WO2005078133B1 - Adaptations logicielles ma-blup (marker assisted best linear unbiased predicted) destinees a des applications pratiques pour des populations importantes d'especes d'elevage - Google Patents
Adaptations logicielles ma-blup (marker assisted best linear unbiased predicted) destinees a des applications pratiques pour des populations importantes d'especes d'elevageInfo
- Publication number
- WO2005078133B1 WO2005078133B1 PCT/US2005/002362 US2005002362W WO2005078133B1 WO 2005078133 B1 WO2005078133 B1 WO 2005078133B1 US 2005002362 W US2005002362 W US 2005002362W WO 2005078133 B1 WO2005078133 B1 WO 2005078133B1
- Authority
- WO
- WIPO (PCT)
- Prior art keywords
- molecular genetic
- animals
- population
- data
- marker
- Prior art date
Links
- 230000001488 breeding Effects 0.000 title claims abstract 12
- 239000003550 marker Substances 0.000 title claims 17
- 241000894007 species Species 0.000 title 1
- 230000002068 genetic Effects 0.000 claims abstract 30
- 241001465754 Metazoa Species 0.000 claims abstract 18
- 238000004458 analytical method Methods 0.000 claims abstract 9
- 230000000694 effects Effects 0.000 claims abstract 4
- 230000001965 increased Effects 0.000 claims abstract 4
- 244000144980 herd Species 0.000 claims abstract 3
- 238000004590 computer program Methods 0.000 claims 11
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- 241000282887 Suidae Species 0.000 claims 4
- 235000013372 meat Nutrition 0.000 claims 4
- 238000007894 restriction fragment length polymorphism technique Methods 0.000 claims 4
- 238000000123 temperature gradient gel electrophoresis Methods 0.000 claims 4
- 229920000160 (ribonucleotides)n+m Polymers 0.000 claims 2
- 238000001712 DNA sequencing Methods 0.000 claims 2
- 238000002965 ELISA Methods 0.000 claims 2
- 229920001681 Heteroduplex Polymers 0.000 claims 2
- 102000001796 Melanocortin 4 receptor Human genes 0.000 claims 2
- 241000282898 Sus scrofa Species 0.000 claims 2
- 108010021436 Type 4 Melanocortin Receptor Proteins 0.000 claims 2
- 238000003935 denaturing gradient gel electrophoresis Methods 0.000 claims 2
- 229920003013 deoxyribonucleic acid Polymers 0.000 claims 2
- 238000003752 polymerase chain reaction Methods 0.000 claims 2
- 102000004169 proteins and genes Human genes 0.000 claims 2
- 108090000623 proteins and genes Proteins 0.000 claims 2
- 238000003753 real-time PCR Methods 0.000 claims 2
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- 229950006790 Adenosine phosphate Drugs 0.000 claims 1
- 108020003215 DNA Probes Proteins 0.000 claims 1
- 239000003298 DNA probe Substances 0.000 claims 1
- 101700011961 DPOM Proteins 0.000 claims 1
- 108010092799 EC 2.7.7.49 Proteins 0.000 claims 1
- 102100005410 LINE-1 retrotransposable element ORF2 protein Human genes 0.000 claims 1
- 101710029649 MDV043 Proteins 0.000 claims 1
- 108020004999 Messenger RNA Proteins 0.000 claims 1
- 229920002393 Microsatellite Polymers 0.000 claims 1
- 101700061424 POLB Proteins 0.000 claims 1
- 102000001708 Protein Isoforms Human genes 0.000 claims 1
- 108010029485 Protein Isoforms Proteins 0.000 claims 1
- 102000001253 Protein Kinases Human genes 0.000 claims 1
- 108060006633 Protein Kinases Proteins 0.000 claims 1
- 101700054624 RF1 Proteins 0.000 claims 1
- 108020004518 RNA Probes Proteins 0.000 claims 1
- 239000003391 RNA probe Substances 0.000 claims 1
- 102000004965 antibodies Human genes 0.000 claims 1
- 108090001123 antibodies Proteins 0.000 claims 1
- 238000004166 bioassay Methods 0.000 claims 1
- 230000015572 biosynthetic process Effects 0.000 claims 1
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- 238000000034 method Methods 0.000 abstract 1
Abstract
L'invention concerne des méthodologies destinées à améliorer l'analyse génétique moléculaire d'animaux individuels et de populations animales. L'invention concerne également des procédés et des systèmes qui permettent d'identifier, dans une population, les animaux qui sont le plus susceptibles de transmettre par voie génétique des caractéristiques souhaitées. L'invention concerne en outre des moyens qui permettent d'évaluer les valeurs reproductives estimées et d'augmenter la qualité génétique moyenne des animaux d'une population. Pour chaque caractéristique, l'invention prévoit des méthodes qui permettent d'évaluer l'effet relatif d'un ou plusieurs locus quantitatifs et d'au moins trois marqueurs génétiques moléculaires pour chaque locus quantitatif. La relation entre ces différents marqueurs et la caractéristique et le locus quantitatif présélectionnés est calculée, tout comme la contribution d'autres facteurs, tels que le pedigree, et des mesures connues par rapport à chaque caractéristique quantitative. Ces données sont ensuite utilisées pour calculer les valeurs reproductives estimées des animaux d'un troupeau et pour classer les animaux en fonction de ces valeurs reproductives estimées.
Priority Applications (4)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| EP05712016A EP1713324A2 (fr) | 2004-02-09 | 2005-01-27 | Adaptations logicielles ma-blup (marker assisted best linear unbiased predicted) destinees a des applications pratiques pour des populations importantes d'especes d'elevage |
| CA002554517A CA2554517A1 (fr) | 2004-02-09 | 2005-01-27 | Adaptations logicielles ma-blup (marker assisted best linear unbiased predicted) destinees a des applications pratiques pour des populations importantes d'especes d'elevage |
| BRPI0507533-5A BRPI0507533A (pt) | 2004-02-09 | 2005-01-27 | melhor prognóstico não polarizado linear auxiliado por marcador (ma-blup): adaptações de software para aplicações práticas para populações de reprodução grandes em espécies de animal de fazenda |
| US10/561,075 US20070105107A1 (en) | 2004-02-09 | 2005-01-27 | Marker assisted best linear unbiased prediction (ma-blup): software adaptions for large breeding populations in farm animal species |
Applications Claiming Priority (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US54303404P | 2004-02-09 | 2004-02-09 | |
| US60/543,034 | 2004-02-09 |
Publications (3)
| Publication Number | Publication Date |
|---|---|
| WO2005078133A2 WO2005078133A2 (fr) | 2005-08-25 |
| WO2005078133A3 WO2005078133A3 (fr) | 2006-03-16 |
| WO2005078133B1 true WO2005078133B1 (fr) | 2006-04-20 |
Family
ID=34860362
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| PCT/US2005/002362 WO2005078133A2 (fr) | 2004-02-09 | 2005-01-27 | Adaptations logicielles ma-blup (marker assisted best linear unbiased predicted) destinees a des applications pratiques pour des populations importantes d'especes d'elevage |
Country Status (6)
| Country | Link |
|---|---|
| US (1) | US20070105107A1 (fr) |
| EP (1) | EP1713324A2 (fr) |
| AR (1) | AR048404A1 (fr) |
| BR (1) | BRPI0507533A (fr) |
| CA (1) | CA2554517A1 (fr) |
| WO (1) | WO2005078133A2 (fr) |
Families Citing this family (18)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2004061125A2 (fr) | 2002-12-31 | 2004-07-22 | Mmi Genomics, Inc. | Compositions, procedes et systemes d'inference concernant des caracteristiques de bovins |
| WO2008025093A1 (fr) * | 2006-09-01 | 2008-03-06 | Innovative Dairy Products Pty Ltd | Évaluation génétique basée sur le génome entier et procédé de sélection |
| CA2673174C (fr) * | 2006-12-21 | 2016-11-08 | Agriculture Victoria Services Pty Limited | Procedes et reactifs de selection artificielle |
| EP1953658A1 (fr) * | 2007-01-09 | 2008-08-06 | ASG Veehouderij B.V. | Procédé pour l'estimation de la valeur d'élevage d'un organisme avec un phénotype inconnu |
| EP2178363A4 (fr) * | 2007-07-16 | 2010-07-21 | Pfizer | Procede d'amelioration d'indice de marqueur genomique pour animaux producteurs de lait et produits laitiers |
| US20090049856A1 (en) * | 2007-08-20 | 2009-02-26 | Honeywell International Inc. | Working fluid of a blend of 1,1,1,3,3-pentafluoropane, 1,1,1,2,3,3-hexafluoropropane, and 1,1,1,2-tetrafluoroethane and method and apparatus for using |
| EP3153030B1 (fr) | 2007-11-29 | 2019-03-27 | Monsanto Technology LLC | Produits de viande ayant des niveaux accrus d'acides gras bénéfiques |
| NZ591236A (en) * | 2008-08-19 | 2012-11-30 | Viking Genetics Fmba | Methods for determining a breeding value based on a plurality of genetic markers |
| US20100269216A1 (en) * | 2009-04-16 | 2010-10-21 | Syngenta Participations Ag | Network population mapping |
| US20110296753A1 (en) * | 2010-06-03 | 2011-12-08 | Syngenta Participations Ag | Methods and compositions for predicting unobserved phenotypes (pup) |
| US8874420B2 (en) * | 2010-11-30 | 2014-10-28 | Syngenta Participations Ag | Methods for increasing genetic gain in a breeding population |
| US8660888B2 (en) | 2013-04-13 | 2014-02-25 | Leachman Cattle of Colorado, LLC | System, computer-implemented method, and non-transitory, computer-readable medium to determine relative market value of a sale group of livestock based on genetic merit and other non-genetic factors |
| US20170032080A1 (en) * | 2013-12-19 | 2017-02-02 | Genoscoper | Method and arrangement for matching mammals by comparing genotypes |
| CN106305616A (zh) * | 2016-08-24 | 2017-01-11 | 鲁宗强 | 一种西南特种野猪的繁育方法 |
| CN110176274B (zh) * | 2019-05-09 | 2023-03-10 | 温氏食品集团股份有限公司 | 一种基于全基因组snp信息划分种猪血统的方法 |
| GB2599289A (en) * | 2019-05-14 | 2022-03-30 | Agriculture And Food Dev Authority Teagasc | A method and system for estimation of the breeding value of an animal for eating quality and/or commercial yield prediction |
| CN112002371B (zh) * | 2020-07-31 | 2023-09-26 | 中国农业科学院北京畜牧兽医研究所 | 一种白羽肉鸡剩余采食量的基因组选择方法 |
| CN116863998B (zh) * | 2023-06-21 | 2024-04-05 | 扬州大学 | 一种基于遗传算法的全基因组预测方法及其应用 |
Family Cites Families (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US20050065736A1 (en) * | 2003-07-15 | 2005-03-24 | Bauck Stewart William | Systems and methods for improving efficiencies in livestock production |
-
2005
- 2005-01-27 CA CA002554517A patent/CA2554517A1/fr not_active Abandoned
- 2005-01-27 WO PCT/US2005/002362 patent/WO2005078133A2/fr not_active Application Discontinuation
- 2005-01-27 US US10/561,075 patent/US20070105107A1/en not_active Abandoned
- 2005-01-27 EP EP05712016A patent/EP1713324A2/fr not_active Withdrawn
- 2005-01-27 BR BRPI0507533-5A patent/BRPI0507533A/pt not_active IP Right Cessation
- 2005-02-09 AR ARP050100455A patent/AR048404A1/es unknown
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