts include, but are not limited to, salts of alkali metals such as sodium salts, potassium salts, and the like; salts of alkaline earth metals such as calcium salts, magnesium salts, barium salts, and the like; aluminum salts and the like.
  • Non-limiting examples of salts formed with organic bases include, but are not limited to, with trimethylamine, triethylamine, pyridine, picoline, 2,6-lutidine, ethanolamine, diethanolamine, triethanolamine, cyclohexylamine, A salt formed by dicyclohexylamine or the like.
  • Non-limiting examples of salts formed with inorganic acids include, but are not limited to, salts formed with hydrochloric acid, hydrobromic acid, nitric acid, sulfuric acid, phosphoric acid, and the like.
  • Non-limiting examples of salts formed with organic acids include, but are not limited to, with formic acid, acetic acid, trifluoroacetic acid, fumaric acid, oxalic acid, malic acid, maleic acid, tartaric acid, citric acid, succinic acid, methanesulfonic acid, benzene. a salt formed of a sulfonic acid, p-toluenesulfonic acid or the like.
  • Non-limiting examples of salts formed with basic amino acids include, but are not limited to, salts formed with arginine, lysine, ornithine, and the like.
  • Non-limiting examples of salts formed with acidic amino acids include, but are not limited to, salts formed with aspartic acid, glutamic acid, and the like.
  • pharmaceutical composition refers to one or more compounds of the present application, or salts thereof, and excipients, diluents, or agents generally accepted in the art for delivery of a biologically active compound to an organism (eg, a human), or Formulation of the carrier.
  • the purpose of the pharmaceutical composition is to facilitate administration of the compounds of the present application to an organism.
  • pharmaceutically acceptable excipient, diluent, or carrier refers to those excipients, diluents, or carriers that do not significantly irritate the organism and which do not impair the biological activity and properties of the active compound.
  • Suitable carriers, diluents and excipients are well known to those skilled in the art and include, for example, carbohydrates, waxes, water soluble and/or water swellable polymers, hydrophilic or hydrophobic materials, gelatin, oil, Raw materials such as solvents and water.
  • the present application also includes isotopically labeled compounds of the present application which are identical to those described herein, but wherein one or more atoms are replaced by an atom having a different atomic weight or mass than the atomic or mass number normally found in nature.
  • isotopes that may be incorporated into the compounds of the present application include isotopes of hydrogen, carbon, nitrogen, oxygen, phosphorus, sulfur, fluorine, iodine, and chlorine, such as 2 H, 3 H, 11 C, 13 C, 14 C, 13 respectively.
  • isotopically-labeled compounds of the present application can be used in compound and/or substrate tissue distribution assays.
  • Deuterated (i.e., 3 H) and carbon-14 (i.e., 14 C) isotopes are especially preferred for their ease of preparation and detectability.
  • substitution with heavier isotopes such as deuterium (ie, 2 H) can provide certain therapeutic advantages resulting from higher metabolic stability (eg, increased in vivo half-life or reduced dosage requirements), and thus in some cases The following may be preferred.
  • Positron emitting isotopes such as 15 O, 13 N, 11 C and 18 F can be used in positron emission tomography (PET) studies to determine substrate occupancy.
  • Isotopically labeled compounds of the present application can generally be prepared by substituting an isotopically labeled reagent for an unisotopically labeled reagent by procedures similar to those disclosed in the schemes and/or examples disclosed below.
  • the compounds of the present application can be prepared by a variety of synthetic methods well known to those skilled in the art, including the specific embodiments listed below, combinations thereof with other chemical synthesis methods, and those well known to those skilled in the art. Equivalent alternatives, preferred embodiments include, but are not limited to, embodiments of the present application.
  • the invention includes, but is not limited to, the following:
  • polypeptide or a pharmaceutically acceptable salt thereof which polypeptide has at least 70% sequence identity to the sequence of Formula I:
  • R1 is: an aliphatic straight-chain or branched C 6 -C 20 acyl group or a deletion
  • Xaa1 is: Leu, Ala, AEEAc, Phe, IPhe, BrPhe, 3FPhe or deletion;
  • Xaa2 is: Leu, Ala, Arg, AEEAc or deletion;
  • Xaa3 is: Dab, Ala, Leu, Orn or missing;
  • Xaa4 is: Thr, Ala, Dab or Lys
  • Xaa5 is: Dab, Lys, Orn, Ala or missing;
  • Xaa6 is: Lys, Glu or Dab;
  • Xaa7 is: Dab, Ala, Lys, Orn or missing;
  • Xaa8 is: D-Leu, D-Phe, Lys or D-Ala;
  • Xaa9 is: Leu or Ala
  • Xaa10 is: Dab, Leu, Orn, Ala, D-Leu or deletion;
  • Xaa11 is: Dab, Leu, Orn, Ala, D-Leu or deletion;
  • Xaa12 is: Glu, Lys or Asp.
  • polypeptide of claim 1 or a pharmaceutically acceptable salt thereof, wherein the polypeptide is a cyclic peptide.
  • polypeptide according to any one of items 1 to 2, wherein the polypeptide is obtained by dehydration of Xaa6 and a side chain group of Xaa12 to form an amide bond, optionally, the side chain group.
  • the group contains an amino group and/or a carboxyl group.
  • R1 is selected from the group consisting of heptanoyl, methylheptanoyl, octanoyl, methyloctanoyl, decanoyl, methyl decanoyl, hydrazine Acyl, methyl decanoyl, lauroyl, myristoyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, preferably n-octanoyl, decanoyl, lauroyl, palmitoyl, 17-carboxylic acid-ten Heptanoyl or deletion, more preferably n-octanoyl or deletion;
  • Xaa1 is preferably Leu or deleted, Xaa2 is preferably Leu, Xaa3 is preferably Dab, Xaa4 is preferably Thr, Xaa5 is preferably Dab, Xaa1 is preferably Leu or deleted, Xaa
  • R1 is: an aliphatic straight-chain or branched C 6 -C 20 acyl group or a deletion
  • Xaa1 is: Leu, Ala, AEEAc, Phe, IPhe, BrPhe, 3FPhe or deletion;
  • Xaa2 is: Leu, Ala, Arg, AEEAc or deletion;
  • Xaa3 is: Dab, Ala, Leu, Orn or missing;
  • Xaa4 is: Thr, Ala, Dab or Lys
  • Xaa5 is: Dab, Lys, Orn, Ala or missing;
  • Xaa6 is: Lys or Dab
  • Xaa7 is: Dab, Ala, Lys, Orn or missing;
  • Xaa8 is: D-Leu, D-Phe, Lys or D-Ala;
  • Xaa9 is: Leu or Ala
  • Xaa10 is: Dab, Leu, Orn, Ala, D-Leu or deletion;
  • Xaa11 is: Dab, Leu, Orn, Ala, D-Leu or deletion.
  • R1 is selected from the group consisting of heptanoyl, methylheptanoyl, octanoyl, methyloctanoyl, decanoyl, methyldecanoyl, decanoyl, methyl Decanoyl, lauroyl, myristoyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, preferably n-octanoyl, decanoyl, lauroyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or Deletion, more preferably n-octanoyl or deletion;
  • Xaa1 is preferably Leu or deletion
  • Xaa2 is preferably Leu
  • Xaa3 is preferably Dab
  • Xaa4 is preferably Dab
  • Xaa4 is preferably Thr
  • Xaa5 is preferably Da
  • R1 is: an aliphatic straight-chain or branched C 6 -C 20 acyl group or a deletion
  • Xaa1 is: Leu, Ala, AEEAc, Phe, IPhe, BrPhe, 3FPhe or deletion;
  • Xaa2 is: Leu, Ala, Arg, AEEAc or deletion;
  • Xaa3 is: Dab, Ala, Leu, Orn or missing;
  • Xaa4 is: Thr, Ala, Dab or Lys
  • Xaa5 is: Dab, Lys, Orn, Ala or missing;
  • Xaa7 is: Dab, Ala, Lys, Orn or missing;
  • Xaa8 is: D-Leu, D-Phe, Lys or D-Ala;
  • Xaa9 is: Leu or Ala
  • Xaa10 is: Dab, Leu, Orn, Ala, D-Leu or deletion;
  • Xaa11 is: Dab, Leu, Orn, Ala, D-Leu or deletion;
  • Xaa12 is: Glu or Asp.
  • R1 is selected from the group consisting of heptanoyl, methylheptanoyl, octanoyl, methyloctanoyl, decanoyl, methyldecanoyl, decanoyl, methylhydrazine Acyl, lauroyl, myristoyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, preferably n-octanoyl, decanoyl, lauroyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion More preferably, it is n-octanoyl or a deletion; Xaa1 is preferably Leu or a deletion, Xaa2 is preferably Leu, Xaa3 is preferably Dab, Xaa3 is preferably Dab, Xaa1
  • R1 is: an aliphatic straight-chain or branched C 6 -C 20 acyl group or a deletion
  • Xaa1 is: Leu, Ala, AEEAc, Phe, IPhe, BrPhe, 3FPhe or deletion;
  • Xaa2 is: Leu, Ala, Arg, AEEAc or deletion;
  • Xaa3 is: Dab, Ala, Leu, Orn or missing;
  • Xaa4 is: Thr, Ala, Dab or Lys
  • Xaa5 is: Dab, Lys, Orn, Ala or missing;
  • Xaa7 is: Dab, Ala, Lys, Orn or missing;
  • Xaa8 is: D-Leu, D-Phe, Lys or D-Ala;
  • Xaa9 is: Leu or Ala
  • Xaa10 is: Dab, Leu, Orn, Ala, D-Leu or deletion;
  • Xaa11 is: Dab, Leu, Orn, Ala, D-Leu or deletion.
  • polypeptide according to any one of items 1 to 4, wherein the polypeptide is represented by R1-Leu-Dab-Thr-Dab-Xaa6-Dab-Xaa8-Leu-Dab-Dab-Glu a sequence consisting of a peptide or a cyclic peptide, wherein R1 is preferably n-octanoyl, decanoyl, lauroyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, more preferably n-octanoyl or a deletion; Xaa6 is preferably Lys Or Dab, Xaa8 is preferably D-Phe or D-Leu.
  • polypeptide according to item 11 or a pharmaceutically acceptable salt thereof, which is a peptide consisting of H 2 N-Leu-Dab-Thr-Dab-Lys-Dab-D-Phe-Leu-Dab-Dab-Glu Or a cyclic peptide.
  • polypeptide of claim 12 or a pharmaceutically acceptable salt thereof, the amino acid sequence of the polypeptide is as follows:
  • polypeptide according to any one of items 1 to 4, wherein the polypeptide is a sequence represented by R1-Dab-Thr-Dab-Xaa6-Dab-Xaa8-Leu-Dab-Dab-Glu A peptide or cyclic peptide consisting of wherein R1 is preferably n-octanoyl, decanoyl, lauroyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, more preferably n-octanoyl or a deletion; Xaa6 is preferably Lys or Dab Xaa8 is preferably D-Phe or D-Leu.
  • polypeptide according to item 14 or a pharmaceutically acceptable salt thereof, which is a peptide or a ring consisting of n-octanoyl-Dab-Thr-Dab-Lys-Dab-D-Phe-Leu-Dab-Dab-Glu Peptide.
  • polypeptide of claim 15 or a pharmaceutically acceptable salt thereof, the amino acid sequence of the polypeptide being as follows:
  • polypeptide of clause 1-3 or a pharmaceutically acceptable salt thereof, the amino acid sequence of the polypeptide having at least 70% sequence identity to one of the following sequences:
  • step (1) The product of the step (1) is cleaved with a strong acid; a side chain protecting group scavenger is added, filtered, and the polypeptide is precipitated with 5-20 volumes of an organic solvent, centrifuged, washed with an organic solvent, and dried to obtain a crude peptide.
  • step (1) is performed in a liquid phase environment, and specifically comprises:
  • step (a) the solvent used in the liquid phase environment of step (a) is selected from the group consisting of: dimethylformamide (DMF), dichloromethane (DCM), N-methylpyrrolidone (NMP), Preference is given to DMF;
  • the amino protecting group is selected from the group consisting of tert-butoxycarbonyl (Boc), benzyloxycarbonyl (Z) or 9-fluorenyl-methoxycarbonyl (Fmoc), preferably 9-fluorenyl-methoxycarbonyl (Fmoc).
  • a coupling reagent consisting of a carbodiimide type reagent or a benzotriazine.
  • Imidazolium salt type reagent and 1-hydroxybenzotriazole HBt
  • DIC diisopropylcarbodiimide
  • HBt 1-hydroxybenzotriazole
  • TBTU 2-(1H-benzene And trisazo-l-1-yl)-1,1,3,3-tetramethyluronium tetrafluoroborate
  • HBt 1-hydroxybenzotriazole
  • DIC diisopropylcarbodiimide
  • 1-hydroxybenzotriazole 2-(1H-benzene And trisazo-l-1-yl)-1,1,3,3-tetramethyluronium t
  • step (b) is carried out by orthogonal protection strategy, and the amino protecting group on the side chain of the ring-forming amino acid is allyloxycarbonyl (Alloc).
  • the carboxy protecting group is an allyl group (OAll).
  • step (b) comprises deamination protection, and the removal of Alloc and OAll requires the addition of a degreasing agent, which is tetrakis(triphenylphosphine)palladium (Pd(PPh) 3 ) 4 ).
  • step (b) further requires the addition of a scavenger selected from the group consisting of H 3 N ⁇ BH 3 , Me 2 NH ⁇ BH 3 or PhSiH 3 , preferably PhSiH 3 .
  • a coupling reagent consisting of a carbodiimide type reagent or a tertiary amine type and a benzotriene a razoloxyl salt type reagent or a pyridine triazolium salt type; preferably diisopropylcarbodiimide (DIC) and 1-hydroxybenzotriazole (HOBt), or 2-(1H-benzotriazo) L-1-yl)-1,1,3,3-tetramethyluronium tetrafluoroborate (TBTU) and 1-hydroxybenzotriazole (HOBt) or N,N-diisopropylethylamine ( DIEA) and 2-(7-azobenzotriazole)-N,N,N',N'-tetramethyluronium hexafluorophosphate (HATU); further preferably N,N-diis
  • step (1) further comprises: (c) linking the resin peptide obtained in the step (b) to a fatty acid chain or a polybasic fatty acid chain.
  • step (c) is carried out in the presence of a coupling agent in a DMF solvent, the coupling agent being diisopropylcarbodiimide (DIC) and 1-hydroxyl Benzotriazole (HOBt).
  • DIC diisopropylcarbodiimide
  • HOBt 1-hydroxyl Benzotriazole
  • bacterium or fungus is Acinetobacter baumanii, drug resistant Acinetobacter baumanii, Pseudomonas aeruginosa, Drug resistant Pseudomonas aeruginosa, Bacillus subtilis, Staphylococcus aureus, E. coli, and/or candida Albicans One or several.
  • amino acids are: Fmoc-Glu(OAll)-OH, Fmoc-Dab(Boc)-OH, Fmoc-D-Phe-OH, Fmoc-Leu-OH, Fmoc-D-Leu-OH, Fmoc-Lys(Alloc)- OH, Fmoc-Thr(tBu)-OH
  • Synthetic reagents HOBt, DIC, DMF, DCM, piperidine, tetrakis(triphenylphosphine)palladium, phenylsilane, sodium diethyldithiocarbamate.
  • PSI300 peptide synthesis instrument Waters600 semi-preparative high performance liquid chromatography, centrifuge.
  • the resin was dried under vacuum and weighed.
  • the peptide was precipitated by adding 10 volumes of ice diethyl ether to the lysate, centrifuged, and the supernatant was discarded, and the precipitate was repeatedly washed with ice diethyl ether for 4 to 5 times, dried in vacuo, and the crude peptide was weighed.
  • the crude peptide was purified by semi-preparative RP-HPLC.
  • the target component with a purity greater than 95% was collected, steamed under low pressure, and lyophilized.
  • amino acids are: Fmoc-Glu(OAll)-OH, Fmoc-Dab(Boc)-OH, Fmoc-D-Phe-OH, Fmoc-Leu-OH, Fmoc-D-Leu-OH, Fmoc-Lys(Alloc)- OH, Fmoc-Thr(tBu)-OH
  • Synthetic reagents HOBt, DIC, DMF, DCM, piperidine, tetrakis(triphenylphosphine)palladium, phenylsilane, sodium diethyldithiocarbamate, n-octanoic acid.
  • PSI300 peptide synthesis instrument Waters600 semi-preparative high performance liquid chromatography, centrifuge.
  • the resin was dried under vacuum and weighed.
  • the peptide was precipitated by adding 10 volumes of ice diethyl ether to the lysate, centrifuged, and the supernatant was discarded, and the precipitate was repeatedly washed with ice diethyl ether for 4 to 5 times, dried in vacuo, and the crude peptide was weighed.
  • the crude peptide was purified by semi-preparative RP-HPLC.
  • the target component with a purity greater than 95% was collected, steamed under low pressure, and lyophilized.
  • Molecular weight confirmation by ESI-MS, m/z 606.25 (M+2H) 2+ is consistent with the theoretical molecular weight of 1210.34.
  • amino acids are: Fmoc-Glu(OAll)-OH, Fmoc-Asp(OAll)-OH, Fmoc-Dab(Boc)-OH, Fmoc-Leu-OH, Fmoc-D-Leu-OH, Fmoc-D-Phe- OH, Fmoc-Lys(Alloc)-OH, Fmoc-Thr(tBu)-OH, Fmoc-Phe-OH, Fmoc-Orn(Boc)-OH, Fmoc-Arg(Pbf)-OH, Fmoc-Phe(4- CF 3 )-OH, Fmoc-Phe(4-Br)-OH, Fmoc-Phe(4-I)-OH, Fmoc-Ala-OH, Fmoc-D-Ala-OH, Fmoc-AEEA-OH,
  • Reagents HOBt, DIC, DMF, piperidine, n-octanoic acid, citric acid, lauric acid, palmitic acid, t-butyl monodecanoate.
  • PSI300 peptide synthesizer Waters600 semi-preparative high performance liquid chromatography, Q-Tof MicroYA019 mass spectrometer, magnetic stirrer.
  • the polypeptide in Table 7 was prepared and purified in a manner similar to the procedure of ac in Example 1, and if it was a fatty chain polypeptide, it was prepared according to the procedure ac in Example 2, and the fraction having a purity greater than 95% was collected, and steamed, Freeze-dried.
  • the measured values of ESI-MS are shown in Table 7.
  • the minimum inhibitory concentration (MIC) of each antimicrobial peptide was determined according to the micro-broth dilution method recommended by the American Committee for Clinical Laboratory Standards (NCCLS).
  • the bacterial culture medium was Mueller-Hinton (MH) broth medium, Candida albicans medium.
  • Hyclone modified RPMI-1640 medium was used.
  • the above antimicrobial peptide at a concentration of 320 ⁇ g/ml and 80 ⁇ g/ml positive control amphotericin B, polymyxin E sulfate and vancomycin hydrochloride were precisely prepared.
  • the prepared stock solutions were stored in an environment of -20 ° C for use.
  • the inoculating loop uses the inoculating loop to pick 3 to 5 colonies of similar morphology to be inoculated, inoculate them in 4 to 5 ml of MH broth, and incubate at 35 ° C for 12 to 16 h.
  • the bacterial liquid was corrected to a MH turbidity standard with MH broth, and contained about 1 to 2 ⁇ 10 8 CFU/ml.
  • the above bacterial suspension was diluted 1:1000 with MH broth and set aside.
  • the drug concentrations in the first 1-10 well were 32 ⁇ g/ml, 16 ⁇ g/ml, 8 ⁇ g/ml, 4 ⁇ g/ml, 2 ⁇ g/ml, 1 ⁇ g/ml, 0.5 ⁇ g/ml, 0.25 ⁇ g/ml, 0.125 ⁇ g/ml, and 0.0625 ⁇ g, respectively.
  • the 11th hole is a blank control without antibacterial drugs and inoculum
  • the 12th hole is a negative control without antibacterial drugs.
  • the 96-well plates inoculated with bacteria were incubated in a normal air incubator at 35 ° C for 16-20 h, and the 96-well plates inoculated with fungi were incubated in a 28 ° C air incubator for 40-50 h.
  • the lowest drug concentration without bacterial growth was observed by the naked eye as the minimum inhibitory concentration (MIC) of the sample.
  • MIC minimum inhibitory concentration
  • LD50 Median Lethal Dose refers to the exposure dose of harmful substances or radiation that can kill half of the test subjects. It is a common parameter for describing the toxicity of harmful substances or radiation. LD50 is usually characterized by the ratio of the mass of the hazardous substance to the weight of the test organism and can be used to compare the relative toxicity of different substances.
  • mice male, weighing 20-22 g, were from Shanghai Xipuer-Beikai Experimental Animal Co., Ltd. The mice were housed in an animal laboratory at 20 ⁇ 2 ° C for 12 hours, and the experimental animals were given free access to water and food. Randomly grouped by weight.
  • intravenous administration was carried out at a dose of 10 ml/kg.
  • mice were used for pre-experiment, and the lethal dose range of 0% and 100% mortality of the test substance was measured, and then the formal test was conducted.
  • the number of formal test groups was 5 dose groups, and the number of animals in each group was 10.
  • One mouse was administered, and the test sample was administered intravenously at 5 mg/kg (administered volume 0.2 ml). The injection is completed in about 20s. If the animal does not die, another mouse is taken and a higher dose is given. If the animal dies or is in a state of sudden death, take another one and give a lower dose. The dose of animal survival was supplemented to 3, and the survival state of the animals was observed. Find 0% and 100% death doses.
  • the inter-group dose ratio was set, and the number of groups was 5, and the number of animals in each group was 10.
  • the immediate response of the animals after administration was observed and recorded. Body weight changes were monitored and the status of the animals after administration was recorded. If an animal dies, it should be recorded, and the experiment is terminated 7 days after administration, and all animals are sacrificed. Based on the experimental results, the LD50 was determined.
  • compositions and methods of the present invention have been described in accordance with the preferred embodiments, those skilled in the art may, without departing from the concept, the spirit and the scope of the present invention, The compositions and/or methods described herein, as well as the order of the steps or steps of the methods, are varied.

Abstract

The present invention belongs to the field of medicines, and relates to a polymyxin analogue having high antibacterial activity, and a preparation method therefor and an application thereof. The polymyxin analogue has a broad-spectrum and high-efficiency bactericidal effect on drug-resistant bacteria and fungi.

Description

多黏菌素类似物及其制备方法Polymyxin analog and preparation method thereof 技术领域Technical field
本发明属于医药领域,涉及到抗菌肽及其制备方法与应用,具体而言涉及到一组具有较高抗菌活性的多黏菌素类似物及其合成制备与应用。The invention belongs to the field of medicine, relates to an antibacterial peptide and a preparation method and application thereof, and particularly relates to a group of polymyxin analogs having high antibacterial activity and a synthetic preparation and application thereof.
背景技术Background technique
随着抗生素使用愈加频繁,细菌的耐药性问题也日益凸显,细菌的耐药性正日益成为威胁人类健康的重大问题,尤其是对已有的几乎所有抗生素都存在耐药性的多重耐药菌的出现使这一问题更加突出。然而,现今对新型的能够杀灭多重耐药菌的抗生素的研发仍然没有重大突破。目前抗菌能力最强的多黏菌素被视为抵抗耐药菌的“最后一道防线”,这也使得以多黏菌素作为抗菌剂的治疗方法成为必须。With the increasing use of antibiotics, the problem of bacterial resistance has become increasingly prominent. Bacterial resistance is becoming a major problem that threatens human health, especially multi-drug resistance to almost all existing antibiotics. The emergence of bacteria has made this problem even more prominent. However, there is still no major breakthrough in the development of new antibiotics capable of killing multi-drug resistant bacteria. At present, polymyxin, which has the strongest antibacterial ability, is regarded as the "last line of defense" against resistant bacteria, which makes it necessary to use polymyxin as an antibacterial agent.
多黏菌素是1947年发现的一类由多黏芽孢杆菌产生的环肽类抗生素,有多种组分组成,包括多黏菌素A、多黏菌素B、多黏菌素C、多黏菌素D、多黏菌素E,通常它们的抗菌谱窄且仅能对抗革兰氏阴性菌。临床上常用于治疗由革兰氏阴性菌引起的感染。然而由于其存在严重的肾毒性和神经毒性,其逐渐被一些毒副作用低、抗菌效果好的其他抗生素(氨基糖苷类等)取代。直到近20年由于多重耐药菌的出现,多黏菌素作为临床治疗药物再次进入人们的视野。目前已上市的多黏菌素类产品主要是硫酸多黏菌素B、硫酸多黏菌素E和多黏菌素E甲磺酸钠。多黏菌素B和多黏菌素E的抗菌活性稍有不同,一般情况下多黏菌素B的作用强度强于多黏菌素E(陈冠容,多黏菌素临床应用进展及应对超级细菌[J].医药导报,2011,30(2):135-140)。Polymyxin is a class of cyclic peptide antibiotics produced by Bacillus polymyxa discovered in 1947. It consists of various components, including polymyxin A, polymyxin B, polymyxin C, and more. Colistin D, polymyxin E, usually have a narrow antibacterial spectrum and are only resistant to Gram-negative bacteria. It is commonly used clinically to treat infections caused by Gram-negative bacteria. However, due to its severe nephrotoxicity and neurotoxicity, it is gradually replaced by other antibiotics (aminoglycosides, etc.) with low toxicity and good antibacterial effect. Until the emergence of multi-drug resistant bacteria in the past 20 years, polymyxin has once again entered the field of vision as a clinical therapeutic drug. The polymyxin products currently on the market are mainly polymyxin B sulfate, polymyxin E sulfate and sodium polymyxin E methanesulfonate. The antibacterial activity of polymyxin B and polymyxin E is slightly different. In general, the activity of polymyxin B is stronger than that of polymyxin E (Chen Guanrong, the clinical application of polymyxin and the response to super bacteria [J]. Medical Herald, 2011, 30 (2): 135-140).
天然多黏菌素一般由脂肪酰基链和环状七肽通过线性三肽链接构成,其中4位氨基酸L-Dab(α,γ-二氨基丁酸)与10位氨基酸L-Thr缩合形成七肽环。多黏菌素B和多黏菌素E的结构十分相似,仅在6位氨基酸上存在差异。其中,多黏菌素B的6位氨基酸是D-Phe,多黏菌素E的6位氨基酸是D-Leu(Cui,et.al.Research Development of Polymyxins[J].World Notes on Antibiotics,2015,36(5):205-210)。Natural polymyxin is generally composed of a fatty acyl chain and a cyclic heptapeptide linked by a linear tripeptide, wherein the 4-position amino acid L-Dab (α, γ-diaminobutyric acid) is condensed with the 10-position amino acid L-Thr to form a heptapeptide. ring. The structures of polymyxin B and polymyxin E are very similar, with only differences in the 6 amino acids. Among them, the 6-position amino acid of polymyxin B is D-Phe, and the 6-position amino acid of polymyxin E is D-Leu (Cui, et.al. Research Development of Polymyxins [J]. World Notes on Antibiotics, 2015 , 36(5): 205-210).
然而,多黏菌素肾毒性及神经毒性问题仍然是人们关注的重点。因此,寻找毒性低且具有高效杀菌活性的多黏菌素类似物成为一种迫切的需要。However, polymyxin nephrotoxicity and neurotoxicity remain a major concern. Therefore, the search for polymyxin analogs with low toxicity and high bactericidal activity has become an urgent need.
发明内容Summary of the invention
本发明专利申请涉及多肽及其制备合成方法与应用,具体而言涉及到一组具有较高抗菌活性的多黏菌素类似物及其合成制备与应用。The invention relates to a polypeptide and a preparation method and application thereof, in particular to a group of polymyxin analogs having high antibacterial activity, and synthetic preparation and application thereof.
在一个方面,本申请涉及多肽及其药用盐,所述多肽与式I所示的序列具有至少70%的 序列同一性。在一些方案中,所述多肽具有如下序列通式:R1-Xaa1-Xaa2-Xaa3-Xaa4-Xaa5-Xaa6-Xaa7-Xaa8-Xaa9-Xaa10-Xaa11-Xaa12(式I),其中,R1为:脂肪族直链或支链C 6-C 20的酰基基团或缺失;Xaa1为:Leu,Ala,AEEAc,Phe,IPhe,BrPhe,或3FPhe,或缺失;Xaa2为:Leu,Ala,Arg,或AEEAc,或缺失;Xaa3为:Dab,Ala,Leu,或Orn,或缺失;Xaa4为:Thr,Ala,Dab,或Lys;Xaa5为:Dab,Lys,Orn,或Ala,或缺失;Xaa6为:Lys,Glu,或Dab;Xaa7为:Dab,Ala,Lys,或Orn,或缺失;Xaa8为:D-Leu,D-Phe,Lys,或D-Ala;Xaa9为:Leu,或Ala;Xaa10为:Dab,Leu,Orn,Ala,或D-Leu,或缺失;Xaa11为:Dab,Leu,Orn,Ala,或D-Leu,或缺失;Xaa12为:Glu,Lys,或Asp。 In one aspect, the application relates to polypeptides and pharmaceutically acceptable salts thereof, which polypeptides have at least 70% sequence identity to the sequences of Formula I. In some embodiments, the polypeptide has the following sequence: R1-Xaa1-Xaa2-Xaa3-Xaa4-Xaa5-Xaa6-Xaa7-Xaa8-Xaa9-Xaa10-Xaa11-Xaa12 (Formula I), wherein R1 is: Fat a straight or branched C 6 -C 20 acyl group or deletion; Xaa1 is: Leu, Ala, AEEAc, Phe, IPhe, BrPhe, or 3FPhe, or a deletion; Xaa2 is: Leu, Ala, Arg, or AEEAc , or deletion; Xaa3 is: Dab, Ala, Leu, or Orn, or deletion; Xaa4 is: Thr, Ala, Dab, or Lys; Xaa5 is: Dab, Lys, Orn, or Ala, or deletion; Xaa6 is: Lys , Glu, or Dab; Xaa7 is: Dab, Ala, Lys, or Orn, or a deletion; Xaa8 is: D-Leu, D-Phe, Lys, or D-Ala; Xaa9 is: Leu, or Ala; Xaa10 is: Dab, Leu, Orn, Ala, or D-Leu, or a deletion; Xaa11 is: Dab, Leu, Orn, Ala, or D-Leu, or a deletion; Xaa12 is: Glu, Lys, or Asp.
在一些方案中,所述多肽为环肽。在某些方案中,所述多肽由Xaa6与Xaa12的侧链基团脱水缩合成酰胺键而成环,可选地,所述侧链基团包含氨基和/或羧基。可选地,所述多肽由氨基与羧基脱水缩合成酰胺键而成环。In some aspects, the polypeptide is a cyclic peptide. In certain embodiments, the polypeptide is formed by the condensation of Xaa6 with a side chain group of Xaa12 to form an amide linkage, and optionally, the pendant group comprises an amino group and/or a carboxyl group. Alternatively, the polypeptide is obtained by dehydration of an amino group with a carboxyl group to form an amide bond.
在一些实施方式中,所述R1选自庚酰基、甲基庚酰基、辛酰基、甲基辛酰基、壬酰基、甲基壬酰基、癸酰基、甲基癸酰基、月桂酰基、肉豆蔻酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,优选为正辛酰基、癸酰基、月桂酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,更优选为正辛酰基或缺失;Xaa1优选Leu或缺失,Xaa2优选Leu,Xaa3优选Dab,Xaa4优选Thr,Xaa5优选Dab,Xaa6优选Lys或Dab,Xaa7优选Dab,Xaa8优选D-Phe或D-Leu,Xaa9优选Leu,Xaa10优选Dab,Xaa11优选Dab,和/或Xaa12优选Glu。In some embodiments, the R 1 is selected from the group consisting of heptanoyl, methylheptanoyl, octanoyl, methyloctanoyl, decanoyl, methyl decanoyl, decanoyl, methyl decanoyl, lauroyl, myristoyl, Palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, preferably n-octanoyl, decanoyl, lauroyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, more preferably n-octanoyl or a deletion Xaa1 is preferably Leu or deleted, Xaa2 is preferably Leu, Xaa3 is preferably Dab, Xaa3 is preferably Dab, Xaa4 is preferably Thr, Xaa4 is preferably Dab, Xaa6 is preferably Dab, Xaa6 is preferably Lys or Dab, Xaa7 is preferably Dab, Xaa8 is preferably D-Phe or D-Leu, Xaa9 is preferably Leu, Xaa10 is preferably Dab Xaa11 is preferably Dab, and/or Xaa12 is preferably Glu.
在一些方案中,所述多肽具有如下通式:In some aspects, the polypeptide has the formula:
Figure PCTCN2018112889-appb-000001
Figure PCTCN2018112889-appb-000001
其中,R1为:脂肪族直链或支链C 6-C 20的酰基基团或缺失;Xaa1为:Leu,Ala,AEEAc,Phe,IPhe,BrPhe,3FPhe或缺失;Xaa2为:Leu,Ala,Arg,AEEAc或缺失;Xaa3为:Dab,Ala,Leu,Orn或缺失;Xaa4为:Thr,Ala,Dab或Lys;Xaa5为:Dab,Lys,Orn,Ala或缺失;Xaa6为:Lys或Dab;Xaa7为:Dab,Ala,Lys,Orn或缺失;Xaa8为:D-Leu,D-Phe,Lys或D-Ala;Xaa9为:Leu或Ala;Xaa10为:Dab,Leu,Orn,Ala,D-Leu或缺失;Xaa11为:Dab,Leu,Orn,Ala,D-Leu或缺失。在一些具体实施方式中,所述R1选自庚酰基、甲基庚酰基、辛酰基、甲基辛酰基、壬酰基、甲基壬酰基、癸酰基、甲基癸酰基、月桂酰基、肉豆蔻酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,优选为正辛酰基、癸酰基、月桂酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,更优选为正辛酰基或缺失;Xaa1优选Leu或缺失,Xaa2优选Leu,Xaa3优选Dab,Xaa4优选Thr,Xaa5优选Dab,Xaa6优选Lys或Dab,Xaa7优选Dab,Xaa8优选D-Phe或D-Leu,Xaa9优选Leu,Xaa10优选Dab,Xaa11优选Dab。 Wherein R1 is: an aliphatic straight-chain or branched C 6 -C 20 acyl group or a deletion; Xaa1 is: Leu, Ala, AEEAc, Phe, IPhe, BrPhe, 3FPhe or a deletion; Xaa2 is: Leu, Ala, Arg, AEEAc or deletion; Xaa3 is: Dab, Ala, Leu, Orn or deletion; Xaa4 is: Thr, Ala, Dab or Lys; Xaa5 is: Dab, Lys, Orn, Ala or deletion; Xaa6 is: Lys or Dab; Xaa7 is: Dab, Ala, Lys, Orn or deletion; Xaa8 is: D-Leu, D-Phe, Lys or D-Ala; Xaa9 is: Leu or Ala; Xaa10 is: Dab, Leu, Orn, Ala, D- Leu or deletion; Xaa11 is: Dab, Leu, Orn, Ala, D-Leu or deletion. In some embodiments, the R1 is selected from the group consisting of heptanoyl, methylheptanoyl, octanoyl, methyloctanoyl, decanoyl, methyldecanoyl, decanoyl, methyldecanoyl, lauroyl, myristoyl , palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, preferably n-octanoyl, decanoyl, lauroyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, more preferably n-octanoyl or Deletion; Xaa1 is preferably Leu or deleted, Xaa2 is preferably Leu, Xaa3 is preferably Dab, Xaa3 is preferably Dab, Xaa4 is preferably Thr, Xaa5 is preferably Dab, Xaa6 is preferably Lys or Dab, Xaa7 is preferably Dab, Xaa8 is preferably D-Phe or D-Leu, Xaa9 is preferably Leu, Xaa10 is preferred Dab, Xaa11 is preferably Dab.
在一些方案中,所述多肽具有如下通式:In some aspects, the polypeptide has the formula:
Figure PCTCN2018112889-appb-000002
Figure PCTCN2018112889-appb-000002
其中,R1为:脂肪族直链或支链C 6-C 20的酰基基团或缺失;Xaa1为:Leu,Ala,AEEAc,Phe,IPhe,BrPhe,3FPhe或缺失;Xaa2为:Leu,Ala,Arg,AEEAc或缺失;Xaa3为:Dab,Ala,Leu,Orn或缺失;Xaa4为:Thr,Ala,Dab,Lys;Xaa5为:Dab,Lys,Orn,Ala或缺失;Xaa7为:Dab,Ala,Lys,Orn或缺失;Xaa8为:D-Leu,D-Phe,Lys,D-Ala;Xaa9为:Leu,Ala;Xaa10为:Dab,Leu,Orn,Ala,D-Leu或缺失;Xaa11为:Dab,Leu,Orn,Ala,D-Leu或缺失;Xaa12为:Glu,Asp。在一些具体实施方案中,所述R1选自庚酰基、甲基庚酰基、辛酰基、甲基辛酰基、壬酰基、甲基壬酰基、癸酰基、甲基癸酰基、月桂酰基、肉豆蔻酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,优选为正辛酰基、癸酰基、月桂酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,更优选为正辛酰基或缺失;Xaa1优选Leu或缺失,Xaa2优选Leu,Xaa3优选Dab,Xaa4优选Thr,Xaa5优选Dab,Xaa7优选Dab,Xaa8优选D-Phe或D-Leu,Xaa9优选Leu,Xaa10优选Dab,Xaa11优选Dab,和/或Xaa12优选Glu。 Wherein R1 is: an aliphatic straight-chain or branched C 6 -C 20 acyl group or a deletion; Xaa1 is: Leu, Ala, AEEAc, Phe, IPhe, BrPhe, 3FPhe or a deletion; Xaa2 is: Leu, Ala, Arg, AEEAc or deletion; Xaa3 is: Dab, Ala, Leu, Orn or deletion; Xaa4 is: Thr, Ala, Dab, Lys; Xaa5 is: Dab, Lys, Orn, Ala or deletion; Xaa7 is: Dab, Ala, Lys, Orn or deletion; Xaa8 is: D-Leu, D-Phe, Lys, D-Ala; Xaa9 is: Leu, Ala; Xaa10 is: Dab, Leu, Orn, Ala, D-Leu or deletion; Xaa11 is: Dab, Leu, Orn, Ala, D-Leu or deletion; Xaa12 is: Glu, Asp. In some embodiments, the R1 is selected from the group consisting of heptanoyl, methylheptanoyl, octanoyl, methyloctanoyl, decanoyl, methyldecanoyl, decanoyl, methyldecanoyl, lauroyl, myristoyl , palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, preferably n-octanoyl, decanoyl, lauroyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, more preferably n-octanoyl or Xaa1 is preferably Leu or deleted, Xaa2 is preferably Leu, Xaa3 is preferably Dab, Xaa3 is preferably Dab, Xaa4 is preferably Thr, Xaa5 is preferably Dab, Xaa7 is preferably Dab, Xaa7 is preferably Dab, Xaa8 is preferably D-Phe or D-Leu, Xaa9 is preferably Leu, Xaa10 is preferably Dab, Xaa11 is preferably Dab, And/or Xaa12 is preferably Glu.
在一些方案中,所述多肽具有如下通式:In some aspects, the polypeptide has the formula:
Figure PCTCN2018112889-appb-000003
Figure PCTCN2018112889-appb-000003
其中,R1为:脂肪族直链或支链C 6-C 20的酰基基团或缺失;Xaa1为:Leu,Ala,AEEAc,Phe,IPhe,BrPhe,3FPhe或缺失;Xaa2为:Leu,Ala,Arg,AEEAc或缺失;Xaa3为:Dab,Ala,Leu,Orn或缺失;Xaa4为:Thr,Ala,Dab或Lys;Xaa5为:Dab,Lys,Orn,Ala或缺失;Xaa7为:Dab,Ala,Lys,Orn或缺失;Xaa8为:D-Leu,D-Phe,Lys或D-Ala;Xaa9为:Leu或Ala;Xaa10为:Dab,Leu,Orn,Ala,D-Leu或缺失;Xaa11为:Dab,Leu,Orn,Ala,D-Leu或缺失。在一些具体实施方式中,所述R1选自庚酰基、甲基庚酰基、辛酰基、甲基辛酰基、壬酰基、甲基壬酰基、癸酰基、甲基癸酰基、月桂酰基、肉豆蔻酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,优选为正辛酰基、癸酰基、月桂酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,更优选为正辛酰基或缺失;Xaa1优选Leu或缺失,Xaa2优选Leu,Xaa3优选Dab,Xaa4优选Thr,Xaa5优选Dab,Xaa7优选Dab,Xaa8优选D-Phe或D-Leu,Xaa9优选Leu,Xaa10优选Dab,Xaa11优选Dab。 Wherein R1 is: an aliphatic straight-chain or branched C 6 -C 20 acyl group or a deletion; Xaa1 is: Leu, Ala, AEEAc, Phe, IPhe, BrPhe, 3FPhe or a deletion; Xaa2 is: Leu, Ala, Arg, AEEAc or deletion; Xaa3 is: Dab, Ala, Leu, Orn or deletion; Xaa4 is: Thr, Ala, Dab or Lys; Xaa5 is: Dab, Lys, Orn, Ala or deletion; Xaa7 is: Dab, Ala, Lys, Orn or deletion; Xaa8 is: D-Leu, D-Phe, Lys or D-Ala; Xaa9 is: Leu or Ala; Xaa10 is: Dab, Leu, Orn, Ala, D-Leu or deletion; Xaa11 is: Dab, Leu, Orn, Ala, D-Leu or missing. In some embodiments, the R1 is selected from the group consisting of heptanoyl, methylheptanoyl, octanoyl, methyloctanoyl, decanoyl, methyldecanoyl, decanoyl, methyldecanoyl, lauroyl, myristoyl , palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, preferably n-octanoyl, decanoyl, lauroyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, more preferably n-octanoyl or Deletion; Xaa1 is preferably Leu or deleted, Xaa2 is preferably Leu, Xaa3 is preferably Dab, Xaa4 is preferably Dab, Xaa4 is preferably Thr, Xaa5 is preferably Dab, Xaa7 is preferably Dab, Xaa8 is preferably D-Phe or D-Leu, Xaa9 is preferably Leu, Xaa10 is preferably Dab, and Xaa11 is preferably Dab.
在一个实施方式中,多肽是由R1-Leu-Dab-Thr-Dab-Xaa6-Dab-Xaa8-Leu-Dab-Dab-Glu所示的序列组成的肽或环肽,其中R1优选为正辛酰基、癸酰基、月桂酰基、棕榈酰基、17-羧基十七烷酰基或缺失,更优选为正辛酰基或缺失;Xaa6优选Lys或Dab,Xaa8优选D-Phe或D-Leu。在另一个实施方式中,所述多肽是由R1-Dab-Thr-Dab-Xaa6-Dab-Xaa8-Leu-Dab-Dab-Glu所示的序列组成的肽或环肽,其中R1优选 为正辛酰基、癸酰基、月桂酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,更优选为正辛酰基或缺失;Xaa6优选Lys或Dab,Xaa8优选D-Phe或D-Leu。In one embodiment, the polypeptide is a peptide or cyclic peptide consisting of the sequence represented by R1-Leu-Dab-Thr-Dab-Xaa6-Dab-Xaa8-Leu-Dab-Dab-Glu, wherein R1 is preferably n-octanoyl , decanoyl, lauroyl, palmitoyl, 17-carboxyheptadecanoyl or a deletion, more preferably n-octanoyl or a deletion; Xaa6 is preferably Lys or Dab, and Xaa8 is preferably D-Phe or D-Leu. In another embodiment, the polypeptide is a peptide or cyclic peptide consisting of the sequence represented by R1-Dab-Thr-Dab-Xaa6-Dab-Xaa8-Leu-Dab-Dab-Glu, wherein R1 is preferably n-octane Acyl, decanoyl, lauroyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, more preferably n-octanoyl or a deletion; Xaa6 is preferably Lys or Dab, and Xaa8 is preferably D-Phe or D-Leu.
在一些具体的实施方式中,所述多肽是包含序列H 2N-Leu-Dab-Thr-Dab-Lys-Dab-D-Phe-Leu-Dab-Dab-Glu,或者序列H 2N-Dab-Thr-Dab-Lys-Dab-D-Phe-Leu-Dab-Dab-Glu的肽或环肽。 In some specific embodiments, the polypeptide comprises the sequence H 2 N-Leu-Dab-Thr-Dab-Lys-Dab-D-Phe-Leu-Dab-Dab-Glu, or the sequence H 2 N-Dab- A peptide or cyclic peptide of Thr-Dab-Lys-Dab-D-Phe-Leu-Dab-Dab-Glu.
在一些实施方式中,本发明的多肽包含与上述多肽具有至少60%,65%,70%,75%,80%,85%,90%,91%,92%,93%,94%,95%,96%,97%,98%,99%序列同一性的氨基酸序列。在另一些实施方式中,本发明的多肽与上述多肽相比,具有至少1个、2个、3个、4个、5个、6个氨基酸的添加、替换和/或缺失的氨基酸序列。在另一些实施方式中,本发明的多肽与上述多肽相比,具有至少1个、2个、3个、4个、5个、6个氨基酸的替换,其中所述取代可以是保守的替换,和/或近似的替换。在另一些实施方式中,本发明的多肽是上述多肽的6个、7个、8个、9个、10个、11个氨基酸长度的连续的氨基酸的截短体。In some embodiments, the polypeptide of the invention comprises at least 60%, 65%, 70%, 75%, 80%, 85%, 90%, 91%, 92%, 93%, 94%, 95 with the above polypeptide. %, 96%, 97%, 98%, 99% sequence identity amino acid sequence. In other embodiments, the polypeptide of the invention has an amino acid sequence of at least 1, 2, 3, 4, 5, 6 amino acid additions, substitutions, and/or deletions as compared to the polypeptide described above. In other embodiments, the polypeptide of the invention has at least 1, 2, 3, 4, 5, 6 amino acid substitutions compared to the above polypeptide, wherein the substitution can be a conservative substitution, And/or approximate replacement. In other embodiments, the polypeptide of the invention is a truncated amino acid of six, seven, eight, nine, ten, eleven amino acid lengths of the above polypeptide.
在一些方案中,本申请提供的多肽是一种低毒性的多肽。In some aspects, the polypeptides provided herein are a low toxicity polypeptide.
在一个方面,本申请还提供了前述的多肽或其药用盐的用途。本发明所涉及的多肽可以用于抑菌、抗菌或制备抗菌物质。In one aspect, the application also provides the use of the aforementioned polypeptide or a pharmaceutically acceptable salt thereof. The polypeptides of the present invention can be used for bacteriostatic, antibacterial or antibacterial substances.
在一些实例中,所述抗菌物质为抗菌药物或抗菌剂。在一些实例中,所述菌为细菌或真菌。特别令人吃惊的是,本发明的多肽可以用于抗阴性菌或抗耐药菌,或制备抗阴性菌或抗耐药菌药物。在一些实例中,所述细菌、真菌或耐药菌是鲍曼不动杆菌(Acinetobacter baumanii),耐药鲍曼不动杆菌(drug resistant Acinetobacter baumanii),铜绿假单胞菌(Pseudomonas aeruginosa),耐药铜绿假单胞菌,枯草芽孢杆菌(Bacillus subtilis),金黄色葡萄球菌(Staphylococcus aureus),大肠杆菌(E.coli),和/或白色念珠菌(candida Albicans)中的一种或几种,更优选地,是铜绿假单胞菌,耐药鲍曼不动杆菌、耐药铜绿假单胞菌。In some examples, the antimicrobial substance is an antimicrobial or antimicrobial agent. In some examples, the bacterium is a bacterium or a fungus. It is particularly surprising that the polypeptides of the invention can be used against anti-negative or anti-resistant bacteria, or for the preparation of anti-negative or anti-resistant bacteria. In some examples, the bacterium, fungus or drug resistant bacterium is Acinetobacter baumanii, drug resistant Acinetobacter baumanii, Pseudomonas aeruginosa, resistant One or more of Pseudomonas aeruginosa, Bacillus subtilis, Staphylococcus aureus, E. coli, and/or candida Albicans, More preferably, it is Pseudomonas aeruginosa, a drug-resistant Acinetobacter baumannii, and a drug-resistant Pseudomonas aeruginosa.
在另一个方面,本发明涉及抗菌物质。在一些具体实施方式中,所述抗菌物质为抗菌药物或抗菌剂。本发明的抗菌物质或菌剂包括本发明所述的多肽,以及药学上可接受的盐和/或载体、赋形剂中的一种或几种。In another aspect, the invention relates to an antimicrobial substance. In some embodiments, the antimicrobial substance is an antimicrobial or antimicrobial agent. The antibacterial substance or the microbial agent of the present invention includes the polypeptide of the present invention, and one or more of a pharmaceutically acceptable salt and/or a carrier and an excipient.
在另一个方面,本申请涉及药物组合物,其包含本申请的多肽或其药学上可接受的盐。在一些实施方案中,本申请的药物组合物还包括药学上可接受的赋形剂、稀释剂或载体。In another aspect, the present application is directed to a pharmaceutical composition comprising a polypeptide of the present application, or a pharmaceutically acceptable salt thereof. In some embodiments, the pharmaceutical compositions of the present application further comprise a pharmaceutically acceptable excipient, diluent or carrier.
在另一个方面,本申请涉及所述多肽或其药学上可接受的盐在制备预防或者治疗感染性疾病的药物和/或药物组合物中的用途。In another aspect, the present application relates to the use of the polypeptide or a pharmaceutically acceptable salt thereof for the manufacture of a medicament and/or a pharmaceutical composition for preventing or treating an infectious disease.
在另一个方面,本申请涉及治疗哺乳动物的疾病的方法,包括对需要该治疗的哺乳动物,优选人类,给予治疗有效量的本发明的多肽或其药学上可接受的盐、或其药物组合物。In another aspect, the present application relates to a method of treating a disease in a mammal comprising administering to a mammal in need of such treatment, preferably a human, a therapeutically effective amount of a polypeptide of the invention, or a pharmaceutically acceptable salt thereof, or a pharmaceutical combination thereof Things.
上述组合疗法可以如下方式给予:(a)单一药物组合物,其包含本申请的多肽、至少一种本文中描述的附加的治疗剂、和药学上可接受的赋形剂、稀释剂或载体;或(b)两种单独的药物组合物,其包括(i)包含本申请的多肽及药学上可接受的赋形剂、稀释剂或载体的第一组合物,及(ii)包含至少一种附加的治疗剂和药学上可接受的赋形剂、稀释剂、或载体的第二组合物。所述药物组合物可以同时或相继和以任何顺序给予。The above combination therapies can be administered in the following manner: (a) a single pharmaceutical composition comprising a polypeptide of the present application, at least one additional therapeutic agent described herein, and a pharmaceutically acceptable excipient, diluent or carrier; Or (b) two separate pharmaceutical compositions comprising (i) a first composition comprising a polypeptide of the present application and a pharmaceutically acceptable excipient, diluent or carrier, and (ii) comprising at least one An additional therapeutic agent and a second composition of a pharmaceutically acceptable excipient, diluent, or carrier. The pharmaceutical compositions can be administered simultaneously or sequentially and in any order.
在一个方面,本发明涉及到一组多肽或其药用盐,所述多肽氨基酸序列如下:In one aspect, the invention relates to a set of polypeptides or pharmaceutically acceptable salts thereof, the amino acid sequences of which are as follows:
R1-Xaa1-Xaa2-Xaa3-Xaa4-Xaa5-Xaa6-Xaa7-Xaa8-Xaa9-Xaa10-Xaa11-Xaa12(式I)。R1-Xaa1-Xaa2-Xaa3-Xaa4-Xaa5-Xaa6-Xaa7-Xaa8-Xaa9-Xaa10-Xaa11-Xaa12 (Formula I).
在一些方案中,所述多肽是氨基酸序列如下所示的环肽:In some embodiments, the polypeptide is a cyclic peptide having the amino acid sequence shown below:
Figure PCTCN2018112889-appb-000004
Figure PCTCN2018112889-appb-000004
其中R1为:脂肪族直链或支链C 6-C 20的酰基基团或缺失; Wherein R1 is: an aliphatic straight or branched C 6 -C 20 acyl group or a deletion;
Xaa1为:Leu,Ala,AEEAc,Phe,IPhe,BrPhe,3FPhe或缺失;Xaa1 is: Leu, Ala, AEEAc, Phe, IPhe, BrPhe, 3FPhe or deletion;
Xaa2为:Leu,Ala,Arg,AEEAc或缺失;Xaa2 is: Leu, Ala, Arg, AEEAc or deletion;
Xaa3为:Dab,Ala,Leu,Orn或缺失;Xaa3 is: Dab, Ala, Leu, Orn or missing;
Xaa4为:Thr,Ala,Dab,Lys;Xaa4 is: Thr, Ala, Dab, Lys;
Xaa5为:Dab,Lys,Orn,Ala或缺失;Xaa5 is: Dab, Lys, Orn, Ala or missing;
Xaa6为:Lys,Glu,Dab;Xaa6 is: Lys, Glu, Dab;
Xaa7为:Dab,Ala,Lys,Orn或缺失;Xaa7 is: Dab, Ala, Lys, Orn or missing;
Xaa8为:D-leu,D-Phe,Lys,D-Ala;Xaa8 is: D-leu, D-Phe, Lys, D-Ala;
Xaa9为:Leu,Ala;Xaa9 is: Leu, Ala;
Xaa10为:Dab,Leu,Orn,Ala,D-Leu或缺失;Xaa10 is: Dab, Leu, Orn, Ala, D-Leu or deletion;
Xaa11为:Dab,Leu,Orn,Ala,D-Leu或缺失;Xaa11 is: Dab, Leu, Orn, Ala, D-Leu or deletion;
Xaa12为:Glu,Lys,Asp;Xaa12 is: Glu, Lys, Asp;
作为本发明的一种优选方案,所述R1选自庚酰基、甲基庚酰基、辛酰基、甲基辛酰基、壬酰基、甲基壬酰基、癸酰基、甲基癸酰基、月桂酰基、肉豆蔻酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,Xaa1优选Leu或缺失,Xaa2优选Leu,Xaa3优选Dab,Xaa4优选Thr,Xaa5优选Dab,Xaa6优选Lys或Dab,Xaa7优选Dab,Xaa8优选D-Phe或D-Leu,Xaa9优选Leu,Xaa10优选Dab,Xaa11优选Dab,Xaa12优选Glu。As a preferred embodiment of the present invention, the R1 is selected from the group consisting of heptanoyl, methylheptanoyl, octanoyl, methyloctanoyl, decanoyl, methyldecanoyl, decanoyl, methyldecanoyl, lauroyl, meat Myristoyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, Xaa1 is preferably Leu or deleted, Xaa2 is preferably Leu, Xaa3 is preferably Dab, Xaa4 is preferably Thr, Xaa5 is preferably Dab, Xaa6 is preferably Lys or Dab, Xaa7 is preferably Dab, Xaa8 is preferably D-Phe or D-Leu, Xaa9 is preferably Leu, Xaa10 is preferably Dab, Xaa11 is preferably Dab, and Xaa12 is preferably Glu.
本发明所涉及的多肽的氨基酸残基包括天然氨基酸和非天然氨基酸,其中涉及的天然氨基酸所对应的三字母代码如表1所示,所涉及到的非天然氨基酸及其所对应的字母代码和结构如表2所示。The amino acid residues of the polypeptides involved in the present invention include natural amino acids and unnatural amino acids, wherein the three-letter codes corresponding to the natural amino acids involved are shown in Table 1, the unnatural amino acids involved and the corresponding letter codes and The structure is shown in Table 2.
本发明所涉及的氨基酸若不特别限定其结构,则默认为L型氨基酸。The amino acid according to the present invention is an L-form amino acid by default unless it is specifically limited.
在一些实施方式中,本发明所涉及到的多肽为环肽,是由Xaa6与Xaa12侧链的氨基(或羧基)与羧基(或氨基)脱水缩合成酰胺键而成环。In some embodiments, the polypeptide of the present invention is a cyclic peptide which is obtained by dehydration of an amino group (or a carboxyl group) of a Xaa6 and Xaa12 side chain with a carboxyl group (or an amino group) to form an amide bond.
在一些实施方式中,本发明所涉及到的肽其C末端既可以是羧基形式,也可以是酰胺形式,优选为酰胺形式。In some embodiments, the peptides of the present invention may have a C-terminus either in the form of a carboxyl group or in the form of an amide, preferably in the form of an amide.
表1:天然氨基酸三字母代码表Table 1: Natural amino acid three letter code table
Figure PCTCN2018112889-appb-000005
Figure PCTCN2018112889-appb-000005
表2:非天然氨基酸及脂肪酸代码与结构表Table 2: Unnatural amino acid and fatty acid code and structure table
Figure PCTCN2018112889-appb-000006
Figure PCTCN2018112889-appb-000006
Figure PCTCN2018112889-appb-000007
Figure PCTCN2018112889-appb-000007
本发明的一个优选实施方式中公开了一种环肽(ZAMP18),其氨基酸序列为:In a preferred embodiment of the invention, a cyclic peptide (ZAMP18) is disclosed, the amino acid sequence of which is:
Figure PCTCN2018112889-appb-000008
Figure PCTCN2018112889-appb-000008
本发明的又一个优选实施方式公开了一种带脂肪链的环肽(ZAMP29),其氨基酸序列为:A further preferred embodiment of the invention discloses a cyclic peptide with a fatty chain (ZAMP29) having an amino acid sequence of:
Figure PCTCN2018112889-appb-000009
Figure PCTCN2018112889-appb-000009
本发明另一个优选的实施方式中公开了一组环肽CTAMP-41,CTAMP-42,CTAMP-43,CTAMP-44,CTAMP-45,CTAMP-46,CTAMP-47,ZAMP-3,ZAMP-4,ZAMP-5,ZAMP-6,ZAMP-7,ZAMP-8,ZAMP-9,ZAMP-10,ZAMP-11,ZAMP-12,ZAMP-13,ZAMP-14,ZAMP-15,ZAMP-16,ZAMP-17,ZAMP-19,ZAMP-20,ZAMP-21,ZAMP-22,ZAMP-23,ZAMP-24,ZAMP-25,ZAMP-26,ZAMP-27,ZAMP-28,ZAMP-30,ZAMP-31,ZAMP-32,ZAMP-33,ZAMP-34,ZAMP-35,ZAMP-36,ZAMP-37,ZAMP-38,ZAMP-39,ZAMP-40其氨基酸序列分别为:In another preferred embodiment of the invention, a group of cyclic peptides CTAMP-41, CTAMP-42, CTAMP-43, CTAMP-44, CTAMP-45, CTAMP-46, CTAMP-47, ZAMP-3, ZAMP-4 are disclosed. , ZAMP-5, ZAMP-6, ZAMP-7, ZAMP-8, ZAMP-9, ZAMP-10, ZAMP-11, ZAMP-12, ZAMP-13, ZAMP-14, ZAMP-15, ZAMP-16, ZAMP -17, ZAMP-19, ZAMP-20, ZAMP-21, ZAMP-22, ZAMP-23, ZAMP-24, ZAMP-25, ZAMP-26, ZAMP-27, ZAMP-28, ZAMP-30, ZAMP-31 , ZAMP-32, ZAMP-33, ZAMP-34, ZAMP-35, ZAMP-36, ZAMP-37, ZAMP-38, ZAMP-39, ZAMP-40 have the amino acid sequences:
Figure PCTCN2018112889-appb-000010
Figure PCTCN2018112889-appb-000010
Figure PCTCN2018112889-appb-000011
Figure PCTCN2018112889-appb-000011
Figure PCTCN2018112889-appb-000012
Figure PCTCN2018112889-appb-000012
一方面,本发明的多肽可以是具有线性一级结构的肽,另一方面,本发明的多肽可以是环肽。在一些实施方式中,本发明的多肽包含与以上任意一序列所示的肽或环肽具有至少60%,65%,70%,75%,80%,85%,90%,91%,92%,93%,94%,95%,96%,97%,98%,99%序列同一性的氨基酸序列。在另一些实施方式中,本发明的多肽包含与以上任意一序列所示的多肽具有至少1个、2个、3个、4个、5个、6个氨基酸的添加、替换和/或缺失的氨基酸序列。在另一些实施方式中,本发明的多肽包含与以上任意一序列所示的多肽具有至少1个、2个、3个、4个、5个、6个氨基酸的替换,其中所述取代可以是保守的替换,和/或近似的替换。在另一些实施方式中,本发明的多肽是以上任意一序列所示的多肽的6个、7个、8个、9个、10个、11个氨基酸长度的连续的截短体。In one aspect, the polypeptide of the invention may be a peptide having a linear primary structure, and in another aspect, the polypeptide of the invention may be a cyclic peptide. In some embodiments, the polypeptide of the invention comprises at least 60%, 65%, 70%, 75%, 80%, 85%, 90%, 91%, 92 of the peptide or cyclic peptide shown in any of the above sequences. %, 93%, 94%, 95%, 96%, 97%, 98%, 99% sequence identity amino acid sequence. In other embodiments, the polypeptide of the invention comprises a addition, substitution and/or deletion of at least 1, 2, 3, 4, 5, 6 amino acids with a polypeptide as set forth in any of the above sequences. Amino acid sequence. In other embodiments, the polypeptide of the invention comprises a substitution of at least 1, 2, 3, 4, 5, 6 amino acids with a polypeptide as set forth in any of the above sequences, wherein the substitution may be Conservative substitutions, and/or approximate replacements. In other embodiments, the polypeptide of the invention is a continuous truncation of six, seven, eight, nine, ten, eleven amino acid lengths of the polypeptide shown in any of the above sequences.
在另一个方面,本发明还提供了一种上述肽或环肽的制备方法。In another aspect, the invention also provides a process for the preparation of the above peptide or cyclic peptide.
在一些方案中,所述方法包括:合成所述多肽。In some aspects, the method comprises: synthesizing the polypeptide.
在一些方案中,可采用固相合成技术制备以上多肽,包括:In some aspects, the above polypeptides can be prepared using solid phase synthesis techniques, including:
(1)在树脂上固相合成多肽;(1) solid phase synthesis of a polypeptide on a resin;
(2)将步骤(1)的产物用强酸进行裂解;加入侧链保护基清除剂,过滤,用5-20倍体积的有机溶剂沉淀多肽,离心,有机溶剂反复洗涤沉淀,干燥,得到粗肽。(2) The product of the step (1) is cleaved with a strong acid; a side chain protecting group scavenger is added, filtered, and the polypeptide is precipitated with 5-20 volumes of an organic solvent, centrifuged, and the organic solvent is repeatedly washed and precipitated, and dried to obtain a crude peptide. .
任选地,所述步骤(1)包括如下步骤:Optionally, the step (1) comprises the following steps:
(a)浸泡树脂—脱除氨基保护基—洗涤—监测—偶联氨基酸—监测—洗涤—脱除氨基保护基—顺序偶联剩余氨基酸;(a) soaking resin - removal of amino protecting group - washing - monitoring - coupling of amino acids - monitoring - washing - removal of amino protecting groups - sequential coupling of residual amino acids;
(b)树脂肽进一步环化。(b) The resin peptide is further cyclized.
其中,氨基保护基是指为保护参与缩合反应的氨基而引入的化学基团。所述的氨基保护基包括但不限于叔丁氧羰基(Boc)、苄氧羰基(Z)或9-芴基-甲氧羰基(Fmoc),优选9-芴基-甲氧羰基(Fmoc)。Wherein, the amino protecting group refers to a chemical group introduced to protect the amino group involved in the condensation reaction. The amino protecting group includes, but is not limited to, t-butoxycarbonyl (Boc), benzyloxycarbonyl (Z) or 9-fluorenyl-methoxycarbonyl (Fmoc), preferably 9-fluorenyl-methoxycarbonyl (Fmoc).
固相多肽合成中,对部分氨基酸的侧链可以引入化学基团进行保护,例如Arg可以采用五甲基苯并呋喃-5-磺酰基(Pbf)保护;Dab,Orn可以采用叔丁氧羰基(Boc)保护;Thr可以采用叔丁基(tBu)保护。本发明中,Fmoc-L-Dab(Boc)-OH具有如下所示的结构:In solid phase peptide synthesis, the side chain of some amino acids can be protected by introducing chemical groups. For example, Arg can be protected with pentamethylbenzofuran-5-sulfonyl (Pbf); Dab, Orn can be tert-butoxycarbonyl ( Boc) protection; Thr can be protected with tert-butyl (tBu). In the present invention, Fmoc-L-Dab(Boc)-OH has the structure shown below:
Figure PCTCN2018112889-appb-000013
Figure PCTCN2018112889-appb-000013
所述保护基包括但不限于此,可根据具体情况进行合理选择。The protecting group includes, but is not limited to, a reasonable selection according to a specific situation.
所述步骤(a)的液相环境所用溶剂选自:二甲基甲酰胺(DMF)、二氯甲烷(DCM)、N-甲基吡咯烷酮(NMP),优选DMF。The solvent used in the liquid phase environment of the step (a) is selected from the group consisting of dimethylformamide (DMF), dichloromethane (DCM), N-methylpyrrolidone (NMP), preferably DMF.
所述步骤(a)中脱除氨基保护基需要加入氨基保护基的脱除剂,氨基保护基的脱除剂选用哌啶(PIP)溶液,浓度10-40%(PIP/DMF),脱除时间为20-50min;优选浓度为20-25%(PIP/DMF),脱除时间25-35min。The removal of the amino protecting group in the step (a) requires the removal of the amino protecting group, and the removal agent of the amino protecting group is selected from piperidine (PIP) solution at a concentration of 10-40% (PIP/DMF). The time is 20-50 min; the preferred concentration is 20-25% (PIP/DMF) and the removal time is 25-35 min.
所述步骤(a)中氨基酸的偶联需要加入偶联试剂,偶联试剂由:碳二亚胺型试剂或者苯并三氮唑鎓盐型试剂和1-羟基苯并三唑(HOBt)组成。The coupling of the amino acid in the step (a) requires the addition of a coupling reagent consisting of a carbodiimide type reagent or a benzotriazole salt type reagent and 1-hydroxybenzotriazole (HOBt). .
所述碳二亚胺型试剂包括但不限于二环己基碳二亚胺(DCC)、二异丙基碳二亚胺(DIC)或N-二氨基丙基-N-乙基碳二亚胺(EDC)。The carbodiimide type reagent includes, but is not limited to, dicyclohexylcarbodiimide (DCC), diisopropylcarbodiimide (DIC) or N-diaminopropyl-N-ethylcarbodiimide. (EDC).
所述苯并三氮唑鎓盐型试剂包括但不限于2-(1H-苯并三偶氮L-1-基)-1,1,3,3-四甲基脲四 氟硼酸酯(TBTU)、O-苯并三唑-N,N,N',N'-四甲基脲六氟磷酸盐(HBTU)、六氟磷酸苯并三唑-1-氧基三(二甲氨基)磷(BOP)或六氟磷酸苯并三唑-1-基-氧基三吡咯烷基磷(PyBOP)。The benzotriazolium salt type reagent includes, but is not limited to, 2-(1H-benzotriazo L-1-yl)-1,1,3,3-tetramethyluronium tetrafluoroborate ( TBTU), O-benzotriazole-N,N,N',N'-tetramethylurea hexafluorophosphate (HBTU), benzotriazole-1-oxotris(dimethylamino) hexafluorophosphate Phosphorus (BOP) or benzotriazol-1-yl-oxytripyrrolidinylphosphonium hexafluorophosphate (PyBOP).
所述偶联试剂优选二异丙基碳二亚胺(DIC)和1-羟基苯并三唑(HOBt),或2-(1H-苯并三偶氮L-1-基)-1,1,3,3-四甲基脲四氟硼酸酯(TBTU)和1-羟基苯并三唑(HOBt),进一步优选DIC(二异丙基碳二亚胺)和1-羟基苯并三唑(HOBt)。The coupling reagent is preferably diisopropylcarbodiimide (DIC) and 1-hydroxybenzotriazole (HOBt), or 2-(1H-benzotriazo L-1-yl)-1,1. , 3,3-tetramethyluronium tetrafluoroborate (TBTU) and 1-hydroxybenzotriazole (HOBt), further preferably DIC (diisopropylcarbodiimide) and 1-hydroxybenzotriazole (HOBt).
所述步骤(a)中的“监测”采用茚三酮检测法监测多肽的缩合反应。The "monitoring" in step (a) uses a ninhydrin assay to monitor the condensation reaction of the polypeptide.
所述步骤(a)中的顺序连接氨基酸是指根据多肽氨基酸序列从C端向N端逐个连接氨基酸。The sequential linking of amino acids in the step (a) means that the amino acids are linked one by one from the C-terminus to the N-terminus according to the amino acid sequence of the polypeptide.
所述步骤(b)环化氨基酸为Xaa6与Xaa12,通过其侧链氨基与羧基形成酰胺键而成环。The cyclized amino acid in the step (b) is Xaa6 and Xaa12, and a ring is formed by forming an amide bond between a side chain amino group and a carboxyl group.
步骤(b)中成环采用的是正交保护策略,成环氨基酸侧链上的氨基保护基为烯丙氧羰基(Alloc),羧基保护基为烯丙基(OAll)。In the step (b), an orthogonal protection strategy is employed for the ring formation, the amino protecting group on the side chain of the ring-forming amino acid is allyloxycarbonyl (Alloc), and the carboxyl protecting group is allyl (OAll).
步骤(b)中脱去Alloc与OAll需要加入脱除剂,使用的脱除剂为四(三苯基膦)钯((Pd(PPh 3) 4)。 The removal of Alloc and OAll in step (b) requires the addition of a remover, and the remover used is tetrakis(triphenylphosphine)palladium ((Pd(PPh 3 ) 4 )).
步骤(b)中使用(Pd(PPh 3) 4)脱Alloc与OAll需要加入清除剂,清除剂可选用H 3N·BH 3,Me 2NH·BH 3或PhSiH 3,优选PhSiH 3The use of (Pd(PPh 3 ) 4 ) for the removal of Alloc and OAll in step (b) requires the addition of a scavenger, and the scavenger may be selected from H 3 N·BH 3 , Me 2 NH·BH 3 or PhSiH 3 , preferably PhSiH 3 .
步骤(b)中环化反应需要加入偶联试剂,偶联试剂由:碳二亚胺型试剂或叔胺型和苯并三氮唑鎓盐型试剂或吡啶三唑翁盐型组成。The cyclization reaction in the step (b) requires the addition of a coupling reagent consisting of a carbodiimide type reagent or a tertiary amine type and a benzotriazole salt type reagent or a pyridine triazolium salt type.
其中,所述碳二亚胺型试剂包括但不限于二环己基碳二亚胺(DCC)、二异丙基碳二亚胺(DIC)或N-二氨基丙基-N-乙基碳二亚胺(EDC)。Wherein the carbodiimide type reagent includes, but is not limited to, dicyclohexylcarbodiimide (DCC), diisopropylcarbodiimide (DIC) or N-diaminopropyl-N-ethylcarbamate Imine (EDC).
所述叔胺型试剂包括但不限于N,N-二异丙基乙胺(DIEA)。The tertiary amine type reagents include, but are not limited to, N,N-diisopropylethylamine (DIEA).
所述苯并三氮唑鎓盐型试剂包括但不限于2-(1H-苯并三偶氮L-1-基)-1,1,3,3-四甲基脲四氟硼酸酯(TBTU)、O-苯并三唑-N,N,N',N'-四甲基脲六氟磷酸盐(HBTU)、六氟磷酸苯并三唑-1-氧基三(二甲氨基)磷(BOP)或六氟磷酸苯并三唑-1-基-氧基三吡咯烷基磷(PyBOP)。The benzotriazolium salt type reagent includes, but is not limited to, 2-(1H-benzotriazo L-1-yl)-1,1,3,3-tetramethyluronium tetrafluoroborate ( TBTU), O-benzotriazole-N,N,N',N'-tetramethylurea hexafluorophosphate (HBTU), benzotriazole-1-oxotris(dimethylamino) hexafluorophosphate Phosphorus (BOP) or benzotriazol-1-yl-oxytripyrrolidinylphosphonium hexafluorophosphate (PyBOP).
所述吡啶三唑翁盐型包括但不局限于(3H-1,2,3-三唑并[4,5-b]吡啶-3-氧基)三-1-吡咯烷基六氟磷酸盐(PyAOP)、2-(7-偶氮苯并三氮唑)-N,N,N',N'-四甲基脲六氟磷酸酯(HATU)、7-氮杂苯并三唑-1-基氧基三(二甲胺基)膦六氟磷酸盐(AOP)。The pyridine triazolium salt type includes, but is not limited to, (3H-1,2,3-triazolo[4,5-b]pyridin-3-yloxy)tri-1-pyrrolidinyl hexafluorophosphate (PyAOP), 2-(7-azobenzotriazole)-N,N,N',N'-tetramethyluronium hexafluorophosphate (HATU), 7-azabenzotriazole-1 - methoxytris(dimethylamino)phosphine hexafluorophosphate (AOP).
所述偶联试剂优选二异丙基碳二亚胺(DIC)和1-羟基苯并三唑(HOBt),或2-(1H-苯并三偶氮L-1-基)-1,1,3,3-四甲基脲四氟硼酸酯(TBTU)和1-羟基苯并三唑(HOBt)或N,N-二异丙基乙胺(DIEA)和2-(7-偶氮苯并三氮唑)-N,N,N',N'-四甲基脲六氟磷酸酯(HATU)。进一步优选N,N-二异丙基乙胺(DIEA)和2-(7-偶氮苯并三氮唑)-N,N,N',N'-四甲基脲六氟磷酸酯(HATU)。The coupling reagent is preferably diisopropylcarbodiimide (DIC) and 1-hydroxybenzotriazole (HOBt), or 2-(1H-benzotriazo L-1-yl)-1,1. , 3,3-tetramethylurea tetrafluoroborate (TBTU) and 1-hydroxybenzotriazole (HOBt) or N,N-diisopropylethylamine (DIEA) and 2-(7-azo Benzotriazole)-N,N,N',N'-tetramethylurea hexafluorophosphate (HATU). Further preferred are N,N-diisopropylethylamine (DIEA) and 2-(7-azobenzotriazole)-N,N,N',N'-tetramethyluronium hexafluorophosphate (HATU) ).
任选地,所述步骤(1)还包括:(c)步骤(b)得到的树脂肽连接脂肪酸链,所述脂肪酸链可以是一元、二元或其他多元脂肪酸链。Optionally, the step (1) further comprises: (c) the resin peptide obtained in the step (b) is linked to a fatty acid chain, which may be a mono-, di- or other polybasic fatty acid chain.
所述步骤(c)中偶联剂为二异丙基碳二亚胺(DIC)和1-羟基苯并三唑(HOBt),反应溶剂为DMF。The coupling agent in the step (c) is diisopropylcarbodiimide (DIC) and 1-hydroxybenzotriazole (HOBt), and the reaction solvent is DMF.
步骤(2)所述的侧链保护基清除剂包括但不限于茴香硫醚、三异丙基硅烷、苯酚、水、1,2-乙二硫醇、间甲酚或上述任意两种或者两种以上的组合,并与三氟乙酸或氢氟酸按5-20%(V/V)进行配制得到。优选三氟乙酸(TFA):茴香硫醚:75%苯酚:水=85:5:5:5(V/V/V/V)。The side chain protecting group scavenger according to the step (2) includes, but not limited to, thioanisole, triisopropylsilane, phenol, water, 1,2-ethanedithiol, m-cresol or any two or two of the above The above combination is prepared and prepared by trifluoroacetic acid or hydrofluoric acid at 5-20% (V/V). Preferred is trifluoroacetic acid (TFA): thioanisole: 75% phenol: water = 85:5:5:5 (V/V/V/V).
本发明所涉及的多肽C末端若为羧酸形式,则步骤(1)采用Wang树脂进行合成;本发明所涉及的多肽C末端若为酰胺形式,则步骤(1)采用Rink Amide MBHA树脂进行合成。If the C-terminus of the polypeptide of the present invention is in the form of a carboxylic acid, the step (1) is carried out by using Wang resin; if the C-terminus of the polypeptide of the present invention is in the form of an amide, the step (1) is synthesized by using Rink Amide MBHA resin. .
特别有益的是为满足医药用途的质量要求,本发明所提供的多肽制备方法还可以进一步包括纯化步骤。所采用的纯化方法包括但不限于反相色谱法或离子交换色谱法,优选反相色谱法。It is particularly advantageous that the polypeptide preparation method provided by the present invention may further comprise a purification step in order to meet the quality requirements for medical use. Purification methods employed include, but are not limited to, reverse phase chromatography or ion exchange chromatography, preferably reverse phase chromatography.
本发明所涉及多肽的体外抗菌活性可以通过测定其最低抑菌浓度(MIC)来鉴定。美国临床实验室标准化委员会(NCCLS)推荐采用微量肉汤稀释法来测定各抗菌肽的最低抑菌浓度(MIC),培养基采用Mueller-Hinton(MH)肉汤培养基以及改良型RPMI-1640培养基。以两性霉素B、硫酸多黏菌素E及盐酸万古霉素作为阳性对照。体外活性测定表明,本发明提供的抗菌肽具有更高的抗菌活性,特别抗阴性菌(如铜绿假单胞菌)或抗耐药菌(如耐药鲍曼不动杆菌、耐药铜绿假单胞菌)的活性得到显著改善。The in vitro antibacterial activity of the polypeptides of the invention can be identified by determining its minimum inhibitory concentration (MIC). The American Clinical Laboratory Standardization Committee (NCCLS) recommends the use of micro-broth dilution to determine the minimum inhibitory concentration (MIC) of each antimicrobial peptide. The medium is cultured in Mueller-Hinton (MH) broth and modified RPMI-1640. base. Amphotericin B, polymyxin E sulfate and vancomycin hydrochloride were used as positive controls. In vitro activity assays indicate that the antimicrobial peptides provided by the present invention have higher antibacterial activity, particularly anti-negative bacteria (such as Pseudomonas aeruginosa) or anti-resistant bacteria (such as drug-resistant Acinetobacter baumannii, drug-resistant patina) The activity of the bacterium was significantly improved.
定义definition
除非另有说明,本申请中所用的下列术语具有下列含义。一个特定的术语在没有特别定义的情况下不应该被认为是不确定的或不清楚的,而应该按照本领域普通的含义去理解。当本文中出现商品名时,意在指代其对应的商品或其活性成分。Unless otherwise stated, the following terms as used in this application have the following meanings. A particular term should not be considered as undefined or unclear without a particular definition, and should be understood in the ordinary meaning of the art. When a trade name appears in this document, it is intended to refer to its corresponding commodity or its active ingredient.
术语“脂肪族直链或支链C 6-C 20的酰基基团”,是指含有羰基基团部分和非羰基基团部分的取代基,所述非羰基基团包括脂肪族直链或支链基团,包括但不限于烷基、环烷基、烯烃基以及炔基等。本发明中包括但不限于已知多粘菌素化合物中发现的酰基基团,其包括,庚酰基、甲基庚酰基(包括(S)-6-甲基庚酰基)、辛酰基、甲基辛酰基(包括(S)-6-甲基辛酰基、(S)-7-甲基辛酰基)、壬酰基、甲基壬酰基(包括(S)-6-甲基壬酰基、(S)-7-甲基壬酰基和(S)-8-甲基壬酰基)和癸酰基。本发明中,还包括月桂酰基、棕榈酰基、肉豆蔻酰基以及17-羧酸-十七烷酰基。所述“月桂酰基”、“棕榈酰基”以及“肉豆蔻酰基”是指月桂酸、棕榈酸以及肉豆蔻酸中羟基被取代。所述17-羧酸-十七烷酰基通常是指: The term "aliphatic straight-chain or branched C 6 -C 20 acyl group" means a substituent containing a carbonyl group moiety and a non-carbonyl group moiety, and the non-carbonyl group includes an aliphatic straight chain or a branch. Chain groups include, but are not limited to, alkyl groups, cycloalkyl groups, alkene groups, and alkynyl groups. The invention includes, but is not limited to, acyl groups found in known polymyxin compounds, including heptanoyl, methylheptanoyl (including (S)-6-methylheptanoyl), octanoyl, methyl octyl Acyl (including (S)-6-methyloctanoyl, (S)-7-methyloctanoyl), decanoyl, methyldecanoyl (including (S)-6-methyldecanoyl, (S)- 7-methyldecanoyl and (S)-8-methyldecanoyl) and decanoyl. In the present invention, lauroyl, palmitoyl, myristoyl and 17-carboxylic acid-heptadecanoyl are also included. The "lauroyl", "palmitoyl" and "myristoyl" refer to a hydroxy group in lauric acid, palmitic acid, and myristic acid substituted. The 17-carboxylic acid-heptadecanoyl group generally means:
Figure PCTCN2018112889-appb-000014
Figure PCTCN2018112889-appb-000014
术语“脂肪酸链”是指包含脂肪族直链或支链部分以及一个、两个或多个羧基基团部分的取代基,所述脂肪族直链或支链部分包括但不限于烷基、环烷基、烯烃基以及炔基等,所述一个、两个或多个羧基基团部分是指包含单羧基基团、二羧基基团或更多羧基基团,术语“一元脂肪酸链”是指包含脂肪族直链或支链部分以及一个羧基基团部分的取代基,术语“二元脂肪酸链”是指包含脂肪族直链或支链部分以及两个羧基基团部分的取代基,术语“多元脂肪酸链”是指包含脂肪族直链或支链部分以及多个羧基基团部分的取代基The term "fatty acid chain" refers to a substituent comprising an aliphatic straight or branched chain moiety and one, two or more carboxyl group moieties including, but not limited to, an alkyl group, a ring An alkyl group, an alkene group, an alkynyl group or the like, the one, two or more carboxyl group moieties are meant to comprise a monocarboxyl group, a dicarboxyl group or more, and the term "monobasic fatty acid chain" means a substituent comprising an aliphatic straight or branched chain moiety and a carboxyl group moiety, the term "dibasic fatty acid chain" means a substituent comprising an aliphatic straight or branched chain moiety and two carboxyl group moieties, the term " "polybasic fatty acid chain" means a substituent comprising an aliphatic straight or branched chain moiety and a plurality of carboxyl group moieties
术语“被取代的”是指特定原子上的任意一个或多个氢原子被取代基取代,只要特定原子的价态是正常的并且取代后的化合物是稳定的。当取代基为酮基(即=O)时,意味着两个氢原子被取代,酮取代不会发生在芳香基上。The term "substituted" means that any one or more hydrogen atoms on a particular atom are replaced by a substituent as long as the valence of the particular atom is normal and the substituted compound is stable. When the substituent is a keto group (i.e., =0), it means that two hydrogen atoms are substituted, and the ketone substitution does not occur on the aryl group.
术语“任选”或“任选地”是指随后描述的事件或情况可以发生或不发生,该描述包括发生所述事件或情况和不发生所述事件或情况。例如,乙基“任选”被卤素取代,指乙基可以是未被取代的(CH 2CH 3)、单取代的(如CH 2CH 2F)、多取代的(如CHFCH 2F、CH 2CHF 2等)或完全被取代的(CF 2CF 3)。本领域技术人员可理解,对于包含一个或多个取代基的任何基团,不会引入任何在空间上不可能存在和/或不能合成的取代或取代模式。 The term "optional" or "optionally" means that the subsequently described event or circumstance may or may not occur, the description including the occurrence of the event or condition and the occurrence of the event or condition. For example, an ethyl group "optionally" substituted with halo, refers to an ethyl group may be unsubstituted (CH 2 CH 3), monosubstituted (e.g., CH 2 CH 2 F), polysubstituted (e.g. CHFCH 2 F, CH 2 CHF 2, etc.) or completely substituted (CF 2 CF 3 ). It will be understood by those skilled in the art that for any group containing one or more substituents, no substitution or substitution pattern that is sterically impossible to exist and/or which cannot be synthesized is introduced.
本文所用的C m-n指该部分中具有m-n个碳原子。例如,“碳 3-10环烷基”指该环烷基具有3-10个碳原子。“碳 0-6亚烷基”指该亚烷基具有0-6个碳原子,当亚烷基具有0个碳原子时,该基团为键。 As used herein, C mn means having mn carbon atoms in this moiety. For example, "carbon 3-10 cycloalkyl" means that the cycloalkyl has 3 to 10 carbon atoms. "Carbon 0-6 alkylene" means that the alkylene group has 0 to 6 carbon atoms, and when the alkylene group has 0 carbon atoms, the group is a bond.
本文中的数字范围,是指给定范围中的各个整数。例如“C 1-6”是指该基团可具有1个碳原子、2个碳原子、3个碳原子、4个碳原子、5个碳原子或6个碳原子。 The numerical range in this document refers to each integer in a given range. For example, " C1-6 " means that the group may have 1 carbon atom, 2 carbon atoms, 3 carbon atoms, 4 carbon atoms, 5 carbon atoms or 6 carbon atoms.
当任何变量(例如R)在化合物的组成或结构中出现一次以上时,其在每一种情况下的定义都是独立的。因此,例如,如果一个基团被2个R所取代,则每个R都有独立的选项。When any variable (eg, R) occurs more than once in the composition or structure of a compound, its definition in each case is independent. Thus, for example, if a group is replaced by 2 R, then each R has an independent option.
术语“卤”或“卤素”是指氟、氯、溴和碘。The term "halo" or "halogen" refers to fluoro, chloro, bromo and iodo.
术语“酰基”指-CO-基团。The term "acyl" refers to a -CO- group.
术语“羧基”指-COOH基团。The term "carboxy" refers to a -COOH group.
术语“羟基”指-OH基团。The term "hydroxy" refers to an -OH group.
术语“氰基”指-CN基团。The term "cyano" refers to a -CN group.
术语“巯基”指-SH基团。The term "mercapto" refers to a -SH group.
术语“氨基”指-NH 2基团。 The term "amino" means -NH 2 group.
术语“硝基”指-NO 2基团。 The term "nitro" refers to a -NO 2 group.
术语“烷基”是指通式为C nH 2n+1的烃基。该烷基可以是直链或支链的。例如,术语“烃 1- 6烷基”指含有1至6个碳原子的单价直链或支链脂肪族基团(例如甲基、乙基、正丙基、异丙基、正丁基、异丁基、仲丁基、叔丁基、正戊基、1-甲基丁基、2-甲基丁基、3-甲基丁基、新戊基、3,3-二甲基丙基、己基、2-甲基戊基等)。类似地,烷氧基、烷基氨基、二烷基氨基、烷基磺酰基和烷硫基的烷基部分(即烷基)具有上述相同定义。 The term "alkyl" refers to a hydrocarbon group of the formula C n H 2n +. The alkyl group can be straight or branched. For example, the term "hydrocarbon 1 - 6 alkyl" refers to a monovalent straight or branched aliphatic group containing from 1 to 6 carbon atoms (eg, methyl, ethyl, n-propyl, isopropyl, n-butyl, Isobutyl, sec-butyl, tert-butyl, n-pentyl, 1-methylbutyl, 2-methylbutyl, 3-methylbutyl, neopentyl, 3,3-dimethylpropyl , hexyl, 2-methylpentyl, etc.). Similarly, the alkyl moiety (i.e., alkyl) of an alkoxy group, an alkylamino group, a dialkylamino group, an alkylsulfonyl group, and an alkylthio group has the same definition as defined above.
术语“烷氧基”指-O-烷基。The term "alkoxy" refers to -O-alkyl.
术语“烷硫基”指-S-烷基。The term "alkylthio" refers to -S-alkyl.
术语“烷基氨基”指-NH(烷基)。The term "alkylamino" refers to -NH(alkyl).
术语“二烷基氨基”指-N(烷基) 2The term "dialkylamino" refers to -N(alkyl) 2 .
术语“烯基”是指由碳原子和氢原子组成的直链或支链的具有至少一个双键的不饱和脂肪族烃基。烯基的非限制性实例包括但不限于乙烯基、1-丙烯基、2-丙烯基、1-丁烯基、异丁烯基、1,3-丁二烯基等。The term "alkenyl" refers to a straight or branched unsaturated aliphatic hydrocarbon group having at least one double bond consisting of a carbon atom and a hydrogen atom. Non-limiting examples of alkenyl groups include, but are not limited to, ethenyl, 1-propenyl, 2-propenyl, 1-butenyl, isobutenyl, 1,3-butadienyl, and the like.
术语“炔基”是指由碳原子和氢原子组成的直链或支链的具有至少一个三键的不饱和脂肪族烃基。炔基的非限制性实例包括但不限于乙炔基(-C由碳原)、1-丙炔基(-C基(原子和 3)、2-丙炔基(-CH 2-CH(原)、1,3-丁二炔基(-C炔基(子和氢原)等。 The term "alkynyl" means a straight or branched unsaturated aliphatic hydrocarbon group having at least one triple bond composed of a carbon atom and a hydrogen atom. Non-limiting examples of alkynyl groups include, but are not limited to, ethynyl (-C a carbon atom), 1-propynyl (-C group (atoms, and 3), 2-propynyl (-CH 2 -CH (original) And 1,3-butadiynyl (-C alkynyl (sub and hydrogen) and the like.
术语“环烷基”指完全饱和的并且可以以呈单环、稠环或螺环存在的碳环。除非另有指示,该碳环通常为3至10元环,优选为3至8元环。环烷基非限制性实例包括但不限于环丙基、环丁基、环戊基、环己基、降冰片基(双环[2.2.1]庚基)、双环[2.2.2]辛基、金刚烷基等。The term "cycloalkyl" refers to a carbocyclic ring that is fully saturated and can exist as a single ring, fused ring or spiro ring. Unless otherwise indicated, the carbocyclic ring is typically a 3 to 10 membered ring, preferably a 3 to 8 membered ring. Non-limiting examples of cycloalkyl groups include, but are not limited to, cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, norbornyl (bicyclo[2.2.1]heptyl), bicyclo[2.2.2]octyl, diamond Alkyl and the like.
术语“芳基”是指具有共轭的π电子体系的全碳单环或稠合多环的芳香环基团。例如,芳基可以具有6-20个碳原子,6-14个碳原子或6-12个碳原子。芳基的非限制性实例包括但不限于苯基、萘基和蒽基等。The term "aryl" refers to an all-carbon monocyclic or fused polycyclic aromatic ring group having a conjugated π-electron system. For example, an aryl group can have 6-20 carbon atoms, 6-14 carbon atoms or 6-12 carbon atoms. Non-limiting examples of aryl groups include, but are not limited to, phenyl, naphthyl, anthracenyl, and the like.
术语“杂芳基”是指单环或稠合多环体系,其中含有至少一个选自N、O、S的环原子,其余环原子为C,并且具有至少一个芳香环。优选的杂芳基具有单个4至8元环,尤其是5至8元环,或包含6至14个,尤其是6至10个环原子的多个稠合环。杂芳基的非限制性实例包括但不限于吡咯基、呋喃基、噻吩基、咪唑基、噁唑基、吡唑基、吡啶基、嘧啶基、吡嗪基、喹啉基、异喹啉基、四唑基、三唑基、三嗪基、苯并呋喃基、苯并噻吩基、吲哚基、异吲哚基等。The term "heteroaryl" refers to a monocyclic or fused polycyclic ring system containing at least one ring atom selected from N, O, S, the remaining ring atoms being C, and having at least one aromatic ring. Preferred heteroaryl groups have a single 4 to 8 membered ring, especially a 5 to 8 membered ring, or a plurality of fused rings containing from 6 to 14, especially from 6 to 10 ring atoms. Non-limiting examples of heteroaryl groups include, but are not limited to, pyrrolyl, furyl, thienyl, imidazolyl, oxazolyl, pyrazolyl, pyridyl, pyrimidinyl, pyrazinyl, quinolinyl, isoquinolinyl , tetrazolyl, triazolyl, triazinyl, benzofuranyl, benzothienyl, fluorenyl, isodecyl and the like.
术语“治疗”意为将本申请所述化合物或制剂进行给药以预防、改善或消除疾病或与所述疾病相关的一个或多个症状,且包括:The term "treating" means administering a compound or formulation described herein to prevent, ameliorate or eliminate a disease or one or more symptoms associated with the disease, and includes:
(i)预防疾病或疾病状态在哺乳动物中出现,特别是当这类哺乳动物易患有该疾病状态,但尚未被诊断为已患有该疾病状态时;(i) preventing a disease or disease state from occurring in a mammal, particularly when such a mammal is susceptible to the disease state but has not been diagnosed as having the disease state;
(ii)抑制疾病或疾病状态,即遏制其发展;(ii) inhibiting the disease or disease state, ie, curbing its development;
(iii)缓解疾病或疾病状态,即使该疾病或疾病状态消退。(iii) alleviating the disease or condition, even if the disease or condition resolves.
术语“治疗有效量”意指(i)治疗或预防特定疾病、病况或障碍,(ii)减轻、改善或消除特定疾病、病况或障碍的一种或多种症状,或(iii)预防或延迟本文中所述的特定疾病、病况或障碍的一种或多种症状发作的本申请化合物的用量。构成“治疗有效量”的本申请化合物的量取决于该化合物、疾病状态及其严重性、给药方式以及待被治疗的哺乳动物的年龄而改变,但可例行性地由本领域技术人员根据其自身的知识及本公开内容而确定。The term "therapeutically effective amount" means (i) treating or preventing a particular disease, condition or disorder, (ii) alleviating, ameliorating or eliminating one or more symptoms of a particular disease, condition or disorder, or (iii) preventing or delaying The amount of a compound of the present application in which one or more symptoms of a particular disease, condition, or disorder are described herein. The amount of a compound of the present application which constitutes a "therapeutically effective amount" will vary depending on the compound, the condition and severity thereof, the mode of administration, and the age of the mammal to be treated, but can be routinely determined by those skilled in the art It is determined by its own knowledge and the present disclosure.
术语“药学上可接受的”,是针对那些化合物、材料、组合物和/或剂型而言,它们在可靠的医学判断的范围之内,适用于与人类和动物的组织接触使用,而没有过多的毒性、刺激性、过敏性反应或其它问题或并发症,与合理的利益/风险比相称。The term "pharmaceutically acceptable" is for those compounds, materials, compositions and/or dosage forms that are within the scope of sound medical judgment and are suitable for use in contact with human and animal tissues without Many toxic, irritating, allergic reactions or other problems or complications are commensurate with a reasonable benefit/risk ratio.
作为药学上可接受的盐,例如,可以提及金属盐、铵盐、与有机碱形成的盐、与无机酸形成的盐、与有机酸形成的盐、与碱性或者酸性氨基酸形成的盐等。金属盐的非限制性实例包括但不限于碱金属的盐,例如钠盐、钾盐等;碱土金属的盐,例如钙盐、镁盐、钡盐等;铝盐等。与有机碱形成的盐的非限制性实例包括但不限于与三甲胺、三乙胺、吡啶、甲基吡啶、2,6-二甲基吡啶、乙醇胺、二乙醇胺、三乙醇胺、环己胺、二环己基胺等形成的盐。与无机酸形成的盐的非限制性实例包括但不限于与盐酸、氢溴酸、硝酸、硫酸、磷酸等形成的盐。与有机酸形成的盐的非限制性实例包括但不限于与甲酸、乙酸、三氟乙酸、富马酸、草酸、苹果酸、马来酸、酒石酸、柠檬酸、琥珀酸、甲磺酸、苯磺酸、对甲基苯磺酸等形成的盐。与碱性氨基酸形成的盐的非限制性实例包括但不限于与精氨酸、赖氨酸、鸟氨酸等形成的盐。与酸性氨基酸形成的盐的非限制性实例包括但不限于与天冬氨酸、谷氨酸等形成的盐。As the pharmaceutically acceptable salt, for example, a metal salt, an ammonium salt, a salt with an organic base, a salt with an inorganic acid, a salt with an organic acid, a salt with a basic or acidic amino acid, or the like can be mentioned. . Non-limiting examples of metal salts include, but are not limited to, salts of alkali metals such as sodium salts, potassium salts, and the like; salts of alkaline earth metals such as calcium salts, magnesium salts, barium salts, and the like; aluminum salts and the like. Non-limiting examples of salts formed with organic bases include, but are not limited to, with trimethylamine, triethylamine, pyridine, picoline, 2,6-lutidine, ethanolamine, diethanolamine, triethanolamine, cyclohexylamine, A salt formed by dicyclohexylamine or the like. Non-limiting examples of salts formed with inorganic acids include, but are not limited to, salts formed with hydrochloric acid, hydrobromic acid, nitric acid, sulfuric acid, phosphoric acid, and the like. Non-limiting examples of salts formed with organic acids include, but are not limited to, with formic acid, acetic acid, trifluoroacetic acid, fumaric acid, oxalic acid, malic acid, maleic acid, tartaric acid, citric acid, succinic acid, methanesulfonic acid, benzene. a salt formed of a sulfonic acid, p-toluenesulfonic acid or the like. Non-limiting examples of salts formed with basic amino acids include, but are not limited to, salts formed with arginine, lysine, ornithine, and the like. Non-limiting examples of salts formed with acidic amino acids include, but are not limited to, salts formed with aspartic acid, glutamic acid, and the like.
术语“药物组合物”是指一种或多种本申请的化合物或其盐与在本领域中通常接受的用于将生物活性化合物输送至有机体(例如人)的赋形剂、稀释剂、或载体的制剂。药物组合物的目的是有利于对有机体给予本申请的化合物。The term "pharmaceutical composition" refers to one or more compounds of the present application, or salts thereof, and excipients, diluents, or agents generally accepted in the art for delivery of a biologically active compound to an organism (eg, a human), or Formulation of the carrier. The purpose of the pharmaceutical composition is to facilitate administration of the compounds of the present application to an organism.
术语“药学上可接受的赋形剂、稀释剂、或载体”是指对有机体无明显刺激作用,而且不会损害该活性化合物的生物活性及性能的那些赋形剂、稀释剂、或载体。合适的载体、稀释剂及赋形剂是本领域技术人员熟知的,并且包括诸如碳水化合物、蜡、水溶性和/或水可膨胀的聚合物、亲水性或疏水性材料、明胶、油、溶剂、水等原料。The term "pharmaceutically acceptable excipient, diluent, or carrier" refers to those excipients, diluents, or carriers that do not significantly irritate the organism and which do not impair the biological activity and properties of the active compound. Suitable carriers, diluents and excipients are well known to those skilled in the art and include, for example, carbohydrates, waxes, water soluble and/or water swellable polymers, hydrophilic or hydrophobic materials, gelatin, oil, Raw materials such as solvents and water.
本申请还包括与本文中记载的那些相同的,但一或多个原子被原子量或质量数不同于自然中通常发现的原子量或质量数不同的原子置换的同位素标记的本申请化合物。可结合到本 申请化合物的同位素的实例包括氢、碳、氮、氧、磷、硫、氟、碘和氯的同位素,诸如分别为 2H、 3H、 11C、 13C、 14C、 13N、 15N、 15O、 17O、 18O、 31P、 32P、 35S、 18F、 123I、 125I和 36Cl等。 The present application also includes isotopically labeled compounds of the present application which are identical to those described herein, but wherein one or more atoms are replaced by an atom having a different atomic weight or mass than the atomic or mass number normally found in nature. Examples of isotopes that may be incorporated into the compounds of the present application include isotopes of hydrogen, carbon, nitrogen, oxygen, phosphorus, sulfur, fluorine, iodine, and chlorine, such as 2 H, 3 H, 11 C, 13 C, 14 C, 13 respectively. N, 15 N, 15 O, 17 O, 18 O, 31 P, 32 P, 35 S, 18 F, 123 I, 125 I and 36 Cl, and the like.
某些同位素标记的本申请化合物(例如用 3H及 14C标记的那些)可用于化合物和/或底物组织分布分析中。氚化(即 3H)和碳-14(即 14C)同位素对于由于它们易于制备和可检测性是尤其优选的。此外,用较重同位素(诸如氘(即 2H))取代可以提供某些由更高的代谢稳定性产生的治疗优点(例如增加的体内半衰期或降低的剂量需求),并且因此在某些情形下可能是优选的。正电子发射同位素,诸如 15O、 13N、 11C和 18F可用于正电子发射断层扫描(PET)研究以测定底物占有率。通常可以通过与公开于下文的方案和/或实施例中的那些类似的下列程序,通过同位素标记试剂取代未经同位素标记的试剂来制备同位素标记的本申请化合物。 Certain isotopically-labeled compounds of the present application (such as those labeled with 3 H and 14 C) can be used in compound and/or substrate tissue distribution assays. Deuterated (i.e., 3 H) and carbon-14 (i.e., 14 C) isotopes are especially preferred for their ease of preparation and detectability. Furthermore, substitution with heavier isotopes such as deuterium (ie, 2 H) can provide certain therapeutic advantages resulting from higher metabolic stability (eg, increased in vivo half-life or reduced dosage requirements), and thus in some cases The following may be preferred. Positron emitting isotopes such as 15 O, 13 N, 11 C and 18 F can be used in positron emission tomography (PET) studies to determine substrate occupancy. Isotopically labeled compounds of the present application can generally be prepared by substituting an isotopically labeled reagent for an unisotopically labeled reagent by procedures similar to those disclosed in the schemes and/or examples disclosed below.
具体实施方案Specific implementation
本申请的化合物可以通过本领域技术人员所熟知的多种合成方法来制备,包括下面列举的具体实施方式、其与其他化学合成方法的结合所形成的实施方式以及本领域技术上人员所熟知的等同替换方式,优选的实施方式包括但不限于本申请的实施例。The compounds of the present application can be prepared by a variety of synthetic methods well known to those skilled in the art, including the specific embodiments listed below, combinations thereof with other chemical synthesis methods, and those well known to those skilled in the art. Equivalent alternatives, preferred embodiments include, but are not limited to, embodiments of the present application.
本申请具体实施方式的化学反应是在合适的溶剂中完成的,所述的溶剂须适合于本申请的化学变化及其所需的试剂和物料。为了获得本申请的化合物,有时需要本领域技术人员在已有实施方式的基础上对合成步骤或者反应流程进行修改或选择。The chemical reactions of the specific embodiments of the present application are accomplished in a suitable solvent which is suitable for the chemical changes of the present application and the reagents and materials required thereof. In order to obtain the compounds of the present application, it is sometimes necessary for those skilled in the art to modify or select the synthetic steps or reaction schemes based on the prior embodiments.
以下实施例仅代表本发明阐述的一个方面,不是本发明主题的局限。例如,本发明包括但不限于如下各项:The following examples are merely representative of one aspect of the invention and are not a limitation of the subject matter of the invention. For example, the invention includes, but is not limited to, the following:
1.多肽或其药用盐,所述多肽与式I所示的序列具有至少70%的序列同一性:A polypeptide or a pharmaceutically acceptable salt thereof, which polypeptide has at least 70% sequence identity to the sequence of Formula I:
R1-Xaa1-Xaa2-Xaa3-Xaa4-Xaa5-Xaa6-Xaa7-Xaa8-Xaa9-Xaa10-Xaa11-Xaa12(式I),R1-Xaa1-Xaa2-Xaa3-Xaa4-Xaa5-Xaa6-Xaa7-Xaa8-Xaa9-Xaa10-Xaa11-Xaa12 (Formula I),
其中,R1为:脂肪族直链或支链C 6-C 20的酰基基团或缺失; Wherein R1 is: an aliphatic straight-chain or branched C 6 -C 20 acyl group or a deletion;
Xaa1为:Leu,Ala,AEEAc,Phe,IPhe,BrPhe,3FPhe或缺失;Xaa1 is: Leu, Ala, AEEAc, Phe, IPhe, BrPhe, 3FPhe or deletion;
Xaa2为:Leu,Ala,Arg,AEEAc或缺失;Xaa2 is: Leu, Ala, Arg, AEEAc or deletion;
Xaa3为:Dab,Ala,Leu,Orn或缺失;Xaa3 is: Dab, Ala, Leu, Orn or missing;
Xaa4为:Thr,Ala,Dab或Lys;Xaa4 is: Thr, Ala, Dab or Lys;
Xaa5为:Dab,Lys,Orn,Ala或缺失;Xaa5 is: Dab, Lys, Orn, Ala or missing;
Xaa6为:Lys,Glu或Dab;Xaa6 is: Lys, Glu or Dab;
Xaa7为:Dab,Ala,Lys,Orn或缺失;Xaa7 is: Dab, Ala, Lys, Orn or missing;
Xaa8为:D-Leu,D-Phe,Lys或D-Ala;Xaa8 is: D-Leu, D-Phe, Lys or D-Ala;
Xaa9为:Leu或Ala;Xaa9 is: Leu or Ala;
Xaa10为:Dab,Leu,Orn,Ala,D-Leu或缺失;Xaa10 is: Dab, Leu, Orn, Ala, D-Leu or deletion;
Xaa11为:Dab,Leu,Orn,Ala,D-Leu或缺失;Xaa11 is: Dab, Leu, Orn, Ala, D-Leu or deletion;
Xaa12为:Glu,Lys或Asp。Xaa12 is: Glu, Lys or Asp.
2.如项1所述的多肽或其药用盐,其中所述多肽为环肽。2. The polypeptide of claim 1, or a pharmaceutically acceptable salt thereof, wherein the polypeptide is a cyclic peptide.
3.如项1-2任一项所述的多肽或其药用盐,所述多肽由Xaa6与Xaa12的侧链基团脱水缩合成酰胺键而成环,可选地,所述侧链基团含有氨基和/或羧基。3. The polypeptide according to any one of items 1 to 2, wherein the polypeptide is obtained by dehydration of Xaa6 and a side chain group of Xaa12 to form an amide bond, optionally, the side chain group. The group contains an amino group and/or a carboxyl group.
4.如项1-3任一项所述的多肽或其药用盐,所述R1选自庚酰基、甲基庚酰基、辛酰基、甲基辛酰基、壬酰基、甲基壬酰基、癸酰基、甲基癸酰基、月桂酰基、肉豆蔻酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,优选为正辛酰基、癸酰基、月桂酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,更优选为正辛酰基或缺失;Xaa1优选Leu或缺失,Xaa2优选Leu,Xaa3优选Dab,Xaa4优选Thr,Xaa5优选Dab,Xaa6优选Lys或Dab,Xaa7优选Dab,Xaa8优选D-Phe或D-Leu,Xaa9优选Leu,Xaa10优选Dab,Xaa11优选Dab,和/或Xaa12优选Glu。4. The polypeptide according to any one of items 1 to 3, wherein R1 is selected from the group consisting of heptanoyl, methylheptanoyl, octanoyl, methyloctanoyl, decanoyl, methyl decanoyl, hydrazine Acyl, methyl decanoyl, lauroyl, myristoyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, preferably n-octanoyl, decanoyl, lauroyl, palmitoyl, 17-carboxylic acid-ten Heptanoyl or deletion, more preferably n-octanoyl or deletion; Xaa1 is preferably Leu or deleted, Xaa2 is preferably Leu, Xaa3 is preferably Dab, Xaa4 is preferably Thr, Xaa5 is preferably Dab, Xaa6 is preferably Lys or Dab, Xaa7 is preferably Dab, Xaa8 is preferably D -Phe or D-Leu, Xaa9 is preferably Leu, Xaa10 is preferably Dab, Xaa11 is preferably Dab, and/or Xaa12 is preferably Glu.
5.如项1-3任一项所述的多肽或其药用盐,所述多肽具有如下通式:5. The polypeptide of any one of clauses 1 to 3, wherein the polypeptide has the following formula:
Figure PCTCN2018112889-appb-000015
Figure PCTCN2018112889-appb-000015
其中,R1为:脂肪族直链或支链C 6-C 20的酰基基团或缺失; Wherein R1 is: an aliphatic straight-chain or branched C 6 -C 20 acyl group or a deletion;
Xaa1为:Leu,Ala,AEEAc,Phe,IPhe,BrPhe,3FPhe或缺失;Xaa1 is: Leu, Ala, AEEAc, Phe, IPhe, BrPhe, 3FPhe or deletion;
Xaa2为:Leu,Ala,Arg,AEEAc或缺失;Xaa2 is: Leu, Ala, Arg, AEEAc or deletion;
Xaa3为:Dab,Ala,Leu,Orn或缺失;Xaa3 is: Dab, Ala, Leu, Orn or missing;
Xaa4为:Thr,Ala,Dab或Lys;Xaa4 is: Thr, Ala, Dab or Lys;
Xaa5为:Dab,Lys,Orn,Ala或缺失;Xaa5 is: Dab, Lys, Orn, Ala or missing;
Xaa6为:Lys或Dab;Xaa6 is: Lys or Dab;
Xaa7为:Dab,Ala,Lys,Orn或缺失;Xaa7 is: Dab, Ala, Lys, Orn or missing;
Xaa8为:D-Leu,D-Phe,Lys或D-Ala;Xaa8 is: D-Leu, D-Phe, Lys or D-Ala;
Xaa9为:Leu或Ala;Xaa9 is: Leu or Ala;
Xaa10为:Dab,Leu,Orn,Ala,D-Leu或缺失;Xaa10 is: Dab, Leu, Orn, Ala, D-Leu or deletion;
Xaa11为:Dab,Leu,Orn,Ala,D-Leu或缺失。Xaa11 is: Dab, Leu, Orn, Ala, D-Leu or deletion.
6.如项5所述的多肽或其要药用盐,所述R1选自庚酰基、甲基庚酰基、辛酰基、甲基辛酰基、壬酰基、甲基壬酰基、癸酰基、甲基癸酰基、月桂酰基、肉豆蔻酰基、棕榈酰基、17- 羧酸-十七烷酰基或缺失,优选为正辛酰基、癸酰基、月桂酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,更优选为正辛酰基或缺失;Xaa1优选Leu或缺失,Xaa2优选Leu,Xaa3优选Dab,Xaa4优选Thr,Xaa5优选Dab,Xaa6优选Lys或Dab,Xaa7优选Dab,Xaa8优选D-Phe或D-Leu,Xaa9优选Leu,Xaa10优选Dab,Xaa11优选Dab。6. The polypeptide according to item 5, wherein R1 is selected from the group consisting of heptanoyl, methylheptanoyl, octanoyl, methyloctanoyl, decanoyl, methyldecanoyl, decanoyl, methyl Decanoyl, lauroyl, myristoyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, preferably n-octanoyl, decanoyl, lauroyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or Deletion, more preferably n-octanoyl or deletion; Xaa1 is preferably Leu or deletion, Xaa2 is preferably Leu, Xaa3 is preferably Dab, Xaa4 is preferably Dab, Xaa4 is preferably Thr, Xaa5 is preferably Dab, Xaa6 is preferably Lys or Dab, Xaa7 is preferably Dab, Xaa8 is preferably D-Phe or D -Leu, Xaa9 is preferably Leu, Xaa10 is preferably Dab, and Xaa11 is preferably Dab.
7.如项1-3任一项所述的多肽或其药用盐,所述多肽具有如下通式:7. The polypeptide of any one of clauses 1 to 3, wherein the polypeptide has the following formula:
Figure PCTCN2018112889-appb-000016
Figure PCTCN2018112889-appb-000016
其中,R1为:脂肪族直链或支链C 6-C 20的酰基基团或缺失; Wherein R1 is: an aliphatic straight-chain or branched C 6 -C 20 acyl group or a deletion;
Xaa1为:Leu,Ala,AEEAc,Phe,IPhe,BrPhe,3FPhe或缺失;Xaa1 is: Leu, Ala, AEEAc, Phe, IPhe, BrPhe, 3FPhe or deletion;
Xaa2为:Leu,Ala,Arg,AEEAc或缺失;Xaa2 is: Leu, Ala, Arg, AEEAc or deletion;
Xaa3为:Dab,Ala,Leu,Orn或缺失;Xaa3 is: Dab, Ala, Leu, Orn or missing;
Xaa4为:Thr,Ala,Dab或Lys;Xaa4 is: Thr, Ala, Dab or Lys;
Xaa5为:Dab,Lys,Orn,Ala或缺失;Xaa5 is: Dab, Lys, Orn, Ala or missing;
Xaa7为:Dab,Ala,Lys,Orn或缺失;Xaa7 is: Dab, Ala, Lys, Orn or missing;
Xaa8为:D-Leu,D-Phe,Lys或D-Ala;Xaa8 is: D-Leu, D-Phe, Lys or D-Ala;
Xaa9为:Leu或Ala;Xaa9 is: Leu or Ala;
Xaa10为:Dab,Leu,Orn,Ala,D-Leu或缺失;Xaa10 is: Dab, Leu, Orn, Ala, D-Leu or deletion;
Xaa11为:Dab,Leu,Orn,Ala,D-Leu或缺失;Xaa11 is: Dab, Leu, Orn, Ala, D-Leu or deletion;
Xaa12为:Glu或Asp。Xaa12 is: Glu or Asp.
8.如项7所述的多肽或其药用盐,所述R1选自庚酰基、甲基庚酰基、辛酰基、甲基辛酰基、壬酰基、甲基壬酰基、癸酰基、甲基癸酰基、月桂酰基、肉豆蔻酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,优选为正辛酰基、癸酰基、月桂酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,更优选为正辛酰基或缺失;Xaa1优选Leu或缺失,Xaa2优选Leu,Xaa3优选Dab,Xaa4优选Thr,Xaa5优选Dab,Xaa7优选Dab,Xaa8优选D-Phe或D-Leu,Xaa9优选Leu,Xaa10优选Dab,Xaa11优选Dab,和/或Xaa12优选Glu。8. The polypeptide according to item 7, or a pharmaceutically acceptable salt thereof, wherein R1 is selected from the group consisting of heptanoyl, methylheptanoyl, octanoyl, methyloctanoyl, decanoyl, methyldecanoyl, decanoyl, methylhydrazine Acyl, lauroyl, myristoyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, preferably n-octanoyl, decanoyl, lauroyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion More preferably, it is n-octanoyl or a deletion; Xaa1 is preferably Leu or a deletion, Xaa2 is preferably Leu, Xaa3 is preferably Dab, Xaa3 is preferably Dab, Xaa4 is preferably Thr, Xaa5 is preferably Dab, Xaa7 is preferably Dab, Xaa8 is preferably D-Phe or D-Leu, Xaa9 is preferably Leu, Xaa10 is preferably Dab, Xaa11 is preferably Dab, and/or Xaa12 is preferably Glu.
9.如项1-3任一项所述的多肽或其药用盐,所述多肽具有如下通式:The polypeptide of any one of items 1 to 3, wherein the polypeptide has the following formula:
Figure PCTCN2018112889-appb-000017
Figure PCTCN2018112889-appb-000017
其中,R1为:脂肪族直链或支链C 6-C 20的酰基基团或缺失; Wherein R1 is: an aliphatic straight-chain or branched C 6 -C 20 acyl group or a deletion;
Xaa1为:Leu,Ala,AEEAc,Phe,IPhe,BrPhe,3FPhe或缺失;Xaa1 is: Leu, Ala, AEEAc, Phe, IPhe, BrPhe, 3FPhe or deletion;
Xaa2为:Leu,Ala,Arg,AEEAc或缺失;Xaa2 is: Leu, Ala, Arg, AEEAc or deletion;
Xaa3为:Dab,Ala,Leu,Orn或缺失;Xaa3 is: Dab, Ala, Leu, Orn or missing;
Xaa4为:Thr,Ala,Dab或Lys;Xaa4 is: Thr, Ala, Dab or Lys;
Xaa5为:Dab,Lys,Orn,Ala或缺失;Xaa5 is: Dab, Lys, Orn, Ala or missing;
Xaa7为:Dab,Ala,Lys,Orn或缺失;Xaa7 is: Dab, Ala, Lys, Orn or missing;
Xaa8为:D-Leu,D-Phe,Lys或D-Ala;Xaa8 is: D-Leu, D-Phe, Lys or D-Ala;
Xaa9为:Leu或Ala;Xaa9 is: Leu or Ala;
Xaa10为:Dab,Leu,Orn,Ala,D-Leu或缺失;Xaa10 is: Dab, Leu, Orn, Ala, D-Leu or deletion;
Xaa11为:Dab,Leu,Orn,Ala,D-Leu或缺失。Xaa11 is: Dab, Leu, Orn, Ala, D-Leu or deletion.
10.如项9所述的多肽或其药用盐,所述R1选自庚酰基、甲基庚酰基、辛酰基、甲基辛酰基、壬酰基、甲基壬酰基、癸酰基、甲基癸酰基、月桂酰基、肉豆蔻酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,优选为正辛酰基、癸酰基、月桂酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,更优选为正辛酰基或缺失;Xaa1优选Leu或缺失,Xaa2优选Leu,Xaa3优选Dab,Xaa4优选Thr,Xaa5优选Dab,Xaa7优选Dab,Xaa8优选D-Phe或D-Leu,Xaa9优选Leu,Xaa10优选Dab,Xaa11优选Dab。10. The polypeptide according to item 9, or a pharmaceutically acceptable salt thereof, wherein R1 is selected from the group consisting of heptanoyl, methylheptanoyl, octanoyl, methyloctanoyl, decanoyl, methyldecanoyl, decanoyl, methylhydrazine Acyl, lauroyl, myristoyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, preferably n-octanoyl, decanoyl, lauroyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion More preferably, it is n-octanoyl or a deletion; Xaa1 is preferably Leu or a deletion, Xaa2 is preferably Leu, Xaa3 is preferably Dab, Xaa3 is preferably Dab, Xaa4 is preferably Thr, Xaa5 is preferably Dab, Xaa7 is preferably Dab, Xaa8 is preferably D-Phe or D-Leu, Xaa9 is preferably Leu, Xaa10 is preferably Dab, and Xaa11 is preferably Dab.
11.如项1-4任一项所述的多肽或其药用盐,所述多肽是由R1-Leu-Dab-Thr-Dab-Xaa6-Dab-Xaa8-Leu-Dab-Dab-Glu所示的序列组成的肽或环肽,其中R1优选为正辛酰基、癸酰基、月桂酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,更优选为正辛酰基或缺失;Xaa6优选Lys或Dab,Xaa8优选D-Phe或D-Leu。The polypeptide according to any one of items 1 to 4, wherein the polypeptide is represented by R1-Leu-Dab-Thr-Dab-Xaa6-Dab-Xaa8-Leu-Dab-Dab-Glu a sequence consisting of a peptide or a cyclic peptide, wherein R1 is preferably n-octanoyl, decanoyl, lauroyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, more preferably n-octanoyl or a deletion; Xaa6 is preferably Lys Or Dab, Xaa8 is preferably D-Phe or D-Leu.
12.如项11所述的多肽或其药用盐,所述多肽是由H 2N-Leu-Dab-Thr-Dab-Lys-Dab-D-Phe-Leu-Dab-Dab-Glu组成的肽或环肽。 12. The polypeptide according to item 11, or a pharmaceutically acceptable salt thereof, which is a peptide consisting of H 2 N-Leu-Dab-Thr-Dab-Lys-Dab-D-Phe-Leu-Dab-Dab-Glu Or a cyclic peptide.
13.如项12所述的多肽或其药用盐,所述多肽氨基酸序列如下:13. The polypeptide of claim 12, or a pharmaceutically acceptable salt thereof, the amino acid sequence of the polypeptide is as follows:
Figure PCTCN2018112889-appb-000018
Figure PCTCN2018112889-appb-000018
14.如项1-4任一项所述的多肽或其药用盐,所述多肽是由R1-Dab-Thr-Dab-Xaa6-Dab-Xaa8-Leu-Dab-Dab-Glu所示的序列组成的肽或环肽,其中R1优选为正辛酰基、癸酰基、月桂酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,更优选为正辛酰基或缺失;Xaa6优选Lys或Dab,Xaa8优选D-Phe或D-Leu。The polypeptide according to any one of items 1 to 4, wherein the polypeptide is a sequence represented by R1-Dab-Thr-Dab-Xaa6-Dab-Xaa8-Leu-Dab-Dab-Glu A peptide or cyclic peptide consisting of wherein R1 is preferably n-octanoyl, decanoyl, lauroyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, more preferably n-octanoyl or a deletion; Xaa6 is preferably Lys or Dab Xaa8 is preferably D-Phe or D-Leu.
15.如项14所述的多肽或其药用盐,所述多肽是由正辛酰基-Dab-Thr-Dab-Lys-Dab-D-Phe-Leu-Dab-Dab-Glu组成的肽或环肽。The polypeptide according to item 14, or a pharmaceutically acceptable salt thereof, which is a peptide or a ring consisting of n-octanoyl-Dab-Thr-Dab-Lys-Dab-D-Phe-Leu-Dab-Dab-Glu Peptide.
16.如项15所述的多肽或其药用盐,所述多肽氨基酸序列如下:16. The polypeptide of claim 15 or a pharmaceutically acceptable salt thereof, the amino acid sequence of the polypeptide being as follows:
Figure PCTCN2018112889-appb-000019
Figure PCTCN2018112889-appb-000019
17.如项1-3所述的多肽或其药用盐,所述多肽的氨基酸序列与如下序列之一具有至少70%的序列同一性:17. The polypeptide of clause 1-3, or a pharmaceutically acceptable salt thereof, the amino acid sequence of the polypeptide having at least 70% sequence identity to one of the following sequences:
Figure PCTCN2018112889-appb-000020
Figure PCTCN2018112889-appb-000020
Figure PCTCN2018112889-appb-000021
Figure PCTCN2018112889-appb-000021
Figure PCTCN2018112889-appb-000022
Figure PCTCN2018112889-appb-000022
18.1-17任一项所述多肽或其药用盐的制备方法,包括:合成所述多肽。18. A method of producing the polypeptide of any one of 18.1, or a pharmaceutically acceptable salt thereof, comprising: synthesizing the polypeptide.
19.如项18所述的方法,包括:19. The method of clause 18, comprising:
(1)在树脂上固相合成多肽;(1) solid phase synthesis of a polypeptide on a resin;
(2)将步骤(1)的产物用强酸进行裂解;加入侧链保护基清除剂,过滤,用5-20倍体积的有机溶剂沉淀多肽,离心,有机溶剂洗涤沉淀,干燥,得到粗肽。(2) The product of the step (1) is cleaved with a strong acid; a side chain protecting group scavenger is added, filtered, and the polypeptide is precipitated with 5-20 volumes of an organic solvent, centrifuged, washed with an organic solvent, and dried to obtain a crude peptide.
20.如项19所述的方法,所述步骤(1)是在液相环境中进行的,具体包括:20. The method of item 19, wherein the step (1) is performed in a liquid phase environment, and specifically comprises:
(a)浸泡树脂—脱除氨基保护基—洗涤—监测—偶联氨基酸—监测—洗涤—脱除氨基保护基—顺序偶联剩余氨基酸;(a) soaking resin - removal of amino protecting group - washing - monitoring - coupling of amino acids - monitoring - washing - removal of amino protecting groups - sequential coupling of residual amino acids;
(b)树脂肽进一步环化。(b) The resin peptide is further cyclized.
21.如项20所述的方法,所述步骤(a)的液相环境所用溶剂选自:二甲基甲酰胺(DMF)、二氯甲烷(DCM)、N-甲基吡咯烷酮(NMP),优选DMF;所述氨基保护基选自叔丁氧羰基(Boc)、苄氧羰基(Z)或9-芴基-甲氧羰基(Fmoc),优选9-芴基-甲氧羰基(Fmoc)。21. The method of item 20, wherein the solvent used in the liquid phase environment of step (a) is selected from the group consisting of: dimethylformamide (DMF), dichloromethane (DCM), N-methylpyrrolidone (NMP), Preference is given to DMF; the amino protecting group is selected from the group consisting of tert-butoxycarbonyl (Boc), benzyloxycarbonyl (Z) or 9-fluorenyl-methoxycarbonyl (Fmoc), preferably 9-fluorenyl-methoxycarbonyl (Fmoc).
22.如项20-21任一项所述的方法,所述步骤(a)中氨基酸的偶联需要加入偶联试剂,所述偶联试剂由:碳二亚胺型试剂或者苯并三氮唑鎓盐型试剂和1-羟基苯并三唑(HOBt)组成;优选为二异丙基碳二亚胺(DIC)和1-羟基苯并三唑(HOBt),或2-(1H-苯并三偶氮L-1-基)-1,1,3,3-四甲基脲四氟硼酸酯(TBTU)和1-羟基苯并三唑(HOBt),进一步优选DIC(二异丙基碳二亚胺)和1-羟基苯并三唑(HOBt)。The method according to any one of items 20 to 21, wherein the coupling of the amino acid in the step (a) requires the addition of a coupling reagent consisting of a carbodiimide type reagent or a benzotriazine. Imidazolium salt type reagent and 1-hydroxybenzotriazole (HOBt); preferably diisopropylcarbodiimide (DIC) and 1-hydroxybenzotriazole (HOBt), or 2-(1H-benzene And trisazo-l-1-yl)-1,1,3,3-tetramethyluronium tetrafluoroborate (TBTU) and 1-hydroxybenzotriazole (HOBt), further preferably DIC (diisopropyl) Carbodiimide) and 1-hydroxybenzotriazole (HOBt).
23.如项20-22任一项所述的方法,所述步骤(b)环化氨基酸为Xaa6与Xaa12,通过其侧链氨基与羧基形成酰胺键而成环。The method according to any one of items 20 to 22, wherein the cyclized amino acid in the step (b) is Xaa6 and Xaa12, and a ring is formed by forming an amide bond between a side chain amino group and a carboxyl group.
24.如项20-23任一项所述的方法,所述步骤(b)中成环采用的是正交保护策略,成环氨基酸侧链上的氨基保护基为烯丙氧羰基(Alloc),羧基保护基为烯丙基(OAll)。The method according to any one of items 20 to 23, wherein the step (b) is carried out by orthogonal protection strategy, and the amino protecting group on the side chain of the ring-forming amino acid is allyloxycarbonyl (Alloc). The carboxy protecting group is an allyl group (OAll).
25.如项24所述的方法,所述步骤(b)包括脱氨基保护,脱去Alloc与OAll需要加入脱除剂,所述脱除剂为四(三苯基膦)钯(Pd(PPh 3) 4)。 25. The method according to item 24, wherein the step (b) comprises deamination protection, and the removal of Alloc and OAll requires the addition of a degreasing agent, which is tetrakis(triphenylphosphine)palladium (Pd(PPh) 3 ) 4 ).
26.如项25所述的方法,所述步骤(b)中还需要加入清除剂,清除剂选自H 3N·BH 3,Me 2NH·BH 3或PhSiH 3,优选PhSiH 326. The method of item 25, wherein the step (b) further requires the addition of a scavenger selected from the group consisting of H 3 N·BH 3 , Me 2 NH·BH 3 or PhSiH 3 , preferably PhSiH 3 .
27.如项20-26任一项所述的方法,所述步骤(b)中环化反应需要加入偶联试剂,所述偶联试剂由碳二亚胺型试剂或叔胺型和苯并三氮唑鎓盐型试剂或吡啶三唑翁盐型组成;优选二异丙基碳二亚胺(DIC)和1-羟基苯并三唑(HOBt),或2-(1H-苯并三偶氮L-1-基)-1,1,3,3-四甲 基脲四氟硼酸酯(TBTU)和1-羟基苯并三唑(HOBt)或N,N-二异丙基乙胺(DIEA)和2-(7-偶氮苯并三氮唑)-N,N,N',N'-四甲基脲六氟磷酸酯(HATU);进一步优选N,N-二异丙基乙胺(DIEA)和2-(7-偶氮苯并三氮唑)-N,N,N',N'-四甲基脲六氟磷酸酯(HATU)。27. The method according to any one of items 20-26, wherein the cyclization reaction in the step (b) requires the addition of a coupling reagent consisting of a carbodiimide type reagent or a tertiary amine type and a benzotriene a razoloxyl salt type reagent or a pyridine triazolium salt type; preferably diisopropylcarbodiimide (DIC) and 1-hydroxybenzotriazole (HOBt), or 2-(1H-benzotriazo) L-1-yl)-1,1,3,3-tetramethyluronium tetrafluoroborate (TBTU) and 1-hydroxybenzotriazole (HOBt) or N,N-diisopropylethylamine ( DIEA) and 2-(7-azobenzotriazole)-N,N,N',N'-tetramethyluronium hexafluorophosphate (HATU); further preferably N,N-diisopropyl B Amine (DIEA) and 2-(7-azobenzotriazole)-N,N,N',N'-tetramethyluronium hexafluorophosphate (HATU).
28.如项20-27任一项所述的方法,所述步骤(1)还包括:(c)将步骤(b)得到的树脂肽连接脂肪酸链或多元脂肪酸链。28. The method of any one of clauses 20 to 27, wherein the step (1) further comprises: (c) linking the resin peptide obtained in the step (b) to a fatty acid chain or a polybasic fatty acid chain.
29.如项28所述的方法,所述步骤(c)在DMF溶剂中偶联剂作用下发生连接反应,所述偶联剂为二异丙基碳二亚胺(DIC)和1-羟基苯并三唑(HOBt)。29. The method according to item 28, wherein the step (c) is carried out in the presence of a coupling agent in a DMF solvent, the coupling agent being diisopropylcarbodiimide (DIC) and 1-hydroxyl Benzotriazole (HOBt).
30.前述任一项权利要求所述的多肽或其药用盐的用途,其特征在于,用于抑菌、抗菌或制备抑菌、抗菌物质。30. Use of a polypeptide according to any of the preceding claims, or a pharmaceutically acceptable salt thereof, for use in bacteriostatic, antibacterial or antibacterial, antibacterial substances.
31.如项30所述的用途,所述抗菌物质为抗菌药物或抗菌剂。31. The use of claim 30, wherein the antimicrobial substance is an antibacterial or antibacterial agent.
32.如项31所述的用途,所述菌为细菌或真菌。32. The use of item 31, wherein the bacterium is a bacterium or a fungus.
33.如项32所述的用途,所述细菌或真菌是鲍曼不动杆菌(Acinetobacter baumanii),耐药鲍曼不动杆菌(drug resistant Acinetobacter baumanii),铜绿假单胞菌(Pseudomonas aeruginosa),耐药铜绿假单胞菌(drug resistant Pseudomonas aeruginosa),枯草芽孢杆菌(Bacillus subtilis),金黄色葡萄球菌(Staphylococcus aureus),大肠杆菌(E.coli),和/或白色念珠菌(candida Albicans)中的一种或几种。33. The use of claim 32, wherein the bacterium or fungus is Acinetobacter baumanii, drug resistant Acinetobacter baumanii, Pseudomonas aeruginosa, Drug resistant Pseudomonas aeruginosa, Bacillus subtilis, Staphylococcus aureus, E. coli, and/or candida Albicans One or several.
实施例一:Z18的制备与纯化Example 1: Preparation and Purification of Z18
Figure PCTCN2018112889-appb-000023
Figure PCTCN2018112889-appb-000023
(1)材料及试剂(1) Materials and reagents
Rink Amide MBHA树脂,取代值0.65mmol/g。Rink Amide MBHA resin with a substitution value of 0.65 mmol/g.
氨基酸为:Fmoc-Glu(OAll)-OH,Fmoc-Dab(Boc)-OH,Fmoc-D-Phe-OH,Fmoc-Leu-OH,Fmoc-D-Leu-OH,Fmoc-Lys(Alloc)-OH,Fmoc-Thr(tBu)-OHThe amino acids are: Fmoc-Glu(OAll)-OH, Fmoc-Dab(Boc)-OH, Fmoc-D-Phe-OH, Fmoc-Leu-OH, Fmoc-D-Leu-OH, Fmoc-Lys(Alloc)- OH, Fmoc-Thr(tBu)-OH
合成试剂:HOBt,DIC,DMF,DCM,哌啶,四(三苯基膦)钯,苯硅烷,二乙基二硫代氨基甲酸钠。Synthetic reagents: HOBt, DIC, DMF, DCM, piperidine, tetrakis(triphenylphosphine)palladium, phenylsilane, sodium diethyldithiocarbamate.
(2)仪器(2) Instrument
PSI300型多肽合成仪、Waters600半制备型高效液相色谱仪、离心机。PSI300 peptide synthesis instrument, Waters600 semi-preparative high performance liquid chromatography, centrifuge.
(3)操作步骤(以0.15mmol为例)(3) Operation steps (taking 0.15mmol as an example)
a.固相化学合成多肽a. Solid phase chemical synthesis of peptides
称取Rink Amide MBHA树脂0.23g,置于多肽合成仪反应器中,加入10mlDMF,浸泡2h,加入20%PIP/DMF溶液10ml,混合30min脱除氨基保护基,DMF洗涤树脂7次;称取 三倍量的Fmoc-Glu(OAll)-OH,DIC,HOBT加入10mlDMF溶解后,进行反应,反应温度为室温,以茚三酮反应监测反应进程,监测无色则为反应完成,用DMF洗涤树脂5次。当第一个氨基酸偶联到树脂上后,即可按照上述方法继续进行下一个氨基酸的偶联反应,如此循环,直至全部氨基酸偶联完成。向反应器中加入四(三苯基膦)钯与苯硅烷,其与树脂摩尔量之比为1:0.1:10,加入10mlDCM溶解后,在避光、N 2保护条件下反应,温度为室温,以茚三酮反应进行检测,黑紫色视为反应完成,用DCM洗涤树脂5次,再以二乙基二氨基甲酸钠/DMF洗涤树脂3次,DMF洗涤5次,向反应器中加入以10ml DMF溶解的3倍量的HATU及6倍量DIEA进行反应,反应温度为室温,以茚三酮反应监测反应进程,监测无色则视为反应完成,用DMF洗涤树脂5次。最后加入20%PIP/DMF溶液10ml,混合30min脱除最后一个氨基酸末端Fmoc保护基。 Weigh 0.23g of Rink Amide MBHA resin, put it into the peptide synthesizer reactor, add 10ml DMF, soak for 2h, add 10ml of 20% PIP/DMF solution, mix for 30min to remove amino protecting group, DMF wash resin 7 times; weigh three Amount of Fmoc-Glu(OAll)-OH, DIC, HOBT was dissolved in 10 ml of DMF, and the reaction was carried out at room temperature. The reaction progress was monitored by ninhydrin reaction, and the reaction was completed after monitoring colorlessness. The resin was washed with DMF. Times. After the first amino acid is coupled to the resin, the next amino acid coupling reaction can be continued as described above and cycled until all amino acid coupling is complete. To the reactor, tetrakis(triphenylphosphine)palladium and phenylsilane were added, and the ratio of the molar amount to the resin was 1:0.1:10. After being dissolved in 10 ml of DCM, the reaction was carried out under the protection of N 2 and the temperature was room temperature. The reaction was carried out by ninhydrin reaction, black purple was regarded as completion of the reaction, the resin was washed 5 times with DCM, the resin was washed 3 times with sodium diethyldicarboformate/DMF, 5 times with DMF, and 10 ml was added to the reactor. DMF dissolved 3 times the amount of HATU and 6 times the amount of DIEA were reacted, the reaction temperature was room temperature, the reaction progress was monitored by ninhydrin reaction, and the reaction was completed after monitoring colorless, and the resin was washed 5 times with DMF. Finally, 10 ml of 20% PIP/DMF solution was added and mixed for 30 min to remove the last amino acid terminal Fmoc protecting group.
b.裂解及沉淀b. Cracking and precipitation
肽合成结束后,真空干燥树脂,称重。按照1ml裂解试剂/100mg树脂的比例加入裂解试剂,试剂配比为TFA:茴香硫醚:75%苯酚:水=85:5:5:5(V:V:V:V),室温搅拌反应3小时,抽滤。向裂解抽滤液中加入10倍体积的冰乙醚沉淀多肽,离心,弃上清后,以冰乙醚反复洗涤沉淀4~5次,真空干燥,称重粗肽。After the peptide synthesis was completed, the resin was dried under vacuum and weighed. The lysis reagent was added in a ratio of 1 ml of the lysis reagent/100 mg of the resin, and the reagent ratio was TFA: thioanisole: 75% phenol: water = 85:5:5:5 (V: V: V: V), and the reaction was stirred at room temperature. Hours, suction filtration. The peptide was precipitated by adding 10 volumes of ice diethyl ether to the lysate, centrifuged, and the supernatant was discarded, and the precipitate was repeatedly washed with ice diethyl ether for 4 to 5 times, dried in vacuo, and the crude peptide was weighed.
c.分离纯化c. separation and purification
用半制备型RP-HPLC,对粗肽进行纯化。The crude peptide was purified by semi-preparative RP-HPLC.
1.纯化Purification
色谱柱:YMC-pack ODS-AQ C18制备柱(10mm×250mm,10μm)Column: YMC-pack ODS-AQ C18 preparative column (10mm × 250mm, 10μm)
流速:5ml/minFlow rate: 5ml/min
检测波长:215nmDetection wavelength: 215nm
流动相:A相:0.1%TFA/水溶液Mobile phase: Phase A: 0.1% TFA/water solution
B相:0.1%TFA/乙腈Phase B: 0.1% TFA / acetonitrile
梯度洗脱程序如表3:The gradient elution procedure is shown in Table 3:
表3梯度洗脱表Table 3 gradient elution table
Figure PCTCN2018112889-appb-000024
Figure PCTCN2018112889-appb-000024
2.分析方法2. Analysis method
色谱柱:YMC-pack ODS-AQ C18分析柱(4.6mm×250mm,5μm)Column: YMC-pack ODS-AQ C18 analytical column (4.6mm × 250mm, 5μm)
流速:1ml/minFlow rate: 1ml/min
检测波长:215nmDetection wavelength: 215nm
流动相:A相:0.05%TFA/水Mobile phase: Phase A: 0.05% TFA / water
B相:0.05%TFA/乙腈Phase B: 0.05% TFA / acetonitrile
梯度洗脱程序如表4:The gradient elution procedure is shown in Table 4:
表4梯度洗脱表Table 4 gradient elution table
Figure PCTCN2018112889-appb-000025
Figure PCTCN2018112889-appb-000025
收集纯度大于95%的目标组分,低压旋蒸,冷冻干燥。经ESI-MS进行分子量确证,m/z=1232.05(M+H) +与理论分子量为1231.32相符。 The target component with a purity greater than 95% was collected, steamed under low pressure, and lyophilized. Molecular weight confirmation by ESI-MS, m/z=1232.05 (M+H) + is consistent with the theoretical molecular weight of 1231.32.
实施例二:Z29的制备与纯化Example 2: Preparation and purification of Z29
氨基酸序列:
Figure PCTCN2018112889-appb-000026
Amino acid sequence:
Figure PCTCN2018112889-appb-000026
(1)材料及试剂(1) Materials and reagents
Rink Amide MBHA树脂,取代值0.65mmol/g。Rink Amide MBHA resin with a substitution value of 0.65 mmol/g.
氨基酸为:Fmoc-Glu(OAll)-OH,Fmoc-Dab(Boc)-OH,Fmoc-D-Phe-OH,Fmoc-Leu-OH,Fmoc-D-Leu-OH,Fmoc-Lys(Alloc)-OH,Fmoc-Thr(tBu)-OHThe amino acids are: Fmoc-Glu(OAll)-OH, Fmoc-Dab(Boc)-OH, Fmoc-D-Phe-OH, Fmoc-Leu-OH, Fmoc-D-Leu-OH, Fmoc-Lys(Alloc)- OH, Fmoc-Thr(tBu)-OH
合成试剂:HOBt,DIC,DMF,DCM,哌啶,四(三苯基膦)钯,苯硅烷,二乙基二硫代氨基甲酸钠,正辛酸。Synthetic reagents: HOBt, DIC, DMF, DCM, piperidine, tetrakis(triphenylphosphine)palladium, phenylsilane, sodium diethyldithiocarbamate, n-octanoic acid.
(2)仪器(2) Instrument
PSI300型多肽合成仪、Waters600半制备型高效液相色谱仪、离心机。PSI300 peptide synthesis instrument, Waters600 semi-preparative high performance liquid chromatography, centrifuge.
(3)操作步骤(以0.15mmol为例)(3) Operation steps (taking 0.15mmol as an example)
a.固相化学合成多肽a. Solid phase chemical synthesis of peptides
称取Rink Amide MBHA树脂0.23g,置于多肽合成仪反应器中,加入10mlDMF,浸泡2h,加入20%PIP/DMF溶液10ml,混合30min脱除氨基保护基,DMF洗涤树脂7次;称取 三倍量的Fmoc-Glu(OAll)-OH,DIC,HOBT加入10mlDMF溶解后,进行反应,反应温度为室温,以茚三酮反应监测反应进程,监测无色则为反应完成,用DMF洗涤树脂5次。当第一个氨基酸偶联到树脂上后,即可按照上述方法继续进行下一个氨基酸的偶联反应,如此循环,直至全部氨基酸偶联完成。向反应器中加入四(三苯基膦)钯与苯硅烷,其与树脂摩尔量之比为1:0.1:10,加入10ml DCM溶解后,在避光,N 2保护条件下反应,温度为室温,以茚三酮反应进行检测,黑紫色视为反应完成,用DCM洗涤树脂5次,再以二乙基二氨基甲酸钠/DMF洗涤树脂3次,DMF洗涤5次,向反应器中加入以10ml DMF溶解的3倍量的HATU及6倍量DIEA进行反应,反应温度为室温,以茚三酮反应监测反应进程,监测无色则视为反应完成,用DMF洗涤树脂5次。最后加入20%PIP/DMF溶液10ml,混合30min脱除最后一个氨基酸末端Fmoc保护基。称取三倍量的正辛酸,DIC,HOBT加入10mlDMF溶解后,进行反应,反应温度为室温,以茚三酮反应监测反应进程,监测无色则为反应完成,用DMF洗涤树脂5次。 Weigh 0.23g of Rink Amide MBHA resin, put it into the peptide synthesizer reactor, add 10ml DMF, soak for 2h, add 10ml of 20% PIP/DMF solution, mix for 30min to remove amino protecting group, DMF wash resin 7 times; weigh three Amount of Fmoc-Glu(OAll)-OH, DIC, HOBT was dissolved in 10 ml of DMF, and the reaction was carried out at room temperature. The reaction progress was monitored by ninhydrin reaction, and the reaction was completed after monitoring colorlessness. The resin was washed with DMF. Times. After the first amino acid is coupled to the resin, the next amino acid coupling reaction can be continued as described above and cycled until all amino acid coupling is complete. To the reactor, tetrakis(triphenylphosphine)palladium and benzenesilane were added, and the ratio of the molar amount to the resin was 1:0.1:10. After adding 10 ml of DCM, the solution was dissolved in the dark and protected under N 2 at a temperature of At room temperature, the reaction was carried out by ninhydrin reaction, black purple was regarded as completion of the reaction, the resin was washed 5 times with DCM, the resin was washed 3 times with sodium diethyldicarboformate/DMF, 5 times with DMF, and added to the reactor. 10 ml of DMF dissolved 3 times the amount of HATU and 6 times the amount of DIEA were reacted, the reaction temperature was room temperature, the reaction progress was monitored by ninhydrin reaction, and the reaction was completed after monitoring colorless, and the resin was washed 5 times with DMF. Finally, 10 ml of 20% PIP/DMF solution was added and mixed for 30 min to remove the last amino acid terminal Fmoc protecting group. Three times the amount of n-octanoic acid was weighed, and DIC and HOBT were dissolved in 10 ml of DMF, and the reaction was carried out at room temperature. The reaction progress was monitored by ninhydrin reaction, and the reaction was completed after monitoring colorlessness, and the resin was washed 5 times with DMF.
b.裂解及沉淀b. Cracking and precipitation
肽合成结束后,真空干燥树脂,称重。按照1ml裂解试剂/100mg树脂的比例加入裂解试剂,试剂配比为TFA:茴香硫醚:75%苯酚:水=85:5:5:5(V:V:V:V),室温搅拌反应3小时,抽滤。向裂解抽滤液中加入10倍体积的冰乙醚沉淀多肽,离心,弃上清后,以冰乙醚反复洗涤沉淀4~5次,真空干燥,称重粗肽。After the peptide synthesis was completed, the resin was dried under vacuum and weighed. The lysis reagent was added in a ratio of 1 ml of the lysis reagent/100 mg of the resin, and the reagent ratio was TFA: thioanisole: 75% phenol: water = 85:5:5:5 (V: V: V: V), and the reaction was stirred at room temperature. Hours, suction filtration. The peptide was precipitated by adding 10 volumes of ice diethyl ether to the lysate, centrifuged, and the supernatant was discarded, and the precipitate was repeatedly washed with ice diethyl ether for 4 to 5 times, dried in vacuo, and the crude peptide was weighed.
c.分离纯化c. separation and purification
用半制备型RP-HPLC,对粗肽进行纯化。The crude peptide was purified by semi-preparative RP-HPLC.
1.纯化Purification
色谱柱:YMC-pack ODS-AQ C18制备柱(10mm×250mm,10μm)Column: YMC-pack ODS-AQ C18 preparative column (10mm × 250mm, 10μm)
流速:5ml/minFlow rate: 5ml/min
检测波长:215nmDetection wavelength: 215nm
流动相:A相:0.1%TFA/水溶液Mobile phase: Phase A: 0.1% TFA/water solution
B相:0.1%TFA/乙腈Phase B: 0.1% TFA / acetonitrile
梯度洗脱程序如表5:The gradient elution procedure is shown in Table 5:
表5梯度洗脱表Table 5 gradient elution table
Figure PCTCN2018112889-appb-000027
Figure PCTCN2018112889-appb-000027
Figure PCTCN2018112889-appb-000028
Figure PCTCN2018112889-appb-000028
2.分析方法2. Analysis method
色谱柱:YMC-pack ODS-AQ C18分析柱(4.6mm×250mm,5μm)Column: YMC-pack ODS-AQ C18 analytical column (4.6mm × 250mm, 5μm)
流速:1ml/minFlow rate: 1ml/min
检测波长:215nmDetection wavelength: 215nm
流动相:A相:0.05%TFA/水Mobile phase: Phase A: 0.05% TFA / water
B相:0.05%TFA/乙腈Phase B: 0.05% TFA / acetonitrile
梯度洗脱程序如表6:The gradient elution procedure is shown in Table 6:
表6梯度洗脱表Table 6 gradient elution table
Figure PCTCN2018112889-appb-000029
Figure PCTCN2018112889-appb-000029
收集纯度大于95%的目标组分,低压旋蒸,冷冻干燥。经ESI-MS进行分子量确证,m/z=606.25(M+2H) 2+与理论分子量1210.34相符。 The target component with a purity greater than 95% was collected, steamed under low pressure, and lyophilized. Molecular weight confirmation by ESI-MS, m/z = 606.25 (M+2H) 2+ is consistent with the theoretical molecular weight of 1210.34.
实施例三:表7中其余CAMP系列抗菌肽的制备及纯化Example 3: Preparation and purification of the remaining CAMP series antimicrobial peptides in Table 7
(1)材料及试剂(1) Materials and reagents
Rink Amide MBHA树脂,取代值0.65mmol/g。Rink Amide MBHA resin with a substitution value of 0.65 mmol/g.
氨基酸为:Fmoc-Glu(OAll)-OH,Fmoc-Asp(OAll)-OH,Fmoc-Dab(Boc)-OH,Fmoc-Leu-OH,Fmoc-D-Leu-OH,Fmoc-D-Phe-OH,Fmoc-Lys(Alloc)-OH,Fmoc-Thr(tBu)-OH,Fmoc-Phe-OH,Fmoc-Orn(Boc)-OH,Fmoc-Arg(Pbf)-OH,Fmoc-Phe(4-CF 3)-OH,Fmoc-Phe(4-Br)-OH,Fmoc-Phe(4-I)-OH,Fmoc-Ala-OH,Fmoc-D-Ala-OH,Fmoc-AEEA-OH, The amino acids are: Fmoc-Glu(OAll)-OH, Fmoc-Asp(OAll)-OH, Fmoc-Dab(Boc)-OH, Fmoc-Leu-OH, Fmoc-D-Leu-OH, Fmoc-D-Phe- OH, Fmoc-Lys(Alloc)-OH, Fmoc-Thr(tBu)-OH, Fmoc-Phe-OH, Fmoc-Orn(Boc)-OH, Fmoc-Arg(Pbf)-OH, Fmoc-Phe(4- CF 3 )-OH, Fmoc-Phe(4-Br)-OH, Fmoc-Phe(4-I)-OH, Fmoc-Ala-OH, Fmoc-D-Ala-OH, Fmoc-AEEA-OH,
试剂:HOBt,DIC,DMF,哌啶,正辛酸,癸酸,月桂酸,棕榈酸,十八烷二酸叔丁基单酯。Reagents: HOBt, DIC, DMF, piperidine, n-octanoic acid, citric acid, lauric acid, palmitic acid, t-butyl monodecanoate.
(2)仪器(2) Instrument
PSI300型多肽合成仪、Waters600半制备型高效液相色谱仪、Q-Tof MicroYA019型质谱仪,磁力搅拌器。PSI300 peptide synthesizer, Waters600 semi-preparative high performance liquid chromatography, Q-Tof MicroYA019 mass spectrometer, magnetic stirrer.
(3)操作步骤(以0.15mmol为例)(3) Operation steps (taking 0.15mmol as an example)
以类似实施例1中操作步骤a-c的方法制备及纯化表7中的多肽,若为带脂肪链多肽则按照实施例2中的操作步骤a-c进行制备,收集纯度大于95%的部分,旋蒸,冷冻干燥。ESI-MS测定值如表7所示。The polypeptide in Table 7 was prepared and purified in a manner similar to the procedure of ac in Example 1, and if it was a fatty chain polypeptide, it was prepared according to the procedure ac in Example 2, and the fraction having a purity greater than 95% was collected, and steamed, Freeze-dried. The measured values of ESI-MS are shown in Table 7.
表7多黏菌素类似物及其分子量Table 7 polymyxin analogs and their molecular weight
Figure PCTCN2018112889-appb-000030
Figure PCTCN2018112889-appb-000030
Figure PCTCN2018112889-appb-000031
Figure PCTCN2018112889-appb-000031
实施例四:体外抗菌活性测定Example 4: Determination of in vitro antibacterial activity
根据美国临床实验室标准化委员会(NCCLS)推荐的微量肉汤稀释法测定各抗菌肽的最低抑菌浓度(MIC),细菌培养基采用Mueller-Hinton(MH)肉汤培养基,白色念球菌培养基采用Hyclone改良型RPMI-1640培养基。The minimum inhibitory concentration (MIC) of each antimicrobial peptide was determined according to the micro-broth dilution method recommended by the American Committee for Clinical Laboratory Standards (NCCLS). The bacterial culture medium was Mueller-Hinton (MH) broth medium, Candida albicans medium. Hyclone modified RPMI-1640 medium was used.
具体步骤为:The specific steps are:
(1)抗菌药物贮存液制备:(1) Preparation of antibacterial drug stock solution:
精确配制浓度为320μg/ml的上述抗菌肽和80μg/ml阳性对照品两性霉素B、硫酸多黏菌素E及盐酸万古霉素。配制好的各贮存液置于-20℃环境中保存备用。The above antimicrobial peptide at a concentration of 320 μg/ml and 80 μg/ml positive control amphotericin B, polymyxin E sulfate and vancomycin hydrochloride were precisely prepared. The prepared stock solutions were stored in an environment of -20 ° C for use.
(2)培养基的配制:(2) Preparation of the medium:
称取MH肉汤培养基21g,溶于蒸馏水中并定容至1L,121℃高温灭菌30min。21 g of MH broth medium was weighed, dissolved in distilled water and made up to 1 L, and sterilized at 121 ° C for 30 min.
(3)接种物的制备:(3) Preparation of inoculum:
用接种环挑取形态相似待检菌落3~5个,接种于4~5ml的MH肉汤中,35℃孵育12~16h。处于对数生长期得到菌液用MH肉汤校正浓度至0.5麦氏比浊标准,约含1~2×10 8CFU/ml。用MH肉汤将上述菌悬液进行1:1000稀释后备用。 Use the inoculating loop to pick 3 to 5 colonies of similar morphology to be inoculated, inoculate them in 4 to 5 ml of MH broth, and incubate at 35 ° C for 12 to 16 h. In the logarithmic growth phase, the bacterial liquid was corrected to a MH turbidity standard with MH broth, and contained about 1 to 2 × 10 8 CFU/ml. The above bacterial suspension was diluted 1:1000 with MH broth and set aside.
(4)稀释抗菌药物的制备及菌液接种:(4) Preparation of diluted antibacterial drugs and bacterial inoculation:
取一块96孔板,在第1孔中加入160μL MH肉汤,第2-12孔中各加入100μL MH肉汤,然后向第1孔加入抗菌药物原液(320μg/ml)40μL,混匀,接着吸取100μL至第2孔,混匀后再从第2孔中吸取100μL至第3孔,如此连续倍比稀释至第10孔,并从第10孔中吸取100μL弃去,然后向第1-10孔及第12孔中加入上述制备好的接种物各100μL,使每孔最终菌液浓度约为0.5×10 5CFU/ml。第1-10孔药物浓度分别为32μg/ml、16μg/ml、8μg/ml、4μg/ml、2μg/ml、1μg/ml、0.5μg/ml、0.25μg/ml、0.125μg/ml、0.0625μg/ml,第11孔为不含抗菌药物及接种物的空白对照,第12孔为不含抗菌药物的阴性对照。 Take a 96-well plate, add 160 μL of MH broth to the first well, add 100 μL of MH broth to each of the 2-12 wells, then add 40 μL of the antibacterial drug solution (320 μg/ml) to the first well, and mix. Pipette 100 μL to the second well, mix and then take 100 μL to the third well from the second well, so as to serially dilute to the 10th well, and take 100 μL from the 10 well to discard, then to the 1-10 100 μL of each of the prepared inoculum was added to the wells and the 12th well, so that the final bacterial concentration per well was about 0.5 × 10 5 CFU/ml. The drug concentrations in the first 1-10 well were 32 μg/ml, 16 μg/ml, 8 μg/ml, 4 μg/ml, 2 μg/ml, 1 μg/ml, 0.5 μg/ml, 0.25 μg/ml, 0.125 μg/ml, and 0.0625 μg, respectively. /ml, the 11th hole is a blank control without antibacterial drugs and inoculum, and the 12th hole is a negative control without antibacterial drugs.
(5)孵育(5) Incubation
接种细菌的96孔板置于35℃普通空气孵箱中孵育16~20h,接种真菌的96孔板置于28℃空气孵箱中孵育40~50h。The 96-well plates inoculated with bacteria were incubated in a normal air incubator at 35 ° C for 16-20 h, and the 96-well plates inoculated with fungi were incubated in a 28 ° C air incubator for 40-50 h.
(6)结果(6) Results
以肉眼观察,无细菌生长的最低药物浓度即为该样品的最低抑菌浓度(MIC)。各抗菌肽的MIC测定结果如表8所示。The lowest drug concentration without bacterial growth was observed by the naked eye as the minimum inhibitory concentration (MIC) of the sample. The MIC measurement results of the respective antimicrobial peptides are shown in Table 8.
根据本发明所公开的内容,在此所公开并要求保护的所有组合物和/或方法均无需进行过多实验即可进行制备和实施。虽然根据优选实施方案对本发明的组合物和方法进行了描述,但对本领域技术人员而言,在不背离本发明的概念、精神和范围的情况下,可对在此所述的组合物和/或方法以及所述方法的步骤或步骤的顺序进行改变。All of the compositions and/or methods disclosed and claimed herein can be prepared and carried out without undue experimentation in light of the present disclosure. While the compositions and methods of the present invention are described in accordance with the preferred embodiments, the compositions and/or compositions described herein may be practiced without departing from the spirit, scope and scope of the invention. Or the method and the order of the steps or steps of the method are changed.
本文所引用的所有文献的公开内容通过引用结合于此,引用程度为,他们提供示例性的、程序上和其他的细节补充本文所述内容。The disclosures of all of the documents cited herein are hereby incorporated by reference in their entirety to the extent of the extent of the disclosure of the disclosure of the disclosure of the disclosure.
表8多黏菌素类似物MIC结果Table 8 MIC results of polymyxin analogs
Figure PCTCN2018112889-appb-000032
Figure PCTCN2018112889-appb-000032
Figure PCTCN2018112889-appb-000033
Figure PCTCN2018112889-appb-000033
实施例五:半数致死量测定Example 5: Determination of the median lethal dose
半数致死量(Median Lethal Dose),简称LD50,是指能杀死一半试验对象的有害物质或辐射的接触剂量,是描述有害物质或辐射的毒性的常用参数。LD50通常以有害物质的质量和试验生物体重之比表征,可以用来比较不同物质的相对毒性。Median Lethal Dose (LD50) refers to the exposure dose of harmful substances or radiation that can kill half of the test subjects. It is a common parameter for describing the toxicity of harmful substances or radiation. LD50 is usually characterized by the ratio of the mass of the hazardous substance to the weight of the test organism and can be used to compare the relative toxicity of different substances.
具体步骤为:The specific steps are:
(1)实验动物选择与培养(1) Selection and culture of experimental animals
ICR小鼠,雄性,体重20-22g,来自上海西普尔-必凯实验动物有限公司。小鼠分笼饲养于20±2℃明暗各12小时的动物实验室内,实验动物自由饮水和进食。按体重随机分组。ICR mice, male, weighing 20-22 g, were from Shanghai Xipuer-Beikai Experimental Animal Co., Ltd. The mice were housed in an animal laboratory at 20 ± 2 ° C for 12 hours, and the experimental animals were given free access to water and food. Randomly grouped by weight.
(2)受试物的制备(2) Preparation of test substance
准确称量CTAMP43、ZAMP18及多黏菌素E,加氯化钠注射液配制成含样品10mg/ml的溶液,-20℃冷藏备用。Accurately weigh CTAMP43, ZAMP18 and polymyxin E, add sodium chloride injection to prepare a solution containing 10mg/ml of sample, and chill at -20 °C for use.
(3)给药途径及给药容积(3) Route of administration and volume of administration
按照受试药物推荐的临床研究的给药途径,采用静脉给药,给药体积10ml/kg。According to the route of administration of the clinical study recommended by the test drug, intravenous administration was carried out at a dose of 10 ml/kg.
(4)实验方法(4) Experimental method
实验前先用少量小鼠进行预实验,测出该受试物引起0%和100%死亡率的致死剂量范围后,再进行正式试验。正式试验组数为5个剂量组,每组动物数10只。Before the experiment, a small number of mice were used for pre-experiment, and the lethal dose range of 0% and 100% mortality of the test substance was measured, and then the formal test was conducted. The number of formal test groups was 5 dose groups, and the number of animals in each group was 10.
(5)预实验(5) Pre-experiment
取一只小鼠,静脉注射给予受试样品5mg/kg(给药体积0.2ml)。20s左右完成注射,若动物没有死亡,则另取一只小鼠,给予更高剂量。若动物死亡或出现濒死状态另取一只,给予更低剂量。动物存活的剂量将数量补足至3只,观察动物的存活状态。找到0%和100%死亡剂量。One mouse was administered, and the test sample was administered intravenously at 5 mg/kg (administered volume 0.2 ml). The injection is completed in about 20s. If the animal does not die, another mouse is taken and a higher dose is given. If the animal dies or is in a state of sudden death, take another one and give a lower dose. The dose of animal survival was supplemented to 3, and the survival state of the animals was observed. Find 0% and 100% death doses.
(6)正式试验(6) Formal test
在0%及100%致死剂量范围内,设定组间剂量比,组数为5组,每组动物数为10只。观察并记录给药后动物的即时反应。监测体重变化,记录给药后动物状态。若出现动物死亡,应进行记录,至给药后7天结束实验,并处死所有动物。根据实验结果,求出LD50。In the range of 0% and 100% lethal doses, the inter-group dose ratio was set, and the number of groups was 5, and the number of animals in each group was 10. The immediate response of the animals after administration was observed and recorded. Body weight changes were monitored and the status of the animals after administration was recorded. If an animal dies, it should be recorded, and the experiment is terminated 7 days after administration, and all animals are sacrificed. Based on the experimental results, the LD50 was determined.
(7)结果(7) Results
本试验对活性较强的CTAMP43、ZAMP18的LD50进行测定,并与硫酸多黏菌素E对比,试验结果如下表9。结果显示CTAMP43与ZAMP18的LD50分别为34.6mg/kg、35.0mg/kg,而硫酸多黏菌素E的LD50为9.3-10mg/ml,这说明CTAMP43与ZAMP18的毒性比多黏菌素E低3-4倍。In this test, the LD50 of CTAMP43 and ZAMP18 with high activity was measured and compared with polymyxin E sulfate. The test results are shown in Table 9 below. The results showed that the LD50 of CTAMP43 and ZAMP18 were 34.6 mg/kg and 35.0 mg/kg, respectively, while the LD50 of polymyxin E was 9.3-10 mg/ml, indicating that CTAMP43 and ZAMP18 were less toxic than polymyxin E. -4 times.
表9半数致死量测定结果Table 9 Half lethal dose measurement results
Figure PCTCN2018112889-appb-000034
Figure PCTCN2018112889-appb-000034
根据本发明所公开的内容,虽然根据优选实施方案对本发明的组合物和方法进行了描述,但对本领域技术人员而言,在不背离本发明的概念、精神和范围的情况下,可对在此所述的组合物和/或方法以及所述方法的步骤或步骤的顺序进行改变。In view of the present disclosure, while the compositions and methods of the present invention have been described in accordance with the preferred embodiments, those skilled in the art may, without departing from the concept, the spirit and the scope of the present invention, The compositions and/or methods described herein, as well as the order of the steps or steps of the methods, are varied.
本文所引用的所有文献的公开内容通过引用结合于此,引用程度为,他们提供示例性的、程序上和其他的细节补充本文所述内容。The disclosures of all of the documents cited herein are hereby incorporated by reference in their entirety to the extent of the extent of the disclosure of the disclosure of the disclosure of the disclosure.

Claims (15)

  1. 一种多肽或其药用盐,所述多肽与式I所示的序列具有至少70%的序列同一性:A polypeptide or a pharmaceutically acceptable salt thereof, which polypeptide has at least 70% sequence identity to the sequence of Formula I:
    R1-Xaa1-Xaa2-Xaa3-Xaa4-Xaa5-Xaa6-Xaa7-Xaa8-Xaa9-Xaa10-Xaa11-Xaa12(式I),R1-Xaa1-Xaa2-Xaa3-Xaa4-Xaa5-Xaa6-Xaa7-Xaa8-Xaa9-Xaa10-Xaa11-Xaa12 (Formula I),
    其中,R1为:脂肪族直链或支链C 6-C 20的酰基基团或缺失; Wherein R1 is: an aliphatic straight-chain or branched C 6 -C 20 acyl group or a deletion;
    Xaa1为:Leu,Ala,AEEAc,Phe,IPhe,BrPhe,3FPhe或缺失;Xaa1 is: Leu, Ala, AEEAc, Phe, IPhe, BrPhe, 3FPhe or deletion;
    Xaa2为:Leu,Ala,Arg,AEEAc或缺失;Xaa2 is: Leu, Ala, Arg, AEEAc or deletion;
    Xaa3为:Dab,Ala,Leu,Orn或缺失;Xaa3 is: Dab, Ala, Leu, Orn or missing;
    Xaa4为:Thr,Ala,Dab或Lys;Xaa4 is: Thr, Ala, Dab or Lys;
    Xaa5为:Dab,Lys,Orn,Ala或缺失;Xaa5 is: Dab, Lys, Orn, Ala or missing;
    Xaa6为:Lys,Glu或Dab;Xaa6 is: Lys, Glu or Dab;
    Xaa7为:Dab,Ala,Lys,Orn或缺失;Xaa7 is: Dab, Ala, Lys, Orn or missing;
    Xaa8为:D-Leu,D-Phe,Lys或D-Ala;Xaa8 is: D-Leu, D-Phe, Lys or D-Ala;
    Xaa9为:Leu或Ala;Xaa9 is: Leu or Ala;
    Xaa10为:Dab,Leu,Orn,Ala,D-Leu或缺失;Xaa10 is: Dab, Leu, Orn, Ala, D-Leu or deletion;
    Xaa11为:Dab,Leu,Orn,Ala,D-Leu或缺失;Xaa11 is: Dab, Leu, Orn, Ala, D-Leu or deletion;
    Xaa12为:Glu,Lys或Asp。Xaa12 is: Glu, Lys or Asp.
  2. 如权利要求1所述的多肽或其药用盐,其中所述多肽为环肽。The polypeptide of claim 1 or a pharmaceutically acceptable salt thereof, wherein the polypeptide is a cyclic peptide.
  3. 如权利要求1-2任一项所述的多肽或其药用盐,所述多肽由Xaa6与Xaa12的侧链基团脱水缩合成酰胺键而成环,可选地,所述侧链基团含有氨基和/或羧基。A polypeptide according to any one of claims 1 to 2, or a pharmaceutically acceptable salt thereof, which is obtained by dehydration of Xaa6 and a side chain group of Xaa12 to form an amide bond, optionally, the side chain group Contains amino and/or carboxyl groups.
  4. 如权利要求1-3任一项所述的多肽或其药用盐,所述R1选自庚酰基、甲基庚酰基、辛酰基、甲基辛酰基、壬酰基、甲基壬酰基、癸酰基、甲基癸酰基、月桂酰基、肉豆蔻酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,优选为正辛酰基、癸酰基、月桂酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,更优选为正辛酰基或缺失;Xaa1优选Leu或缺失,Xaa2优选Leu,Xaa3优选Dab,Xaa4优选Thr,Xaa5优选Dab,Xaa6优选Lys或Dab,Xaa7优选Dab,Xaa8优选D-Phe或D-Leu,Xaa9优选Leu,Xaa10优选Dab,Xaa11优选Dab,和/或Xaa12优选Glu。The polypeptide according to any one of claims 1 to 3, wherein R1 is selected from the group consisting of heptanoyl, methylheptanoyl, octanoyl, methyloctanoyl, decanoyl, methyldecanoyl, decanoyl , methyl decanoyl, lauroyl, myristoyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, preferably n-octanoyl, decanoyl, lauroyl, palmitoyl, 17-carboxylic acid - seventeen Alkanoyl group or deletion, more preferably n-octanoyl or deletion; Xaa1 is preferably Leu or deleted, Xaa2 is preferably Leu, Xaa3 is preferably Dab, Xaa4 is preferably Dab, Xaa4 is preferably Thr, Xaa5 is preferably Dab, Xaa6 is preferably Lys or Dab, Xaa7 is preferably Dab, Xaa8 is preferably D- Phe or D-Leu, Xaa9 is preferably Leu, Xaa10 is preferably Dab, Xaa11 is preferably Dab, and/or Xaa12 is preferably Glu.
  5. 如权利要求1-3任一项所述的多肽或其药用盐,所述多肽具有如下通式:R1-Xaa1-Xaa2-Xaa3-Xaa4-Xaa5-Lys-Xaa7-Xaa8-Xaa9-Xaa10-Xaa11-Glu,The polypeptide or a pharmaceutically acceptable salt thereof according to any one of claims 1 to 3, which has the general formula: R1-Xaa1-Xaa2-Xaa3-Xaa4-Xaa5-Lys-Xaa7-Xaa8-Xaa9-Xaa10-Xaa11 -Glu,
    其中,R1为:脂肪族直链或支链C 6-C 20的酰基基团或缺失; Wherein R1 is: an aliphatic straight-chain or branched C 6 -C 20 acyl group or a deletion;
    Xaa1为:Leu,Ala,AEEAc,Phe,IPhe,BrPhe,3FPhe或缺失;Xaa1 is: Leu, Ala, AEEAc, Phe, IPhe, BrPhe, 3FPhe or deletion;
    Xaa2为:Leu,Ala,Arg,AEEAc或缺失;Xaa2 is: Leu, Ala, Arg, AEEAc or deletion;
    Xaa3为:Dab,Ala,Leu,Orn或缺失;Xaa3 is: Dab, Ala, Leu, Orn or missing;
    Xaa4为:Thr,Ala,Dab或Lys;Xaa4 is: Thr, Ala, Dab or Lys;
    Xaa5为:Dab,Lys,Orn,Ala或缺失;Xaa5 is: Dab, Lys, Orn, Ala or missing;
    Xaa7为:Dab,Ala,Lys,Orn或缺失;Xaa7 is: Dab, Ala, Lys, Orn or missing;
    Xaa8为:D-Leu,D-Phe,Lys或D-Ala;Xaa8 is: D-Leu, D-Phe, Lys or D-Ala;
    Xaa9为:Leu或Ala;Xaa9 is: Leu or Ala;
    Xaa10为:Dab,Leu,Orn,Ala,D-Leu或缺失;Xaa10 is: Dab, Leu, Orn, Ala, D-Leu or deletion;
    Xaa11为:Dab,Leu,Orn,Ala,D-Leu或缺失。Xaa11 is: Dab, Leu, Orn, Ala, D-Leu or deletion.
  6. 如权利要求5所述的多肽或其药用盐,所述R1选自庚酰基、甲基庚酰基、辛酰基、甲基辛酰基、壬酰基、甲基壬酰基、癸酰基、甲基癸酰基、月桂酰基、肉豆蔻酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,优选为正辛酰基、癸酰基、月桂酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,更优选为正辛酰基或缺失;Xaa1优选Leu或缺失,Xaa2优选Leu,Xaa3优选Dab,Xaa4优选Thr,Xaa5优选Dab,Xaa7优选Dab,Xaa8优选D-Phe或D-Leu,Xaa9优选Leu,Xaa10优选Dab,Xaa11优选Dab。The polypeptide according to claim 5 or a pharmaceutically acceptable salt thereof, wherein R1 is selected from the group consisting of heptanoyl, methylheptanoyl, octanoyl, methyloctanoyl, decanoyl, methyldecanoyl, decanoyl, methyldecanoyl , lauroyl, myristoyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, preferably n-octanoyl, decanoyl, lauroyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, More preferably, it is n-octanoyl or a deletion; Xaa1 is preferably Leu or a deletion, Xaa2 is preferably Leu, Xaa3 is preferably Dab, Xaa3 is preferably Dab, Xaa4 is preferably Thr, Xaa5 is preferably Dab, Xaa7 is preferably Dab, Xaa8 is preferably D-Phe or D-Leu, Xaa9 is preferably Leu, Xaa10 Preferably, Dab, Xaa11 is preferably Dab.
  7. 如权利要求1-4任一项所述的多肽或其药用盐,所述多肽是由R1-Leu-Dab-Thr-Dab-Xaa6-Dab-Xaa8-Leu-Dab-Dab-Glu所示的序列组成的肽或环肽,其中R1优选为正辛酰基、癸酰基、月桂酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,更优选为正辛酰基或缺失;Xaa6优选Lys或Dab,Xaa8优选D-Phe或D-Leu。The polypeptide of any one of claims 1 to 4, or a pharmaceutically acceptable salt thereof, which is represented by R1-Leu-Dab-Thr-Dab-Xaa6-Dab-Xaa8-Leu-Dab-Dab-Glu A peptide or cyclic peptide consisting of a sequence, wherein R1 is preferably n-octanoyl, decanoyl, lauroyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, more preferably n-octanoyl or a deletion; Xaa6 is preferably Lys or Dab, Xaa8 is preferably D-Phe or D-Leu.
  8. 如权利要求7所述的多肽或其药用盐,所述多肽是由H 2N-Leu-Dab-Thr-Dab-Lys-Dab-D-Phe-Leu-Dab-Dab-Glu组成的肽或环肽。 The polypeptide according to claim 7 or a pharmaceutically acceptable salt thereof, which is a peptide consisting of H 2 N-Leu-Dab-Thr-Dab-Lys-Dab-D-Phe-Leu-Dab-Dab-Glu or Cyclic peptide.
  9. 如权利要求8所述的多肽或其药用盐,所述多肽氨基酸序列如下:The polypeptide of claim 8 or a pharmaceutically acceptable salt thereof, the amino acid sequence of the polypeptide being as follows:
    Figure PCTCN2018112889-appb-100001
    Figure PCTCN2018112889-appb-100001
  10. 如权利要求1-4任一项所述的多肽或其药用盐,所述多肽是由R1-Dab-Thr-Dab-Xaa6-Dab-Xaa8-Leu-Dab-Dab-Glu所示的序列组成的肽或环肽,其中R1优选为正辛酰基、癸酰基、月桂酰基、棕榈酰基、17-羧酸-十七烷酰基或缺失,更优选为正辛酰基或缺失;Xaa6优选Lys或Dab,Xaa8优选D-Phe或D-Leu。The polypeptide of any one of claims 1 to 4, or a pharmaceutically acceptable salt thereof, which comprises a sequence represented by R1-Dab-Thr-Dab-Xaa6-Dab-Xaa8-Leu-Dab-Dab-Glu Peptide or cyclic peptide, wherein R1 is preferably n-octanoyl, decanoyl, lauroyl, palmitoyl, 17-carboxylic acid-heptadecanoyl or a deletion, more preferably n-octanoyl or a deletion; Xaa6 is preferably Lys or Dab, Xaa8 is preferably D-Phe or D-Leu.
  11. 如权利要求10所述的多肽或其药用盐,所述多肽是由正辛酰基-Dab-Thr-Dab-Lys-Dab-D-Phe-Leu-Dab-Dab-Glu组成的肽或环肽。The polypeptide according to claim 10 or a pharmaceutically acceptable salt thereof, which is a peptide or cyclic peptide consisting of n-octanoyl-Dab-Thr-Dab-Lys-Dab-D-Phe-Leu-Dab-Dab-Glu. .
  12. 如权利要求11所述的多肽或其药用盐,所述多肽氨基酸序列如下:The polypeptide of claim 11 or a pharmaceutically acceptable salt thereof, the amino acid sequence of the polypeptide being as follows:
    Figure PCTCN2018112889-appb-100002
    Figure PCTCN2018112889-appb-100002
  13. 如权利要求1-3任一项所述的多肽或其药用盐,所述多肽的氨基酸序列与如下序列之一具有至少70%的序列同一性:The polypeptide of any one of claims 1 to 3, or a pharmaceutically acceptable salt thereof, having an amino acid sequence of at least 70% sequence identity to one of the following sequences:
    Figure PCTCN2018112889-appb-100003
    Figure PCTCN2018112889-appb-100003
    Figure PCTCN2018112889-appb-100004
    Figure PCTCN2018112889-appb-100004
    Figure PCTCN2018112889-appb-100005
    Figure PCTCN2018112889-appb-100005
  14. 权利要求1-13任一项所述多肽或其药用盐的制备方法,包括:合成所述多肽。A method of producing a polypeptide according to any one of claims 1 to 13, or a pharmaceutically acceptable salt thereof, comprising: synthesizing the polypeptide.
  15. 权利要求1-13任一项所述的多肽或其药用盐的用途,其特征在于,用于抑菌、抗菌或制备抑菌、抗菌物质。Use of the polypeptide according to any one of claims 1 to 13, or a pharmaceutically acceptable salt thereof, for use in bacteriostatic, antibacterial or antibacterial or antibacterial substances.
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