WO2010043114A1 - Use of serum/plasma microrna in early diagnosis of hbv infection and liver cancer - Google Patents

Use of serum/plasma microrna in early diagnosis of hbv infection and liver cancer Download PDF

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WO2010043114A1
WO2010043114A1 PCT/CN2009/001138 CN2009001138W WO2010043114A1 WO 2010043114 A1 WO2010043114 A1 WO 2010043114A1 CN 2009001138 W CN2009001138 W CN 2009001138W WO 2010043114 A1 WO2010043114 A1 WO 2010043114A1
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mir
hbv
hepatitis
group
combination
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PCT/CN2009/001138
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Chinese (zh)
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曾科
张辰宇
张峻峰
李丽民
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北京命码生科科技有限公司
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Priority to CN200980104816.6A priority Critical patent/CN102016037B/en
Publication of WO2010043114A1 publication Critical patent/WO2010043114A1/en

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    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/70Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving virus or bacteriophage
    • C12Q1/701Specific hybridization probes
    • C12Q1/706Specific hybridization probes for hepatitis

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  • the invention relates to the application research of serum/plasma microRNA (miRNA) in early diagnosis and dynamic monitoring of HBV-positive liver cancer, and specifically relates to early diagnosis, therapeutic evaluation, drug screening and drug efficacy evaluation of HBV-related diseases, especially liver cancer. Aspect of the application. Background technique
  • Hepatocellular Carcinoma is one of the most common malignant tumors in the world.
  • the International Agency for Research on Cancer (IARC) estimates that there were 564,000 cases of liver cancer in the world in 2000, with a death rate of 549,000.
  • the incidence of liver cancer in China was 306,000 and the death rate was 300,000.
  • More than half of the global morbidity and mortality of liver cancer is one of the major cancers that seriously endanger the health of our people.
  • the occurrence of liver cancer is a multi-factor, multi-stage process.
  • Globally, chronic HBV and HCV infection are major risk factors for primary hepatocellular carcinoma (HCC), especially in areas with chronic HBV infection and HCC. Consistency, related to 75% of global liver cancer, even reaching 85% in developing countries.
  • HBV infection is also the primary risk factor. It is estimated that the number of HBV carriers in China has reached 120 million, 20% of which will develop into chronic hepatitis B (CHB), and there is a significant progress in the activity of chronic hepatitis B. The tendency is that 15%-40% will progress to cirrhosis, and more than 90% of liver cancer patients in China have cirrhosis. Therefore, HBV infection, chronic hepatitis B, and cirrhosis to liver cancer are the main patterns of liver cancer in China. In recent years, through the vaccination of neonatal hepatitis B vaccine and the prevention and treatment of hepatitis B, liver cancer has shown a downward trend in the first generation, but the true manifestation of the effects of vaccines and other measures may take 10-20 years.
  • HBV infection is a long and long process. In this process, the disease is prone to repeated activities, and the lesions often progress in stages. The later the worse, the later the more difficult to treat, after the cirrhosis, antiviral treatment It is difficult to completely prevent its further development, and HCC is one of the most malignant tumors. It has a short course, rapid progress, and poor prognosis. The 5-year survival rate is less than 10%. Therefore, the condition of HBV-infected patients needs long-term dynamic detection, grasp the patient's disease state and severity of the disease, and should make early diagnosis to determine the targeted prevention and treatment plan to maximize the long-term inhibition or elimination of HBV. Hepatocyte inflammation and necrosis and liver fibrosis delay and prevent disease progression, reduce and prevent liver decompensation, cirrhosis, primary hepatocellular carcinoma and its complications, thereby improving quality of life and prolonging survival.
  • AFP serum HBV markers and adenines
  • Biomarker HCC biomarkers
  • transaminase reflects liver damage.
  • Common indicators of degree but they are difficult to reflect the dynamic progress of HBV infection-related diseases, and the early diagnosis of the corresponding diseases is increasingly unable to meet the needs.
  • AFP-negative cases are diagnosed as liver cancer.
  • the sensitivity of diagnosing liver cancer is only 40%-60%, and the specificity is 70%-90%.
  • the diagnosis of liver cirrhosis and the judgment of lesion degree still lack suitable biomarkers.
  • researchers at home and abroad are exploring new biomarkers to effectively supplement AFP, it is difficult to break through the bottleneck in the development and application of traditional biomarkers, that is, it is difficult to prepare and quantitatively detect antibodies.
  • HCC is relatively insidious and has a poor prognosis.
  • HBV infection and HCC treatment have limited effect.
  • targeted therapy requires dynamic monitoring of the effects of HBV infection and HCC treatment, and understand the natural history of HBV infection, HCC.
  • the molecular mechanisms of occurrence and development gain access to easily modulating therapeutic targets. Therefore, finding a new class of specific biomarkers is a top priority for liver cancer prevention and treatment.
  • MicroRNA is a research hotspot in recent years. It is a single-stranded RNA molecule of about 19-23 nucleotides in length. It is located in the non-coding region of the genome and is highly evolutionarily conserved. It can regulate gene expression at the translational level. And closely related to many normal physiological activities of animals, such as biological individual development, tissue differentiation, apoptosis and energy metabolism, and also closely related to the occurrence and development of many diseases. Since the discovery of lin-4 and let-7, which have been involved in the regulation of nematode timing, microRNAs have gradually become a research hotspot for regulating mRNA stability and protein translation. They were selected into Science Magazine's top ten technological breakthroughs in 2002 and 2003 respectively. .
  • microRNAs can regulate at least 5,300 human genes, or 30% of all genes. With the deepening of research, more and more miRNAs have been discovered. Among them, the relationship between miRNAs and tumors has become the focus of research. Several miRNAs have been found to express negatively regulated genes with chronic lymphocytic leukemia, lung cancer, and breast. Cancer and colon cancer are highly correlated. The positive regulation of miRNAs The phenomenon of target genes is a recent discovery, and the specific mechanism is still unclear. Some researchers have proposed the "cancer microRNA" (OncomiRs) view that the abnormal expression of certain miRNAs plays a similar oncogene role in the development of tumors.
  • OncomiRs cancer microRNA
  • liver cancer especially hepatitis B-related liver cancer
  • hepatitis B-related liver cancer has a high incidence rate and high mortality in China, which seriously endangers people's health.
  • Domestic and foreign researchers have carried out extensive and in-depth research on liver cancer, but the relationship between hepatitis B virus and the development of liver cancer has not been fully elucidated.
  • Recent studies have shown that miRNA may play an important role in the development and progression of liver cancer, but there is no report on the use of serum/plasma microribonucleic acid for the diagnosis and treatment of liver cancer. Road.
  • the diagnosis of HCC caused by HBV infection is limited to various biochemical indicators in serum/plasma, as well as traditional medical and imaging methods, and there is no report on the use of serum/plasma microRNA for diagnosis and treatment of liver cancer. .
  • the present inventors will study the important application prospects of blood/plasma microribonucleic acid in the diagnosis and treatment of liver cancer caused by hepatitis B. Therefore, it is hoped that the HCC-specific serum microRNA expression database and liver cancer-specific markers caused by HBV infection can be obtained through the successful implementation of this subject, and a diagnostic kit for HCC caused by HBV infection can be developed to provide data support for the study of the occurrence and progression mechanism of HBV-related diseases.
  • the present inventors search for a class of liver cancer caused by HBV infection-related diseases, especially HBV infection, by isolating and studying microRNAs in the serum of normal humans, HBV carriers, chronic hepatitis B patients, hepatitis C patients, and HBV-infected liver cancer patients.
  • HBV infection-related diseases especially HBV infection
  • the problems to be solved by the present invention include: (1) Establishing a unified standard specimen library and data Library: A standard-compliant blood sample is collected using standard operating procedures (SOPs) and the system collects complete demographic data and clinical data.
  • SOPs standard operating procedures
  • the inventors collected standard blood samples by standard operating procedures (SOPs), systematically collected complete demographic data and clinical data, and employed RT-PCR methods, Real-time PCR methods, and Solexa sequencing.
  • SOPs standard operating procedures
  • RT-PCR methods Real-time PCR methods
  • Solexa sequencing One or more of technology and biochip methods.
  • the experimental methods of research mainly include the following parts:
  • Hepatitis B surface antigen and hepatitis B core antibody are positive for at least 6 months
  • Trizol Reagent (Invitrogen, Carlsbad, CA) extracts total serum RNA
  • RNA was recovered by PAGE to recover 17-27nt RNA molecules.
  • the Solexa method determines more than 50 copies of microRNA in normal and patient sera. Then, by using quantitative PCR technology and biochip technology, a class of serum/plasma microRNAs with large expression and degree of difference under disease and normal physiological conditions is screened as an index for predicting whether liver cancer and other diseases associated with HBV occur and the degree of disease diagnosis. . The final screening of the number of serum ribonucleic acids corresponding to liver cancer and HBV-related diseases is controlled in the order of a few to a dozen, which is an optimized reduction based on the chip probe library.
  • the diagnostic kit includes a batch of serum microRNA primers, Taq enzymes, dNTPs and other reagents.
  • the inventors detected differentially expressed normal persons and The ribonucleic acids in serum/plasma of patients with chronic hepatitis B include let-7c, miR-1, miR-10a, miR-122, miR-125b, miR-128a, miR-128b, miR-150, miR-197, miR- 221 , miR-222 , miR-223, miR-23a, miR-23b, miR-27a, miR-27b, miR-30a, miR-342-3p, miR-361-5p, miR-423-5p, miR- 532-5p, miR-574-3p, miR-629, miR-92a, miR-92b, miR-99a, miR-139-5p, miR-193a-5p, miR-193b, miR-365, miR-375, miR-455-3p, miR-483-3p, miR-483-5p, miR-486-3p, miR-1, miR-10a, mi
  • the present inventors demonstrated that there was no significant difference in the expression of serum microRNAs between normal controls and virus removers, between chronic hepatitis B patients and HBV carriers, and that normal controls and virus scavengers were integrated into a control group, chronic hepatitis B Patients and HBV carriers were integrated into the HBV group.
  • the specific implementation method is:
  • microRNAs whose copy number in chronic hepatitis B patients is 20 times the copy number in healthy controls are selected as serum markers for preliminary screening in the present invention, and the copy number of these microRNAs in chronic hepatitis B patients is larger than 50 copies, due to technical operation problems, abandoned miR-221 and miR-629.
  • the inventors performed 30 normal controls (samples sequenced with Solexa), 30 virus scavengers, 30 chronic hepatitis B patients (samples sequenced with Solexa), and 30 asymptomatic HBV infected persons.
  • the following 13 microRNAs were successfully detected in serum: miR-122a, miR-423, miR-92a, let-7c, miR-23a, miR-23b, miR-223, miR-342-3p, miR-375, miR- 99a, miR- 150, miR- 125b, miR-10a
  • the present inventors found that there was no significant difference in the expression of the 13 microRNAs between the normal control and the virus remover, between the chronic hepatitis B patients and the HBV carriers, and therefore, the normal controls and the virus scavengers were integrated into the control. Group, chronic hepatitis B patients and HBV carriers were integrated into the HBV group.
  • the selected 13 microRNAs can open the control group, the chronic hepatitis C infected person and the HBV component, and the specific implementation method is: Further detection of the specific expression of HBV, the above-mentioned real-time PCR method was used to detect the expression of these 13 microRNAs in the serum of 30 patients with chronic hepatitis C, and found that chronic hepatitis C infection can be combined with HBV components.
  • the 13 microRNAs could be used to detect chronic hepatitis C infection and HBV components.
  • the 13 microRNAs were compared in 100 control groups (50 healthy controls and 50 virus removers) and 75 HBV groups (25 HBV carriers).
  • the inventors also demonstrated six microRNAs among the selected 13 markers by cluster analysis: miR-375, miR-92a, miR-10a, miR-223, miR-423- 5 and miR-99a can distinguish the control group, the HBV group and the HCV group. There are only 2 cases in the 160 control group and only 135 cases in the HB V group are incorrectly classified, while the HC V group None of the cases were classified as errors.
  • the inventors finally demonstrated 8 microRNAs among the 13 selected markers: miR-23b, miR-423-5p, miR-375, miR-23a, miR-342- 3p, miR-10a, miR-125b, miR-92a can separate the HBV-HCC group from the HBV group and the control group.
  • the specific implementation method is:
  • the sera of 65 HBV-related HCC patients were collected for real-time PCR.
  • the real-time PCR results were clustered with the above control results and HBV results.
  • the results showed that 8 microRNAs: miR-23b, miR -423-5p, miR-375, miR-23a, miR-342-3p, miR-10a, miR-125b, miR-92a can separate the HBV-HCC group from the HBV group and the control group, 160 control groups Only 2 of the 135 HBV groups were misclassified, and none of the HBV-HCC groups were misclassified.
  • the inventors have also provided the diagnostic ability of low-expression or high-expression single or multiple markers to distinguish four groups of samples (Group N, Group HBV, Group HCV, Group HBV-HCC), and the specific implementation methods and results are as follows:
  • Risk-scores of real-time PCR results for normal control (Group N), HBV (Group HBV), HCV (Group HCV), and HBV-HCC (Group HBV-HCC) samples, expressed as microRNA per microRNA
  • the 5% or 95% reference interval is the risk value, and the ROC curve is used to evaluate the sensitivity and specificity of the prediction, thereby assessing the ability of low or high expression of single or multiple microRNAs in the early diagnosis of liver cancer.
  • ROC analysis showed that miR-375, miR-10a, miR-223 (miR-122a or miR-342-3p), miR-423
  • the control and HBV fractions were opened with 100% AUC (area under the ROC curve)
  • miR-92a and miR-423-5 were separated from the HCV group by 99.6% AUC, miR-23b, miR-423-5p , miR-375, miR-23a and miR-342-3p open the control and HCC components with 99.9% AUC, while miR-375 and miR-92a open HBV and HCV components, miR-10a and miR-92a
  • the HBV group and the HCC component were opened.
  • the sensitivity was 96.9% and the specificity was 99.4%.
  • the AUC was 99.2%
  • the sensitivity was 98.5%
  • the specificity was 98.5%.
  • the inventors have also prepared a diagnostic kit which can be used for early diagnosis of liver cancer, and the diagnostic kit comprises a stable presence in the serum/plasma of the subject.
  • the above microRNAs combination, method, and diagnostic kit can be used for early diagnosis and dynamic monitoring of HBV-related liver cancer and HBV infection, for the clinician to quickly and accurately grasp the patient's disease state and severity, and to obtain more personality in time.
  • the invention also provides a theoretical basis for the clinical application of serum microRNA biomarkers and monitoring kits, to find early indicators of changes in other diseases, to make early judgments on the therapeutic effects of diseases, to find more effective therapeutic targets for diseases, and to clarify diseases.
  • the molecular mechanisms of occurrence and development provide theoretical basis and technical support.
  • Serum miRNA is a novel biomarker that is not only stable, minimally invasive, and easy to distinguish from traditional biomarkers. Detection, and quantitative accuracy, will greatly improve the sensitivity and specificity of disease diagnosis.
  • the successful development of this kind of small molecule RNA biomarkers is the subversion of traditional protein-based biomarkers, which will be HBV-related liver cancer and Prevention and treatment of HBV infection Create a new situation and provide reference for the development of biomarkers for other diseases.
  • the serum miRNA monitoring kit is a systematic and comprehensive diagnostic kit.
  • the serum miRNA monitoring kit can clarify the disease progression of HBV-related liver cancer patients, comprehensively reflect the patient's disease state, avoid the complicated detection, and save the economy. Cost and time, support clinicians to quickly and accurately grasp the patient's condition and timely access to more personalized prevention and treatment programs.
  • the clinical application of miRNA biomarkers and diagnostic kits also provides methods and strategies for the development of biomarkers for other diseases.
  • serum/plasma microribonucleoside S-history detection technology can early diagnose HBV-associated liver cancer and HBV infection.
  • This new HBV-associated serum/plasma marker for liver cancer and HBV infection is not only comprehensively understood at the molecular level.
  • the mechanism of the occurrence and development of liver cancer provides a material basis and accelerates the progress of clinical disease diagnosis and therapeutics in liver cancer.
  • the effectiveness of early diagnostic kits for detecting liver cancer remains to be further clinically validated.
  • serum/plasma microribonucleic acid diagnostic technology for liver cancer will become a new technology for early diagnosis of liver cancer.
  • the doctor's application makes it easy for clinicians to make timely and effective individualized treatment for patients. Conquering liver cancer is no longer a dream.
  • Figure 1 shows hsa-miR-122a, hsa-miR-423-5p, hsa-miR-92a, hsa-let-7c, hsa-miR-23a, hsa-miR-23b, hsa-miR-223, hsa- miR-342-3p, hsa-miR-375, hsa-miR-99a, hsa-miR-150, hsa-miR-125b, hsa-miR-lOa 13 microRNAs as markers against healthy controls (A) and viruses
  • the scavenger (B) performs the results of the cluster analysis.
  • Figure 2 shows hsa-miR-122a, hsa-miR-423-5p, hsa-miR-92a, hsa-let-7c, hsa-miR-23a, hsa-miR-23b, hsa-miR-223, hsa- miR-342-3p, hsa-miR-375, hsa-miR-99a, hsa-miR-150, hsa-miR-125b, hsa-miR- 10a 13 microRNAs as markers for asymptomatic HBV carriers (C) The results of cluster analysis were performed with chronic hepatitis B patients (D).
  • Figure 3 shows hsa-miR-122a, hsa-miR-423-5p, hsa-miR-92a, hsa-let-7c, hsa-miR-23a, hsa-miR-23b, hsa-miR-223, hsa-miR-342-3p, hsa-miR-375, hsa-miR-99a, hsa-miR-150, hsa-miR-125b, hsa-miR- 10a 13 microRNAs as markers for healthy controls (A), viral scavengers (B), chronic hepatitis C patients (HCV), asymptomatic HBV-infected patients (C), and chronic hepatitis B patients (D) The result of the class analysis.
  • A healthy controls
  • B chronic hepatitis C patients
  • C asymptomatic HBV-infected patients
  • D chronic
  • Figure 4 shows hsa-miR-122a, hsa-miR-423-5p, hsa-miR-92a, hsa-let-7c, hsa-miR-23a, hsa-miR-23b, hsa-miR-223, hsa- miR-342-3p, hsa-miR-375, hsa-miR-99a, hsa-miR-150, hsa-miR-125b, hsa-miR- 10a 13 microRNAs as markers when compared to normal control (N), chronic The results of cluster analysis were performed in the hepatitis C patient group (HCV) and the HBV group (HBV).
  • Figure 5 shows the ROC curve between the normal control group and the HBV group.
  • Figure 6 shows the ROC curve between the normal control group and the HCV group.
  • Figure 7 shows the normal control in the case of has-miR-375, has-miR-92a, has-miR-10a, has-miR-223, has-miR-423-5 and has-miR-99a 6 microRNAs as markers Group (N), chronic hepatitis C (HCV) and HBV (HBV) cluster analysis results.
  • N markers Group
  • HCV chronic hepatitis C
  • HBV HBV
  • Figure 8 shows the ROC curve between the normal control group and the HBV-HCC group.
  • Figure 9 shows the ROC curve between the HBV group and the HBV-HCC group.
  • Figure 10 shows that has-miR-23b, has-miR-423-5p, has-miR-375, has-miR-23a, has-miR-342-3p, has-miR-10a, has-miR-125b and
  • N normal control
  • HBV-HCC liver cancer patient group
  • HBV group HBV
  • Hepatitis B surface antigen and hepatitis B core antibody are positive for at least 6 months
  • ALT and / or AST levels are more than twice the normal value
  • ALT and / or AST levels are more than twice the normal value
  • hsa-miR-122a, hsa-miR-423-5p, hsa-miR-92a, hsa-let-7c, hsa-miR-23a, hsa-miR-23b, hsa-miR-223, hsa were selected.
  • Hsa-mi -10a-F ACACTCCAGCTGGGTACCCTGTAGATCCGAA
  • cDNA samples a) Take 500 ul of serum; b) Add an equal volume of water-saturated phenol, mix by shaking, centrifuge at 3200 °C for 3 minutes at 3200 °C, and take supernatant; c) Supernatant + 1/2 volume ( 250ul) phenol + 1/2 volume (250ul) chloroform, vortex and mix, centrifuge at 3200C, 13200rpm for 3 minutes, take the supernatant; d) add the same volume of chloroform to the supernatant, shake at 4 °C, 13200rpm After 3 minutes, the supernatant was taken as an RNA sample; e) cDNA was then obtained by reverse transcription of RNA.
  • the reverse reaction system included 4 ⁇ l 5 AMV buffer, 2 ⁇ l lOmM each dNTP mixture ( Takara), 0.5 ⁇ l RNase Inhibitor ( Takara), 2 ⁇ 1 AMV ( Takara), and a 1.5 ⁇ 1 gene-specific reverse primer mixture.
  • the reaction step is 15 minutes incubation at 16 ° C, 1 hour reaction at 42 ° C, and 5 minutes incubation at 85 ° C;
  • (2) q-PCR dilute the cDNA in 1/5, extract the cDNA from the ⁇ , add 0.3 ⁇ 1 Taq enzyme ( Takara), ⁇ 20xEVA GREEN, 0.2 ⁇ 1 10 ⁇ forward primer, 0.2 ⁇ 1 10 ⁇ universal reverse Primers, 1.2 l 25 mM MgCl 2 , 1.6 ⁇ l 2.5 mM each dNTP mixture ( Takara), 2 ⁇ l lOx PCR buffer, 13.5 ⁇ l ⁇ 2 0, 20 ⁇ l system for q-PCR.
  • the instrument was an ABI Prism 7300 real-time PCR instrument.
  • the reaction conditions for the PCR were: 95 ° C, 5 minutes for 1 cycle ⁇ 95 ° C, 15 seconds, 60 ° C, 1 minute for 40 cycles.
  • AG C T groupi - C T g rou P 2 o
  • the data results are clustered by Cluster 3.0, and the results are analyzed. There was no significant difference between healthy controls and virus removers, and there was no significant difference between HBV carriers and chronic hepatitis B patients.
  • Figure 1 shows the results of cluster analysis of 30 healthy controls (A) and 30 viral scavengers (B).
  • Figure 2 shows 30 patients with asymptomatic HBV carriers (C) and 30 patients with chronic hepatitis B (D).
  • the results of the class analysis Figure 3 are 30 healthy controls (A), 30 viral scavengers (B), 30 chronic hepatitis C patients (HCV), 30 asymptomatic HBV carriers (C), and 30 chronic Results of cluster analysis of hepatitis B patients (D). It can be seen from Figure 1 that the healthy control (A) and the virus remover (B) clusters are inseparable.
  • HBV carriers (C) and chronic hepatitis B patients (D) clusters are also inseparable.
  • healthy controls A
  • virus removers B
  • HBV carriers C
  • chronic hepatitis B patients D
  • HBV chronic hepatitis C patients
  • the sera of 75 HBV groups (25 HBV carriers and 50 chronic hepatitis B patients) and 18 chronic hepatitis C patients were subjected to qRT-PCR assay of microRNA.
  • Table 3 shows that miR-375, miR-10a, miR-223 (miR-122a or miR-342-3p) and miR-423 open the control and HBV components at 100% AUC (area under the ROC curve), 4 shows that miR-92a and miR-423-5p open the control and HCV components with 99.6% AUC, while Table 5 shows that miR-375 and miR-92a open the HBV and HCV components.
  • miR-375, miR-10a, miR-223 and miR-423-5p 4 markers were used to distinguish the control group from the HBV group, the AUC was 99.9 + 0.1%, the sensitivity was 99.3%, and the specificity was 98.8%. 5).
  • miR-92a, miR-423 -5p 2 markers were used to distinguish the control group from the HCV group, the AUC was 99.6 ⁇ 0.4%, the sensitivity was 97.9%, and the specificity was 99.4% (Fig. 6).
  • Table 5 AUCs distinguishing single or multiple microRNAs from the HBV and HCV groups On the basis of the above results, clustering analysis was performed on 6 markers of miR-375, miR-92a, miR-10a, miR-223, miR-423-5 and miR-99a. The results of cluster analysis are shown in Fig. 7. Figure 7 shows that when using miR-375, miR-92a, miR-10a, miR-223, miR-423-5 and miR-99a 6 markers, the inventors were able to control, HBV and HCV groups. The three groups were divided, only two of the 160 control groups and only one of the 135 HBV groups were incorrectly classified, while none of the HCV groups were misclassified.
  • Example 5 HBV-related liver cancer patients were slightly sera Real-time PCR of ribonucleic acid
  • the sera of 65 HBV-related liver cancer patients were subjected to qRT-PCR assay of microribonucleotide using the primers of Table 2.
  • the experimental method, the qRT-PCR result processing method, and the clustering method were the same as those of Examples 3 and 4.
  • the inventors In order to evaluate the diagnostic ability of these 13 microRNAs in the early diagnosis of liver cancer, the inventors also performed risk-scores on the real-time PCR results of the control, HBV, HCV, and HBV-HCC samples, with each microRNA expression. The 5% or 95% reference interval is the risk value, and the ROC curve is plotted to assess the sensitivity and specificity of the prediction. The ROC analysis results are shown in Tables 6, 7 and Figures 8, 9.
  • Table 6 shows that miR-23b, miR-423-5p, miR-375, miR-23a and miR-342-3p open the control and HCC fractions with 99.9% AUC, showing miR-10a and miR-92a The HBV group and the HCC component were opened.
  • miR-23b, miR-423-5p, miR-375, miR-23a and miR-342-3p 5 markers to distinguish between the control group and the HBV-HCC group
  • the AUC was 99.9% ⁇ 0.1%
  • the sensitivity was 96.9. %
  • the specificity was 99.4% (Fig. 8)
  • the HBV group and the HBV-HCC group were distinguished by miR-10a and miR-125b
  • the AUC was 99.2%
  • the sensitivity was 98.5%
  • the specificity was 98.5%
  • FIG. 10 shows that when using miR-23b, miR-423-5p, miR-375, miR-23a, miR-342-3p, miR-10a, miR-125b and miR-92a 8 markers, the inventors
  • the HBV-HCC, HBV and control groups were divided into three groups. Only 4 of the 160 control groups and only 2 of the 135 HBV groups were misclassified, and none of the HBV-HCC groups were misclassified.
  • Example 6 Preparation of a microRNA kit for early diagnosis of HBV-associated liver cancer and HBV infection
  • microRNA kit The manufacturing process and operating procedures of the microRNA kit are based on solexa sequencing technology, real-time PCR technology and biochip technology.
  • microRNA was determined in the serum/plasma of normal and human hepatitis B patients by sequencing and real-time PCR. Then, quantitative PCR and biochip technology were used to screen HBV-associated liver cancer, other diseases related to HBV infection, and a large amount of serum/plasma microRNAs under normal physiological conditions as a predictor of HBV-related. Liver cancer and HB V infection and indicators of the extent of disease diagnosis. The final screening of HBV-associated liver cancer and HBV-infected serum/plasma microRNAs is controlled in a few to a dozen, which is an optimized reduction based on the chip probe library.
  • the kit includes a batch of serum/plasma microribonucleic acid primers, Taq enzymes, dNTPs and the like, wherein the primers of the microRNA include has-miR-375, has-miR-92a, has-miR-10a, has-miR- 223, has-miR-423-5p, has-miR-23b, has-miR-23a, has-miR-342-3p, Primers for has-miR-99a and has-miR-125b.
  • this kit is that only serum/plasma is needed without the need for other tissue samples, and the trend of microRNAs is detected by the most streamlined probe library, and the trend is used to predict the possibility of HBV liver cancer or to diagnose HBV liver cancer. Pathological stage. Therefore, putting this kit into practice can increase the possibility of early detection of HBV liver cancer and HBV infection, and help guide diagnosis and treatment.

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Abstract

A microRNA combination used for distinguishing HCV-infected persons, HBV-infected persons and HBV-related liver cancer patients from normal persons as well as the use thereof in early diagnosis of HBV infection and HBV-related liver cancer are provided. The combination contains all the serum/plasma microRNAs which have different expression profiles between HCV-infected persons, HBV-infected persons, HBV-related liver cancer patients and normal persons. A kit containing the microRNAs of the combination used for early diagnosis of HBV infection and HBV-positive liver cancer as well as the preparation method thereof are further provided. The main advantages of the kit include high specificity and high sensitivity.

Description

血清 /血浆 miRNA在 HBV感染和肝癌早期诊断中的应用 技术领域  Application of serum/plasma miRNA in HBV infection and early diagnosis of liver cancer
本发明涉及血清 /血浆微小核糖核酸(microRNA, miRNA ) 在 HBV 阳性肝癌早期诊断和动态监测中的应用研究, 具体涉及 HBV相关疾病尤 其是肝癌的早期诊断、 疗效评价、 药物筛选和药效评价等方面的应用。 背景技术  The invention relates to the application research of serum/plasma microRNA (miRNA) in early diagnosis and dynamic monitoring of HBV-positive liver cancer, and specifically relates to early diagnosis, therapeutic evaluation, drug screening and drug efficacy evaluation of HBV-related diseases, especially liver cancer. Aspect of the application. Background technique
肝细胞癌 (Hepatocellular Carcinoma, HCC)是全球最常见的恶性肿瘤 之一, 国际癌症研究中心(IARC )估计 2000年全球肝癌发病 56.4万, 死 亡 54.9万, 中国肝癌发病 30.6万, 死亡 30.0万, 占肝癌全球发病和死亡 人数一半以上, 是严重危害我国人民生命健康的主要癌症之一。 肝癌的发 生是一个多因素、 多阶段的过程, 就全球而言, 慢性 HBV和 HCV感染是 原发性肝细胞癌 (HCC )主要的危险因素, 尤其是慢性 HBV感染与 HCC 发病呈现高度的地域一致性, 与全球 75%的肝癌有关, 在发展中国家甚至 达到 85%。 在中国, HBV感染也是首要的危险因素, 据估计我国 HBV携 带者达到了 1.2亿之众, 其中 20%将发展成慢性乙型肝炎(CHB ) , 慢性 乙型肝炎活动性较强有明显的进展倾向, 15%-40%将进展为肝硬化, 而我 国肝癌患者中 90%以上有肝硬化, 因此, HBV感染、 乙型肝炎慢性化、 肝硬化至肝癌是我国肝癌发生的主要模式。 近年来通过新生儿乙肝疫苗的 接种和乙型肝炎的防治, 肝癌在青少年一代开始显示下降的趋势, 但疫苗 等措施作用的真正体现可能还需要 10-20年。  Hepatocellular Carcinoma (HCC) is one of the most common malignant tumors in the world. The International Agency for Research on Cancer (IARC) estimates that there were 564,000 cases of liver cancer in the world in 2000, with a death rate of 549,000. The incidence of liver cancer in China was 306,000 and the death rate was 300,000. More than half of the global morbidity and mortality of liver cancer is one of the major cancers that seriously endanger the health of our people. The occurrence of liver cancer is a multi-factor, multi-stage process. Globally, chronic HBV and HCV infection are major risk factors for primary hepatocellular carcinoma (HCC), especially in areas with chronic HBV infection and HCC. Consistency, related to 75% of global liver cancer, even reaching 85% in developing countries. In China, HBV infection is also the primary risk factor. It is estimated that the number of HBV carriers in China has reached 120 million, 20% of which will develop into chronic hepatitis B (CHB), and there is a significant progress in the activity of chronic hepatitis B. The tendency is that 15%-40% will progress to cirrhosis, and more than 90% of liver cancer patients in China have cirrhosis. Therefore, HBV infection, chronic hepatitis B, and cirrhosis to liver cancer are the main patterns of liver cancer in China. In recent years, through the vaccination of neonatal hepatitis B vaccine and the prevention and treatment of hepatitis B, liver cancer has shown a downward trend in the first generation, but the true manifestation of the effects of vaccines and other measures may take 10-20 years.
HBV感染后的治疗是一个长期漫长的过程,在这个过程中, 病情易出 现反复活动, 病变常成阶段性进展, 越晚越恶劣, 越晚越难治, 发生肝硬 化后, 抗病毒治疗也难完全防止其进一步发展, 而 HCC 更是恶性程度最 高的肿瘤之一, 病程短、 进展快、 预后极差, 5年生存率不到 10%。 因此, 对 HBV感染者的病情需要长期动态检测, 掌握患者的疾病状态和病情严 重程度, 对阶段性的进展更应及早诊断以确定针对性的防治方案, 最大限 度地长期抑制或消除 HBV,减轻肝细胞炎症坏死及肝纤维化,延緩和阻止 疾病进展, 减少和防止肝脏失代偿、 肝硬化、 原发性肝细胞癌及其并发症 的发生, 从而改善生活质量和延长存活时间。  The treatment after HBV infection is a long and long process. In this process, the disease is prone to repeated activities, and the lesions often progress in stages. The later the worse, the later the more difficult to treat, after the cirrhosis, antiviral treatment It is difficult to completely prevent its further development, and HCC is one of the most malignant tumors. It has a short course, rapid progress, and poor prognosis. The 5-year survival rate is less than 10%. Therefore, the condition of HBV-infected patients needs long-term dynamic detection, grasp the patient's disease state and severity of the disease, and should make early diagnosis to determine the targeted prevention and treatment plan to maximize the long-term inhibition or elimination of HBV. Hepatocyte inflammation and necrosis and liver fibrosis delay and prevent disease progression, reduce and prevent liver decompensation, cirrhosis, primary hepatocellular carcinoma and its complications, thereby improving quality of life and prolonging survival.
目前, 血清 HBV 标志物和曱胎蛋白 (AFP )是全世界应用最广泛的 HBV感染和 HCC生物标志物( Biomarker ) , 转氨酶则是反映肝脏损伤程 度的常用指标, 但它们难以反映 HBV感染相关疾病的动态进展情况, 对 相应疾病的早期诊断效果也越来越不能满足需要,如,随着影像学的发展, AFP阴性的病例被确诊为肝癌, 其诊断肝癌的敏感性仅为 40%-60%,特异 性为 70%-90%;针对肝硬化的诊断和病变程度判断则尚缺乏合适的生物标 志物。尽管目前国内外研究者正探索筛选新的生物标志物, 以对 AFP进行 有效的补充, 但是难以突破传统生物标志物发展和应用中的瓶颈, 即抗体 难以制备和定量检测困难。 Currently, serum HBV markers and adenines (AFP) are the most widely used HBV infections and HCC biomarkers (Biomarker) in the world, and transaminase reflects liver damage. Common indicators of degree, but they are difficult to reflect the dynamic progress of HBV infection-related diseases, and the early diagnosis of the corresponding diseases is increasingly unable to meet the needs. For example, with the development of imaging, AFP-negative cases are diagnosed as liver cancer. The sensitivity of diagnosing liver cancer is only 40%-60%, and the specificity is 70%-90%. The diagnosis of liver cirrhosis and the judgment of lesion degree still lack suitable biomarkers. Although researchers at home and abroad are exploring new biomarkers to effectively supplement AFP, it is difficult to break through the bottleneck in the development and application of traditional biomarkers, that is, it is difficult to prepare and quantitatively detect antibodies.
综上所述, HCC起病比较隐匿, 并且预后不良, 要加强 HBV感染者病 情的监控, 发现病情变化的早期指针, 就需要针对 HBV感染不同阶段, 获 得灵敏、特异、 易于检测的标志物。 另外, HBV感染和 HCC治疗效果有限, 要进行治疗效果的早期判断, 发现更多有效的治疗靶标, 进行靶向治疗就需 要动态监测 HBV感染和 HCC治疗的效果, 了解 HBV感染的自然史, HCC 发生和发展的分子机制, 获得易于调控的治疗靶标。 因此, 寻找一类新型的 特异性生物标志物是肝癌防治的当务之急。  In summary, HCC is relatively insidious and has a poor prognosis. To strengthen the monitoring of HBV-infected patients and to identify early indicators of disease changes, it is necessary to obtain sensitive, specific, and easily detectable markers for different stages of HBV infection. In addition, HBV infection and HCC treatment have limited effect. To judge the early effect of treatment, and find more effective therapeutic targets, targeted therapy requires dynamic monitoring of the effects of HBV infection and HCC treatment, and understand the natural history of HBV infection, HCC. The molecular mechanisms of occurrence and development gain access to easily modulating therapeutic targets. Therefore, finding a new class of specific biomarkers is a top priority for liver cancer prevention and treatment.
MicroRNA(miRNA)是近年的一个研究热点, 它是一类长约 19-23 个核 苷酸的单链 RNA 分子, 位于基因组非编码区, 进化上高度保守, 可在翻 译水平对基因表达进行调节 , 并与动物的许多正常生理活动,如生物个体 发育、 组织分化、 细胞凋亡以及能量代谢等密切相关, 同时也与许多疾病 的发生及发展存在着紧密的联系。自参与调控线虫时序发育的 lin-4与 let-7 被发现以来, microRNA已逐渐成为调控 mRNA稳定性和蛋白翻译的研究 热点, 分别在 2002年和 2003年两度入选 Science杂志年度十大科技突破。 现在预测 microRNA至少能调控 5300个人类基因,也就是所有基因的 30%。 随着研究的深入, 越来越多的 miRNA被发现, 其中, miRNA与肿瘤的关系 越来越成为研究的重点, 已经发现若干 miRNA通过负调控基因的表达与慢 性淋巴细胞性白血病、 肺癌、 乳腺癌、 结肠癌高度相关。 miRNA的正调控 靶基因现象是最近的发现, 具体机制还不明确。 有学者提出了 "癌 microRNA"(OncomiRs)的观点, 即认为某些 miRNA 的异常表达在肿瘤的 发生发展过程中充当了类似癌基因的角色。  MicroRNA (miRNA) is a research hotspot in recent years. It is a single-stranded RNA molecule of about 19-23 nucleotides in length. It is located in the non-coding region of the genome and is highly evolutionarily conserved. It can regulate gene expression at the translational level. And closely related to many normal physiological activities of animals, such as biological individual development, tissue differentiation, apoptosis and energy metabolism, and also closely related to the occurrence and development of many diseases. Since the discovery of lin-4 and let-7, which have been involved in the regulation of nematode timing, microRNAs have gradually become a research hotspot for regulating mRNA stability and protein translation. They were selected into Science Magazine's top ten technological breakthroughs in 2002 and 2003 respectively. . It is now predicted that microRNAs can regulate at least 5,300 human genes, or 30% of all genes. With the deepening of research, more and more miRNAs have been discovered. Among them, the relationship between miRNAs and tumors has become the focus of research. Several miRNAs have been found to express negatively regulated genes with chronic lymphocytic leukemia, lung cancer, and breast. Cancer and colon cancer are highly correlated. The positive regulation of miRNAs The phenomenon of target genes is a recent discovery, and the specific mechanism is still unclear. Some scholars have proposed the "cancer microRNA" (OncomiRs) view that the abnormal expression of certain miRNAs plays a similar oncogene role in the development of tumors.
肝癌, 特别是乙型肝炎相关性肝癌在我国的发病率高, 死亡率高,严重 危害人们的健康, 而乙型肝炎相关性肝癌目前尚无满意的治疗。国内外学者 对肝癌开展了广泛而深入的研究, 但乙肝病毒与肝癌发生发展的关系尚未 完全阐明。 近来研究表明 miRNA可能在肝癌发生与进展中发挥重要作用, 但是还没有关于血清 /血浆微小核糖核酸用于肝癌诊断与治疗方面的任何报 道。 Liver cancer, especially hepatitis B-related liver cancer, has a high incidence rate and high mortality in China, which seriously endangers people's health. However, there is no satisfactory treatment for hepatitis B-related liver cancer. Domestic and foreign scholars have carried out extensive and in-depth research on liver cancer, but the relationship between hepatitis B virus and the development of liver cancer has not been fully elucidated. Recent studies have shown that miRNA may play an important role in the development and progression of liver cancer, but there is no report on the use of serum/plasma microribonucleic acid for the diagnosis and treatment of liver cancer. Road.
在前期的研究中, 我们发现血清 /血浆中存在上百种的 microRNA, 性 质稳定、 含量丰富、 易于定量检测, 且存在显著的疾病特异性, 在肺癌、 结肠癌中已经证实血清 microRNA 的表达语可作为早期诊断的潜在生物标 志物, 并首次提出血清中微小核糖核酸作为全新的疾病检测指针(该发明 已经申请了专利) 。 这一发现令人振奋, 血清 microRNA作为一类非编码 调节性的小分子 RNA有可能取代传统的特异蛋白为代表的生物标志物,开 拓了生物标志物的新境界。 该研究迅速引起国际媒体的广泛关注, 路透社、 合众社、 《科学的美国人》 、 美国 《技术评论》 等都对该研究成果进行了 专门报道, 《自然》 (Nature )也在其网站首页的"最新研究进展 "专栏中展 示了这一来自中国的最新研究进展。因此若能筛选出 HBV感染引起的 HCC 特异血清 microRNA作为生物标志物, 并研制相应的疾病进展监测芯片, 不仅在该领域处于国际领先地位, 而且对我国 HBV感染相关疾病及 HCC 的防治现状必将是一次有力的推动。  In previous studies, we found that there are hundreds of microRNAs in serum/plasma, which are stable, abundant, and easy to quantify, and have significant disease specificity. Serum microRNA expression has been confirmed in lung cancer and colon cancer. It can be used as a potential biomarker for early diagnosis, and the microRNA in serum is first proposed as a new indicator for disease detection (the invention has been patented). This finding is inspiring. Serological microRNAs, as a class of non-coding regulatory small RNAs, have the potential to replace traditional biomarkers represented by specific proteins, opening up a new realm of biomarkers. The research quickly attracted widespread attention from the international media. Reuters, Hezhong, Scientific American, and the US Technical Review all reported on the research results. Nature is also on its website. The latest research progress from China is shown in the "Latest Research Progress" column of the homepage. Therefore, if we can screen out HCC-specific serum microRNAs caused by HBV infection as biomarkers and develop corresponding disease progression monitoring chips, it is not only an international leader in this field, but also the prevention and treatment of HBV infection-related diseases and HCC in China. It is a powerful push.
目前, 对 HBV感染引起的 HCC的诊断仅仅局限于血清 /血浆中的各种 生化指标, 以及传统医学和影像学手段, 还没有关于血清 /血浆微小核糖核 酸用于肝癌诊断与治疗方面的任何报道。 基于微小核糖核酸的这一发现, 本发明人将研究目光锁定在血清 /血浆微小核糖核酸在乙型肝炎引起的肝癌 诊断与治疗方面的重大应用前景。 因此希望通过本课题的顺利实施获得 HBV感染引起的 HCC特异性血清 microRNA表达数据库和肝癌特异标志 物,研制 HBV感染引起的 HCC的诊断试剂盒, 为 HBV相关疾病发生和进 展机制的研究提供数据支持; 通过血清 microRNA生物标志物和诊断试剂 盒的研制和应用, 使得 HBV感染引起的 HCC的早期诊断和动态监测方便 易行, 为临床医生快速准确掌握患者病情、 及时釆取更具个体化的防治方 案提供支持, 为后期临床应用效果评价奠定基础。 发明内容  At present, the diagnosis of HCC caused by HBV infection is limited to various biochemical indicators in serum/plasma, as well as traditional medical and imaging methods, and there is no report on the use of serum/plasma microRNA for diagnosis and treatment of liver cancer. . Based on this finding of microribonucleic acid, the present inventors will study the important application prospects of blood/plasma microribonucleic acid in the diagnosis and treatment of liver cancer caused by hepatitis B. Therefore, it is hoped that the HCC-specific serum microRNA expression database and liver cancer-specific markers caused by HBV infection can be obtained through the successful implementation of this subject, and a diagnostic kit for HCC caused by HBV infection can be developed to provide data support for the study of the occurrence and progression mechanism of HBV-related diseases. Through the development and application of serum microRNA biomarkers and diagnostic kits, the early diagnosis and dynamic monitoring of HCC caused by HBV infection is convenient and convenient, allowing clinicians to quickly and accurately grasp the patient's condition and timely obtain more individualized prevention and treatment. The program provides support and lays the foundation for the evaluation of clinical application effects in the later period. Summary of the invention
本发明人通过分离和研究正常人、 HBV携带者、 慢性乙肝患者、 丙肝 患者以及 HBV感染引起的肝癌患者血清中的微小核糖核酸,寻找一类可用 于 HBV感染相关疾病尤其是 HBV感染引起的肝癌早期诊断的高效率、 高 特异性和高敏感性的微小核糖核酸,并研制出可便于临床应用的 HBV感染 相关疾病尤其是 HBV感染引起的肝癌的早期诊断的监测试剂盒。为实现这 一目的, 本发明需要解决的问题包括: ( 1 )建立统一标准的标本库和数据 库: 以标准操作程序(SOP )釆集符合标准的血液样本, 系统收集完整的人 口学资料和临床资料。 ( 2 )血清 miRNA差异表达语分析: 选择健康个体、 乙肝表面抗原携带者、 慢性乙肝患者、 慢性丙肝患者和 HBV相关的肝癌患 者检测其血清 miRNA表达谱及含量, 分析不同人群血清 miRNA的共性和 特性, 筛选差异表达 miRNA以备进一步大样本独立验证。 (3 ) 筛选疾病 特异血清 miRNA: 对已筛选的血清差异表达 miRNA在大样本人群中进行 定量分析验证, 确定乙肝表面抗原携带者、 慢性乙肝患者、 慢性丙肝患者 和肝癌患者特异性血清 miRNA, 能够特异性指示肝癌发展的各个阶段, 反 映肝癌发生的动态变化。 ( 4 )血清 miRNA诊断试剂盒的研制: 根据 HBV 感染至肝癌发生各阶段特异血清 miRNA开发 miRNA诊断试剂盒, 该芯片 可以识别 HBV感染病人所处的发病阶段及病情严重程度, 实现肝癌早期诊 断的目的。 The present inventors search for a class of liver cancer caused by HBV infection-related diseases, especially HBV infection, by isolating and studying microRNAs in the serum of normal humans, HBV carriers, chronic hepatitis B patients, hepatitis C patients, and HBV-infected liver cancer patients. Early diagnosis of high-efficiency, high-specificity and high-sensitivity microRNAs, and the development of a diagnostic kit for the early diagnosis of liver cancer caused by HBV infection-related diseases, especially HBV infection. In order to achieve this, the problems to be solved by the present invention include: (1) Establishing a unified standard specimen library and data Library: A standard-compliant blood sample is collected using standard operating procedures (SOPs) and the system collects complete demographic data and clinical data. (2) Analysis of serum miRNA differential expression: Select healthy individuals, hepatitis B surface antigen carriers, chronic hepatitis B patients, chronic hepatitis C patients and HBV-related liver cancer patients to detect serum miRNA expression profiles and levels, and analyze the commonality of serum miRNAs in different populations. Characteristics, screening differentially expressed miRNAs for further large sample independent validation. (3) Screening for disease-specific serum miRNAs: Quantitative analysis of screened differentially expressed miRNAs in large sample populations to determine specific serum miRNAs in hepatitis B surface antigen carriers, chronic hepatitis B patients, chronic hepatitis C patients, and liver cancer patients. Specificity indicates the various stages of liver cancer development, reflecting the dynamic changes in liver cancer. (4) Development of serum miRNA diagnostic kit: According to HBV infection to specific stage of liver cancer, specific serum miRNA development miRNA diagnostic kit, the chip can identify the stage of the HBV infection patients and the severity of the disease, to achieve early diagnosis of liver cancer purpose.
为解决以上问题本发明人以标准操作程序 ( SOP )釆集符合标准的血液 样本, 系统收集完整的人口学资料和临床资料, 并釆用了 RT-PCR方法、 Real-time PCR方法、 Solexa sequencing technology以及生物芯片方法中的 一种或几种。  In order to solve the above problems, the inventors collected standard blood samples by standard operating procedures (SOPs), systematically collected complete demographic data and clinical data, and employed RT-PCR methods, Real-time PCR methods, and Solexa sequencing. One or more of technology and biochip methods.
具体来说研究的实验方法主要包括以下几个部分:  Specifically, the experimental methods of research mainly include the following parts:
1.样品分选及归类方法 1. Sample sorting and classification method
Group A: 健康对照组(n=80 )  Group A: healthy control group (n=80)
( 1 ) 乙肝表面抗体、 乙肝表面抗原和乙肝核心抗体阴性  (1) Hepatitis B surface antibody, hepatitis B surface antigen and hepatitis B core antibody negative
( 2 ) 丙肝抗体和 /或丙肝 RNA阴性  (2) Hepatitis C antibody and / or hepatitis C RNA negative
( 3 ) ALT<40IU/L,AST<45IU/L  (3) ALT<40IU/L, AST<45IU/L
( 4 ) 没有其它系统性疾病  (4) No other systemic diseases
( 5 )年龄≥20  (5) Age ≥ 20
Group B: 病毒清除者 (n=80 )  Group B: Virus Cleaner (n=80)
( 1 ) 乙肝表面抗原阴性和 /或 HBV-DNA 阴性, 乙肝表面抗体和乙肝核 心抗体阳性并且没有疫苗注射历史  (1) Hepatitis B surface antigen negative and / or HBV-DNA negative, hepatitis B surface antibody and hepatitis B core antibody positive and no vaccine injection history
( 2 ) 丙肝抗体和 /或丙肝 RNA阴性  (2) Hepatitis C antibody and / or hepatitis C RNA negative
( 3 ) ALT<40IU/L,AST<45IU/L  (3) ALT<40IU/L, AST<45IU/L
( 4 ) 没有其它系统性疾病  (4) No other systemic diseases
( 5 )年龄≥20  (5) Age ≥ 20
Group N: 对照组( n=60 ) Group A和 Group B的整合  Group N: Control group (n=60) Integration of Group A and Group B
Group C: 持续性无症状 HBV感染者 ( n=55 ) (1) 乙肝表面抗原和核心抗体阳性 Group C: persistent asymptomatic HBV infection (n=55) (1) Hepatitis B surface antigen and core antibody positive
( 2 ) 丙肝抗体和 /或丙肝 RNA阴性  (2) Hepatitis C antibody and / or hepatitis C RNA negative
( 3 ) ALT<40IU/L,AST<45IU/L  (3) ALT<40IU/L, AST<45IU/L
(4) 没有肝炎临床症状  (4) No clinical symptoms of hepatitis
(5) 没有肝硬化临床迹象  (5) No clinical signs of cirrhosis
(6) 没有其它系统性疾病  (6) No other systemic diseases
( 7 )年龄≥20  (7) Age ≥ 20
Group D: 慢性乙肝患者 (n=80) Group D: Chronic hepatitis B patients (n=80)
( 1 ) 乙肝表面抗原和乙肝核心抗体阳性至少 6个月  (1) Hepatitis B surface antigen and hepatitis B core antibody are positive for at least 6 months
( 2 ) 丙肝抗体和 /或丙肝 RNA阴性  (2) Hepatitis C antibody and / or hepatitis C RNA negative
( 3 ) ALT和 /或 AST水平高于正常值的两倍  (3) ALT and / or AST levels are more than twice the normal value
(4) 没有肝硬化临床迹象  (4) No clinical signs of cirrhosis
(5) 没有其它系统性疾病  (5) No other systemic diseases
( 6 )年龄≥20  (6) Age ≥ 20
Group HBV: HBV组 ( n=135 ) Group C和 Group D的整合 Group HBV: HBV Group (n=135) Integration of Group C and Group D
Group HBV-HCC: HBV相关的肝细胞癌 ( n=65 ) Group HBV-HCC: HBV-associated hepatocellular carcinoma (n=65)
(1) 乙肝表面抗原和乙肝核心抗体阳性  (1) Hepatitis B surface antigen and hepatitis B core antibody positive
( 2 ) 丙肝抗体和 /或丙肝 RNA阴性  (2) Hepatitis C antibody and / or hepatitis C RNA negative
(3)组织切片检查确诊为肝细胞癌  (3) Histopathological examination confirmed hepatocellular carcinoma
(4)年龄≥40  (4) Age ≥ 40
Group HCV: 慢性丙肝患者 ( n=48 )  Group HCV: Chronic hepatitis C patients (n=48)
( 1 ) 丙肝抗体和 /或丙肝 RNA阳性  (1) Hepatitis C antibody and / or hepatitis C RNA positive
(2) 乙肝表面抗原阴性  (2) Hepatitis B surface antigen negative
( 3 ) ALT和 /或 AST水平高于正常值的两倍  (3) ALT and / or AST levels are more than twice the normal value
(4) 没有肝硬化临床迹象  (4) No clinical signs of cirrhosis
(5) 没有其它系统性疾病  (5) No other systemic diseases
( 6 )年龄≥20  (6) Age ≥ 20
2. Trizol Reagent (Invitrogen, Carlsbad, CA)提取血清总 RNA  2. Trizol Reagent (Invitrogen, Carlsbad, CA) extracts total serum RNA
( 1 )取 80- 100ml的血清, 加入等体积的 Trizol Reagent  (1) Take 80-100ml of serum and add an equal volume of Trizol Reagent
(2)相分离  (2) Phase separation
室温放置 15min, 然后按 0.2ml了氯仿 /lml Trizol Reagent的体积 比加入氯仿, 教育列震荡 15s, 室温 15min, 12,000g, 4°C,离心 15min ( 3 )将水相转移到新的 50ml的离心管, 3步苯酚 /氯仿除去蛋白相 ( 4 ) RNA沉淀 Leave at room temperature for 15 min, then add chloroform according to the volume ratio of 0.2 ml chloroform / 1 ml Trizol Reagent. The education column is shaken for 15 s, room temperature for 15 min, 12,000 g, 4 ° C, centrifuge for 15 min. (3) Transfer the aqueous phase to a new 50 ml centrifuge tube, 3 steps of phenol/chloroform to remove the protein phase (4) RNA precipitation
将水相转移到新的离心管中 , 按 0.5ml异丙醇 /lml Trizol Reagent 体积加入异丙醇, -20°C保存 60min, 12,000g, 4°C ,离心 60min ( 5 )用 lml Trizol重悬沉淀, 将悬液转移到新的 1.5ml的离心管中 Transfer the aqueous phase to a new centrifuge tube, add isopropanol in a volume of 0.5 ml isopropanol / 1 ml Trizol Reagent, store at -20 ° C for 60 min, 12,000 g, 4 ° C, centrifuge for 60 min ( 5 ) with 1 ml Trizol Suspend the pellet and transfer the suspension to a new 1.5 ml centrifuge tube.
( 6 )重复 2, 4步 (第四步离心改为 15min ) (6) Repeat steps 2 and 4 (the fourth step is changed to 15 minutes)
( 7 ) RNA洗涤 (7) RNA washing
去掉上清, 加入 75%乙醇, 12,000g, 4°C离心 5min  Remove the supernatant, add 75% ethanol, 12,000g, centrifuge at 5 ° C for 5min
( 8 )测量浓度 (8) Measuring concentration
通常能得到 5〜10 μg RNA/ 50-100 ml血清  Usually get 5~10 μg RNA/ 50-100 ml serum
3. Solexa测序  3. Solexa sequencing
( 1 ) 总 RNA进行 PAGE电泳回收 17-27nt RNA分子  (1) Total RNA was recovered by PAGE to recover 17-27nt RNA molecules.
( 2 )将 adaptor prime酶联在小 RNA分子的 3'与 5'端  (2) Enzyme adaptor prime to the 3' and 5' ends of small RNA molecules
( 3 )进行 RT-PCR反应后并进行测序  (3) After RT-PCR reaction and sequencing
( 4 )数据分析与处理  (4) Data analysis and processing
4. Real-time PCR方法  4. Real-time PCR method
( 1 )取受试者的血清 /血浆总 RNA,通过 RNA逆转录反应得到 cDNA 样品; 或者收集受试者的血清 /血浆样本, 以血清 /血浆作为緩 冲液进行逆转录反应来制备 cDNA样品;  (1) taking the serum/plasma total RNA of the subject, and obtaining a cDNA sample by reverse transcription reaction of RNA; or collecting serum/plasma samples of the subject, and performing reverse transcription reaction using serum/plasma as a buffer to prepare a cDNA sample. ;
( 2 )用微小核糖核酸设计引物;  (2) designing primers using microRNAs;
( 3 )加入荧光探针进行 PCR反应;  (3) adding a fluorescent probe for PCR reaction;
( 4 )检测并比较正常人、 乙肝携带者、 乙肝患者血清 /血浆样本中微 小核糖核酸的量的变化。  (4) Detect and compare changes in the amount of microRNA in serum/plasma samples of normal, hepatitis B carriers, and hepatitis B patients.
5. 诊断试剂盒制备方法  5. Diagnostic kit preparation method
Solexa方法确定正常人和病人血清中有 50个以上拷贝的微小核 糖核酸。然后通过定量 PCR技术和生物芯片技术筛选在疾病及正常生 理状态下表达量和差异程度大的一类血清 /血浆微小核糖核酸,作为预 测是否发生肝癌和 HBV相关的其它疾病以及诊断病变程度的指标。 最后筛选出的对应肝癌和 HBV相关疾病的血清 小核糖核酸的数量 控制在几至十几条, 这是在芯片探针库的基础上做出的最优化的精 简。 诊断试剂盒包括一批血清微小核糖核酸引物, Taq酶、 dNTP 等 试剂。  The Solexa method determines more than 50 copies of microRNA in normal and patient sera. Then, by using quantitative PCR technology and biochip technology, a class of serum/plasma microRNAs with large expression and degree of difference under disease and normal physiological conditions is screened as an index for predicting whether liver cancer and other diseases associated with HBV occur and the degree of disease diagnosis. . The final screening of the number of serum ribonucleic acids corresponding to liver cancer and HBV-related diseases is controlled in the order of a few to a dozen, which is an optimized reduction based on the chip probe library. The diagnostic kit includes a batch of serum microRNA primers, Taq enzymes, dNTPs and other reagents.
根据上述 Solexa测序方法本发明人检测到的存在差异表达的正常人和 慢性乙肝患者血清 /血浆中的微小核糖核酸包括 let-7c、 miR-l、 miR-10a、 miR-122、 miR-125b、 miR-128a、 miR-128b、 miR-150, miR-197、 miR-221 , miR-222 , miR-223、 miR-23a、 miR-23b、 miR-27a、 miR-27b、 miR-30a、 miR-342-3p、 miR-361-5p、 miR-423-5p、 miR-532-5p、 miR-574-3p、 miR-629、 miR-92a、 miR-92b、 miR-99a、 miR-139-5p、 miR-193a-5p、 miR-193b、 miR-365、 miR-375 , miR-455-3p、 miR-483-3p、 miR-483-5p、 miR-486-3p、 miR-885-5p、 miR-99b、 let-7f、 let-7g、 let-7i、 miR-101、 miR-103、 miR-106a、 miR-106b、 miR-107、 miR- 126、 miR- 130a、 miR-130b、 miR-142-3p、 miR-142-5p、 miR-144、 miR-146a、 miR-146b-5p、 miR- 148b, miR-151-5p、 miR- 15a, miR-16、 miR- 17 , miR- 182 , miR- 183 , miR- 185 , miR- 186 , miR- 18a, miR-191、 miR- 19b , miR-20a、 miR-20b、 miR-21、 miR-210, miR-26a、 miR-26b、 miR-29c、 miR-30e、 miR-340、 miR-362-5p、 miR-363、 miR-374a、 miR-378、 miR-424、 miR-451、 miR-454、 miR-532-5p、 miR-652 , miR-660、 miR-7、 miR-923、 miR-93、 miR-96、 miR-98。 According to the above Solexa sequencing method, the inventors detected differentially expressed normal persons and The ribonucleic acids in serum/plasma of patients with chronic hepatitis B include let-7c, miR-1, miR-10a, miR-122, miR-125b, miR-128a, miR-128b, miR-150, miR-197, miR- 221 , miR-222 , miR-223, miR-23a, miR-23b, miR-27a, miR-27b, miR-30a, miR-342-3p, miR-361-5p, miR-423-5p, miR- 532-5p, miR-574-3p, miR-629, miR-92a, miR-92b, miR-99a, miR-139-5p, miR-193a-5p, miR-193b, miR-365, miR-375, miR-455-3p, miR-483-3p, miR-483-5p, miR-486-3p, miR-885-5p, miR-99b, let-7f, let-7g, let-7i, miR-101, miR-103, miR-106a, miR-106b, miR-107, miR-126, miR-130a, miR-130b, miR-142-3p, miR-142-5p, miR-144, miR-146a, miR- 146b-5p, miR-148b, miR-151-5p, miR-15a, miR-16, miR-17, miR-182, miR-183, miR-185, miR-186, miR- 18a, miR-191, miR-19b, miR-20a, miR-20b, miR-21, miR-210, miR-26a, miR-26b, miR-29c, miR-30e, miR-340, miR-362-5p, miR-363, miR-374a, miR-378, miR-424, miR-451, miR-454, miR-532-5p, miR-652, miR-660, miR-7, miR-923, miR-93, miR-96, miR-98.
本发明人证明了正常对照者和病毒清除者之间、 慢性乙肝患者和 HBV 携带者之间血清 microRNAs的表达无显著性差异, 并将正常对照者和病毒 清除者整合为对照组, 将慢性乙肝患者和 HBV携带者整合为 HBV组。 具 体实施方法是:  The present inventors demonstrated that there was no significant difference in the expression of serum microRNAs between normal controls and virus removers, between chronic hepatitis B patients and HBV carriers, and that normal controls and virus scavengers were integrated into a control group, chronic hepatitis B Patients and HBV carriers were integrated into the HBV group. The specific implementation method is:
根据上述 Solexa结果, 选择在慢性乙肝患者中的拷贝数是健康对照者 中拷贝数的 20倍的 microRNAs作为本发明中初步筛查的血清 markers , 并 且这些 microRNAs在慢性乙肝患者中的拷贝数都大于 50拷贝,由于技术操 作问题, 舍弃了 miR-221 和 miR-629。  According to the above Solexa results, microRNAs whose copy number in chronic hepatitis B patients is 20 times the copy number in healthy controls are selected as serum markers for preliminary screening in the present invention, and the copy number of these microRNAs in chronic hepatitis B patients is larger than 50 copies, due to technical operation problems, abandoned miR-221 and miR-629.
根据上述 real-time PCR方法, 本发明人在 30例正常对照 (用 Solexa 测序的样品)、 30例病毒清除者、 30例慢性乙肝患者(用 Solexa测序的样 品 )和 30例无症状 HBV感染者血清中成功检测了如下 13个 microRNAs: miR- 122a , miR-423、 miR-92a、 let-7c、 miR-23a、 miR-23b、 miR-223、 miR-342-3p、 miR-375 , miR-99a、 miR- 150、 miR- 125b、 miR- 10a„  According to the above real-time PCR method, the inventors performed 30 normal controls (samples sequenced with Solexa), 30 virus scavengers, 30 chronic hepatitis B patients (samples sequenced with Solexa), and 30 asymptomatic HBV infected persons. The following 13 microRNAs were successfully detected in serum: miR-122a, miR-423, miR-92a, let-7c, miR-23a, miR-23b, miR-223, miR-342-3p, miR-375, miR- 99a, miR- 150, miR- 125b, miR-10a
分析结果, 本发明人发现正常对照者和病毒清除者之间、 慢性乙肝患 者和 HBV携带者之间这 13个 microRNAs的表达无显著性差异, 因此, 将 正常对照者和病毒清除者整合为对照组,将慢性乙肝患者和 HBV携带者整 合为 HBV组。  As a result of the analysis, the present inventors found that there was no significant difference in the expression of the 13 microRNAs between the normal control and the virus remover, between the chronic hepatitis B patients and the HBV carriers, and therefore, the normal controls and the virus scavengers were integrated into the control. Group, chronic hepatitis B patients and HBV carriers were integrated into the HBV group.
本发明人还证明了所选择的 13个 microRNAs可以将对照组、慢性丙肝 感染者和 HBV组分开, 具体实施方法是: 进一步检测 HBV的特异性表达语, 用上述 real-time PCR方法检测了 这 13个 microRNAs在 30例慢性丙肝患者血清中的表达情况, 结果发现慢 性丙肝感染者可以和 HBV组分开。 The inventors have also demonstrated that the selected 13 microRNAs can open the control group, the chronic hepatitis C infected person and the HBV component, and the specific implementation method is: Further detection of the specific expression of HBV, the above-mentioned real-time PCR method was used to detect the expression of these 13 microRNAs in the serum of 30 patients with chronic hepatitis C, and found that chronic hepatitis C infection can be combined with HBV components.
进一步确认这 13个 microRNAs可以将慢性丙肝感染者和 HBV组分开, 检测比较这 13个 microRNAs在 100例对照组 ( 50例健康对照和 50例病毒 清除者) 、 75个 HBV组 ( 25例 HBV携带者和 50例慢性乙肝患者 )和 18 例慢性丙肝患者中的表达情况, 用 Cluster3.0聚类分析, 这 193例样品确实 可被分为三大类: 对照组、 HBV组和 HCV组, 正常对照者和病毒清除者 之间、 慢性乙肝患者和 HBV携带者之间确实无显著性差异。  It was further confirmed that these 13 microRNAs could be used to detect chronic hepatitis C infection and HBV components. The 13 microRNAs were compared in 100 control groups (50 healthy controls and 50 virus removers) and 75 HBV groups (25 HBV carriers). The expression in clusters of patients with chronic hepatitis B and 18 patients with chronic hepatitis C, cluster analysis using Cluster 3.0, these 193 samples can be divided into three categories: control group, HBV group and HCV group, normal There was indeed no significant difference between the control and the virus remover, between the chronic hepatitis B patients and the HBV carriers.
在上述结果的基础上, 本发明人用聚类分析方法还证明了所选择的 13 个 markers中的 6个 microRNAs: miR-375 , miR-92a、 miR-10a、 miR-223、 miR-423-5 和 miR-99a就能将对照组、 HBV组和 HCV组 3个组区分开来, 160例对照组只有 2例、 135例 HB V组中只有例个被错误的归类, 而 HC V 组中没有一例被错误归类。  Based on the above results, the inventors also demonstrated six microRNAs among the selected 13 markers by cluster analysis: miR-375, miR-92a, miR-10a, miR-223, miR-423- 5 and miR-99a can distinguish the control group, the HBV group and the HCV group. There are only 2 cases in the 160 control group and only 135 cases in the HB V group are incorrectly classified, while the HC V group None of the cases were classified as errors.
在上述一系列研究结果的基础上, 本发明人最后证明了所选择的 13个 markers中的 8个 microRNAs: miR-23b、 miR-423-5p、 miR-375, miR-23a、 miR-342-3p、 miR-10a、 miR-125b、 miR-92a就可以将 HBV-HCC组与 HBV 组和对照组分开。 具体实施方法是:  Based on the results of the above series of studies, the inventors finally demonstrated 8 microRNAs among the 13 selected markers: miR-23b, miR-423-5p, miR-375, miR-23a, miR-342- 3p, miR-10a, miR-125b, miR-92a can separate the HBV-HCC group from the HBV group and the control group. The specific implementation method is:
搜集 65例 HBV相关的 HCC患者的血清进行上述的 real-time PCR检 测, real-time PCR结果与上述的对照组结果、 HBV组结果进行聚类分析, 结果显示 8 个 microRNAs: miR-23b、 miR-423-5p、 miR-375 , miR-23a、 miR-342-3p、 miR-10a、 miR-125b、 miR-92a就可以将 HBV-HCC组与 HBV 组和对照组分开, 160例对照组中只有例个、 135例 HBV组中只有 2例被 错误归类, 而 HBV-HCC组中没有一例被错误归类。  The sera of 65 HBV-related HCC patients were collected for real-time PCR. The real-time PCR results were clustered with the above control results and HBV results. The results showed that 8 microRNAs: miR-23b, miR -423-5p, miR-375, miR-23a, miR-342-3p, miR-10a, miR-125b, miR-92a can separate the HBV-HCC group from the HBV group and the control group, 160 control groups Only 2 of the 135 HBV groups were misclassified, and none of the HBV-HCC groups were misclassified.
另外, 本发明人还提供了单个或多个标志物低表达或高表达区分 4组 样品( Group N、 Group HBV, Group HCV, Group HBV-HCC )的诊断能力, 具体实施方法和结果如下:  In addition, the inventors have also provided the diagnostic ability of low-expression or high-expression single or multiple markers to distinguish four groups of samples (Group N, Group HBV, Group HCV, Group HBV-HCC), and the specific implementation methods and results are as follows:
对正常对照组( Group N ) 、 HBV组( Group HBV ) 、 HCV组(Group HCV )和 HBV-HCC组( Group HBV-HCC )样品的 real-time PCR结果进行 风险评分, 以每个 microRNA表达量的 5%或 95 %的参考区间为风险值,通 过绘制 ROC 曲线来评估预测的灵敏性和特异性, 进而评估单个或多个 microRNAs低表达或高表达在肝癌早期诊断中的诊断能力。 ROC分析结果 显示, miR-375, miR-10a、 miR-223 ( miR-122a或 miR-342-3p ) 、 miR-423 以 100%的 AUC ( ROC曲线下面积)将对照组和 HBV组分开, miR-92a和 miR-423-5 以 99.6%的 AUC 将对照组和 HCV 组分开, miR-23b、 miR-423-5p、 miR-375, miR-23a和 miR-342-3p以 99.9%的 AUC将对照组 和 HCC组分开,而 miR-375和 miR-92a将 HBV组和 HCV组分开, miR-10a 和 miR-92a将 HBV组和 HCC组分开。 当用 miR-375、 miR-10a、 miR-223 和 miR-423-5p 4个 markers来区分对照组和 HBV组时, AUC为 99.9士 0.1%, 灵敏度为 99.3%, 特异性为 98.8%。 当用 miR-92a、 miR-423-5p 2个 markers 来区分对照组和 HCV组时, AUC为 99.6士 0.4%, 灵敏度为 97.9%, 特异性 为 99.4%。 同样地, 当用 miR-23b、 miR-423-5p、 miR-375、 miR-23a 和 miR-342-3p 5 个 markers 来区分对照组和 HBV-HCC 组时, AUC 为 99.9%士 0.1%,灵敏度为 96.9%,特异性为 99.4%,而当用 miR-10a和 miR-125b 区分 HBV组和 HBV-HCC组时, AUC为 99.2%, 灵敏度为 98.5%, 特异性 为 98.5%。 Risk-scores of real-time PCR results for normal control (Group N), HBV (Group HBV), HCV (Group HCV), and HBV-HCC (Group HBV-HCC) samples, expressed as microRNA per microRNA The 5% or 95% reference interval is the risk value, and the ROC curve is used to evaluate the sensitivity and specificity of the prediction, thereby assessing the ability of low or high expression of single or multiple microRNAs in the early diagnosis of liver cancer. ROC analysis showed that miR-375, miR-10a, miR-223 (miR-122a or miR-342-3p), miR-423 The control and HBV fractions were opened with 100% AUC (area under the ROC curve), miR-92a and miR-423-5 were separated from the HCV group by 99.6% AUC, miR-23b, miR-423-5p , miR-375, miR-23a and miR-342-3p open the control and HCC components with 99.9% AUC, while miR-375 and miR-92a open HBV and HCV components, miR-10a and miR-92a The HBV group and the HCC component were opened. When miR-375, miR-10a, miR-223 and miR-423-5p 4 markers were used to distinguish the control group from the HBV group, the AUC was 99.9 ± 0.1%, the sensitivity was 99.3%, and the specificity was 98.8%. When miR-92a, miR-423-5p 2 markers were used to distinguish the control group from the HCV group, the AUC was 99.6 ± 0.4%, the sensitivity was 97.9%, and the specificity was 99.4%. Similarly, when miR-23b, miR-423-5p, miR-375, miR-23a and miR-342-3p 5 markers were used to distinguish the control group from the HBV-HCC group, the AUC was 99.9% ± 0.1%. The sensitivity was 96.9% and the specificity was 99.4%. When the HBV group and the HBV-HCC group were distinguished by miR-10a and miR-125b, the AUC was 99.2%, the sensitivity was 98.5%, and the specificity was 98.5%.
根据上述诊断试剂盒制备方法和上述一系列实验结果, 本发明人还制 备了一种能用于肝癌早期诊断的诊断试剂盒, 所述诊断试剂盒包含测定受 试者血清 /血浆中稳定存在且可检测的成熟 miR-375、 miR-92a、 miR-10a、 miR-223、 miR-423-5p、 miR-23b、 miR-23a、 miR-342-3p、 miR-99a、 miR-125b 的引物和工具。  According to the above diagnostic kit preparation method and the above series of experimental results, the inventors have also prepared a diagnostic kit which can be used for early diagnosis of liver cancer, and the diagnostic kit comprises a stable presence in the serum/plasma of the subject. Primers for detection of mature miR-375, miR-92a, miR-10a, miR-223, miR-423-5p, miR-23b, miR-23a, miR-342-3p, miR-99a, miR-125b tool.
具体而言, 上述 microRNAs组合、 方法、 诊断试剂盒可用于 HBV相 关的肝癌和 HBV感染的早期诊断和动态监测, 为临床医生快速准确掌握患 者的疾病状态和病情严重程度、 及时釆取更具个性化的防治方案提供支持, 从而最大限度地长期抑制或消除 HBV, 减轻肝细胞炎症坏死及肝纤维化, 延緩和阻止疾病进展, 减少和防止肝脏失代偿、 肝硬化、 原发性肝细胞癌及 其并发症的发生, 从而改善生活质量和延长存活时间。  Specifically, the above microRNAs combination, method, and diagnostic kit can be used for early diagnosis and dynamic monitoring of HBV-related liver cancer and HBV infection, for the clinician to quickly and accurately grasp the patient's disease state and severity, and to obtain more personality in time. Supported by a controlled regimen to minimize or eliminate HBV, reduce hepatic inflammatory necrosis and liver fibrosis, delay and prevent disease progression, reduce and prevent liver decompensation, cirrhosis, and primary hepatocellular carcinoma And its complications occur to improve quality of life and prolong survival.
本发明还为血清 microRNA生物标志物和监测试剂盒推向临床应用提 供了理论基础, 为发现其它疾病病情变化的早期指针、 进行疾病治疗效果的 早期判断、 发现疾病更有效的治疗靶标、 阐明疾病发生和发展的分子机制提 供了理论基础和技术支持。  The invention also provides a theoretical basis for the clinical application of serum microRNA biomarkers and monitoring kits, to find early indicators of changes in other diseases, to make early judgments on the therapeutic effects of diseases, to find more effective therapeutic targets for diseases, and to clarify diseases. The molecular mechanisms of occurrence and development provide theoretical basis and technical support.
综上所述, microRNA作为 HBV相关的肝癌和 HBV感染早期诊断标 志物的优越性在于: ( 1 )血清 miRNA是一种新型生物标志物, 区别于传统 生物标志物, 不仅稳定、 微创、 易于检测, 且定量精确, 将大大提高疾病诊 断的敏感性和特异性, 该类小分子 RNA生物标志物的成功开发是对以蛋白 为主的传统生物标志物的颠覆,将为 HBV相关的肝癌和 HBV感染的防治开 创全新局面, 为其他疾病生物标志物的研制提供借鉴。 (2 )血清 miRNA监 测试剂盒是一种系统、 全面的诊断试剂盒, 血清 miRNA监测试剂盒能够明 确 HBV相关的肝癌患者疾病进展情况, 全面的反映患者的疾病状态, 避免 既往繁杂检测, 节约了成本和时间, 为临床医生快速准确掌握患者病情、 及 时釆取更具个性化的防治方案提供支持。 (3 )釆用严密、 多阶段的验证和 评价体系, 本发明人初期釆用 Solexa测序技术对血清 miRNA的进行直接测 序以获取疾病特异的血清 miRNA表达语, 并应用 q-PCR的方法在大样本进 行独立验证; 对血清 miRNA标志物和诊断试剂盒在现有的病人资源中进行 初步效果评价, 而后应用两个大样本前瞻性随访队列进行评估, 以上方法和 策略的应用加速和保证了血清 miRNA生物标志物和诊断试剂盒在临床上的 应用, 也为其他疾病生物标志物的研制提供方法和策略上的借鉴。 In summary, the advantages of microRNA as an early diagnostic marker for HBV-associated liver cancer and HBV infection are: (1) Serum miRNA is a novel biomarker that is not only stable, minimally invasive, and easy to distinguish from traditional biomarkers. Detection, and quantitative accuracy, will greatly improve the sensitivity and specificity of disease diagnosis. The successful development of this kind of small molecule RNA biomarkers is the subversion of traditional protein-based biomarkers, which will be HBV-related liver cancer and Prevention and treatment of HBV infection Create a new situation and provide reference for the development of biomarkers for other diseases. (2) The serum miRNA monitoring kit is a systematic and comprehensive diagnostic kit. The serum miRNA monitoring kit can clarify the disease progression of HBV-related liver cancer patients, comprehensively reflect the patient's disease state, avoid the complicated detection, and save the economy. Cost and time, support clinicians to quickly and accurately grasp the patient's condition and timely access to more personalized prevention and treatment programs. (3) Using a rigorous, multi-stage validation and evaluation system, the inventors initially used Solexa sequencing technology to directly sequence serum miRNAs to obtain disease-specific serum miRNA expressions, and applied q-PCR methods in large The samples were independently validated; serum miRNA markers and diagnostic kits were evaluated for initial efficacy in existing patient resources, and then two large prospective follow-up cohorts were used for evaluation. The application of the above methods and strategies accelerated and ensured serum. The clinical application of miRNA biomarkers and diagnostic kits also provides methods and strategies for the development of biomarkers for other diseases.
总之, 使用血清 /血浆微小核糖核 S史检测技术可以早期确诊 HBV相关 的肝癌和 HBV感染 , 这种新的 HBV相关的肝癌和 HBV感染的血清 /血 浆标记物不仅为人们在分子水平上全面了解肝癌的发生、 发展机理提供了 物质基础, 也加速了肝癌了临床疾病诊断学和治疗学的进步。 当然, 早期 检测肝癌的诊断试剂盒的有效性还有待进一步的临床验证。 但是, 基于 microRNA作为 HBV相关的肝癌和 HBV感染早期诊断标志物的优越 性, 相信不久的将来, 对肝癌的血清 /血浆微小核糖核酸诊断技术将会成 为肝癌早期诊断的一种新技术而被临床医生所应用, 便于临床医生对病人 做出及时有效的个体化治疗, 征服肝癌不再是梦想。 附图的简要说明  In conclusion, the use of serum/plasma microribonucleoside S-history detection technology can early diagnose HBV-associated liver cancer and HBV infection. This new HBV-associated serum/plasma marker for liver cancer and HBV infection is not only comprehensively understood at the molecular level. The mechanism of the occurrence and development of liver cancer provides a material basis and accelerates the progress of clinical disease diagnosis and therapeutics in liver cancer. Of course, the effectiveness of early diagnostic kits for detecting liver cancer remains to be further clinically validated. However, based on the superiority of microRNA as an early diagnostic marker for HBV-associated liver cancer and HBV infection, it is believed that in the near future, serum/plasma microribonucleic acid diagnostic technology for liver cancer will become a new technology for early diagnosis of liver cancer. The doctor's application makes it easy for clinicians to make timely and effective individualized treatment for patients. Conquering liver cancer is no longer a dream. BRIEF DESCRIPTION OF THE DRAWINGS
图 1显示以 hsa-miR-122a、 hsa-miR-423-5p、 hsa-miR-92a、 hsa-let-7c、 hsa-miR-23a、 hsa-miR-23b、 hsa-miR-223、 hsa-miR-342-3p、 hsa-miR-375、 hsa-miR-99a、 hsa-miR-150 , hsa-miR-125b、 hsa-miR-lOa 13个 microRNAs 作为 markers时对健康对照者(A )和病毒清除者(B )进行聚类分析的结 果。  Figure 1 shows hsa-miR-122a, hsa-miR-423-5p, hsa-miR-92a, hsa-let-7c, hsa-miR-23a, hsa-miR-23b, hsa-miR-223, hsa- miR-342-3p, hsa-miR-375, hsa-miR-99a, hsa-miR-150, hsa-miR-125b, hsa-miR-lOa 13 microRNAs as markers against healthy controls (A) and viruses The scavenger (B) performs the results of the cluster analysis.
图 2显示以 hsa-miR-122a、 hsa-miR-423-5p、 hsa-miR-92a、 hsa-let-7c、 hsa-miR-23a、 hsa-miR-23b、 hsa-miR-223、 hsa-miR-342-3p、 hsa-miR-375、 hsa-miR-99a、 hsa-miR-150 , hsa-miR-125b、 hsa-miR- 10a 13个 microRNAs 作为 markers时对无症状 HBV携带者 (C ) 和慢性乙肝患者 (D ) 进行聚 类分析的结果。  Figure 2 shows hsa-miR-122a, hsa-miR-423-5p, hsa-miR-92a, hsa-let-7c, hsa-miR-23a, hsa-miR-23b, hsa-miR-223, hsa- miR-342-3p, hsa-miR-375, hsa-miR-99a, hsa-miR-150, hsa-miR-125b, hsa-miR- 10a 13 microRNAs as markers for asymptomatic HBV carriers (C) The results of cluster analysis were performed with chronic hepatitis B patients (D).
图 3显示以 hsa-miR-122a、 hsa-miR-423-5p、 hsa-miR-92a、 hsa-let-7c、 hsa-miR-23a、 hsa-miR-23b、 hsa-miR-223、 hsa-miR-342-3p、 hsa-miR-375、 hsa-miR-99a、 hsa-miR- 150, hsa-miR- 125b, hsa-miR- 10a 13个 microRNAs 作为 markers时对健康对照者( A )、病毒清除者( B )、慢性丙肝患者( HCV)、 无症状 HBV感染者 (C) 和慢性乙肝患者 (D) 进行聚类分析的结果。 Figure 3 shows hsa-miR-122a, hsa-miR-423-5p, hsa-miR-92a, hsa-let-7c, hsa-miR-23a, hsa-miR-23b, hsa-miR-223, hsa-miR-342-3p, hsa-miR-375, hsa-miR-99a, hsa-miR-150, hsa-miR-125b, hsa-miR- 10a 13 microRNAs as markers for healthy controls (A), viral scavengers (B), chronic hepatitis C patients (HCV), asymptomatic HBV-infected patients (C), and chronic hepatitis B patients (D) The result of the class analysis.
图 4显示以 hsa-miR-122a、 hsa-miR-423-5p、 hsa-miR-92a、 hsa-let-7c、 hsa-miR-23a、 hsa-miR-23b、 hsa-miR-223、 hsa-miR-342-3p、 hsa-miR-375、 hsa-miR-99a、 hsa-miR- 150, hsa-miR- 125b, hsa-miR- 10a 13个 microRNAs 作为 markers时对正常对照组(N) 、 慢性丙肝病人组(HCV)和 HBV组 ( HBV ) 进行聚类分析的结果。  Figure 4 shows hsa-miR-122a, hsa-miR-423-5p, hsa-miR-92a, hsa-let-7c, hsa-miR-23a, hsa-miR-23b, hsa-miR-223, hsa- miR-342-3p, hsa-miR-375, hsa-miR-99a, hsa-miR-150, hsa-miR-125b, hsa-miR- 10a 13 microRNAs as markers when compared to normal control (N), chronic The results of cluster analysis were performed in the hepatitis C patient group (HCV) and the HBV group (HBV).
图 5显示正常对照组和 HBV组之间的 ROC曲线, 。  Figure 5 shows the ROC curve between the normal control group and the HBV group.
图 6显示正常对照组和 HCV组之间的 ROC曲线。  Figure 6 shows the ROC curve between the normal control group and the HCV group.
图 7显示以 has-miR-375、 has-miR-92a、 has-miR-10a、 has- miR-223、 has-miR-423-5 和 has-miR-99a 6个 microRNAs作为 markers时 对正常对照组 (N) 、 慢性丙肝病人组 (HCV) 和 HBV组 (HBV) 进行 聚类分析的结果。  Figure 7 shows the normal control in the case of has-miR-375, has-miR-92a, has-miR-10a, has-miR-223, has-miR-423-5 and has-miR-99a 6 microRNAs as markers Group (N), chronic hepatitis C (HCV) and HBV (HBV) cluster analysis results.
图 8显示正常对照组和 HBV-HCC组之间的 ROC曲线。  Figure 8 shows the ROC curve between the normal control group and the HBV-HCC group.
图 9显示 HBV组和 HBV-HCC组之间的 ROC曲线。  Figure 9 shows the ROC curve between the HBV group and the HBV-HCC group.
图 10显示以 has-miR-23b、 has-miR-423-5p、 has-miR-375, has- miR-23a、 has-miR-342-3p、 has-miR-10a、 has-miR-125b和 has-miR-92a 8 个 microRNAs作为 markers时对正常对照组( N )、肝癌病人组( HBV-HCC ) 和 HBV组 (HBV) 进行聚类分析的结果。 实施发明的最佳方式  Figure 10 shows that has-miR-23b, has-miR-423-5p, has-miR-375, has-miR-23a, has-miR-342-3p, has-miR-10a, has-miR-125b and The results of cluster analysis of the normal control (N), liver cancer patient group (HBV-HCC) and HBV group (HBV) were performed with 8 microRNAs of has-miR-92a as markers. The best way to implement the invention
实施例 1 样品的搜集和样品资料的整理  Example 1 Collection of samples and preparation of sample data
本发明人于 2007年 9月到 2008年 7月间从南京医科大学第一附属医 院和南京市传染病医院搜集了大量的血清样品, 通过对样品资料的整理, 本发明人从中选择了 80例健康对照者(平均年龄: 37.52± 12.09, 年龄跨 度: 20-75, 男性: 37, 女性: 43 ) 、 80 例病毒清除者 (平均年龄: 37.2 ±9.85, 年龄跨度: 25-52, 男性: 48, 女性: 32) 、 55例长期无症状 HBV 感染者 (平均年龄: 35.80 ± 11.40, 年龄跨度: 21-67, 男性: 33, 女性: 22) 、 80例慢性乙肝病人(平均年龄: 36.22± 12.18, 年龄跨度: 20-86, 男性: 55, 女性: 25) 、 65例 HBV相关的 HCC患者 (平均年龄: 53.43 ±9.10, 年龄跨度: 40-83, 男性: 59, 女性: 6 )和 48例慢性丙肝患者(平 均年龄: 35.96 ± 7.15 , 年龄跨度: 24-58, 男性: 39, 女性: 9 )作为 Solexa 测序和后续一系列 q-PCR验证的实验样品。 具体的样品归类标准如下: Group A: 健康对照组(n=80 ) The inventors collected a large number of serum samples from the First Affiliated Hospital of Nanjing Medical University and the Nanjing Infectious Disease Hospital from September 2007 to July 2008. The inventors selected 80 cases from the sample data. Healthy controls (mean age: 37.52 ± 12.09, age span: 20-75, male: 37, female: 43), 80 viral removers (mean age: 37.2 ± 9.85, age span: 25-52, male: 48 , Female: 32), 55 patients with long-term asymptomatic HBV infection (mean age: 35.80 ± 11.40, age span: 21-67, male: 33, female: 22), 80 patients with chronic hepatitis B (mean age: 36.22 ± 12.18 , Age span: 20-86, Male: 55, Female: 25), 65 patients with HBV-related HCC (mean age: 53.43 ± 9.10, age span: 40-83, male: 59, female: 6) and 48 patients Chronic hepatitis C patients (flat Mean age: 35.96 ± 7.15, age span: 24-58, male: 39, female: 9) Experimental samples for Solexa sequencing and subsequent series of q-PCR validations. The specific sample classification criteria are as follows: Group A: healthy control group (n=80)
1.乙肝表面抗体、 乙肝表面抗原和乙肝核心抗体阴性  1. Hepatitis B surface antibody, hepatitis B surface antigen and hepatitis B core antibody negative
2.丙肝抗体和 /或丙肝 RNA阴性  2. Hepatitis C antibody and / or hepatitis C RNA negative
3.ALT<40IU/L,AST<45IU/L  3. ALT <40IU/L, AST<45IU/L
4.没有其它系统性疾病  4. No other systemic diseases
5.年龄 > 20  5. Age > 20
Group B: 病毒清除者 (n=80 )  Group B: Virus Cleaner (n=80)
1.乙肝表面抗原阴性和 /或 HBV-DNA阴性, 乙肝表面抗体和乙肝核心抗体 阳性并且没有疫苗注射历史  1. Hepatitis B surface antigen negative and / or HBV-DNA negative, hepatitis B surface antibody and hepatitis B core antibody positive and no vaccine injection history
2.丙肝抗体和 /或丙肝 RNA阴性  2. Hepatitis C antibody and / or hepatitis C RNA negative
3.ALT<40IU/L,AST<45IU/L  3. ALT <40IU/L, AST<45IU/L
4.没有其它系统性疾病  4. No other systemic diseases
5.年龄 > 20  5. Age > 20
Group N: 对照组( n=60 ) Group A和 Group B的整合  Group N: Control group (n=60) Integration of Group A and Group B
Group C: 持续性无症状 HBV感染者 ( n=55 )  Group C: persistent asymptomatic HBV-infected (n=55)
1.乙肝表面抗原和核心抗体阳性  1. Hepatitis B surface antigen and core antibody positive
2.丙肝抗体和 /或丙肝 RNA阴性  2. Hepatitis C antibody and / or hepatitis C RNA negative
3. ALT<40IU/L,AST<45IU/L  3. ALT <40IU/L, AST<45IU/L
4.没有肝炎临床症状  4. No clinical symptoms of hepatitis
5.没有肝硬化临床迹象  5. No clinical signs of cirrhosis
6.没有其它系统性疾病  6. No other systemic diseases
7.年龄 > 20  7. Age > 20
Group D: 慢性乙肝患者 (n=80 )  Group D: Chronic hepatitis B patients (n=80)
1.乙肝表面抗原和乙肝核心抗体阳性至少 6个月  1. Hepatitis B surface antigen and hepatitis B core antibody are positive for at least 6 months
2.丙肝抗体和 /或丙肝 RNA阴性  2. Hepatitis C antibody and / or hepatitis C RNA negative
3. ALT和 /或 AST水平高于正常值的两倍  3. ALT and / or AST levels are more than twice the normal value
4.没有肝硬化临床迹象  4. No clinical signs of cirrhosis
5.没有其它系统性疾病  5. No other systemic diseases
6.年龄 > 20  6. Age > 20
Group HBV: HBV组 ( n=135 ) Group C和 Group D的整合  Group HBV: HBV Group (n=135) Integration of Group C and Group D
Group HBV-HCC: HBV相关的肝细胞癌 ( n=65 ) 1 ·乙肝表面抗原和乙肝核心抗体阳性 Group HBV-HCC: HBV-associated hepatocellular carcinoma (n=65) 1 · Hepatitis B surface antigen and hepatitis B core antibody positive
2.丙肝抗体和 /或丙肝 RNA阴性  2. Hepatitis C antibody and / or hepatitis C RNA negative
3.组织切片检查确诊为肝细胞癌  3. Tissue biopsy confirmed hepatocellular carcinoma
4.年龄 > 40  4. Age > 40
Group HCV: 慢性丙肝患者 ( n=48 )  Group HCV: Chronic hepatitis C patients (n=48)
1.丙肝抗体和 /或丙肝 RNA阳性  1. Hepatitis C antibody and / or hepatitis C RNA positive
2.乙肝表面抗原阴性  2. Hepatitis B surface antigen negative
3. ALT和 /或 AST水平高于正常值的两倍  3. ALT and / or AST levels are more than twice the normal value
4.没有肝硬化临床迹象  4. No clinical signs of cirrhosis
5.没有其它系统性疾病  5. No other systemic diseases
6.年龄 > 20 实施例 2 血清 /血浆中微小核糖核酸的 Solexa测序实验  6. Age > 20 Example 2 Solexa sequencing of serum/plasma microRNAs
使用 Solexa测序技术发现并证明 30个健康对照者和 30个慢性乙肝患 者血清 /血浆中稳定存在 88种差异表达的微小核糖核酸。 具体步骤为: ( 1 ) 收集健康对照者和慢性乙肝病人的血清 /血浆  Using Solexa sequencing technology, it was found and demonstrated that there were 88 differentially expressed microRNAs in serum/plasma of 30 healthy controls and 30 chronic hepatitis B patients. The specific steps are: (1) collecting serum/plasma from healthy controls and chronic hepatitis B patients
( 2 )分别取 80-100ml的血清, 加入等体积的 Trizol Reagent  (2) Take 80-100ml of serum separately and add an equal volume of Trizol Reagent
( 3 )相分离  (3) phase separation
室温放置 15min, 然后按 0.2ml了氯仿 mi Trizol Reagent的体积比加入 氯仿, 教育列震荡 15s, 室温 15min, 12,000g, 4°C ,离心 15min  Leave at room temperature for 15 min, then add 0.2 ml of chloroform mi Trizol Reagent to the volume ratio of chloroform. The education column is shaken for 15 s, room temperature for 15 min, 12,000 g, 4 ° C, centrifuge for 15 min.
( 4 )将水相转移到新的 50ml的离心管, 3步苯酚 /氯仿除去蛋白相  (4) Transfer the aqueous phase to a new 50 ml centrifuge tube and remove the protein phase with 3 steps of phenol/chloroform.
( 5 ) RNA沉淀  (5) RNA precipitation
将水相转移到新的离心管中 ,按 0.5ml异丙醇 /lml Trizol Reagent体积 加入异丙醇, -20 °C保存 60min, 12,000g, 4 °C ,离心 60min ( 6 )用 1 ml Trizol重悬沉淀, 将悬液转移到新的 1.5ml的离心管中  Transfer the aqueous phase to a new centrifuge tube, add isopropanol in a volume of 0.5 ml isopropanol / 1 ml Trizol Reagent, store at -20 °C for 60 min, 12,000 g, 4 °C, centrifuge for 60 min (6) with 1 ml Trizol Resuspend the pellet and transfer the suspension to a new 1.5 ml centrifuge tube
( 7 )重复 2, 4步(第四步离心改为 15min )  (7) Repeat steps 2 and 4 (the fourth step is changed to 15 minutes)
( 9 ) RNA洗涤  (9) RNA washing
去掉上清, 加入 75%乙醇, 12,000g, 4°C离心 5min  Remove the supernatant, add 75% ethanol, 12,000g, centrifuge at 5 ° C for 5min
( 10 ) 测量浓度  (10) Measuring concentration
通常能得到 5〜10 μg RNA/ 50-100 ml血清  Usually get 5~10 μg RNA/ 50-100 ml serum
( 11 ) 总 RNA进行 PAGE电泳回收 17-27nt RNA分子  ( 11 ) Total RNA was recovered by PAGE to recover 17-27nt RNA molecules
( 12 )将 adaptor prime酶联在小 RNA分子的 3'与 5'端  (12) Enzyme adaptor prime to the 3' and 5' ends of small RNA molecules
( 13 )进行 RT-PCR反应后并进行测序 ( 14 )数据分析与处理 (13) After RT-PCR reaction and sequencing (14) Data analysis and processing
具体实验结果见表 1。 根据表中的 Solexa结果, 我们选择在慢性乙肝 病人中的拷贝数是健康对照者中拷贝数的 20倍的 microRNAs作为本发明中 初步筛查的血清 markers,并且这些 microRNAs在慢性乙肝病人中的拷贝数 都大于 50拷贝, 由于技术操作问题, 我们舍弃了 miR-221 和 miR-629 (表 1中下划线标记) 。 通过筛选, 选择了 hsa-miR- 122a、 hsa-miR-423-5p、 hsa-miR-92a、 hsa-let-7c、 hsa-miR-23a、 hsa-miR-23b、 hsa-miR-223、 hsa-miR-342-3p、 hsa-miR-375、 hsa-miR-99a、 hsa-miR- 150, hsa-miR- 125b, hsa-miR- 10a 13个 microRNAs (表 1中斜体标记)作为初步筛查的 markers, 并设计逆转录和 q-PCR的引物 (见表 2 ) 。  The specific experimental results are shown in Table 1. Based on the Solexa results in the table, we selected microRNAs in chronic hepatitis B patients that were 20 times the copy number in healthy controls as serum markers for initial screening in the present invention, and copies of these microRNAs in chronic hepatitis B patients. The number is greater than 50 copies, due to technical operational problems, we have abandoned miR-221 and miR-629 (underlined in Table 1). By screening, hsa-miR-122a, hsa-miR-423-5p, hsa-miR-92a, hsa-let-7c, hsa-miR-23a, hsa-miR-23b, hsa-miR-223, hsa were selected. -miR-342-3p, hsa-miR-375, hsa-miR-99a, hsa-miR-150, hsa-miR-125b, hsa-miR- 10a 13 microRNAs (italicized in Table 1) for initial screening Markers, and designed reverse transcription and q-PCR primers (see Table 2).
表 1 健康对照者和慢性乙肝病人血清 Solexa测序结果  Table 1 Serum Solexa sequencing results of healthy controls and chronic hepatitis B patients
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hsa-mi -10a-F ACACTCCAGCTGGGTACCCTGTAGATCCGAA Hsa-mi -10a-F ACACTCCAGCTGGGTACCCTGTAGATCCGAA
hsa-mir-122a-F ACACTCCAGCTGGGTGGAGTGTGACAATGG hsa-mir-122a-F ACACTCCAGCTGGGTGGAGTGTGACAATGG
hsa-mi -125b-F ACACTCCAGCTGGGTCCCTGAGACCCTAAC Hsa-mi -125b-F ACACTCCAGCTGGGTCCCTGAGACCCTAAC
hsa-mir-150-F ACACTCCAGCTGGGTCTCCCAACCCTTGTA hsa-mir-150-F ACACTCCAGCTGGGTCTCCCAACCCTTGTA
hsa-mi -223-F ACACTCCAGCTGGGTGTCAGTTTGTCAAAT Hsa-mi -223-F ACACTCCAGCTGGGTGTCAGTTTGTCAAAT
hsa-mi -23a-F ACACTCCAGCTGGGATCACATTGCCAGGG Hsa-mi -23a-F ACACTCCAGCTGGGATCACATTGCCAGGG
hsa-mi -23b-F ACACTCCAGCTGGGATCACATTGCCAGGG Hsa-mi -23b-F ACACTCCAGCTGGGATCACATTGCCAGGG
hsa-mi -342-3p-F ACACTCCAGCTGGGTCTCACACAGAAATCGC Hsa-mi -342-3p-F ACACTCCAGCTGGGTCTCACACAGAAATCGC
hsa-mi -423-5p-F ACACTCCAGCTGGGTGAGGGGCAGAGAGCGA Hsa-mi -423-5p-F ACACTCCAGCTGGGTGAGGGGCAGAGAGCGA
hsa-mi -92a-F ACACTCCAGCTGGGTATTGCACTTGTCCCG Hsa-mi -92a-F ACACTCCAGCTGGGTATTGCACTTGTCCCG
hsa-mi -99a-F ACACTCCAGCTGGGAACCCGTAGATCCGAT Hsa-mi -99a-F ACACTCCAGCTGGGAACCCGTAGATCCGAT
hsa-mi -375-F ACACTCCAGCTGGGTTTGTTCGTTCGGCTC 实施例 3 包括 Solexa样品在内的血清中 小核糖核酸的 real-time PCR实验 Hsa-mi -375-F ACACTCCAGCTGGGTTTGTTCGTTCGGCTC Example 3 Real-time PCR of small RNA in serum including Solexa samples
用表 2的引物对 30例健康对照者(Solexa测序样品)、 30例病毒清 除者、 30例无症状 HBV感染者、 30例慢性乙肝患者 (Solexa测序样品) 和 30例慢性丙肝患者的血清进行微小核糖核酸的 qRT-PCR检验。  Using the primers of Table 2, sera from 30 healthy controls (Solexa sequencing samples), 30 viral scavengers, 30 asymptomatic HBV infected patients, 30 chronic hepatitis B patients (Solexa sequencing samples), and 30 chronic hepatitis C patients were performed. qRT-PCR assay of microRNAs.
( 1 )制备 cDNA样品: a )取 500ul血清; b )加等体积的水饱和酚, 振荡混匀, 4 °C , 13200rpm离心 3分钟,取上清; c )上清 + 1/2体积( 250ul ) 酚 + 1/2体积( 250ul )氯仿, 振荡混匀, 4 °C , 13200rpm离心 3分钟, 取 上清; d )加与上清等体积的氯仿震荡混勾, 4 °C , 13200rpm离心 3分钟, 取上清作为 RNA样品 ; e ) 然后通过 RNA逆转录反应得到 cDNA。 逆转 录的反应体系包括 4μ1 5 AMV buffer, 2μ1 lOmM each dNTP mixture ( Takara公司)、 0.5μ1 RNase Inhibitor ( Takara公司)、 2μ1 AMV ( Takara 公司) 以及 1.5μ1基因特异性反向引物混和物。 反应步骤为 16°C孵育 15 分钟, 42°C反应 1小时, 85°C孵育 5分钟;  (1) Prepare cDNA samples: a) Take 500 ul of serum; b) Add an equal volume of water-saturated phenol, mix by shaking, centrifuge at 3200 °C for 3 minutes at 3200 °C, and take supernatant; c) Supernatant + 1/2 volume ( 250ul) phenol + 1/2 volume (250ul) chloroform, vortex and mix, centrifuge at 3200C, 13200rpm for 3 minutes, take the supernatant; d) add the same volume of chloroform to the supernatant, shake at 4 °C, 13200rpm After 3 minutes, the supernatant was taken as an RNA sample; e) cDNA was then obtained by reverse transcription of RNA. The reverse reaction system included 4 μl 5 AMV buffer, 2 μl lOmM each dNTP mixture ( Takara), 0.5 μl RNase Inhibitor ( Takara), 2 μ1 AMV ( Takara), and a 1.5 μ1 gene-specific reverse primer mixture. The reaction step is 15 minutes incubation at 16 ° C, 1 hour reaction at 42 ° C, and 5 minutes incubation at 85 ° C;
( 2 ) q-PCR:将 cDNA按 1/5稀释,取 Ιμΐ稀译后的 cDNA,加入 0.3μ1 Taq酶( Takara公司), Ιμΐ 20xEVA GREEN, 0.2μ1 10μΜ正向引物, 0.2μ1 10μΜ 通用反向引物, 1.2 l 25mM MgCl2, 1.6μ1 2.5mM each dNTP mixture ( Takara公司) , 2μ1 lOxPCR buffer, 13.5μ1Η20, 20μ1体系进行 q-PCR。 仪器使用的是 ABI Prism 7300荧光定量 PCR仪, PCR的反应条件是: 95 °C、 5分钟进行 1个循环→ 95 °C、 15秒, 60°C、 1分钟进行 40个循环。 两组样品血清 microRNA的表达量比值可用方程 2—AG表示, 其中 AG=CT groupi -CT grouP2 o 对数据结果用 Cluster 3.0进行聚类分析, 从结果分析得出, 健康对照者和病毒清除者之间无明显区别, HBV携带者和慢性乙肝病人之 间也无明显区别。以 hsa-miR-122a、hsa-miR-423-5p、hsa-miR-92a、hsa-let-7c、 hsa-miR-23a、 hsa-miR-23b、 hsa-miR-223、 hsa-miR-342-3p、 hsa-miR-375、 hsa-miR-99a、 hsa-miR- 150、 hsa-miR- 125b、 hsa-miR- 10a 13个 microRNAs 作为 markers对数据结果用 Cluster 3.0进行聚类分析, 结果见图 1、 2、 3。 图 1是 30例健康对照者 (A ) 和 30例病毒清除者 (B ) 聚类分析的结果, 图 2是 30例无症状 HBV携带者者 ( C )和 30例慢性乙肝患者 ( D ) 聚类 分析的结果, 图 3是 30例健康对照者(A ) 、 30例病毒清除者(B ) 、 30 例慢性丙肝患者(HCV ) 、 30例无症状 HBV携带者者(C )和 30例慢性 乙肝患者 (D ) 的聚类分析的结果。 从图 1 可以看出健康对照者 (A ) 和 病毒清除者 (B ) 聚类分不开, 从图 2可以看出 HBV携带者 (C )和慢性 乙肝患者 (D ) 聚类也分不开, 从图 3 中可以看出健康对照者 (A ) 和病 毒清除者(B ) 、 HBV携带者(C )和慢性乙肝患者(D )都能和慢性丙肝 患者 (HCV ) 分开, 因此将健康对照者 (A ) 和病毒清除者 (B ) 整合为 对照组 (Group N ) , 将 HBV携带者 (C ) 和慢性乙肝患者 (D ) 整合为 HBV组 ( Group HBV ) 。 实施例 4 样品重新整合并扩大样品量后血清中微小核糖核酸的 real-time PCR实验 (2) q-PCR: dilute the cDNA in 1/5, extract the cDNA from the Ιμΐ, add 0.3μ1 Taq enzyme ( Takara), Ιμΐ 20xEVA GREEN, 0.2μ1 10μΜ forward primer, 0.2μ1 10μΜ universal reverse Primers, 1.2 l 25 mM MgCl 2 , 1.6 μl 2.5 mM each dNTP mixture ( Takara), 2 μl lOx PCR buffer, 13.5 μl Η 2 0, 20 μl system for q-PCR. The instrument was an ABI Prism 7300 real-time PCR instrument. The reaction conditions for the PCR were: 95 ° C, 5 minutes for 1 cycle → 95 ° C, 15 seconds, 60 ° C, 1 minute for 40 cycles. The ratio of the expression level of serum microRNA in the two groups can be expressed by Equation 2 - AG , where AG = C T groupi - C T g rou P 2 o The data results are clustered by Cluster 3.0, and the results are analyzed. There was no significant difference between healthy controls and virus removers, and there was no significant difference between HBV carriers and chronic hepatitis B patients. hsa-miR-122a, hsa-miR-423-5p, hsa-miR-92a, hsa-let-7c, hsa-miR-23a, hsa-miR-23b, hsa-miR-223, hsa-miR-342 -3p, hsa-miR-375, hsa-miR-99a, hsa-miR-150, hsa-miR-125b, hsa-miR- 10a 13 microRNAs were used as markers to cluster data analysis with Cluster 3.0. Figure 1, 2, 3. Figure 1 shows the results of cluster analysis of 30 healthy controls (A) and 30 viral scavengers (B). Figure 2 shows 30 patients with asymptomatic HBV carriers (C) and 30 patients with chronic hepatitis B (D). The results of the class analysis, Figure 3 are 30 healthy controls (A), 30 viral scavengers (B), 30 chronic hepatitis C patients (HCV), 30 asymptomatic HBV carriers (C), and 30 chronic Results of cluster analysis of hepatitis B patients (D). It can be seen from Figure 1 that the healthy control (A) and the virus remover (B) clusters are inseparable. It can be seen from Figure 2 that HBV carriers (C) and chronic hepatitis B patients (D) clusters are also inseparable. It can be seen from Figure 3 that healthy controls (A) and virus removers (B), HBV carriers (C), and chronic hepatitis B patients (D) can be separated from chronic hepatitis C patients (HCV), so healthy controls will be used. (A) and virus scavenger (B) were integrated into a control group (Group N), and HBV carriers (C) and chronic hepatitis B patients (D) were integrated into the HBV group (Group HBV). Example 4 Real-time PCR experiment of microRNA in serum after re-integration and expansion of sample volume
用表 2的引物对 100例对照组( 50例健康对照者和 50例病毒清除者)、 Using the primers of Table 2, 100 control groups (50 healthy controls and 50 viral scavengers),
75例 HBV组 ( 25例 HBV携带者和 50例慢性乙肝患者) 和 18例慢性丙 肝患者的血清进行微小核糖核酸的 qRT-PCR检验。 实验方法、 qRT-PCR 结果处理方法和聚类方法与实施例 3相同。 The sera of 75 HBV groups (25 HBV carriers and 50 chronic hepatitis B patients) and 18 chronic hepatitis C patients were subjected to qRT-PCR assay of microRNA. The experimental method, the qRT-PCR result processing method, and the clustering method were the same as in the third embodiment.
qRT-PCR结果进一步证明健康对照者和病毒清除者之间、 HBV携带 者和慢性乙肝病人之间确实无明显区别。以 hsa-miR- 122a、 hsa-miR-423 -5p、 hsa-miR-92a 、 hsa-let-7c 、 hsa-miR-23a 、 hsa-miR-23b 、 hsa-miR-223 、 hsa-miR-342-3p、 hsa-miR-375、 hsa-miR-99a、 hsa-miR- 150、 hsa-miR- 125b、 hsa-miR- 10a 13个 microRNAs作为 markers对数据结果用 Cluster 3.0进行聚 类分析, 聚类结果见图 4。 从图 4中可以看出, 实验所用的 193例血清样 品可以被明显地分为 3组: 对照组( N ) 、 曼性丙肝病人组( HCV )和 HBV 组 ( HBV ) 。  The qRT-PCR results further demonstrate that there is indeed no significant difference between healthy controls and virus removers, between HBV carriers and chronic hepatitis B patients. hsa-miR-122a, hsa-miR-423-5p, hsa-miR-92a, hsa-let-7c, hsa-miR-23a, hsa-miR-23b, hsa-miR-223, hsa-miR-342 -3p, hsa-miR-375, hsa-miR-99a, hsa-miR-150, hsa-miR-125b, hsa-miR- 10a 13 microRNAs as markers for clustering analysis of data results with Cluster 3.0, clustering The results are shown in Figure 4. As can be seen from Figure 4, the 193 serum samples used in the experiment can be clearly divided into three groups: control group (N), human hepatitis C patient group (HCV) and HBV group (HBV).
为了评估这 13个 microRNAs在 HBV疾病早期诊断中的诊断能力, 本 发明人又对对照组、 HBV组、 HCV组和 HBV-HCC组样品的 real-time PCR 结果进行风险评分,以每个 microRNA表达量的 5%或 95 %的参考区间为风 P佥值, 通过绘制 ROC 曲线来评估预测的灵敏性和特异性。 ROC分析结果 见表 3、 4、 5和图 5、 6。 In order to evaluate the diagnostic ability of these 13 microRNAs in the early diagnosis of HBV disease, the inventors also performed real-time PCR on samples of the control group, HBV group, HCV group and HBV-HCC group. Results Risk scores were taken, with a reference range of 5% or 95% of each microRNA expression being the wind P佥 value, and the ROC curve was plotted to assess the sensitivity and specificity of the prediction. The ROC analysis results are shown in Tables 3, 4, and 5 and Figures 5 and 6.
表 3显示, miR-375 , miR-10a、 miR-223 ( miR-122a或 miR-342-3p ) 、 miR-423以 100%的 AUC ( ROC曲线下面积 )将对照组和 HBV组分开, 表 4显示 miR-92a和 miR-423-5p以 99.6%的 AUC将对照组和 HCV组分开, 而表 5显示 miR-375和 miR-92a将 HBV组和 HCV组分开。 当用 miR-375、 miR-10a、 miR-223和 miR-423-5p 4个 markers来区分对照组和 HBV组时, AUC为 99.9 + 0.1%,灵敏度为 99.3%,特异性为 98.8%(图 5 )。当用 miR-92a、 miR-423 -5p 2个 markers来区分对照组和 HCV组时, AUC为 99.6士 0.4%, 灵敏度为 97.9%, 特异性为 99.4% (图 6 ) 。  Table 3 shows that miR-375, miR-10a, miR-223 (miR-122a or miR-342-3p) and miR-423 open the control and HBV components at 100% AUC (area under the ROC curve), 4 shows that miR-92a and miR-423-5p open the control and HCV components with 99.6% AUC, while Table 5 shows that miR-375 and miR-92a open the HBV and HCV components. When miR-375, miR-10a, miR-223 and miR-423-5p 4 markers were used to distinguish the control group from the HBV group, the AUC was 99.9 + 0.1%, the sensitivity was 99.3%, and the specificity was 98.8%. 5). When miR-92a, miR-423 -5p 2 markers were used to distinguish the control group from the HCV group, the AUC was 99.6 ± 0.4%, the sensitivity was 97.9%, and the specificity was 99.4% (Fig. 6).
表 3 区分对照组和 HBV组的单个或多个 microRNAs的 AUCs  Table 3 AUCs distinguishing single or multiple microRNAs from the control and HBV groups
Figure imgf000019_0001
表 4 区分对照组和 HCV组的单个或多个 microRNAs的 AUCs
Figure imgf000019_0001
Table 4 AUCs distinguishing single or multiple microRNAs from the control and HCV groups
Figure imgf000019_0002
表 5 区分 HBV和 HCV组的单个或多个 microRNAs的 AUCs
Figure imgf000019_0003
Figure imgf000020_0001
在上述结果的基础上对 miR-375、 miR-92a、 miR-10a、 miR-223、 miR-423-5 和 miR-99a 6个 markers进行聚类分析, 聚类分析结果见图 7。 图 7显示, 当用 miR-375、 miR-92a、 miR-10a、 miR-223、 miR-423-5 和 miR-99a 6个 markers时, 本发明人就能将对照组、 HBV组和 HCV组 3个 组区分开来, 160个对照组只有 2个、 135个 HBV组中只有 1个被错误的 归类, 而 HCV组中没有一个被错误归类 实施例 5 HBV 相关的肝癌病人血清中微小核糖核酸的 real-time PCR实
Figure imgf000019_0002
Table 5 AUCs distinguishing single or multiple microRNAs from the HBV and HCV groups
Figure imgf000019_0003
Figure imgf000020_0001
On the basis of the above results, clustering analysis was performed on 6 markers of miR-375, miR-92a, miR-10a, miR-223, miR-423-5 and miR-99a. The results of cluster analysis are shown in Fig. 7. Figure 7 shows that when using miR-375, miR-92a, miR-10a, miR-223, miR-423-5 and miR-99a 6 markers, the inventors were able to control, HBV and HCV groups. The three groups were divided, only two of the 160 control groups and only one of the 135 HBV groups were incorrectly classified, while none of the HCV groups were misclassified. Example 5 HBV-related liver cancer patients were slightly sera Real-time PCR of ribonucleic acid
用表 2的引物对 65例 HBV相关的肝癌病人的血清进行微小核糖核 酸的 qRT-PCR检验。 实验方法、 qRT-PCR结果处理方法和聚类方法与实 施例 3、 4相同。  The sera of 65 HBV-related liver cancer patients were subjected to qRT-PCR assay of microribonucleotide using the primers of Table 2. The experimental method, the qRT-PCR result processing method, and the clustering method were the same as those of Examples 3 and 4.
为了评估这 13个 microRNAs在肝癌早期诊断中的诊断能力, 本发明 人对对照组、 HBV组、 HCV组和 HBV-HCC组样品的 real-time PCR结果 也进行风险评分,以每个 microRNA表达量的 5%或 95 %的参考区间为风险 值, 通过绘制 ROC 曲线来评估预测的灵敏性和特异性。 ROC分析结果见 表 6、 7和图 8、 9。  In order to evaluate the diagnostic ability of these 13 microRNAs in the early diagnosis of liver cancer, the inventors also performed risk-scores on the real-time PCR results of the control, HBV, HCV, and HBV-HCC samples, with each microRNA expression. The 5% or 95% reference interval is the risk value, and the ROC curve is plotted to assess the sensitivity and specificity of the prediction. The ROC analysis results are shown in Tables 6, 7 and Figures 8, 9.
表 6显示, miR-23b、 miR-423-5p、 miR-375 , miR-23a和 miR-342-3p 以 99.9%的 AUC将对照组和 HCC组分开, 表 Ί显示 miR-10a和 miR-92a 将 HBV组和 HCC组分开。 当用 miR-23b、 miR-423-5p、 miR-375 , miR-23a 和 miR-342-3p 5个 markers来区分对照组和 HBV-HCC组时, AUC为 99.9% ± 0.1%, 灵敏度为 96.9%, 特异性为 99.4% (图 8 ) , 而当用 miR-10a和 miR-125b区分 HBV组和 HBV-HCC组时, AUC为 99.2%,灵敏度为 98.5%, 特异性为 98.5% (图 9 ) 。  Table 6 shows that miR-23b, miR-423-5p, miR-375, miR-23a and miR-342-3p open the control and HCC fractions with 99.9% AUC, showing miR-10a and miR-92a The HBV group and the HCC component were opened. When using miR-23b, miR-423-5p, miR-375, miR-23a and miR-342-3p 5 markers to distinguish between the control group and the HBV-HCC group, the AUC was 99.9% ± 0.1%, and the sensitivity was 96.9. %, the specificity was 99.4% (Fig. 8), and when the HBV group and the HBV-HCC group were distinguished by miR-10a and miR-125b, the AUC was 99.2%, the sensitivity was 98.5%, and the specificity was 98.5% (Fig. 9). ).
在上述结果的基础上对 miR-23b、 miR-423-5p、 miR-375 , miR-23a、 miR-342-3p、 miR-10a、 miR-125b和 miR-92a 8个 markers进行聚类分析, 聚类分析结果见图 10。 图 10显示, 当用 miR-23b、 miR-423-5p、 miR-375 , miR-23a、 miR-342-3p、 miR-10a、 miR-125b和 miR-92a 8个 markers时, 本 发明人就能将 HBV-HCC、 HBV和对照组 3个组分开, 160个对照组中只有 4个、 135个 HBV组中只有 2个被错误归类, 而 HBV-HCC组中没有一个 被错误归类。 Based on the above results, miR-23b, miR-423-5p, miR-375, miR-23a, Cluster analysis was performed on 8 markers of miR-342-3p, miR-10a, miR-125b and miR-92a. The results of cluster analysis are shown in Fig. 10. Figure 10 shows that when using miR-23b, miR-423-5p, miR-375, miR-23a, miR-342-3p, miR-10a, miR-125b and miR-92a 8 markers, the inventors The HBV-HCC, HBV and control groups were divided into three groups. Only 4 of the 160 control groups and only 2 of the 135 HBV groups were misclassified, and none of the HBV-HCC groups were misclassified.
表 6 区分对照组和 HBV肝癌组的单个或多个 microRNAs的 AUCs  Table 6 AUCs distinguishing single or multiple microRNAs from the control and HBV liver cancer groups
Figure imgf000021_0001
表 7 区分 HBV和 HBV肝癌组的单个或多个 microRNAs的 AUCs
Figure imgf000021_0001
Table 7 AUCs for distinguishing single or multiple microRNAs from HBV and HBV liver cancer groups
Figure imgf000021_0002
实施例 6 用于 HBV相关的肝癌和 HBV感染早期诊断的微小核糖 核酸试剂盒的制作
Figure imgf000021_0002
Example 6 Preparation of a microRNA kit for early diagnosis of HBV-associated liver cancer and HBV infection
微小核糖核酸试剂盒的制作工艺和操作流程是基于 solexa测序技术、 real-time PCR技术和生物芯片技术。  The manufacturing process and operating procedures of the microRNA kit are based on solexa sequencing technology, real-time PCR technology and biochip technology.
首先通过测序的方和 real-time PCR方法确定正常人和曼性乙肝病人 血清 /血浆中有一个以上拷贝的微小核糖核酸。 然后通过定量 PCR技术和 生物芯片技术筛选在 HBV相关的肝癌、 HBV感染相关其它疾病及正常生 理状态下表达量和差异程度大的一类血清 /血浆微小核糖核酸,作为预测是 否发生 HB V相关的肝癌和 HB V感染以及诊断病变程度的指标。最后筛选 出的对应 HBV相关的肝癌和 HBV感染的血清 /血浆微小核糖核酸的数量 控制在几条至十几条, 这是在芯片探针库的基础上做出的最优化的精简。 此试剂盒包括一批血清 /血浆微小核糖核酸引物, Taq酶、 dNTP等试剂, 其中微小核糖核酸的引物包括 has-miR-375、 has-miR-92a、 has-miR-10a、 has-miR-223、 has-miR-423-5p、 has-miR-23b、 has-miR-23a、 has-miR-342-3p、 has-miR-99a和 has-miR-125b的引物。 此试剂盒的价值在于只需要血清 /血 浆而不需要其它组织样品, 通过最精简的探针库检测微小核糖核酸的变化 趋势,再通过该变化趋势预测 HBV肝癌发生的可能性或诊断 HBV肝癌的 病理阶段。 因此将此试剂盒投入实践, 可以增加在早期发现 HBV肝癌和 HBV感染的可能, 帮助指导诊断和治疗。 First, more than one copy of the microRNA was determined in the serum/plasma of normal and human hepatitis B patients by sequencing and real-time PCR. Then, quantitative PCR and biochip technology were used to screen HBV-associated liver cancer, other diseases related to HBV infection, and a large amount of serum/plasma microRNAs under normal physiological conditions as a predictor of HBV-related. Liver cancer and HB V infection and indicators of the extent of disease diagnosis. The final screening of HBV-associated liver cancer and HBV-infected serum/plasma microRNAs is controlled in a few to a dozen, which is an optimized reduction based on the chip probe library. The kit includes a batch of serum/plasma microribonucleic acid primers, Taq enzymes, dNTPs and the like, wherein the primers of the microRNA include has-miR-375, has-miR-92a, has-miR-10a, has-miR- 223, has-miR-423-5p, has-miR-23b, has-miR-23a, has-miR-342-3p, Primers for has-miR-99a and has-miR-125b. The value of this kit is that only serum/plasma is needed without the need for other tissue samples, and the trend of microRNAs is detected by the most streamlined probe library, and the trend is used to predict the possibility of HBV liver cancer or to diagnose HBV liver cancer. Pathological stage. Therefore, putting this kit into practice can increase the possibility of early detection of HBV liver cancer and HBV infection, and help guide diagnosis and treatment.

Claims

权 利 要 求 Rights request
1. 一种和正常人相比、 慢性乙肝患者血清 /血浆中差异表达的微小核 糖核酸的组合, 具体包含 let-7c、 miR-l、 miR-10a、 miR-122、 miR-125b、 miR-128a、 miR-128b、 miR-150, miR-197、 miR-221 , miR-222, miR-223、 miR-23a、 miR-23b、 miR-27a、 miR-27b、 miR-30a、 miR-342-3p、 miR-361-5p、 miR-423-5p、 miR-532-5p、 miR-574-3p、 miR-629、 miR-92a、 miR-92b、 miR-99a、 miR-139-5p、 miR-193a-5p、 miR-193b、 miR-365、 miR-375、 miR-455-3p、 miR-483-3p、 miR-483-5p、 miR-486-3p、 miR-885-5p、 miR-99b、 let-7f、 let-7g、 let-7i、 miR-101、 miR-103、 miR-106a、 miR-106b、 miR-107, miR-126、 miR-130a、 miR-130b、 miR-142-3p、 miR-142-5p、 miR-144、 miR-146a、 miR-146b-5p、 miR-148b、 miR-151-5p、 miR-15a、 miR-16、 miR-17、 miR-182、 miR-183、 miR-185、 miR-186、 miR-18a、 miR-191、 miR-19b、 miR-20a、 miR-20b、 miR-21、 miR-210 , miR-26a、 miR-26b、 miR-29c、 miR-30e、 miR-340, miR-362-5p、 miR-363 , miR-374a、 miR-378, miR-424、 miR-451、 miR-454、 miR-532-5p、 miR-652, miR-660、 miR-7、 miR-923、 miR-93、 miR-96和 miR-98。 1. A combination of microRNAs differentially expressed in serum/plasma of chronic hepatitis B patients compared to normal humans, specifically including let-7c, miR-1, miR-10a, miR-122, miR-125b, miR- 128a, miR-128b, miR-150, miR-197, miR-221, miR-222, miR-223, miR-23a, miR-23b, miR-27a, miR-27b, miR-30a, miR-342- 3p, miR-361-5p, miR-423-5p, miR-532-5p, miR-574-3p, miR-629, miR-92a, miR-92b, miR-99a, miR-139-5p, miR- 193a-5p, miR-193b, miR-365, miR-375, miR-455-3p, miR-483-3p, miR-483-5p, miR-486-3p, miR-885-5p, miR-99b, Let-7f, let-7g, let-7i, miR-101, miR-103, miR-106a, miR-106b, miR-107, miR-126, miR-130a, miR-130b, miR-142-3p, miR-142-5p, miR-144, miR-146a, miR-146b-5p, miR-148b, miR-151-5p, miR-15a, miR-16, miR-17, miR-182, miR-183, miR-185, miR-186, miR-18a, miR-191, miR-19b, miR-20a, miR-20b, miR-21, miR-210, miR-26a, miR-26b, miR-29c, miR- 30e, miR-340, miR-362-5p, miR-3 63 , miR-374a, miR-378, miR-424, miR-451, miR-454, miR-532-5p, miR-652, miR-660, miR-7, miR-923, miR-93, miR- 96 and miR-98.
2. 根据权利要求 1所述的正常人, 其特征在于, 2. The normal person according to claim 1, wherein
( 1 ) 乙肝表面抗体、 乙肝表面抗原和乙肝核心抗体阴性  (1) Hepatitis B surface antibody, hepatitis B surface antigen and hepatitis B core antibody negative
( 2 ) 丙肝抗体和 /或丙肝 RNA阴性  (2) Hepatitis C antibody and / or hepatitis C RNA negative
( 3 ) ALT<40IU/L,AST<45IU/L  (3) ALT<40IU/L, AST<45IU/L
( 4 ) 没有其它系统性疾病  (4) No other systemic diseases
( 5 )年龄≥20。  (5) Age ≥ 20.
3. 根据权利要求 1所述的慢性乙肝患者, 其特征在于, 3. The chronic hepatitis B patient according to claim 1, wherein
( 1 ) 乙肝表面抗原和乙肝核心抗体阳性至少 6个月  (1) Hepatitis B surface antigen and hepatitis B core antibody are positive for at least 6 months
( 2 ) 丙肝抗体和 /或丙肝 RNA阴性  (2) Hepatitis C antibody and / or hepatitis C RNA negative
( 3 ) ALT和 /或 AST水平高于正常值的两倍  (3) ALT and / or AST levels are more than twice the normal value
( 4 ) 没有肝硬化临床迹象  (4) No clinical signs of cirrhosis
( 5 ) 没有其它系统性疾病  (5) No other systemic diseases
( 6 )年龄≥20。  (6) Age ≥ 20.
4. 根据权利要求 1所述的微小核糖核酸的组合, 其特征在于, 慢性乙 肝患者血清 /血浆中存在高于正常人 20 倍差异表达的微小核糖核酸的组 合合,, 具具体体包包含含 mmiiRR--112222aa、、 mmiiRR--442233、、 mmiiRR--9922aa、、 lleett--77cc、、 mmiiRR--2233aa、、 mmiiRR--2233bb、、 mmiiRR--222233、、 mmiiRR--334422--33pp、、 mmiiRR--337755,, mmiiRR--9999aa、、 mmiiRR--115500,, mmiiRR--112255bb、、 mmiiRR--1100aa。。 The combination of tiny ribonucleic acids according to claim 1, wherein a group of microRNAs which are differentially expressed 20 times higher than normal humans in serum/plasma of chronic hepatitis B patients are present. Conjugation, with specific body package containing mmiiRR--112222aa, mmiiRR--442233, mmiiRR--9922aa, lleett--77cc, mmiiRR--2233aa, mmiiRR--2233bb, mmiiRR--222233 , mmiiRR--334422--33pp, mmiiRR--337755,, mmiiRR--9999aa, mmiiRR--115500, mmiiRR--112255bb, mmiiRR--1100aa. .
55.. 根根据据权权利利要要求求 44所所述述的的微微小小核核糖糖核核酸酸的的组组合合,, 其其特特征征在在于于,, 所所述述的的 微微小小核核糖糖核核酸酸组组合合不不能能区区分分正正常常人人和和病病毒毒清清除除者者。。 55. The root combination according to the rights and interests of the micro-small ribonucleotide nucleic acid described in 44, the special feature of which is characterized in that The combination of the pico-nuclear ribonucleotide nucleic acid group can not distinguish between normal humans and viral virus clearing removers. .
55 66.. 根根据据权权利利要要求求 55所所述述的的病病毒毒清清除除者者,, 其其特特征征在在于于,, 55 66.. According to the rights and interests of the right to request the virus virus to clear the detoxification described in 55, its special characteristics are in,
(( 11 )) 乙乙肝肝表表面面抗抗原原阴阴性性和和 //或或 HHBBVV--DDNNAA阴阴性性,, 乙乙肝肝表表面面抗抗体体和和乙乙肝肝 核核心心抗抗体体阳阳性性并并且且没没有有疫疫苗苗注注射射历历史史  (( 11 )) Hepatitis B liver surface surface anti-antigen negative negative and / or HHBBVV--DDNNAA negative-negative, hepatitis B hepatitis liver surface anti-antibody and hepatitis B liver nuclear core anti-antibody The antibody is positive for positivity and there is no history of vaccination vaccine injection
(( 22 )) 丙丙肝肝抗抗体体和和 //或或丙丙肝肝 RRNNAA阴阴性性  (( 22 )) Hepatitis C anti-antibody and/or hepatitis C virus RRNNAA negative
(( 33 )) AALLTT<<4400IIUU//LL,,AASSTT<<4455IIUU//LL  (( 33 )) AALLTT<<4400IIUU//LL,,AASSTT<<4455IIUU//LL
1100 (( 44 )) 没没有有其其它它系系统统性性疾疾病病 1100 (( 44 )) There is no other systemic systemic disease
(( 55 ))年年龄龄≥≥2200。。  (( 55 )) Age of age ≥ ≥ 2200. .
77.. 根根据据权权利利要要求求 44所所述述的的微微小小核核糖糖核核酸酸的的组组合合,, 其其特特征征在在于于,, 所所述述的的 微微小小核核糖糖核核酸酸组组合合不不能能区区分分慢慢性性乙乙肝肝患患者者和和 HHBBVV携携带带者者。。 77. The root combination according to the rights and interests of the micro-small ribonucleotide nucleic acid described in 44, the special feature of which is characterized in that The combination of the micro-nuclear ribonucleotide nucleic acid group can not distinguish between patients with chronic hepatitis B liver disease and those with HHBBVV carrying. .
88.. 根根据据权权利利要要求求 77所所述述的的 HHBBVV携携带带者者,, 其其特特征征在在于于,, 88.. According to the rights and interests of the requirements of the HHBBVV carrying the carrier as described in 77, its special characteristics are in,
1155 (( 11 )) 乙乙肝肝表表面面抗抗原原和和核核心心抗抗体体阳阳性性 1155 (( 11 )) Hepatitis B liver surface anti-antigen and nuclear core anti-antibody positive
(( 22 )) 丙丙肝肝抗抗体体和和 //或或丙丙肝肝 RRNNAA阴阴性性  (( 22 )) Hepatitis C anti-antibody and/or hepatitis C virus RRNNAA negative
(( 33 )) AALLTT<<4400IIUU//LL,,AASSTT<<4455IIUU//LL  (( 33 )) AALLTT<<4400IIUU//LL,,AASSTT<<4455IIUU//LL
(( 44 )) 没没有有肝肝炎炎临临床床症症状状  (( 44 )) There is no hepatitis hepatitis inflammation clinical symptoms symptoms
(( 55 )) 没没有有肝肝硬硬化化临临床床迹迹象象  (( 55 )) There is no sign of liver and liver hard sclerotherapy clinical bed marks
2200 (( 66 )) 没没有有其其它它系系统统性性疾疾病病 2200 (( 66 )) There is no other systemic disease
(( 77 ))年年龄龄≥≥2200。。  (( 77 )) Age of age ≥ ≥ 2200. .
99.. 根根据据权权利利要要求求 44所所述述的的微微小小核核糖糖核核酸酸的的组组合合,, 其其特特征征在在于于,, 所所述述的的 微微小小核核糖糖核核酸酸组组合合可可以以将将对对照照组组、、 慢慢性性丙丙肝肝患患者者和和 HHBBVV组组分分开开。。 99. The root combination according to the rights and interests of the micro-small ribonucleotide nucleic acid described in 44, the special feature of which is characterized in that The combination of the piconucleotide ribonucleic acid group may be separate from the control group, the patient with chronic hepatitis C and the HHBBVV group. .
1100.. 根根据据权权利利要要求求 99所所述述的的对对照照组组,, 其其特特征征在在于于,, 由由权权利利要要求求 22所所述述 2255 的的正正常常人人和和权权利利要要求求 66所所述述的的病病毒毒清清除除者者构构成成。。 1100.. According to the rights and interests of the claim, the reference group of the reference group described in 99 is characterized in that it is 2255 as described in the right claim. The normal normal person and the rights of the rights are required to be composed of the virus virus clearing and removing agent described in 66. .
1111.. 根根据据权权利利要要求求 99所所述述的的慢慢性性丙丙肝肝患患者者,, 其其特特征征在在于于,, 1111.. According to the rights and interests of the authors, the patients with chronic hepatitis C virus liver disease described in 99, the special characteristics are in,
(( 11 )) 丙丙肝肝抗抗体体和和 //或或丙丙肝肝 RRNNAA阳阳性性  (( 11 )) Hepatitis C anti-antibody and/or or hepatitis C virus RRNNAA positive
(( 22 )) 乙乙肝肝表表面面抗抗原原阴阴性性  (( 22 )) Hepatitis B liver surface surface anti-antigen negative negative
(( 33 )) AALLTT和和 //或或 AASSTT水水平平高高于于正正常常值值的的两两倍倍  (( 33 )) AALLTT and / or or AASSTT water level is twice as high as twice the normal normal value
3300 * ( 5 ) 没有其它系统性疾病 3300 * (5) No other systemic diseases
( 6 )年龄≥20。  (6) Age ≥ 20.
12. 根据权利要求 9所述的 HBV组,其特征在于, 由权利要求 3所述 的慢性乙肝患者和权利要求 8所述的 HBV携带者构成。 13. 根据权利要求 4所述的微小核糖核酸的组合, 其特征在于, 所述 的 小核糖核酸组合中存在将对照组和 HBV组区分开的 小核糖核酸,具 体包含 miR-375、 miR-10a、 miR-223和 miR-423-5p。 The HBV group according to claim 9, comprising the chronic hepatitis B patient according to claim 3 and the HBV carrier according to claim 8. The combination of small ribonucleic acids according to claim 4, wherein the small ribonucleic acid combination has a small ribonucleic acid which separates the control group from the HBV group, specifically comprising miR-375, miR-10a. , miR-223 and miR-423-5p.
14. 根据权利要求 4所述的微小核糖核酸的组合, 其特征在于, 所述 的 小核糖核酸组合中存在将对照组和 HCV组区分开的 小核糖核酸,具 体包含 miR-92a和 miR-423-5p。 The combination of small ribonucleic acids according to claim 4, wherein the small ribonucleic acid combination has a small ribonucleic acid which separates the control group from the HCV group, specifically comprising miR-92a and miR-423. -5p.
15. 根据权利要求 4所述的微小核糖核酸的组合, 其特征在于, 所述 的微小核糖核酸组合中存在将对照组和 HBV-HCC组区分开的微小核糖核 酸, 具体包含 miR-23b、 miR-423-5p、 miR-375 , miR-23a和 miR-342-3p。 The combination of small ribonucleic acids according to claim 4, wherein the microribonucleic acid combination has a small ribonucleic acid which separates the control group from the HBV-HCC group, specifically comprising miR-23b, miR. -423-5p, miR-375, miR-23a and miR-342-3p.
16. 根据权利要求 2所述的微小核糖核酸的组合, 其特征在于, 所述 的微 d、核糖核酸组合中存在将 HBV组和 HBV-HCC组区分开的微 d、核糖核 酸, 具体包含 miR- 10a和 miR- 125b。 The combination of microRNAs according to claim 2, wherein the micro d and the ribonucleic acid combination have micro d and ribonucleic acid which distinguish the HBV group from the HBV-HCC group, and specifically include miR. - 10a and miR-125b.
17. 根据权利要求 4、 9、 13、 14所述的微小核糖核酸的组合, 其特征 在于, 所述的微小核糖核酸组合中存在将对照组、 HBV组和 HCV组区分 开的微小核糖核酸, 具体包含 miR-375、 miR-92a、 miR- 10a, miR-223、 miR-423-5 和 miR-99a。 17. The combination of tiny ribonucleic acids according to claims 4, 9, 13, and 14, wherein the microribonucleic acid combination has microRNAs that distinguish the control group, the HBV group, and the HCV group. Specifically, it includes miR-375, miR-92a, miR-10a, miR-223, miR-423-5 and miR-99a.
18. 根据权利要求 4、 9、 13、 15、 16所述的微小核糖核酸的组合, 其 特征在于,所述的微小核糖核酸组合中存在将对照组、 HBV组和 HBV-HCC 组区分开的微小核糖核酸, 具体包含 miR-23b、 miR-423-5p、 miR-375 , miR-23a、 miR-342-3p、 miR- 10a, miR- 125b、 miR-92a„ 19. 根据权利要求 4至 18所述的微小核糖核酸, 其特征在于, 所述的 小核糖核酸包含各 小核糖核酸所在的 小核糖核酸家族, 具体包含 miR- 122a , miR-423、 miR-92a、 let-7c、 miR-23a、 miR-23b、 miR-223、 miR-342-3p、 miR-375, miR-99a、 miR- 150, miR- 125b, miR-lOa的家族。 18. The combination of tiny ribonucleic acids according to claims 4, 9, 13, 15, and 16, wherein the microribonucleotide combination is distinguished from the control group, the HBV group, and the HBV-HCC group. A small ribonucleic acid, specifically comprising miR-23b, miR-423-5p, miR-375, miR-23a, miR-342-3p, miR-10a, miR-125b, miR-92a „ 19. according to claims 4 to 18 The microribonucleic acid, characterized in that the small ribonucleic acid comprises a small ribonucleic acid family in which each small ribonucleic acid is located, specifically comprising miR-122a, miR-423, miR-92a, let-7c, miR-23a , miR-23b, miR-223, miR-342-3p, miR-375, miR-99a, miR-150, miR-125b, a family of miR-lOa.
20. 根据权利要求 4至 19所述的微小核糖核酸组合制备的诊断试剂 盒, 其特征在于, 所述的试剂盒包含 has-miR-375、 has-miR-92a、 has-miR-10a、 has-miR-223、 has-miR-423-5p、 has-miR-23b、 has-miR-23a、 has-miR-342-3p, has-miR-99a和 has-miR-I b的引物以及 Taq酶、 dNTP 等试剂。 21. 根据权利要求 20所述的微小核糖核酸试剂盒的制备方法,其特征 是由以下几个步骤构成: 20. Diagnostic reagent prepared by microribonucleic acid combination according to claims 4 to 19. a cassette, characterized in that the kit comprises has-miR-375, has-miR-92a, has-miR-10a, has-miR-223, has-miR-423-5p, has-miR-23b, Primers of has-miR-23a, has-miR-342-3p, has-miR-99a and has-miR-I b, and reagents such as Taq enzyme and dNTP. The method for preparing a microribonucleic acid kit according to claim 20, which is characterized by the following steps:
( 1 )通过 Solexa测序法初步确定正常人和慢性乙肝患者血清 /血浆中 存在差异表达的微小核糖核酸  (1) Predetermination of differentially expressed microRNAs in serum/plasma of normal and chronic hepatitis B patients by Solexa sequencing
( 2 )根据测序的结果再进行实时定量 PCR方法进一步确定正常人、 HBV感染者和 HBV肝癌病人血清 /血浆中存在差异表达的微小 核糖核酸  (2) According to the results of sequencing, real-time quantitative PCR is further used to further determine the differential expression of microRNA in serum/plasma of normal, HBV and HBV patients.
( 3 )根据 PCR结果, 最终确定可以作为区别正常人、 HBV感染者和 HBV肝癌病人的标志 microRNA  (3) According to the PCR results, it can be finally identified as a marker for distinguishing normal people, HBV infected patients and HBV liver cancer patients.
( 4 )设计试剂盒, 试剂盒由标志 microRNA 的引物、 实时定量 PCR 试剂构成。  (4) Design kit, which consists of primers for microRNAs and real-time quantitative PCR reagents.
22. 根据权利要求 20和 21所述的试剂盒, 其特征在于, 所述试剂盒 可用于 HBV相关的肝癌和 HBV感染的早期诊断和动态监测,为临床医生快 速准确掌握患者的疾病状态和病情严重程度、及时釆取更具个性化的防治方 案提供支持, 从而最大限度地长期抑制或消除 HBV, 减轻肝细胞炎症坏死 及肝纤维化, 延緩和阻止疾病进展, 减少和防止肝脏失代偿、 肝硬化、 原发 性肝细胞癌及其并发症的发生, 从而改善生活质量和延长存活时间。 The kit according to claims 20 and 21, wherein the kit can be used for early diagnosis and dynamic monitoring of HBV-related liver cancer and HBV infection, for the clinician to quickly and accurately grasp the disease state and condition of the patient. Severity and timely access to more personalized prevention and treatment programs to support, to maximize the long-term inhibition or elimination of HBV, reduce hepatocyte inflammation and necrosis and liver fibrosis, delay and prevent disease progression, reduce and prevent liver decompensation, Liver cirrhosis, primary hepatocellular carcinoma and its complications occur to improve quality of life and prolong survival.
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