WO2008045819A3 - Détection et identification d'organismes par analyse de séquences d'acides nucléiques - Google Patents

Détection et identification d'organismes par analyse de séquences d'acides nucléiques Download PDF

Info

Publication number
WO2008045819A3
WO2008045819A3 PCT/US2007/080685 US2007080685W WO2008045819A3 WO 2008045819 A3 WO2008045819 A3 WO 2008045819A3 US 2007080685 W US2007080685 W US 2007080685W WO 2008045819 A3 WO2008045819 A3 WO 2008045819A3
Authority
WO
WIPO (PCT)
Prior art keywords
nucleic acid
identification
detection
acid sequences
via analysis
Prior art date
Application number
PCT/US2007/080685
Other languages
English (en)
Other versions
WO2008045819A2 (fr
Inventor
Mekbib Astatke
Charles Quentin Davis
Original Assignee
Bioveris Corp
Mekbib Astatke
Charles Quentin Davis
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Bioveris Corp, Mekbib Astatke, Charles Quentin Davis filed Critical Bioveris Corp
Publication of WO2008045819A2 publication Critical patent/WO2008045819A2/fr
Publication of WO2008045819A3 publication Critical patent/WO2008045819A3/fr

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6827Hybridisation assays for detection of mutation or polymorphism
    • C12Q1/683Hybridisation assays for detection of mutation or polymorphism involving restriction enzymes, e.g. restriction fragment length polymorphism [RFLP]
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • C12Q1/6846Common amplification features

Landscapes

  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • Physics & Mathematics (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Immunology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)

Abstract

La présente invention concerne des procédés, des compositions et des trousses permettant d'identifier un ou plusieurs organismes dans un échantillon. L'invention porte sur une combinaison d'amplification d'acide nucléique, de détection de marqueurs, et de digestion d'enzyme de restriction de l'acide nucléique amplifié.
PCT/US2007/080685 2006-10-11 2007-10-08 Détection et identification d'organismes par analyse de séquences d'acides nucléiques WO2008045819A2 (fr)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US85065606P 2006-10-11 2006-10-11
US60/850,656 2006-10-11

Publications (2)

Publication Number Publication Date
WO2008045819A2 WO2008045819A2 (fr) 2008-04-17
WO2008045819A3 true WO2008045819A3 (fr) 2008-11-06

Family

ID=39283544

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US2007/080685 WO2008045819A2 (fr) 2006-10-11 2007-10-08 Détection et identification d'organismes par analyse de séquences d'acides nucléiques

Country Status (1)

Country Link
WO (1) WO2008045819A2 (fr)

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7975343B2 (en) 2002-09-20 2011-07-12 Colgate-Palmolive Company Toothbrush

Families Citing this family (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN112725534B (zh) * 2021-01-25 2022-05-06 中国疾病预防控制中心病毒病预防控制所 用于检测喀山病毒、哈扎拉病毒和伊塞克库尔病毒的引物探针、靶标组合、试剂盒和方法

Citations (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5994522A (en) * 1997-01-24 1999-11-30 Washington University BLNK proteins
US6004783A (en) * 1994-03-18 1999-12-21 The General Hospital Corporation Cleaved amplified RFLP detection methods
US20010023063A1 (en) * 1997-05-23 2001-09-20 Mark M. Richter Assays employing electrochemiluminescent labels and electrochemiluminescence quenchers
US20030228599A1 (en) * 1999-06-15 2003-12-11 Don Straus Genomic profiling: a rapid method for testing a complex biological sample for the presence of many types of organisms
US20040018491A1 (en) * 2000-10-26 2004-01-29 Kevin Gunderson Detection of nucleic acid reactions on bead arrays
US20040132044A1 (en) * 2001-05-07 2004-07-08 Menachem Ritterband Magnetic beads and uses thereof

Patent Citations (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6004783A (en) * 1994-03-18 1999-12-21 The General Hospital Corporation Cleaved amplified RFLP detection methods
US5994522A (en) * 1997-01-24 1999-11-30 Washington University BLNK proteins
US20010023063A1 (en) * 1997-05-23 2001-09-20 Mark M. Richter Assays employing electrochemiluminescent labels and electrochemiluminescence quenchers
US20030228599A1 (en) * 1999-06-15 2003-12-11 Don Straus Genomic profiling: a rapid method for testing a complex biological sample for the presence of many types of organisms
US20040018491A1 (en) * 2000-10-26 2004-01-29 Kevin Gunderson Detection of nucleic acid reactions on bead arrays
US20040132044A1 (en) * 2001-05-07 2004-07-08 Menachem Ritterband Magnetic beads and uses thereof

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7975343B2 (en) 2002-09-20 2011-07-12 Colgate-Palmolive Company Toothbrush

Also Published As

Publication number Publication date
WO2008045819A2 (fr) 2008-04-17

Similar Documents

Publication Publication Date Title
WO2007023461A3 (fr) Methode de detection de micro-organismes et de marqueurs de resistance aux antibiotiques et oligonucléotides d'acides nucleiques a cet effet
WO2008034110A3 (fr) Utilisation d'enzymes mutantes de type taq polymérase pour l'amplification d'adn en présence d'inhibiteurs de pcr
WO2006020579A3 (fr) Procede d'identification rapide de micro-organismes
WO2008124670A3 (fr) Compositions et procédés pour l'identification d'un gène de carbapénèmase
TW200720441A (en) New labelling strategies for the sensitive detection of analytes
WO2010059731A3 (fr) Cartographie et séquences de polynucléotide
WO2009086608A3 (fr) Procédé et kit pour effectuer une amplification par pcr et une détection de microréseau dans le même milieu et/ou la même chambre
WO2005098047A3 (fr) Compositions utilisables pour l'identification de bacteries
WO2009076238A3 (fr) Détermination efficace des bases dans les réactions de séquençage
WO2008048230A3 (fr) Procédés d'identification de cibles biologiques et instrumentation d'identification de cibles biologiques
ATE358733T1 (de) Schnell-verfahren zur detektion von mikroorganismen in lebensmittelproben
WO2009022125A8 (fr) Identification de séquences d'acide nucléique
WO2006119326A3 (fr) Compositions de sondes/amorces oligonucleotidiques et procedes de detection de polynucleotides
WO2009049007A3 (fr) Compositions, procédés et systèmes pour une identification rapide d'acides nucléiques pathogènes
WO2009057829A3 (fr) Ensemble d'amorces d'acides nucléiques pour la détection d'une souche de virus de l'hépatite b résistante aux médicaments, trousse de dosage et méthode de détection de souche de virus de l'hépatite b résistante aux médicaments
WO2008140829A3 (fr) Détection multiplex de pathogènes agricoles
WO2005090610A3 (fr) Procedes, kits et compositions relatifs a l'extinction de la fluorescence a l'aide de sondes pna
MY159867A (en) Detection and enumeration of microorganisms
WO2009092982A3 (fr) Procédé de détection et/ou d'identification de clostridium difficile
WO2005090596A3 (fr) Dosage pour la detection et l'identification de micro-organismes
WO2007060707A3 (fr) Reactifs et methode d'amplification et de detection simultanees d'acide nucleique
WO2005074522A3 (fr) Detection d'adn de ruminants par pcr
WO2005028680A3 (fr) Methodes, compositions, et trousses pour concentration et detection de micro-organismes
MY149655A (en) Detection and enumeration of microorganisms
WO2008045819A3 (fr) Détection et identification d'organismes par analyse de séquences d'acides nucléiques

Legal Events

Date Code Title Description
121 Ep: the epo has been informed by wipo that ep was designated in this application

Ref document number: 07843966

Country of ref document: EP

Kind code of ref document: A2

NENP Non-entry into the national phase

Ref country code: DE

122 Ep: pct application non-entry in european phase

Ref document number: 07843966

Country of ref document: EP

Kind code of ref document: A2