WO2006124673A3 - Identification de donnees statistiquement lineaires - Google Patents

Identification de donnees statistiquement lineaires Download PDF

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Publication number
WO2006124673A3
WO2006124673A3 PCT/US2006/018549 US2006018549W WO2006124673A3 WO 2006124673 A3 WO2006124673 A3 WO 2006124673A3 US 2006018549 W US2006018549 W US 2006018549W WO 2006124673 A3 WO2006124673 A3 WO 2006124673A3
Authority
WO
WIPO (PCT)
Prior art keywords
data
linear data
noise
identifying statistically
statistically linear
Prior art date
Application number
PCT/US2006/018549
Other languages
English (en)
Other versions
WO2006124673A2 (fr
Inventor
Jeffrey Lerner
Original Assignee
Bio Rad Laboratories
Jeffrey Lerner
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from US11/432,856 external-priority patent/US7647187B2/en
Application filed by Bio Rad Laboratories, Jeffrey Lerner filed Critical Bio Rad Laboratories
Priority to AU2006247597A priority Critical patent/AU2006247597B2/en
Priority to JP2008511434A priority patent/JP5091122B2/ja
Priority to CN2006800162194A priority patent/CN101292245B/zh
Priority to CA2603389A priority patent/CA2603389C/fr
Priority to EP06752532A priority patent/EP1880334A4/fr
Publication of WO2006124673A2 publication Critical patent/WO2006124673A2/fr
Publication of WO2006124673A3 publication Critical patent/WO2006124673A3/fr

Links

Classifications

    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06F—ELECTRIC DIGITAL DATA PROCESSING
    • G06F18/00—Pattern recognition
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions
    • C12Q1/6851—Quantitative amplification
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06F—ELECTRIC DIGITAL DATA PROCESSING
    • G06F2218/00—Aspects of pattern recognition specially adapted for signal processing
    • G06F2218/08—Feature extraction
    • G06F2218/10—Feature extraction by analysing the shape of a waveform, e.g. extracting parameters relating to peaks

Landscapes

  • Engineering & Computer Science (AREA)
  • Theoretical Computer Science (AREA)
  • General Engineering & Computer Science (AREA)
  • General Physics & Mathematics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Computer Vision & Pattern Recognition (AREA)
  • Data Mining & Analysis (AREA)
  • Evolutionary Biology (AREA)
  • Evolutionary Computation (AREA)
  • Physics & Mathematics (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Artificial Intelligence (AREA)
  • Complex Calculations (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
  • Management, Administration, Business Operations System, And Electronic Commerce (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Measurement And Recording Of Electrical Phenomena And Electrical Characteristics Of The Living Body (AREA)
  • Measuring Pulse, Heart Rate, Blood Pressure Or Blood Flow (AREA)
  • Radar Systems Or Details Thereof (AREA)

Abstract

Procédés, dispositifs et systèmes permettant de traiter une série de données à bruit pour déterminer si cette série présente un comportement statistiquement linéaire. On calcule un vrai signal de données sur la base de propriétés locales des données, puis une estimation du bruit des données est conduite à partir du vrai signal. Enfin, on compare une mesure du bruit estimé avec les propriétés d'un ajustement linéaire de la série de données.
PCT/US2006/018549 2005-05-13 2006-05-12 Identification de donnees statistiquement lineaires WO2006124673A2 (fr)

Priority Applications (5)

Application Number Priority Date Filing Date Title
AU2006247597A AU2006247597B2 (en) 2005-05-13 2006-05-12 Identifying statistically linear data
JP2008511434A JP5091122B2 (ja) 2005-05-13 2006-05-12 統計的線形データの同定
CN2006800162194A CN101292245B (zh) 2005-05-13 2006-05-12 识别统计线性数据的设备和方法
CA2603389A CA2603389C (fr) 2005-05-13 2006-05-12 Identification de donnees statistiquement lineaires
EP06752532A EP1880334A4 (fr) 2005-05-13 2006-05-12 Identification de donnees statistiquement lineaires

Applications Claiming Priority (4)

Application Number Priority Date Filing Date Title
US68118205P 2005-05-13 2005-05-13
US60/681,182 2005-05-13
US11/432,856 US7647187B2 (en) 2005-05-13 2006-05-11 Identifying statistically linear data
US11/432,856 2006-05-11

Publications (2)

Publication Number Publication Date
WO2006124673A2 WO2006124673A2 (fr) 2006-11-23
WO2006124673A3 true WO2006124673A3 (fr) 2008-04-17

Family

ID=37431939

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US2006/018549 WO2006124673A2 (fr) 2005-05-13 2006-05-12 Identification de donnees statistiquement lineaires

Country Status (6)

Country Link
EP (1) EP1880334A4 (fr)
JP (1) JP5091122B2 (fr)
CN (1) CN101292245B (fr)
AU (1) AU2006247597B2 (fr)
CA (1) CA2603389C (fr)
WO (1) WO2006124673A2 (fr)

Families Citing this family (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20090119020A1 (en) * 2007-09-25 2009-05-07 Roche Molecular Systems, Inc. Pcr elbow determination using quadratic test for curvature analysis of a double sigmoid
JPWO2009054474A1 (ja) * 2007-10-26 2011-03-10 凸版印刷株式会社 アレル判定装置及び方法、ならびに、コンピュータプログラム
JP5166608B2 (ja) * 2008-09-09 2013-03-21 バイオ−ラッド ラボラトリーズ，インコーポレイティド 多段階回帰ベースｐｃｒ解析システム
US8219366B2 (en) * 2009-08-26 2012-07-10 Roche Molecular Sytems, Inc. Determination of elbow values for PCR for parabolic shaped curves
JP5379044B2 (ja) * 2010-02-25 2013-12-25 株式会社日立ハイテクノロジーズ 自動分析装置
US10176293B2 (en) 2012-10-02 2019-01-08 Roche Molecular Systems, Inc. Universal method to determine real-time PCR cycle threshold values

Family Cites Families (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CA2139070C (fr) * 1994-12-23 2010-03-30 Burton W. Blais Methode pour ameliorer l'aptitude a la detection d'essais d'acide nucleique utilisant une reaction en chaine de polymerase
US6175602B1 (en) * 1998-05-27 2001-01-16 Telefonaktiebolaget Lm Ericsson (Publ) Signal noise reduction by spectral subtraction using linear convolution and casual filtering
AU2002232391A1 (en) * 2000-10-25 2002-05-06 City Of Hope Candidate region mismatch scanning for genotyping and mutation detection
US7228237B2 (en) * 2002-02-07 2007-06-05 Applera Corporation Automatic threshold setting and baseline determination for real-time PCR
US20050069904A1 (en) * 2003-09-29 2005-03-31 Stuart Peirson Analysis of real-time PCR data

Non-Patent Citations (2)

* Cited by examiner, † Cited by third party
Title
DHEDA ET AL.: "Validation of houskeeping genes for normalizing RNA expression in real-time PCR", BIOTECHNIQUES, vol. 37, 2004, pages 112 - 119, XP001525306 *
LIVAK ET AL.: "Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2-deltadeltaCT Method", METHODS, vol. 25, 2001, pages 402 - 408, XP003015637 *

Also Published As

Publication number Publication date
CA2603389C (fr) 2012-07-10
JP2008546048A (ja) 2008-12-18
AU2006247597A1 (en) 2006-11-23
AU2006247597B2 (en) 2010-02-11
CN101292245B (zh) 2013-04-17
EP1880334A2 (fr) 2008-01-23
JP5091122B2 (ja) 2012-12-05
CN101292245A (zh) 2008-10-22
EP1880334A4 (fr) 2010-01-20
WO2006124673A2 (fr) 2006-11-23
CA2603389A1 (fr) 2006-11-23

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