WO2008141448A1 - Mutant reoviruses and methods of making and using - Google Patents

Mutant reoviruses and methods of making and using Download PDF

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Publication number
WO2008141448A1
WO2008141448A1 PCT/CA2008/000964 CA2008000964W WO2008141448A1 WO 2008141448 A1 WO2008141448 A1 WO 2008141448A1 CA 2008000964 W CA2008000964 W CA 2008000964W WO 2008141448 A1 WO2008141448 A1 WO 2008141448A1
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Prior art keywords
reovirus
polypeptide
mutation
expression
mutant
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English (en)
French (fr)
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Matthew C. Coffey
Bradley G. Thompson
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Oncolytics Biotech Inc
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Oncolytics Biotech Inc
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Priority to HK10101956.8A priority Critical patent/HK1136006B/en
Priority to AU2008253505A priority patent/AU2008253505B2/en
Priority to JP2010508676A priority patent/JP2010527593A/ja
Priority to EP08748334.3A priority patent/EP2150613B1/en
Priority to CN200880016669A priority patent/CN101679953A/zh
Priority to DK08748334.3T priority patent/DK2150613T3/en
Priority to ES08748334.3T priority patent/ES2611455T3/es
Priority to CA2680661A priority patent/CA2680661C/en
Application filed by Oncolytics Biotech Inc filed Critical Oncolytics Biotech Inc
Priority to MX2009012420A priority patent/MX2009012420A/es
Publication of WO2008141448A1 publication Critical patent/WO2008141448A1/en
Priority to IL200690A priority patent/IL200690A/en
Priority to ZA2009/07017A priority patent/ZA200907017B/en
Anticipated expiration legal-status Critical
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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N7/00Viruses; Bacteriophages; Compositions thereof; Preparation or purification thereof
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P35/00Antineoplastic agents
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P35/00Antineoplastic agents
    • A61P35/02Antineoplastic agents specific for leukemia
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P43/00Drugs for specific purposes, not provided for in groups A61P1/00-A61P41/00
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/005Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from viruses
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K35/00Medicinal preparations containing materials or reaction products thereof with undetermined constitution
    • A61K2035/11Medicinal preparations comprising living procariotic cells
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K35/00Medicinal preparations containing materials or reaction products thereof with undetermined constitution
    • A61K35/12Materials from mammals; Compositions comprising non-specified tissues or cells; Compositions comprising non-embryonic stem cells; Genetically modified cells
    • A61K35/13Tumour cells, irrespective of tissue of origin
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2720/00MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA dsRNA viruses
    • C12N2720/00011Details
    • C12N2720/12011Reoviridae
    • C12N2720/12021Viruses as such, e.g. new isolates, mutants or their genomic sequences
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2720/00MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA dsRNA viruses
    • C12N2720/00011Details
    • C12N2720/12011Reoviridae
    • C12N2720/12022New viral proteins or individual genes, new structural or functional aspects of known viral proteins or genes

Definitions

  • ISVP intermediate subvirion particle
  • Partial proteolysis of an intact reo virus virion to generate an ISVP also can be performed in vitro using a protease such as chymotrypsin or trypsin. See, for example, Golden et al. (2002, J. Virol, 76:7430-43) and Chandran & Nibert (1998, J. Virol, 72:467-75).
  • mutant reo viruses that lack or exhibit reduced expression of the sigma3 polypeptide or that lack a functional sigma3 polypeptide.
  • the mutant reoviruses described herein can be used to generate and stably propagate ISVPs.
  • a mutant reovirus comprises a first mutation that reduces expression of a sigma3 polypeptide, essentially eliminates expression of a sigma3 polypeptide, or results in an absence of a functional sigma3 polypeptide.
  • the first mutation can be in a nucleic acid encoding the sigma3 polypeptide or in a nucleic acid that regulates expression of the sigma3 polypeptide.
  • the nucleic acid is the S4 gene.
  • Representative mutations include a genetically- engineered substitution and a genetically-engineered insertion or deletion of one or more nucleotides.
  • the first mutation reduces expression of the sigma3 polypeptide by at least 30%.
  • a mutant reovirus as described herein can include one or more further mutations.
  • the further mutation or mutations can be a mutation that reduces expression of a mul polypeptide, essentially eliminates expression of a mul polypeptide, or results in an absence of a functional mul polypeptide; a mutation that reduces expression of a Iambda2 polypeptide, essentially eliminates expression of a Iambda2 polypeptide, or results in an absence of a functional Iambda2 polypeptide; and/or a mutation that reduces expression of a sigmal polypeptide, essentially eliminates expression of a sigmal polypeptide, or results in an absence of a functional sigmal polypeptide.
  • a genetically-engineered reovirus infectious subviral particle also is provided.
  • Such a reovirus ISVP can be genetically-engineered to exhibit reduced expression of a sigma3 polypeptide, to lack expression of a sigma3 polypeptide, or to express a non- functional sigma3 polypeptide.
  • a reovirus ISVP as described herein can be genetically-engineered to include a first mutation.
  • the first mutation can be in a nucleic acid encoding the sigma3 polypeptide or in a nucleic acid that regulates expression of the sigma3 polypeptide.
  • the nucleic acid is the S4 gene.
  • Representative mutations include a substitution and an insertion or deletion of one or more nucleotides.
  • the first mutation reduces expression of the sigma3 polypeptide by at least 30%.
  • a mutant reovirus as described herein can include one or more further mutations.
  • the further mutation or mutations can be a mutation that reduces expression of a mul polypeptide, essentially eliminates expression of a mul polypeptide, or results in an absence of a functional mul polypeptide; a mutation that reduces expression of a Iambda2 polypeptide, essentially eliminates expression of a Iambda2 polypeptide, or results in an absence of a functional Iambda2 polypeptide; and/or a mutation that reduces expression of a sigmal polypeptide, essentially eliminates expression of a sigmal polypeptide, or results in an absence of a functional sigmal polypeptide.
  • a method of making a reovirus having increased infectivity is provided.
  • Such a reovirus can be made by mutating a first reovirus to generate a mutant reovirus, wherein the mutant reovirus exhibits reduced expression of a sigma3 polypeptide, lacks expression of a sigma3 polypeptide, or expresses a non- functional sigma3 polypeptide and isolating the mutant reovirus, wherein the mutant reovirus has increased infectivity compared to the first reovirus.
  • Increased infectivity can be evidenced by an increase in the range of neoplastic cells that can be infected by the mutant reovirus compared to the first reovirus or by an increase in the number of cells infected by the mutant reovirus compared to the first reovirus.
  • a method of obtaining a genetically-engineered reovirus infectious subviral particle also is provided.
  • Such a method includes genetically-engineering a first reovirus to exhibit reduced expression of a sigma3 polypeptide, to lack expression of a sigma3 polypeptide, or to express a non-functional sigma3 polypeptide; culturing the genetically-engineered reovirus, and isolating ISVPs to thereby obtain a genetically-engineered reovirus ISVP.
  • a method of treating a proliferative disorder in a subject includes administering, to the subject, the mutant reovirus disclosed herein or the genetically-engineered reovirus ISVP disclosed herein. Such methods also can include at least one procedures chosen from surgery, chemotherapy, radiation therapy, and immunosuppressive therapy.
  • a pharmaceutical composition is provided that includes the mutant reovirus described herein or the genetically-engineered reovirus ISVP described herein. Such a pharmaceutical composition further can include one or more chemotherapeutic agents and/or one or more immunosuppressive agents.
  • a sigma3 polypeptide that includes a mutation that results in a sigmaS polypeptide that is not incorporated into a viral capsid or that is incorporated at reduced levels into the capsid.
  • Figure l is a schematic showing the structural elements of a reovirus virion and a reovirus ISVP.
  • mutant reoviruses that lack or exhibit reduced expression of the sigma3 polypeptide or that lack a functional sigma3 polypeptide are described herein.
  • the mutant reoviruses described herein also can contain a further mutation in one or more of the other outer capsid proteins.
  • the mutant reoviruses provided herein can be used to generate intermediate subvirion particles (ISVPs) that can be stably propagated as ISVPs for multiple passages.
  • ISVPs intermediate subvirion particles
  • ISVPs typically exhibit increased infectivity and/or decreased immunogenicity compared to reovirus itself, but ISVPs typically lack the ability to propagate in a stable fashion.
  • the ISVPs formed by the mutant reovirus in contrast, demonstrate stable propagation for multiple replications, unlike ISVPs created by enzymatic treatment or the like.
  • Mutant reoviruses as described herein can contain a first mutation that reduces or essentially eliminates expression of a sigma3 polypeptide or that results in the absence of a functional sigma3 polypeptide.
  • a mutation that eliminates expression of a sigma3 polypeptide or that results in the absence of a functional sigma3 polypeptide can be in the nucleic acid encoding the sigma3 polypeptide (i.e., the S4 gene) or in a nucleic acid that encodes a polypeptide that regulates the expression or function of the sigma3 polypeptide.
  • the sigma3 polypeptide is 365 amino acids in length and has a molecular weight of 41 kDa.
  • An intact virion contains 600 copies of the sigma3 polypeptide.
  • the sigma3 polypeptide likely interacts with other outer capsid proteins including, for example, mul, Iambda2, and sigmal, and also may play a role in RNA selection or RNA packaging. Images of reo virus virions demonstrate that the sigma3 polypeptide projects like fingers on the surface of the virion and contributes significantly to the density of the virion. See Figure 1.
  • a mutation that reduces the expression of a sigma3 polypeptide refers to a mutation that results in a decrease in the amount of sigma3 polypeptides, compared to a reovirus expressing wild type levels of sigma3 polypeptide, of at least 30% (e.g., at least 40%, 50%, 60%, 70%, 80%, 90%, or 95%).
  • a mutation that essentially eliminates expression of a sigma3 polypeptide refers to a mutation that results in a decrease in the amount of sigma3 polypeptides, relative to the amount of sigma3 polypeptides produced by a wild type reovirus, of at least 95% (e.g., 96%, 97%, 98%, 99%, or 100%).
  • a mutation that results in a decrease in or absence of a functional sigma3 polypeptide refers to a mutation that allows expression of the sigma3 polypeptide but that results in a sigma3 polypeptide that is not able to assemble or incorporate into the viral capsid. It would be understood that it may be desirable or necessary for sigma3 polypeptides to retain other functionalities (e.g., the ability to bind RNA) in order that the mutant reovirus retain the ability to propagate.
  • a mutation in a sigma3 polypeptide as described herein can result in a sigma3 polypeptide that is incorporated into the capsid at levels that are reduced relative to a sigma3 polypeptide that does not contain the mutation (e.g., a wild type sigma3 polypeptide).
  • a mutation in a sigma3 polypeptide as described herein also can result in a sigma3 polypeptide that cannot be incorporated into a viral capsid.
  • a sigma3 polypeptide may have reduced function or lack function due, for example, to an inability of the sigma3 polypeptide and the mul polypeptide to bind appropriately, or to a conformational change that reduces or prohibits incorporation of the sigma3 polypeptide into the capsid.
  • a mutant reovirus according to this disclosure can be a type 3 mammalian orthoreovirus.
  • Type 3 mammalian orthoreoviruses include, without limitation, Dearing and Abney strains (T3D or T3A, respectively). See, for example, ATCC Accession Nos. VR-232 and VR-824.
  • a mutant reovirus as described herein can contain a spontaneously-generated mutation or a genetically- engineered mutation.
  • naturally-occurring reo viruses e.g., isolated from a source in nature such as from a patient
  • reoviruses see, e.g., U.S. Patent No. 7,163,678
  • reoviruses that carry a mutation in the S4 gene such as those described by Clark et al. (2006, J. Virol., 80:671-81), Ebert et al. (2001, J.
  • a mutation as referred to herein can be a substitution or an insertion or deletion of one or more nucleotides.
  • Point mutations include, for example, single nucleotide transitions (purine to purine or pyrimidine to pyrimidine) or transversions (purine to pyrimidine or vice versa) and single- or multiple-nucleotide deletions or insertions.
  • a mutation in a nucleic acid can result in one or more conservative or non-conservative amino acid substitutions in the encoded polypeptide, which may result in conformational changes or loss or partial loss of function, a shift in the reading frame of translation ("frame-shift") resulting in an entirely different polypeptide encoded from that point on, a premature stop codon resulting in a truncated polypeptide ("truncation"), or a mutation in a reovirus nucleic acid may not change the encoded polypeptide at all ("silent” or "nonsense”). See, for example, Johnson & Overington, 1993, J. MoL Biol, 233:716-38; Henikoff & Henikoff, 1992, Proc. Natl. Acad. ScL USA, 89:10915-19; and U.S. Patent No. 4,554,101 for disclosure on conservative and non-conservative amino acid substitutions.
  • Mutations can be generated in the nucleic acid of a reovirus using any number of methods known in the art.
  • site directed mutagenesis can be used to modify a reovirus nucleic acid sequence.
  • One of the most common methods of site-directed mutagenesis is oligonucleo tide- directed mutagenesis.
  • oligonucleotide-directed mutagenesis an oligonucleotide encoding the desired change(s) in sequence is annealed to one strand of the DNA of interest and serves as a primer for initiation of DNA synthesis. In this manner, the oligonucleotide containing the sequence change is incorporated into the newly synthesized strand. See, for example, Kunkel, 1985, Proc.
  • nucleic acids containing a mutation can be generated using PCR or chemical synthesis, or polypeptides having the desired change in amino acid sequence can be chemically synthesized. See, for example, Bang & Kent, 2005, Proc. Natl. Acad. ScL USA, 102:5014-9 and references therein.
  • a mutant reovirus as described herein also can contain one or more further mutations (e.g., a second, third, or fourth mutation) in one of the other reovirus capsid polypeptides (e.g., mul, Iambda2, and/or sigmal).
  • Reoviruses containing a mutation affecting the sigma3 polypeptide and, optionally, a further mutation in any or all of the other outer capsid proteins can be screened for the ability of such mutant reoviruses to infect and cause lysis of cells.
  • neoplastic cells that are resistant to lysis by wild type reovirus can be used to screen for mutant reoviruses described herein.
  • a further mutation can reduce or essentially eliminate expression of a mul polypeptide or result in the absence of a functional mul polypeptide.
  • the mul polypeptide which is encoded by the M2 gene, is likely involved in cell penetration and may play a role in transcriptase activation.
  • Each virion contains about 600 copies of mul polypeptides, which are present in the form of 1 : 1 complexes with sigma3 polypeptides.
  • the mul polypeptide is myristolated on its N-terminus, and then the myristolated N-terminal 42 residues are cleaved off, resulting in a C-terminal fragment (mul C).
  • a further mutation can reduce or essentially eliminate expression of a Iambda2 polypeptide or result in the absence of a functional Iambda2 polypeptide, and/or a further mutation can reduce or essentially eliminate expression of a sigmal polypeptide or result in the absence of a functional sigmal polypeptide.
  • the Iambda2 polypeptide is encoded by the L2 gene and is involved in particle assembly, and exhibits guanylyltransferase and methyltransferase activity.
  • the sigmal polypeptide is encoded by the S 1 gene and is involved in cell-attachment and serves as the viral hemagglutinin.
  • nucleic acids from reovirus particles can be isolated using standard commercially available nucleic acid methodology. See also, for example, Schiff et al., "Orthoreoviruses and Their Replication," Ch 52, in Fields Virology, Knipe & Howley, eds., 2006, Lippincott Williams & Wilkins.
  • isolated nucleic acids refer to nucleic acids that are separated from other nucleic acids with which they are usually associated.
  • an isolated nucleic acid includes, without limitation, reoviral nucleic acid that is essentially free of non-reo viral (e.g., host cell) nucleic acid, or a reoviral genomic segment that is essentially free of nucleic acid corresponding to other genomic segments, hi addition, an isolated nucleic acid can include an engineered nucleic acid such as a recombinant or synthetic nucleic acid.
  • a mutant reovirus as described herein can be generated by reconstituting genome segments containing at least a first mutation affecting the sigma3 polypeptide, which produces an infectious subviral particle (ISVP; e.g., a genetically-engineered ISVP) using methods known in the art. See, for example, Schiff et al., "Orthoreoviruses and Their Replication," Ch 52, in Fields Virology, Knipe & Howley, eds., 2006, Lippincott Williams & Wilkins; Smith et al., 1969, Virology, 39(4):791-810; and U.S. Patent Nos. 7,186,542; 7,049,127; 6,808,916; and 6,528,305.
  • ISVP infectious subviral particle
  • a mutant reovirus also can be generated by expressing the reovirus genome segments using a plasmid-based reverse genetic system to produce an ISVP. See, for example, Kobayashi et al., 2007, Cell Host & Microbe, 1 : 147-57.
  • a genetically-engineered or mutant ISVP is a mutant reovirus and refers to an ISVP generated from a reovirus carrying a genetically-engineered or a spontaneously generated mutation affecting at least the sigma3 polypeptide.
  • the ISVPs described herein are stable and can be propagated as ISVPs for multiple (e.g., more than one, e.g., 2, 3, 4, 5, 10, 20, 50, or more) passages.
  • mutant reoviruses described herein produced via a genetically-engineered ISVP or via a plasmid-based reverse genetic system, can be cultured in, for example, human neoplastic cells or L929 mouse fibroblast cells.
  • Mutant reoviruses disclosed herein can be cultured in cells that are only permissive to reovirus strains lacking the sigma3 polypeptide. Using such cell lines to passage the mutant reoviruses described herein can allow for selection of the mutants and also can be used to reduce or prevent reversions of the mutation(s).
  • Mutant reoviruses can be purified using standard methodology. See, for example, Schiff et al., "Orthoreoviruses and Their Replication," Ch 52, in Fields Virology, Knipe & Howley, eds., 2006, Lippincott Williams & Wilkins; Smith et al., 1969, Virology, 39(4):791-810; and U.S. Patent Nos. 7,186,542; 7,049,127; 6,808,916; and 6,528,305.
  • Affinity chromatography can be used with, for example, an antibody directed toward the sigma3 polypeptide to remove reoviruses that contain the sigma3 polypeptide and to allow the mutants lacking the sigma3 polypeptide to flow-through.
  • purified mutant reoviruses refer to reoviruses that have been separated from cellular components that naturally accompany them. Typically, reoviruses are considered purified when they are at least 70% (e.g., at least 75%, 80%, 85%, 90%, 95%, or 99%) by dry weight, free from the proteins and other cellular components with which they are naturally associated.
  • the mutant reoviruses described herein exhibit increased infectivity and/or decreased immunogenicity as compared to a non-mutant reovirus (e.g., a control reovirus) and can be selected on the basis of such traits. Increased infectivity can be evidenced by an increase in the range of neoplastic cells and/or the number of cells that are infected by a mutant reovirus compared to a reovirus that expresses a functional sigma3 polypeptide (e.g., an intact virion; e.g., a wild type reovirus).
  • a functional sigma3 polypeptide e.g., an intact virion; e.g., a wild type reovirus.
  • mutant reoviruses described herein also can be screened and selected for other desirable traits including, but not limited to, a faster rate of replication; a faster rate of packaging; the ability to induce apoptosis; the ability to affect lysis in and effectively kill human neoplastic cells lines; the ability to release effective tumor epitopes; interaction with standard chemotherapies; and an increased number of viral progeny.
  • mutant reoviruses can be selected for the ability to lytically infect a neoplastic cell (e.g., a mammalian cell having an active Ras pathway). See, for example, U.S. Patent No. 7,052,832.
  • reoviruses use a host cell's Ras pathway machinery to downregulate double-stranded RNA- activated protein kinase (PKR) and thus replication in the cell.
  • PLR protein kinase
  • a proliferative disorder is any cellular disorder in which the cells proliferate more rapidly than normal tissue growth.
  • a proliferating cell is a cell that is proliferating more rapidly than normal cells.
  • a proliferative disorder includes, but is not limited to, neoplasms, which are also referred to as tumors.
  • a neoplasm can include, but is not limited to, pancreatic cancer, breast cancer, brain cancer (e.g., glioblastoma), lung cancer, prostate cancer, colorectal cancer, thyroid cancer, renal cancer, adrenal cancer, liver cancer, neurofibromatosis 1, and leukemia.
  • a neoplasm can be a solid neoplasm (e.g., sarcoma or carcinoma) or a cancerous growth affecting the hematopoietic system (e.g., lymphoma or leukemia).
  • Other proliferative disorders include, but are not limited to neurofibromatosis.
  • the proliferating cells may have a mutation in which the Ras gene (or an element of the Ras signaling pathway) is activated, either directly (e.g., by an activating mutation in Ras) or indirectly (e.g., by activation of an upstream or downstream element in the Ras pathway).
  • Activation of an upstream element in the Ras pathway includes, for example, transformation with epidermal growth factor receptor (EGFR) or Sos. See, for example, Wiessmuller & Wittinghofer, 1994, Cellular Signaling, 6(3):247-267; and Barbacid, 1987, Ann. Rev. Biochem., 56, 779-827.
  • EGFR epidermal growth factor receptor
  • Activation of a downstream element in the Ras pathway includes, for example, mutation within B-Raf. See, for example, Brose et al. (2002, Cancer Res., 62:6997-7000).
  • the reovirus is useful for treating proliferative disorders caused by mutations or dysregulation of PKR. See, for example, Strong et al. (1998, EMBO J., 17:3351-62).
  • the mutant reoviruses described herein can be administered to a mammal that has a proliferative disorder.
  • administration refers to delivery of a mutant reovirus (e.g., an ISVP) such that the mutant reovirus contacts the proliferating cells.
  • the route by which a mutant reovirus is administered will depend on the type of disorder and the location of the proliferating cells. A wide variety of administration routes can be employed, and the following are provided simply by way of example and are not meant to be limiting in any way.
  • a mutant reovirus can be administered by methods that include direct injection into the tumor or systemic administration (e.g., intravenously) by injection, infusion or the like
  • a mutant reovirus can be administered intravenously or intravascularly.
  • a mutant reovirus can be administered in a manner such that it is transported systemically through the body (e.g., intrathecally, intravenously or intramuscularly).
  • a mutant reovirus also can be administered subcutaneously, intraperitoneally (e.g., for ovarian neoplasms), topically (e.g., for melanomas), orally (e.g., for oral or esophageal neoplasms), rectally (e.g., for colorectal neoplasms), vaginally (e.g., for cervical or vaginal neoplasms), nasally or by inhalation spray (e.g., for lung neoplasms).
  • a mutant reovirus can be administered by more than one route and/or to more than one location in a subject.
  • a mutant reovirus as disclosed herein is administered in an amount that is sufficient to treat the proliferative disorder (e.g., an effective amount).
  • a proliferative disorder is treated when administration of a mutant reovirus to proliferating cells affects lysis (e.g., oncolysis) of the cells, resulting in a reduction in the number of proliferating cells, a reduction in the size of a neoplasm, and/or a reduction in or elimination of symptoms (e.g., pain) associated with the proliferating disorder.
  • lysis e.g., oncolysis
  • the term oncolysis means at least 10% of the proliferating cells are lysed (e.g., at least about 20%, 30%, 40%, 50%, or 75% of the cells are lysed).
  • the percentage of lysis can be determined, for example, by measuring the reduction in the size of a neoplasm or in the number of proliferating cells in a mammal, or by measuring the amount of lysis of cells in vitro (e.g., from a biopsy of the proliferating cells).
  • An effective amount of a mutant reovirus will be determined on an individual basis and may be based, at least in part, on the particular mutant reovirus used; the individual's size, age, gender; and the size and other characteristics of the proliferating cells.
  • approximately 10 to 10 plaque forming units (PFU) of a mutant reovirus can be used, depending on the type, size and number of proliferating cells or neoplasms present.
  • the effective amount can be, for example, from about 1.0 PFU/kg body weight to about 10 15 PFU/kg body weight (e.g., from about 10 2 PFU/kg body weight to about 10 13 PFU/kg body weight).
  • a mutant reovirus can be administered in a single dose or in multiple doses (e.g., two, three, four, six, or more doses). Multiple doses can be administered concurrently or consecutively (e.g., over a period of days or weeks). Treatment with a mutant reovirus may last from several days to several months or until diminution of the disease is achieved.
  • a mutant reovirus as disclosed herein can be administered in conjunction with surgery or removal of proliferating cells (e.g., a neoplasm). It also is contemplated that a mutant reovirus can be administered in conjunction with or in addition to radiation therapy. It is further contemplated that a mutant reovirus can be administered in conjunction with or in addition to anticancer compounds, chemotherapeutic agents, and/or immunosuppressive agents.
  • Such agents include, but are not limited to, 5-fluorouracil, mitomycin C, methotrexate, hydroxyurea, gemcitabine, cyclophosphamide, dacarbazine, mitoxantrone, anthracyclins (e.g., epirubicin and doxurubicin), tubulin-stabilizing agents (e.g., vinca alkaloids), antibodies to receptors such as HERCEPTIN® (Genentech, South San Francisco, CA), etoposide and pregnasome, platinum compounds such as carboplatin and cisplatin, taxanes such as TAXOL® (Bristol-Myers Squibb, New York, NY) and TAXOTERE® (Rhone-Poulenc Rorer SA, Antony, France), hormone therapies such as tamoxifen and anti-estrogens, interferons, aromatase inhibitors, progestational agents and LHRH analogs.
  • a mutant reovirus as disclosed herein can be administered in conjunction with or in addition to vascular permeability agents such as, without limitation, IL-2, TNF-alpha, VEGF, AVASTIN® (Genentech), and relaxin.
  • vascular permeability agents such as, without limitation, IL-2, TNF-alpha, VEGF, AVASTIN® (Genentech), and relaxin.
  • compositions that include a mutant reovirus as described herein are provided. See, for example, U.S. Patent No. 6,576,234.
  • a pharmaceutical composition typically includes a pharmaceutically acceptable carrier.
  • a pharmaceutically acceptable carrier can be a solid, semi-solid, or liquid material that can act as a vehicle, carrier or medium for the mutant reovirus.
  • compositions containing a mutant reovirus can be in the form of tablets, pills, powders, lozenges, sachets, cachets, elixirs, suspensions, emulsions, solutions, syrups, aerosols (as a solid or in a liquid medium), ointments containing, for example, up to 10% by weight of the active compound, soft and hard gelatin capsules, suppositories, sterile injectable solutions, and sterile packaged powders.
  • suitable carriers include phosphate-buffered saline or another physiologically acceptable buffer, lactose, dextrose, sucrose, sorbitol, mannitol, starches, gum acacia, calcium phosphate, alginates, tragacanth, gelatin, calcium silicate, microcrystalline cellulose, polyvinylpyrrolidone, cellulose, sterile water, syrup, and methyl cellulose.
  • a pharmaceutical composition additionally can include, without limitation, lubricating agents such as talc, magnesium stearate, and mineral oil; wetting agents; emulsifying and suspending agents; preserving agents such as methyl- and propylhydroxy-benzoates; sweetening agents; and flavoring agents.
  • compositions can be formulated to provide quick, sustained or delayed release of a mutant reovirus after administration by employing procedures known in the art.
  • suitable formulations for use in a pharmaceutical composition can be found in Remington: The Science and Practice of Pharmacy (2003, Gennaro & Gennaro, eds., Lippincott Williams & Wilkens).
  • a mutant reovirus can be mixed with a pharmaceutical carrier to form a solid composition.
  • tablets or pills can be coated or otherwise compounded to provide a dosage form affording the advantage of prolonged action.
  • a tablet or pill can comprise an inner dosage and an outer dosage component, the latter being in the form of an envelope over the former.
  • the two components can be separated by an enteric layer which serves to resist disintegration in the stomach and permit the inner component to pass intact into the duodenum or to be delayed in release.
  • enteric layers or coatings such materials including a number of polymeric acids and mixtures of polymeric acids with such materials as shellac, cetyl alcohol, and cellulose acetate.
  • Liquid formulations that include a mutant reovirus for oral administration or for injection generally include aqueous solutions, suitably flavored syrups, aqueous or oil suspensions, and flavored emulsions with edible oils such as corn oil, cottonseed oil, sesame oil, coconut oil, or peanut oil, as well as elixirs and similar pharmaceutical vehicles.
  • Compositions for inhalation or insufflation include solutions and suspensions in pharmaceutically acceptable, aqueous or organic solvents, or mixtures thereof, and powders. These liquid or solid compositions may contain suitable pharmaceutically acceptable excipients as described herein. Such compositions can be administered by the oral or nasal respiratory route for local or systemic effect.
  • compositions in pharmaceutically acceptable solvents may be nebulized by use of inert gases. Nebulized solutions may be inhaled directly from the nebulizing device or the nebulizing device may be attached to a face mask tent or intermittent positive pressure breathing machine. Solution, suspension, or powder compositions may be administered, orally or nasally, from devices which deliver the formulation in an appropriate manner.
  • transdermal delivery devices e.g., patches
  • transdermal patches may be used to provide continuous or discontinuous infusion of a mutant reovirus as described herein.
  • the construction and use of transdermal patches for the delivery of pharmaceutical agents is well known in the art. See, for example, U.S. Patent No. 5,023,252.
  • patches can be constructed for continuous, pulsatile, or on-demand delivery of mutant reo viruses.
  • Mutant reo viruses can, if necessary, be coated in a liposome or micelle to reduce or prevent an immune response in a mammal that has developed immunity toward a reovirus.
  • Such compositions are referred to as immunoprotected reoviruses.
  • a mutant reovirus as disclosed herein e.g., one that lacks or is deficient in sigma3 polypeptide or function
  • Mutant reoviruses or a pharmaceutical composition comprising such mutant reoviruses can be packaged into a kit. It is contemplated that a kit also can include one or more chemotherapeutic agents, one or more immunosuppressive agents, and/or one or more anti-antireovirus antibodies.
  • a pharmaceutical composition can be formulated in a unit dosage form.
  • unit dosage forms refers to physically discrete units suitable as unitary dosages for human subjects and other mammals, each unit containing a predetermined quantity of a mutant reovirus calculated to produce the desired therapeutic effect in association with a suitable pharmaceutically acceptable carrier.
  • a construct that expresses a mutant form of the S4 gene under the control of a constitutive or an inducible promoter is generated such that the plus-strand RNA is transcribed, hi one example, the start codon for translation of the S4 gene is mutated by deletion, insertion or substitution.
  • a reovirus-susceptible cell line then is transformed with the construct.
  • the transformed cell line is infected with a reovirus and, if necessary, expression of the S4 gene is induced.
  • the plus-strand S4 RNA containing the mutation is a substrate for the viral RNA- dependent RNA polymerase, which generates double-stranded mutant S4 RNAs that are packaged but are non-functional, at least with respect to incorporation of the encoded sigma3 polypeptide into a capsid.
  • Progeny virus from the transformed cell include both wild-type reovirus that express the sigma3 polypeptide as well as mutant reovirus that do not express the sigma3 polypeptide.
  • a mutant reovirus that does not express the sigma3 polypeptide is referred to occasionally as a naked reovirus.
  • the naked viruses are selected, for example, using a plaque titration assay with a cell line that has demonstrated a block in the uncoating step. In such a cell line, the wild-type virus is not able to effectively replicate. The largest plaque is selected and expanded.
  • the wild type reovirus is purified out using affinity chromatography with antibodies directed against the sigma3 polypeptide. The presence or absence of the sigma3 polypeptide is determined by Western blotting and/or immunoprecipitation.

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ES08748334.3T ES2611455T3 (es) 2007-05-21 2008-05-21 Reovirus mutantes y métodos de elaboración y uso
JP2010508676A JP2010527593A (ja) 2007-05-21 2008-05-21 変異レオウイルスならびにその作製および使用方法
EP08748334.3A EP2150613B1 (en) 2007-05-21 2008-05-21 Mutant reoviruses and methods of making and using
CN200880016669A CN101679953A (zh) 2007-05-21 2008-05-21 突变的呼肠孤病毒及其制备和使用方法
DK08748334.3T DK2150613T3 (en) 2007-05-21 2008-05-21 MUTANT REOVIRA AND PROCEDURES FOR THEIR PREPARATION AND APPLICATION
HK10101956.8A HK1136006B (en) 2007-05-21 2008-05-21 Mutant reoviruses and methods of making and using
AU2008253505A AU2008253505B2 (en) 2007-05-21 2008-05-21 Mutant reoviruses and methods of making and using
CA2680661A CA2680661C (en) 2007-05-21 2008-05-21 Mutant reoviruses and methods of making and using
MX2009012420A MX2009012420A (es) 2007-05-21 2008-05-21 Reovirus mutantes y metodos para elaboracion y uso.
IL200690A IL200690A (en) 2007-05-21 2009-09-02 Mutant viruses and methods for their creation and use
ZA2009/07017A ZA200907017B (en) 2007-05-21 2009-10-08 Mutant reoviruses and methods of making and using

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Cited By (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2009050573A3 (en) * 2007-10-20 2009-08-13 Academisch Ziekenhuis Leiden L Viral modification of reoviridae
US11077157B2 (en) 2016-02-16 2021-08-03 Osaka University Medicinal composition for treating fibrosis
EP4268837A4 (en) * 2020-12-22 2025-05-07 Virocure, Inc. NEW MODIFIED REOVIRUS AND ITS USE

Families Citing this family (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP2011500608A (ja) * 2007-10-22 2011-01-06 オンコリティクス バイオテク,インコーポレーテッド 増殖性障害の治療レジメン
EP2296678A4 (en) * 2008-05-27 2012-03-21 Oncolytics Biotech Inc MODULATION OF INTERSTITIAL PRESSURE AND ONCOLYTIC VIRUS RELIEF AND DISTRIBUTION
WO2009143611A1 (en) * 2008-05-27 2009-12-03 Oncolytics Biotech Inc. Abrogating proinflammatory cytokine production during oncolytic reovirus therapy
EP2646051A4 (en) 2010-12-02 2014-05-28 Oncolytics Biotech Inc FORMULATIONS OF LIQUID VIRUSES
MX349294B (es) 2010-12-02 2017-07-21 Oncolytics Biotech Inc Formulaciones virales liofilizadas.
DK3068411T3 (da) 2013-11-15 2020-06-22 Oncolytics Biotech Inc Oncolytiske vira og forøget cancerbehandlingsregimer
KR20210098202A (ko) * 2020-01-31 2021-08-10 바이로큐어 주식회사 레오바이러스를 유효성분으로 포함하는 대장염의 예방 또는 치료용 조성물

Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2005111200A1 (en) * 2004-05-17 2005-11-24 Universite De Montreal Novel strains of reoviruses and methods of uses thereof
US7163678B2 (en) * 2002-11-07 2007-01-16 Oncolytics Biotech Inc. Reovirus for the treatment of ral-mediated cellular proliferative disorders
WO2007099401A2 (en) * 2005-08-01 2007-09-07 University Technologies International, Inc. Oncolytic attenuated reoviruses for treatment of proliferative disorders

Family Cites Families (9)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4554101A (en) * 1981-01-09 1985-11-19 New York Blood Center, Inc. Identification and preparation of epitopes on antigens and allergens on the basis of hydrophilicity
US5023252A (en) * 1985-12-04 1991-06-11 Conrex Pharmaceutical Corporation Transdermal and trans-membrane delivery of drugs
US6110461A (en) * 1997-08-13 2000-08-29 Oncolytics Biotech Inc. Reovirus for the treatment of neoplasia
US6136307A (en) * 1997-08-13 2000-10-24 Oncolytics Biotech Inc. Reovirus for the treatment of cellular proliferative disorders
US6565831B1 (en) * 1999-02-24 2003-05-20 Oncolytics Biotech Inc. Methods for preventing reovirus recognition for the treatment of cellular proliferative disorders
DE69937999T2 (de) * 1998-06-12 2009-01-29 Avir Green Hills Biotechnology Research Development Trade Ag Interferon induzierende genetisch veränderte attenuierte viren
TWI289158B (en) * 2000-08-10 2007-11-01 Oncolytics Biotech Inc Method of producing infectious reovirus
NZ524937A (en) * 2000-11-09 2004-10-29 Oncolytics Biotech Inc Methods for determining susceptibility of a cell to reovirus infection and for diagnosing proliferative disease treatable with reovirus
IL157304A0 (en) * 2001-03-16 2004-02-19 Oncolytics Biotech Inc Method of extracting virus from cell culture

Patent Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7163678B2 (en) * 2002-11-07 2007-01-16 Oncolytics Biotech Inc. Reovirus for the treatment of ral-mediated cellular proliferative disorders
WO2005111200A1 (en) * 2004-05-17 2005-11-24 Universite De Montreal Novel strains of reoviruses and methods of uses thereof
WO2007099401A2 (en) * 2005-08-01 2007-09-07 University Technologies International, Inc. Oncolytic attenuated reoviruses for treatment of proliferative disorders

Non-Patent Citations (6)

* Cited by examiner, † Cited by third party
Title
CHANDRAN; NIBERT, J. VIRAL, vol. 72, 1998, pages 467 - 75
CLARK K. ET AL.: "Reovirus variants selected for resistance to ammonium chloride have mutations in viral outer-capsid protein sigma3", J. VIROLOGY, vol. 80, no. 2, January 2006 (2006-01-01), pages 671 - 681, XP008117574 *
EBERT D.H. ET AL.: "Adaptation of reovirus to growth in the presence of protease inhibitor E64 segregates with a mutation in the carboxy terminus of viral outer-capsid protein sigma3", J. VIROLOGY, vol. 75, no. 7, April 2001 (2001-04-01), pages 3197 - 3206, XP002477299 *
GOLDEN ET AL., J. VIRAL., vol. 76, 2002, pages 7430 - 43
See also references of EP2150613A4
WETZEL J.D. ET AL.: "Reovirus variants selected during persistent infections of L cells contain mutations in the viral S1 and S4 genes and are altered in viral disassembly", J. VIROLOGY, vol. 71, no. 2, February 1997 (1997-02-01), pages 1362 - 1369, XP008117575 *

Cited By (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2009050573A3 (en) * 2007-10-20 2009-08-13 Academisch Ziekenhuis Leiden L Viral modification of reoviridae
US11077157B2 (en) 2016-02-16 2021-08-03 Osaka University Medicinal composition for treating fibrosis
EP4268837A4 (en) * 2020-12-22 2025-05-07 Virocure, Inc. NEW MODIFIED REOVIRUS AND ITS USE

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MX2009012420A (es) 2009-12-09
IL200690A (en) 2014-02-27
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AU2008253505B2 (en) 2014-09-04
EP2150613A1 (en) 2010-02-10
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US20080292594A1 (en) 2008-11-27
CN104195115A (zh) 2014-12-10
ZA200907017B (en) 2010-12-29
AU2008253505A1 (en) 2008-11-27
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CA2680661C (en) 2018-05-29
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DK2150613T3 (en) 2017-01-30

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