WO2011089457A1 - Nouveaux composés médicinaux - Google Patents
Nouveaux composés médicinaux Download PDFInfo
- Publication number
- WO2011089457A1 WO2011089457A1 PCT/HU2011/000009 HU2011000009W WO2011089457A1 WO 2011089457 A1 WO2011089457 A1 WO 2011089457A1 HU 2011000009 W HU2011000009 W HU 2011000009W WO 2011089457 A1 WO2011089457 A1 WO 2011089457A1
- Authority
- WO
- WIPO (PCT)
- Prior art keywords
- group
- pyrimidin
- carbaldehyde
- heterocyclic
- pyrimidine
- Prior art date
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- 150000001875 compounds Chemical class 0.000 title claims abstract description 86
- 241000187479 Mycobacterium tuberculosis Species 0.000 claims abstract description 24
- 238000000034 method Methods 0.000 claims abstract description 16
- 201000010099 disease Diseases 0.000 claims abstract description 14
- 208000037265 diseases, disorders, signs and symptoms Diseases 0.000 claims abstract description 14
- 238000004519 manufacturing process Methods 0.000 claims abstract description 9
- 239000000825 pharmaceutical preparation Substances 0.000 claims abstract description 7
- 239000004480 active ingredient Substances 0.000 claims abstract description 6
- 125000000623 heterocyclic group Chemical group 0.000 claims description 50
- 125000003277 amino group Chemical group 0.000 claims description 39
- 125000005392 carboxamide group Chemical group NC(=O)* 0.000 claims description 39
- 125000000304 alkynyl group Chemical group 0.000 claims description 33
- 125000003342 alkenyl group Chemical group 0.000 claims description 30
- 125000003118 aryl group Chemical group 0.000 claims description 25
- 125000000753 cycloalkyl group Chemical group 0.000 claims description 24
- -1 4-Methoxyphenylamino Chemical group 0.000 claims description 20
- 150000003839 salts Chemical class 0.000 claims description 20
- 125000004453 alkoxycarbonyl group Chemical group 0.000 claims description 18
- 125000002915 carbonyl group Chemical group [*:2]C([*:1])=O 0.000 claims description 18
- 125000000000 cycloalkoxy group Chemical group 0.000 claims description 18
- 125000005740 oxycarbonyl group Chemical group [*:1]OC([*:2])=O 0.000 claims description 15
- 125000002887 hydroxy group Chemical group [H]O* 0.000 claims description 14
- DNCYBUMDUBHIJZ-UHFFFAOYSA-N 1h-pyrimidin-6-one Chemical compound O=C1C=CN=CN1 DNCYBUMDUBHIJZ-UHFFFAOYSA-N 0.000 claims description 13
- 125000004435 hydrogen atom Chemical group [H]* 0.000 claims description 12
- 125000000217 alkyl group Chemical group 0.000 claims description 11
- 125000003302 alkenyloxy group Chemical group 0.000 claims description 9
- 125000003282 alkyl amino group Chemical group 0.000 claims description 9
- 125000005431 alkyl carboxamide group Chemical group 0.000 claims description 9
- 125000005133 alkynyloxy group Chemical group 0.000 claims description 9
- 125000005264 aryl amine group Chemical group 0.000 claims description 9
- 125000004104 aryloxy group Chemical group 0.000 claims description 9
- 125000001820 oxy group Chemical group [*:1]O[*:2] 0.000 claims description 9
- 125000005092 alkenyloxycarbonyl group Chemical group 0.000 claims description 8
- 125000005161 aryl oxy carbonyl group Chemical group 0.000 claims description 7
- VHLHXLJSHPMFCL-UHFFFAOYSA-N 2-chloro-4-oxopyrido[1,2-a]pyrimidine-3-carbaldehyde Chemical compound C1=CC=CN2C(=O)C(C=O)=C(Cl)N=C21 VHLHXLJSHPMFCL-UHFFFAOYSA-N 0.000 claims description 6
- 125000005225 alkynyloxycarbonyl group Chemical group 0.000 claims description 6
- 125000005843 halogen group Chemical group 0.000 claims description 6
- 125000004043 oxo group Chemical group O=* 0.000 claims description 6
- 125000001072 heteroaryl group Chemical group 0.000 claims description 3
- MTIRZTJNGMTPEX-UHFFFAOYSA-N 2-(2-fluoroanilino)-3-(2-fluorophenyl)imino-6-methyl-2H-pyrido[1,2-a]pyrimidin-4-one Chemical compound FC1=C(C=CC=C1)NC1N=C2N(C(C1=NC1=C(C=CC=C1)F)=O)C(=CC=C2)C MTIRZTJNGMTPEX-UHFFFAOYSA-N 0.000 claims description 2
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- YCVDISKMZYNAEO-UHFFFAOYSA-N 2-(cyclohexylamino)-3-[(cyclohexylamino)methyl]pyrido[1,2-a]pyrimidin-4-one;hydrochloride Chemical compound Cl.C1CCCCC1NC=1N=C2C=CC=CN2C(=O)C=1CNC1CCCCC1 YCVDISKMZYNAEO-UHFFFAOYSA-N 0.000 claims description 2
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- NHECRESQHYTRDA-UHFFFAOYSA-N 2-(cyclopentylamino)-3-[(cyclopentylamino)methyl]pyrido[1,2-a]pyrimidin-4-one;hydrochloride Chemical compound Cl.C1CCCC1NC=1N=C2C=CC=CN2C(=O)C=1CNC1CCCC1 NHECRESQHYTRDA-UHFFFAOYSA-N 0.000 claims description 2
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- XVHYDMFVCUFKNS-UHFFFAOYSA-N 2-(dimethylamino)-4-oxopyrido[1,2-a]pyrimidine-3-carbaldehyde Chemical compound C1=CC=CN2C(=O)C(C=O)=C(N(C)C)N=C21 XVHYDMFVCUFKNS-UHFFFAOYSA-N 0.000 claims description 2
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- LYKMMUBOEFYJQG-UHFFFAOYSA-N piperoxan Chemical compound C1OC2=CC=CC=C2OC1CN1CCCCC1 LYKMMUBOEFYJQG-UHFFFAOYSA-N 0.000 description 1
- 239000002798 polar solvent Substances 0.000 description 1
- 239000004584 polyacrylic acid Substances 0.000 description 1
- 239000001267 polyvinylpyrrolidone Substances 0.000 description 1
- 229920000036 polyvinylpyrrolidone Polymers 0.000 description 1
- 235000013855 polyvinylpyrrolidone Nutrition 0.000 description 1
- 229920001592 potato starch Polymers 0.000 description 1
- 239000003755 preservative agent Substances 0.000 description 1
- 125000004368 propenyl group Chemical group C(=CC)* 0.000 description 1
- 235000010232 propyl p-hydroxybenzoate Nutrition 0.000 description 1
- QELSKZZBTMNZEB-UHFFFAOYSA-N propylparaben Chemical compound CCCOC(=O)C1=CC=C(O)C=C1 QELSKZZBTMNZEB-UHFFFAOYSA-N 0.000 description 1
- 229960003415 propylparaben Drugs 0.000 description 1
- 230000002685 pulmonary effect Effects 0.000 description 1
- 229960005206 pyrazinamide Drugs 0.000 description 1
- IPEHBUMCGVEMRF-UHFFFAOYSA-N pyrazinecarboxamide Chemical compound NC(=O)C1=CN=CC=N1 IPEHBUMCGVEMRF-UHFFFAOYSA-N 0.000 description 1
- 239000012266 salt solution Substances 0.000 description 1
- 229920006395 saturated elastomer Polymers 0.000 description 1
- 239000008159 sesame oil Substances 0.000 description 1
- 235000011803 sesame oil Nutrition 0.000 description 1
- 239000000377 silicon dioxide Substances 0.000 description 1
- 235000012239 silicon dioxide Nutrition 0.000 description 1
- 229960001866 silicon dioxide Drugs 0.000 description 1
- 229910000029 sodium carbonate Inorganic materials 0.000 description 1
- 239000011780 sodium chloride Substances 0.000 description 1
- PESXGULMKCKJCC-UHFFFAOYSA-M sodium;4-methoxycarbonylphenolate Chemical compound [Na+].COC(=O)C1=CC=C([O-])C=C1 PESXGULMKCKJCC-UHFFFAOYSA-M 0.000 description 1
- 239000002689 soil Substances 0.000 description 1
- 239000008247 solid mixture Substances 0.000 description 1
- 239000008223 sterile water Substances 0.000 description 1
- 229960005322 streptomycin Drugs 0.000 description 1
- 238000007920 subcutaneous administration Methods 0.000 description 1
- 239000006228 supernatant Substances 0.000 description 1
- 239000002352 surface water Substances 0.000 description 1
- 239000000375 suspending agent Substances 0.000 description 1
- 239000006188 syrup Substances 0.000 description 1
- 235000020357 syrup Nutrition 0.000 description 1
- 125000003831 tetrazolyl group Chemical group 0.000 description 1
- 229930192474 thiophene Natural products 0.000 description 1
- 238000011200 topical administration Methods 0.000 description 1
- 231100000419 toxicity Toxicity 0.000 description 1
- 230000001988 toxicity Effects 0.000 description 1
- QORWJWZARLRLPR-UHFFFAOYSA-H tricalcium bis(phosphate) Chemical compound [Ca+2].[Ca+2].[Ca+2].[O-]P([O-])([O-])=O.[O-]P([O-])([O-])=O QORWJWZARLRLPR-UHFFFAOYSA-H 0.000 description 1
- 238000005292 vacuum distillation Methods 0.000 description 1
- 230000035899 viability Effects 0.000 description 1
- 125000000391 vinyl group Chemical group [H]C([*])=C([H])[H] 0.000 description 1
- 229920002554 vinyl polymer Polymers 0.000 description 1
- 230000001018 virulence Effects 0.000 description 1
- 238000011179 visual inspection Methods 0.000 description 1
- 238000002424 x-ray crystallography Methods 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D471/00—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00
- C07D471/02—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00 in which the condensed system contains two hetero rings
- C07D471/04—Ortho-condensed systems
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P31/00—Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
- A61P31/04—Antibacterial agents
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P31/00—Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
- A61P31/04—Antibacterial agents
- A61P31/06—Antibacterial agents for tuberculosis
Definitions
- the present invention concerns novel compounds possessing the general formula
- compositions containing an active substance possessing the general formula (I), and preparation thereof are effective in prevention and treatment of diseases caused by the bacterium Mycobacterium tuberculosis or other Mycobacteria.
- the invention concerns compounds
- R stands for any of the followings: hydrogen atom, halogen atom, hitrile group, alkyl group, cycloalkyl group, alkenyl group, alkynyl group, aryl group, heterocyclic group and its derivatives, alkoxy carbonyl group, cycloalkoxy carbonyl group, alkenyl oxycarbonyl group, alkynyl
- alkyl carboxamide group cycloalkyl carboxamide group, alkenyl carboxamide group, alkynyl carboxamide group, aryl carboxamide group, heterocyclic carboxamide group and its derivatives, hydroxyl group, alkoxy carbonyl group, cycloalkoxy carbonyl group, alkenyloxy group, alkynyloxy group, aryloxy group, heterocyclic oxy group and its derivatives, amine group, alkylamine group, cycloalkyl amine group, alkenyl amine group, alkynyl amine group, arylamine group, heterocyclic amine group and its derivatives;
- R' stands for hydrogen atom, alkyl group, cycloalkyl group, alkenyl group, alkynyl group, aryl group, heterocyclic group and its derivatives, alkoxy carbonyl group, cycloalkoxy carbonyl group, alkenyl oxycarbonyl group, alkynyl oxycarbonyl group,
- aryloxycarbonyl group, heterocyclic oxycarbonyl group and its derivatives alkyl carboxamide group, cycloalkyl carboxamide group, alkenyl carboxamide group, alkynyl carboxamide group, aryl carboxamide group, heterocyclic carboxamide group and its derivatives, hydroxyl group, alkoxy carbonyl group, cycloalkoxy carbonyl group,
- alkenyloxy group alkynyloxy group, aryloxy group,
- heterocyclic oxy group and its derivatives amine group, alkylamine group, cycloalkylamine group, alkenyl amine group, alkynyl amine group, arylamine group, heterocyclic amine group and its derivatives;
- R' '' stands for any of the followings: hydrogen atom, alkyl group, cycloalkyl group, alkenyl group, alkynyl group, aryl group, heterocyclic group and its derivatives, alkoxy carbonyl group, cycloalkoxy carbonyl group, alkenyl
- alkylcarboxamide group cycloalkylcarboxamide group, alkenyl carboxamide group, alkynyl carboxamide group, arylcarboxamide group, heterocyclic carboxamide group and its derivatives, hydroxyl group, alkoxy carbonyl group, cycloalkoxy carbonyl group, alkenyloxy group, alkynyloxy group, aryloxy group, heterocyclic oxy group and its derivatives, amine group, alkylamine group,
- R' ' and R' ' ' constitutes unsubstituted or substituted aromatic or unsubstituted or substituted heteroaromatic ring or cycloalkyl or
- the invention moreover concerns the procedure for
- Mycobacterium genus inhabit the surface waters and the upper levels of the soil; they are important, mostly saprophyte microorganisms that contribute to biodegradation of organic materials in the environment. Some Mycobacterium species, however, became pathogenic in the course of the evolution: in this respect, one should mention
- Mycobacterium tuberculosis and Mycobacterium bovis as the most important pathogens in the Mycobacterium tuberculosis complex, that also contains the following other species: M. bovis bacillus Calmette-Guerin , M. africanum, M. microti, M. canetti, M. caprae.
- tuberculosis disease and the human race have existed together for a very long time.
- the eradication of tuberculosis is still far away, and newly appearing multi-drug resistant and extremely multi-drug resistant tuberculosis strains cause new difficulties in therapy (Gergely, R. Medicina Thoracalis 1998; 51:185-188; Hutas I. HIPPOCRATES Vol. I. (5) 260, 1999) .
- the global health challenge caused by tuberculosis, can be characterized by the following numbers: every year 8 million new TB cases are diagnosed, and 2 million casualties are caused by tuberculosis.
- One third of the human population carries the tuberculosis bacterium ⁇ WHO Report, 2001, Geneva) .
- tuberculosis as a co-infection, increasing the number of new cases worldwide. About 15% of all AIDS sufferers die from tuberculosis .
- MDR multi-drug resistant
- the Mycobacterium tuberculosis bacterium When the Mycobacterium tuberculosis bacterium enters the lung by inhalation, it becomes internalized by phagocytosis into macrophages of the lung, i.e. the alveolar macrophages. The bacteria will survive in the macrophages, and may remain in the lung for years or disperse in the body of the host
- macrophage can be in an active, dividing, or in a passive sleeping, or dormant state with very low metabolism.
- anti-tuberculosis therapies apply multiple drugs through a period of 6 to 9 months in non-MDR strains, and up to 24 months in the case of MDR or XDR strains.
- the aim of the present invention is to overcome the above mentioned difficulties with new anti-tuberculotic drug
- alkyl carboxamide group cycloalkyl carboxamide group, alkenyl carboxamide group, alkynyl carboxamide group, aryl carboxamide group, heterocyclic carboxamide group and its derivatives, hydroxyl group, alkoxy carbonyl group, cycloalkoxy carbonyl group, alkenyloxy group, alkynyloxy group, aryloxy group, heterocyclic oxy group and its derivatives, amine group, alkylamine group, cycloalkyl amine group, alkenyl amine group, alkynyl amine group, arylamine group, heterocyclic amine group and its derivatives;
- R' stands for hydrogen atom, alkyl group, cycloalkyl group, alkenyl group, alkynyl group, aryl group, heterocyclic group and its derivatives, alkoxy carbonyl group, cycloalkoxy carbonyl group, alkenyl oxycarbonyl group, alkynyl oxycarbonyl group,
- aryloxycarbonyl group, heterocyclic oxycarbonyl group and its derivatives alkyl carboxamide group, cycloalkyl carboxamide group, alkenyl carboxamide group, alkynyl carboxamide group, aryl carboxamide group, heterocyclic carboxamide group and its derivatives, hydroxyl group, alkoxy carbonyl group, cycloalkoxy carbonyl group, alkenyloxy group, alkynyloxy group, aryloxy group,
- heterocyclic oxy group and its derivatives amine group, alkylamine group, cycloalkylamine group, alkenyl amine group, alkynyl amine group, arylamine group, heterocyclic amine group and its derivatives;
- Q stands for halogen atom, or NR''R''', where R' ' es
- R' '' stands for any of the followings: hydrogen atom, alkyl group, cycloalkyl group, alkenyl group, alkynyl group, aryl group, heterocyclic group and its derivatives, alkoxy carbonyl group, cycloalkoxy carbonyl group, alkenyl oxycarbonyl group, alkynyl oxycarbonyl group, aryl
- alkylcarboxamide group cycloalkylcarboxamide group, alkenyl carboxamide group, alkynyl carboxamide group, arylcarboxamide group, heterocyclic carboxamide group and its derivatives, hydroxyl group, alkoxy carbonyl group, cycloalkoxy carbonyl group, alkenyloxy group, alkynyloxy group, aryloxy group, heterocyclic oxy group and its derivatives, amine group, alkylamine group,
- R' ' and R' ' ' constitutes unsubstituted or substituted aromatic or unsubstituted or substituted heteroaromatic ring or cycloalkyl or
- compositions which contain as active substance one or more compounds possessing the general formula (I) and/or their pharmaceutically applicable organic or inorganic salt(s) at pharmaceutically applicable concentrations together with one or more pharmaceutically applicable diluting agent (s),
- excipient ( s ) excipient ( s ) , and/or inert carrier (s) .
- the term “excellentalkyl” stands for substituents possessing acyclic straight or branched chains of at most 20 carbon atoms, such as methyl, ethyl, n-propyl, n-butyl, 1-methyl-ethyl, i- propyl, tertiary butyl.
- the alkyl group may be further
- the term “padcycloalkyl” stands for substituents possessing cycloalkyl groups with 3-12 carbon atoms, e.g. cyclopropyl, cyclobutyl, cyclopentyl and cyclohexyl.
- the cycloalkyl group may be further substituted, i. e. it may contain any of the following substituents: F, CI, Br, OH, OMe, methyl, ethyl, CN,
- the term facedaryl stands for substituents possessing either an aromatic monocyclic group of 6 carbon atoms or a aromatic bicyclic group of 10 carbon atoms, e.g. phenyl, 1-naphtyl or 2- naphtyl .
- the aryl group may be further substituted, i. e. itmay contain any of the following substituents: F, CI, Br, OH,
- alkenyl group may be further substituted, i. e. it may contain any of the following
- alkynyl group may be further substituted, i. e. it may contain any of the following
- heterocyclic stands for substituents possessing cyclic groups where one or more carbon atoms are substituted with nitrogen, oxygen or sulphur atoms, e.g. pyrrole,
- heterocyclic group may be further substituted, i.e. it may contain any of the following
- the compounds possessing the general formula (I) and the pharmaceutically applicable compositions containing their inorganic or organic salts in either solid or fluid forms may be administered by any of the following routes: peroral, parenteral (including subcutaneous, intramuscular,
- the solid compositions to be administered by peroral route may be in the form of powder, capsule, pill (tablet) , film tablet, microcapsule, etc, and may contain as carrier materials like binders (e.g. gelatin, sorbitol, polyvinyl-pirrolidone) ; fillers (e.g. lactose, glucose, starch, calcium-phosphate, etc); auxiliary materials (e.g. magnesium-stearate, talcum, polyethylene-glycol, silicon-dioxide, etc) ; lubrication agents (e.g. sodium-lauryl-sulphate, etc), etc.
- binders e.g. gelatin, sorbitol, polyvinyl-pirrolidone
- fillers e.g. lactose, glucose, starch, calcium-phosphate, etc
- auxiliary materials e.g. magnesium-stearate, talcum, polyethylene-glycol, silicon-dioxide, etc
- lubrication agents
- the fluid compositions to be administered by peroral route may be in the form of solutions, suspensions or emulsions which may contain as carrier materials e.g. suspending agents (e.g. gelatin, carboxy-methyl-cellulose, etc) ; emulgation agents (e.g. sorbitane monooleate, etc) stb.; solvents (e.g. water, oils, glycerol, propylene glycol, ethanol) ; preservatives (e.g. p-hydroxy-benzoate methyl-ester, etc), etc.
- suspending agents e.g. gelatin, carboxy-methyl-cellulose, etc
- emulgation agents e.g. sorbitane monooleate, etc
- solvents e.g. water, oils, glycerol, propylene glycol, ethanol
- preservatives e.g. p-hydroxy-benzoate methyl-ester, etc
- parenteral compositions constitute solutions or suspensions, which contain the compounds
- non-aqueous solutions e.g. in polyethylene glycol, polyvinyl pirrolidone, lecithin, peanut oil or sesame oil.
- the solution may be lyophilized and re-dissolved in an adequate solvent just before administration.
- compositions applicable via the nasal route covered by the present inventions may contain the compounds possessing the general formula (I) and/or their pharmaceutically applicable organic and inorganic salts in the form of aerosols, drops, gels and powders.
- the aerosol compositions covered by the present invention may contain the compounds possessing the general formula (I) and/or their pharmaceutically applicable organic and inorganic salts in the form of a sterile solution or fine suspension prepared using a pharmaceutically adequate aqueous or nonaqueous solvent.
- the sterile aerosol may be present in a container containing one dose or multiple doses, where the dosage or the refill is provided, and which is usually equipped with a vaporizer.
- the closed container may also be adequate for dosage of unit doses; such as the single- dose nasal inhalator or the aerosol-container equipped with a dosing valve, disposable when emptied.
- the aerosol-container is equipped with a dosing valve, then it contains some form of carrier gas, e.g. compressed gas (e.g. compressed air) or organic carrier gas (chlorinated or fluorinated hydrocarbon) . Dosage of the aerosol may also be administered by a vaporizer pump .
- carrier gas e.g. compressed gas (e.g. compressed air) or organic carrier gas (chlorinated or fluorinated hydrocarbon) .
- Dosage of the aerosol may also be administered by a vaporizer pump .
- compositions applicable via the buccal route covered by the present invention may contain the compounds possessing the general formula (I) and/or their pharmaceutically
- a carrier e.g. sugar, gum arabic, gum tragacanth, gelatin, glycerol, etc.
- compositions covered by the present invention may also be administered via the rectal route.
- Such compositions are usually in the form of suppositories, which contain the active ingredient mixed in a suppositorial carrier material, e.g. cocoa butter (theobroma cacao) or other known carrier.
- a suppositorial carrier material e.g. cocoa butter (theobroma cacao) or other known carrier.
- the suppositories are produced in the usual manner by first mixing the components with the melted carrier, then molding the mixture using adequate mould forms.
- compositions covered by the present invention is also applicable as transdermal preparation, e.g. in the form of ointment, gel or patch.
- compositions covered by the present invention are produced by i) mixing the active ingredient (containing the compounds possessing the general formula (I) and/or their pharmaceutically applicable organic and inorganic salts) and the carrier material (s) and ii) formulating the produced mixture into the form of any already described pharmaceutical preparation.
- the methods to be applied for producing such pharmaceutical preparations are described in the art (e.g. in the above mentioned handbook ([Remington's
- the present invention also covers the application of one or more pharmaceutical compositions, containing the compounds possessing the general formula (I) and/or their pharmaceutically applicable organic and inorganic salts in the form of any pharmaceutically applicable
- the compounds covered by the present inventions were identified by using high-throughput in silico (i.e. computer- driven and -modeled) docking screen on the whole surface of the dUTPase enzyme from Mycobacterium tuberculosis, which is essential for viability of the bacterium.
- the starting compound database contained over one million small molecular compounds present and described in electronic catalogues of chemical companies. This compound database was docked on the surface of the Mycobacterium tuberculosis dUTPase protein using our computer cluster and the docking software Frigate, developed by us. Results were evaluated using mathematical optimization by the Frigate software to reveal fitting data of the compounds to the surface of the Mycobacterium tuberculosis dUTPase protein.
- the small molecular compounds were treated as flexible molecules and their locations in the three-dimensional space and their three-dimensional structures (considering all possible rotations along the rotatable chemical bonds) were optimized.
- the compounds characterized with the best binding profiles were further screened based on important pharmacological properties (e.g. log P) .
- Reaction scheme 1 The reaction was generalized for substituted derivatives of 2-aminopyridine as well.
- reaction was generalized for pyrido [1, 2-a] pyrimidin- 2, 4-dione compounds produced using substituted derivatives of 2-aminopyridine as well.
- the compound 2-R-amino-3-R-iminomethylpyrido [ 1, 2- a] pyrimidin-4-one can be generated by reacting 2-chloro-4- oxopyrido [ 1 , 2-a] pyrimidine-3-carbaldehyde in adequate polar solvent with primer amines as shown in reaction scheme 3.
- the produced hydrochloric acid may be neutralized using either excess amines o
- the 3-iminomethyl-group of the Schiff-base generated from primary amines may be reduced (using e.g. sodium borohydride) into aminomethyl-group (c.f. reaction scheme 4).
- reaction scheme 5 the carbaldehyde group can be hydrated to generate carbaldehyde-hydrate (geminal diol) .
- the compounds were characterized using thin layer chromatography (Merck TLC Silica gel 60 F 254 ) and NMR (11.7 Tesla Bruker Avance-500 (double channel) spectrometer, 300K, d6-DMSO solvent) .
- the separated yellow precipitate is filtered and washed with 2x200 ml water and 2x100 ml dichloromethane, dried at 40 °C in vacuum. Yield: 92.7 g (0.44 mol, 91 % ) ;
- the carbaldehyde group may be hydrated into carbaldehyde hydrate (geminal diol) .
- the product was gained as 2-allylamino-4-oxopyrido [ 1 , 2- a] pyrimidine-3-carbaldehyde hydrate (Yield: 55 %, solid yellow product) .
- the protein enzymes Mycobacterium tuberculosis dUTPase and Homo sapiens dUTPase were expressed in E. coli expression system and were purified to homogeneity as described previously (Varga et al. Biochem Biophys Res Commun. 2008 313:p. 8-13.; Varga et al. FEBS Lett. 2007 581: p. 4783-8.).
- enzyme assay measurements To investigate the effects of several compounds, we carried out enzyme assay measurements. The potential dUTPase inhibitory effects of the compounds were investigated using the malachite green assay (McQuade, T. J. et al. , Anal Biochem. 2009 386: p. 244-50.).
- the phosphate produced via the coupled reaction binds to malachite green and changes its colour.
- the colour change is detected spectrophotometrically, thus we directly measure the concentration of the produced phosphate, thereby indirectly measuring the velocity of the enzymatic reaction and the extent of the inhibition.
- the concentration of the enzyme was 50 nM.
- tuberculosis dUTPase tuberculosis dUTPase. None of these compounds inhibited the human dUTPase enzyme.
- Mycobacterium tuberculosis dUTPase protein does not form crystals in the absence of bound ligands.
- the appearance of protein crystals in the presence of the compounds indicated that crystallization was facilitated by the binding of the compounds TB 807 or TB 808. This also indicates that the compounds TB 807 or TB 808 are present as bound to the protein in the crystals.
- X-ray crystallographic data collection was performed on a Rigaku R-AXIS RAPID diffractometer ⁇ Mycobacterium tuberculosis dUTPase together with compound TB 807, full data set was collected, resolution 2.5 A, space group: P6 3 ) and also on synchrotron (ESRF Grenoble, beamline 14-4, Mycobacterium tuberculosis dUTPase together with compound TB 807, full data set was collected, resolution: 2 A or 1, 6 A, space group: P63) .
- the XDS program and molecular replacement was used for data analysis and solving the phase problem.
- tuberculosis dUTPase was used as the model (PDB ID: 3HZA) .
- Example 8 Bacteriologic evaluations of the TB8
- the compounds to be tested were dissolved in DMSO, and after sterile filtration, these were diluted with DMSO to produce ten distinct concentrations in the 0.05 - 100 ⁇ g/ml range.
- the test tubes were then infected with diluted bacterium suspensions (100 ⁇ ) and these were incubated for 28 days in 37 °C.
- the minimal inhibitory concentration i.e., the minimal compound concentration that prevents bacterial growth to turn the Sula media turbid was identified by visual inspection. Aliquots from the test tubes potentially containing still surviving bacteria were used to inoculate solid Lovenstein-Jensen medium (Lowenstein, E.
- Table 9 MIC values of the TB8 derivatives in M.
- Table 10 MIC values of the TB8 derivatives in M. kansasii :
- Table 11 MIC values of some TB8 derivatives on multidrug- resistant M. tuberculosis culture
- the cytotoxicity of the TB8 derivatives were examined in HepG2 (human hepatoma) , MonoMac6 (human monocyte) cell lines, on human PBMC (human peripheral blood monomorphonuclear ) cells, and on mouse bone marrow macrophage cells.
- the cytostatic effects were examined on HepG2, onoMac6, and PBMC cell lines.
- the cells were incubated at 37 °C for three hours, and then the compounds were washed out from the cells.
- the cytostaticity test the cells were incubated at 37 °C for three days in 5% C0 2 atmosphere.
- A means the difference in the absorbance averaged in the 4-8 parallel experiments.
- Table 12 Comparison of the MIC and IC 50 values for some members of the TB8 family
- Example 10 Examination of the interaction of drug compounds with lipid layers
- the lipid mixed film consists of the mixture of the lipid and the drug compound in 5 to 1 molar ratio.
- the concentration of the compound was 2xl0 ⁇ 6 M.
- addition of the compound TB801 to the lipid did not result in any difference as compared to the drug- free lipid.
- the second method penetration of drug into the lipid layer was detected by the change of surface pressure.
- pure lipid monolayer was formed and following one compression/expansion cycle, the layer was compressed to a given value of surface pressure (15 and 20 mN/m) .
- the compound was injected below the lipid layer and interaction between the compound and the lipd layer was evaluated based on eventual changes of surface pressure.
- the solubility and the amphiphilicity of the TB 801 compound was also determined by measuring the octanol/water ratio log P app , and by measuring the surface tension of aqueous solutions containing the compound TB 801 (Table 12). The static surface tension was changed only in the 40 times more
- the following materials are mixed: 0.01-50% drug compound possessing the general formula (I), 15-50% lactose, 15-50% potato starch, 5-15% polyvinylpyrrolidone, 1-5% talcum, 0.01- 3% magnesium-stearate, 1-3% colloidal silicon-dioxide, and 2-7 ultraamylopectin .
- the mixture is granulated by the wet
- Dragees and film tablets The pills produced as described above are coated with entero- or gastrosolvent film coating, or with sugar-containing coating and talcum. Dragees are coated with a mixture of bee wax and carnauba wax.
- Capsules
- Components 0.01-15% drug compound possessing the general formula (I), 0.1-2% sodium-hydroxide, 0.1-3% citric acid, 0.05- 0.2% nipagin (sodium methyl 4-hydroxy-benzoate) , 0.005-0.02% nipasol, 0.01-0.5% carbopol (polyacrylic acid), 0.1-5% 96% ethanol, 0.1-1% flavouring material, 20-70% sorbitol (70 % aqueous solution) and 30-50% distilled water.
- Carbopol in small doses is added to an aqueous solution of nipagin and citric acid with extensive stirring of the mixture. The resulting solution is left to stand for 10-12 hours. Then, sodium hydroxide (dissolved in 1 ml distilled water) , the aqueous solution of sorbitol and finally the ethanol solution of raspberry-flavor is added during strong stirring. To the such prepared carrier material, the drug compound is added in small doses and is homogenized using immersion homogenizer. Finally the suspension is filled up to the final volume and the suspension syrup is produced in its final form using a colloid mill. e) Suppositories :
- the content of the ampoules is dissolved right before use in sterile water or sterile physiological salt solution (0.9% sodium chloride) .
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Abstract
L'invention concerne des nouveaux composés médicinaux représentés par la formule générale (I), des compositions pharmaceutiques de tels principes actifs ainsi que le procédé permettant de les fabriquer; R, X, A et Q étant tels que définis dans les revendications. Les nouveaux composés sont efficaces pour empêcher et/ou traiter des maladies provoquées par la bactérie Mycobacterium tuberculosis ou toute autre mycobactérie.
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
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HU1000034A HUP1000034A2 (en) | 2010-01-21 | 2010-01-21 | Pyrido[1,2-a]pyrimidine derivatives and pharmaceutical preparations thereof having anti - mycobacterial activity |
HUP1000034 | 2010-01-21 |
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Citations (3)
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WO2002087589A1 (fr) * | 2001-04-26 | 2002-11-07 | Daiichi Pharmaceutical Co., Ltd. | Medicament permettant d'inhiber une pompe d'elimination de medicament |
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WO2010003533A2 (fr) * | 2008-06-17 | 2010-01-14 | Institut Pasteur Korea | Composés anti-infectieux |
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2010
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2011
- 2011-01-21 WO PCT/HU2011/000009 patent/WO2011089457A1/fr active Application Filing
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WO2002087589A1 (fr) * | 2001-04-26 | 2002-11-07 | Daiichi Pharmaceutical Co., Ltd. | Medicament permettant d'inhiber une pompe d'elimination de medicament |
US20070027164A1 (en) * | 2003-01-29 | 2007-02-01 | Stockwell Brent R | Agents for treating neurodegenerative diseases |
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