WO2005076945A3 - Method for identifying dna sequences from multi-trace of a sequencing reaction - Google Patents

Method for identifying dna sequences from multi-trace of a sequencing reaction Download PDF

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Publication number
WO2005076945A3
WO2005076945A3 PCT/US2005/003681 US2005003681W WO2005076945A3 WO 2005076945 A3 WO2005076945 A3 WO 2005076945A3 US 2005003681 W US2005003681 W US 2005003681W WO 2005076945 A3 WO2005076945 A3 WO 2005076945A3
Authority
WO
WIPO (PCT)
Prior art keywords
dna sequences
trace
sequencing reaction
identifying dna
identifying
Prior art date
Application number
PCT/US2005/003681
Other languages
French (fr)
Other versions
WO2005076945A2 (en
Inventor
Michael R Brent
Original Assignee
Univ Washington
Michael R Brent
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Univ Washington, Michael R Brent filed Critical Univ Washington
Publication of WO2005076945A2 publication Critical patent/WO2005076945A2/en
Publication of WO2005076945A3 publication Critical patent/WO2005076945A3/en

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Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10—Sequence alignment; Homology search

Abstract

The present invention is directed to methods of identifying one or more DNA sequences from a multi-trace output data of a DNA sequencing reaction.
PCT/US2005/003681 2004-02-05 2005-02-07 Method for identifying dna sequences from multi-trace of a sequencing reaction WO2005076945A2 (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US54224004P 2004-02-05 2004-02-05
US60/542,240 2004-02-05

Publications (2)

Publication Number Publication Date
WO2005076945A2 WO2005076945A2 (en) 2005-08-25
WO2005076945A3 true WO2005076945A3 (en) 2007-11-08

Family

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Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US2005/003681 WO2005076945A2 (en) 2004-02-05 2005-02-07 Method for identifying dna sequences from multi-trace of a sequencing reaction

Country Status (1)

Country Link
WO (1) WO2005076945A2 (en)

Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2003102211A2 (en) * 2002-05-30 2003-12-11 Chan Sheng Liu Method of detecting dna variation in sequence data

Patent Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2003102211A2 (en) * 2002-05-30 2003-12-11 Chan Sheng Liu Method of detecting dna variation in sequence data

Non-Patent Citations (2)

* Cited by examiner, † Cited by third party
Title
ALLEX ET AL.: "Proceedings of the Fourth International Conference on Intelligent Systems for Molecular Biology", AAAI PRESS, 1996, pages 3 - 14 *
BONFIELD ET AL., NUCLEIC ACIDS RESEARCH, vol. 26, no. 14, 1998, pages 3404 - 3409 *

Also Published As

Publication number Publication date
WO2005076945A2 (en) 2005-08-25

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