WO2005007683A1 - Antigen epitopes of the regulatory protein of virulence factor in staphylococcus aureus and their mimotopes and use - Google Patents
Antigen epitopes of the regulatory protein of virulence factor in staphylococcus aureus and their mimotopes and use Download PDFInfo
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- WO2005007683A1 WO2005007683A1 PCT/CN2003/000827 CN0300827W WO2005007683A1 WO 2005007683 A1 WO2005007683 A1 WO 2005007683A1 CN 0300827 W CN0300827 W CN 0300827W WO 2005007683 A1 WO2005007683 A1 WO 2005007683A1
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- WIPO (PCT)
- Prior art keywords
- epitope
- sequence
- trap
- staphylococcus aureus
- amino acid
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
- C07K14/195—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from bacteria
- C07K14/315—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from bacteria from Streptococcus (G), e.g. Enterococci
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P31/00—Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
- A61P31/04—Antibacterial agents
Definitions
- Antigen epitope its mimetic epitope and uses
- the invention relates to an antigenic epitope and a mimetic epitope, in particular to two antigenic epitopes of a Staphylococcus aureus (S. aureus) virulence factor regulating protein and their mimetic epitopes.
- the present invention also relates to the use of polypeptides with the same amino acid sequence as these epitopes in the preparation of anti-S. Aureus infection drugs or vaccines. Background technique
- Staphylococcus aureus is a common class of Gram-positive pathogens, and it is one of the main microorganisms that cause fatal diseases such as burns and war wounds infection, pneumonia, endocarditis, sepsis, and toxic shock. More than millions of S. aureus infections occur in hospitals each year. At present, the treatment of Staphylococcus aureus is mostly combined with antibiotics, but the effect is not satisfactory. Because Staphylococcus aureus easily develops drug resistance and there is no good solution, many commonly used antibiotics are not effective. Controlling S. aureus infection is one of the problems to be solved in clinical medicine.
- RNAIII activates gene transcription of virulence factors and regulates translation of virulence factors through base complementation.
- RNAIII activating protein RNA III activating protein
- RAP protein activating protein
- Staphylococcus aureus virulence stimulating factor Staphylococcus aureus continues to secrete RAP, and it only activates virulence factors when RAP reaches a certain concentration. Staphylococcus aureus without RAP is not pathogenic in itself.
- New research finds that RAP activates RNAIII transcription A 21KD protein called TRAP (Target of RNAIII activating protein) was mediated.
- TRAP is composed of 167 amino acids and has His kinase activity. TRAP protein begins to phosphorylate in the early stages of S. aureus growth and reaches its maximum level in the middle of logarithmic growth. After RAP, signal transduction is performed through autophosphorylation, which mediates the rise of intracellular RNAIII levels and accelerates the secretion of S. aureus exotoxin (Naomi B, et al, J. Biol. Chem 2001, 276: 2658-2667 ). It can be seen that TRAP protein also plays a key role in the regulation of toxin expression in S. aureus. A 2001 study found that antibodies to TRAP can effectively reduce the secretion of S. aureus exotoxin (Oleny V, et al. Peptides 2001, 22: 1621-1627).
- the epitope as the target structure recognized by immune cells and the material basis for stimulating specific immune responses, is of great significance for related research on immune response.
- the emergence of the concept of "mimotope” not only provided clues for the analysis of antigenic epitopes, but also opened up a new idea for the development of vaccine research. Mimotope, usually refers to a polypeptide structure capable of mimicking an epitope of an antigen.
- Phage display peptide library The display technology displays randomly arranged exogenous peptides (usually composed of 6 to 15 amino acid residues) on the surface of a phage to form a random peptide library with a diversity of 10 7 or more.
- target peptides such as monoclonal antibodies, polyclonal antibodies
- binding peptides are screened from the phage peptide library, and the binding peptides are compared with natural antigens, some of which are related to natural epitopes Highly homologous, some are completely different from natural antigens, but all have similar antigenicity and immunogenicity to natural antigens.
- binding peptides are called "mimetic epitopes”.
- phage display technology has strong advantages. It is not only simple and fast, but also has a wide range of applications.
- the screening process using polyclonal antibodies or antisera as targets is more difficult, but has obvious advantages. It is manifested as follows: First, the target is easy to obtain, compared with the preparation of monoclonal antibodies, it takes less time, costs are lower, and the operation is simpler. Second, multiple epitopes can be obtained, and the screening efficiency is high, which is conducive to the preparation of highly immunogenic antibodies. Compound vaccine. In this experiment, the antiserum was purified by immunoaffinity chromatography, and the non-specific antibodies were removed to obtain highly specific sorting molecules, which is conducive to sorting into specific phage clones and reducing the enrichment of non-specific clones. Summary of the invention
- the object of the present invention is to provide two antigenic epitopes of staphylococcus aureus virulence factor regulating protein (TRAPC Target of RNAIII activating protein) and their mimetic epitopes.
- TRAPC Target of RNAIII activating protein staphylococcus aureus virulence factor regulating protein
- Another object of the present invention is to provide the application of the above epitopes or polypeptides corresponding to the amino acid sequences of these epitopes in the preparation of drugs or vaccines against S. aureus infection.
- the TRAP polyclonal antibody as the target and obtained two sets of TRAP protein mimic epitopes through linear peptide library selection.
- the sequences of the two families can be found on the expressed sequence, that is, the two epitopes of the TRAP protein itself: the 21-34 amino acid sequence and the 156-167 amino acid sequence.
- Their amino acid sequence is as follows: Epitope 1: Corresponding to the 21-34 amino acid sequence of the TRAP protein:
- Epitope 2 amino acid sequence corresponding to positions 156-167 of the TRAP protein: 156 SYFERYLYPI E 167
- the two antigen mimic epitopes of the S. aureus virulence factor regulatory protein TRAP of the present invention are polypeptides having the following amino acid sequence structural pattern:
- Antigen Mimic Epitope 1 XPXHHQHXTGFT
- the uppercase English letters respectively represent twenty-one known natural L-type amino acid residues or one of its D-type isomers, that is, A represents an alanine residue R, arginine residue, N for asparagine residue, D for aspartic acid residue, Q for glutamine residue, E for glutamic acid residue, and H for histidine residue , W represents tryptophan residue, Y represents tyrosine residue, F represents phenylalanine residue, T represents threonine residue, S represents serine residue, L represents leucine residue, and G represents Glycine residues, P for proline residues, V for valine residues, K for lysine residues, M for methionine residues, I for isoleucine residues, and X for twenty A known natural L-type amino acid residue or any one of its D-isomers.
- amino acids in the above epitope can be replaced with each other according to the similarity of amino acids, such as glutamine residue (Q), glutamic acid residue (E), aspartic acid residue (D) or asparagine Residues (N) can be replaced with each other; tryptophan residues (W), tyrosine residues (Y) or phenylalanine residues (F) can be replaced with each other; lysine residues ( K) and arginine residue (R) can be replaced with each other; serine residue (S) and threonine residue (T) can be replaced with each other; alanine residue (A) and glycine Acid residues (G) can be replaced with each other; leucine residues (L) and methionine residues (M) can be replaced with each other.
- amino acids such as glutamine residue (Q), glutamic acid residue (E), aspartic acid residue (D) or asparagine Residues (N) can be replaced with each other; tryp
- the small molecule polypeptide of the present invention can be prepared by chemical synthesis or recombinant expression by genetic engineering.
- the main reason for the resistance of traditional antibiotic treatment is that after the treatment, the bacteria produce an inducing enzyme that breaks down the effective groups in the antibiotic under the pressure of survival.
- the TRAP antigen epitope and the polypeptide corresponding to the mimic epitope utilized by the present invention are highly conserved among different S. aureus strains TRAP proteins, and can stimulate the body to produce antibodies against TRAP and inhibit the activity of TRAP, so a vaccine can be prepared Fight against Staphylococcus aureus infection without losing the pathogenicity of the bacteria without killing the bacteria. It is applicable to all drug-resistant and non-resistant strains. This is a common and frequent cause of eradication of drug-resistant Staphylococcus aureus infections that have been plagued clinically. And deadly diseases find new ways. BRIEF DESCRIPTION OF THE DRAWINGS
- Figure 1 shows the electrophoresis diagram of TRAP polyclonal affinity purification.
- FIG. 2 is a binding diagram of a competition rap protein and an antibody detected by a competition ELISA method for detecting a phage clone of an antigenic epitope sequence 1.
- the antigenic epitope and the simulated epitope of the present invention lay a foundation for the research on the vaccine against S. aureus infection, and open a new way for the treatment of S. aureus infection, which has wide application value and broad market prospect. detailed description The present invention will be further described in detail by taking the antigen mimic epitope 1 as an example.
- Example 1 Preparation and purification of TRAP protein monoclonal antibodies
- Polyclonal antibodies were prepared by immunizing rabbits with purified TRAP protein.
- Anti-TRAP IgG was isolated from polyclonal antibody serum using an affinity column coupled with TRAP protein.
- the SDS-PAGE electrophoresis results showed that the purity of the purified IgG was> 90%, and the ELISA results showed that the titer was above 1x10 s (see Figure 1, Figure 1 represents the low molecular weight protein standard, and 2 represents the purified TRAP polyclonal antibody).
- Example 2 Screening of TRAP Polyclonal Antigen Mimic Epitope
- TRAP polyclonal antibody IgG 100 ⁇ l of purified TRAP polyclonal antibody IgG was coated on the enzyme-linked plate and placed in 4 ports overnight. After blocking with 2% gelatin for 1 h, add phage dodecapeptide library, incubate for 1 h at room temperature, wash non-specifically bound phages with TBST (50mmol / L Tris-HCl, 0.1% TWEEN20, pH7.5), and then use 0.2mmol / L L-glycine-HC1 pH2.2 elutes the specifically bound phage, and the eluate is neutralized with 1mmol / L Tris-HCl pH9.0.
- TBST 50mmol / L Tris-HCl, 0.1% TWEEN20, pH7.5
- the titer of phage in the eluate was measured, and the titer of the eluted phage of the uncoated target protein was used as a control to determine the input-output ratio.
- the eluted phage bound to the TRAP antibody IgG was amplified, and its lower titer was measured for the next round of screening. After three rounds of screening, the measured input and output have improved significantly.
- the enriched phage clones were identified by ELISA, and 24 positive clones were randomly selected for sequencing. After analysis, the peptide sequences of the above two families containing the epitope sequence 1 of the antigen were obtained.
- Example 3 Comparison of the screened antigen mimic epitope sequence 1 and the expressed TRAP sequence
- sequence of the epitope sequence 1 of the antigen is similar to the amino acid sequence of positions 21-34 of the TRAP protein:
- TRAP protein primary sequence 21 NP HO HOFOFSASDT 34
- Antigen mimic epitope sequence 1 Phage clone competes for binding of TRAP protein to antibody
- a phage clone was selected which amplifies the mimic epitope sequence 1 of the antigen and tested whether it can compete with the binding of TRAP to the TRAP polyclonal antibody.
- the TRAP antibody was coated, and a mixture of different amounts of the TRAP protein and the phage (10 9 ) was added.
- the phage competed for the binding of the TRAP protein to the antibody by using a monoclonal antibody against M13 to detect the phage.
- the experimental results show that the phage clone of the antigen mimic epitope sequence 1 can compete for the binding of the TRAP protein to its antibody.
- Figure 1 in Figure 1 represents 9 antigen mimic epitope sequence 1 phage clone
- 2 represents 5 ⁇ TRAP + 10 9 antigen mimic epitope sequence 1 phage clone
- 3 represents 10 gTRAP + 10 9 antigen mimic epitope sequence 1 phage clone
- Example 5 Inhibition of TRAP polyclonal antibody activity by phage clones of the antigen mimic epitope sequence 1
- TRAP antigen mimic epitope sequence 1 100 RN6390B was inoculated, and the samples were added to CY medium and co-cultured with S. aureus for 6 hours. The secretion level of S. aureus exotoxin was detected by MDBK cytotoxicity model.
- the experimental results show that the TRAP polyclonal antibody can reduce the level of S. aureus exotoxin, and the phage clone of the antigen mimic epitope sequence 1 can inhibit the function of the antibody, which can reduce the effect of the TRAP polyclonal antibody by about 25%. This indicates that the polypeptide of the antigen mimic epitope sequence 1 can inhibit the action of the antibody by specifically binding the antibody to the TRAP binding site.
- Example 6. TRAP antigen mimic epitope sequence 1 displayed on bacterial flagella and immune motility Effect observation
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Priority Applications (4)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
EP03756419.2A EP1719520B1 (en) | 2003-07-21 | 2003-09-27 | Antigen epitopes of the regulatory protein of virulence factor in staphylococcus aureus and their mimotopes and use |
DK03756419.2T DK1719520T3 (en) | 2003-07-21 | 2003-09-27 | ANTIGENE EPITOPES OF REGULATION PROTEIN OF VIRULENS FACTOR IN STAPHYLOCOCCUS AUREUS AND MIMOTOPES THEREOF AND USE |
AU2003304343A AU2003304343A1 (en) | 2003-07-21 | 2003-09-27 | Antigen epitopes of the regulatory protein of virulence factor in staphylococcus aureus and their mimotopes and use |
ES03756419.2T ES2535777T3 (es) | 2003-07-21 | 2003-09-27 | Epítopos antigénicos de la proteína reguladora del factor de virulencia en Staphylococcus aureus y sus mimótopos y uso |
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CN03150203.2 | 2003-07-21 | ||
CNA031502032A CN1569893A (zh) | 2003-07-21 | 2003-07-21 | 金葡菌毒力因子调控蛋白的抗原表位及其模拟表位和用途 |
Publications (2)
Publication Number | Publication Date |
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WO2005007683A1 true WO2005007683A1 (en) | 2005-01-27 |
WO2005007683A8 WO2005007683A8 (fr) | 2006-06-15 |
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Application Number | Title | Priority Date | Filing Date |
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PCT/CN2003/000827 WO2005007683A1 (en) | 2003-07-21 | 2003-09-27 | Antigen epitopes of the regulatory protein of virulence factor in staphylococcus aureus and their mimotopes and use |
Country Status (6)
Country | Link |
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EP (1) | EP1719520B1 (zh) |
CN (1) | CN1569893A (zh) |
AU (1) | AU2003304343A1 (zh) |
DK (1) | DK1719520T3 (zh) |
ES (1) | ES2535777T3 (zh) |
WO (1) | WO2005007683A1 (zh) |
Cited By (3)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
EP2011508A1 (en) * | 2006-04-17 | 2009-01-07 | Institute of Basic Medical Sciences Academy of Military Medical Sciences | Use of trap protein as active ingredient for manufacturing a medicament for the treatment of staphylococcus aureus infection |
US8889150B2 (en) | 2010-03-17 | 2014-11-18 | SOCPRA—Sciences et Génie, s.e.c. | Bacterial vaccine components from Staphylococcus aureus and uses thereof |
US11324815B2 (en) | 2016-10-21 | 2022-05-10 | Socpra—Sciences et Genie, S.E.C. | Vaccine constructs and uses thereof against Staphylococcus infections |
Families Citing this family (3)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN101066463B (zh) * | 2007-05-24 | 2010-09-15 | 上海大学 | 金黄色葡萄球菌DNA疫苗pcDNA3.1(+)-Minigene及其制备方法 |
CN105254719B (zh) * | 2015-10-21 | 2018-07-13 | 黑龙江八一农垦大学 | 金黄色葡萄球菌trap蛋白的cd4+t细胞表位鉴定及其重组表位疫苗 |
CN110156887B (zh) * | 2018-02-12 | 2023-01-13 | 中国人民解放军军事科学院军事医学研究院 | 人vasn蛋白抗原表位、抗原模拟表位及其用途 |
Citations (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US20020102271A1 (en) * | 1998-09-15 | 2002-08-01 | Naomi Balaban | Target of RNAIII activating protein (TRAP) |
-
2003
- 2003-07-21 CN CNA031502032A patent/CN1569893A/zh active Pending
- 2003-09-27 WO PCT/CN2003/000827 patent/WO2005007683A1/zh active Application Filing
- 2003-09-27 AU AU2003304343A patent/AU2003304343A1/en not_active Abandoned
- 2003-09-27 DK DK03756419.2T patent/DK1719520T3/en active
- 2003-09-27 ES ES03756419.2T patent/ES2535777T3/es not_active Expired - Lifetime
- 2003-09-27 EP EP03756419.2A patent/EP1719520B1/en not_active Expired - Lifetime
Patent Citations (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US20020102271A1 (en) * | 1998-09-15 | 2002-08-01 | Naomi Balaban | Target of RNAIII activating protein (TRAP) |
Non-Patent Citations (3)
Title |
---|
BALABAN N. ET AL: "Regulation of Staphylococcus aureus Pathogenesis via Target of RNAIII-activatingProtein (TRAP).", JOURNAL OF BIOLOGICAL CHEMISTRY, 26 January 2001 (2001-01-26), pages 2658 - 2667, XP002984048 * |
See also references of EP1719520A4 * |
WANG Y.: "Phage Display Technology and its Appplication in research of antigenic epitope", CHINESE JOURNAL OF VETERINARY MEDICINE, vol. 39, no. 4, April 2003 (2003-04-01), pages 34 - 37, XP008100491 * |
Cited By (11)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
EP2011508A1 (en) * | 2006-04-17 | 2009-01-07 | Institute of Basic Medical Sciences Academy of Military Medical Sciences | Use of trap protein as active ingredient for manufacturing a medicament for the treatment of staphylococcus aureus infection |
JP2009533478A (ja) * | 2006-04-17 | 2009-09-17 | 海南通用同盟▲約▼▲業▼有限公司 | 黄色ブドウ球菌感染症の治療用薬剤の製造のための活性成分としてtrapタンパク質自体の使用 |
EP2011508A4 (en) * | 2006-04-17 | 2010-11-03 | Hainan Gt Unipul Pharmaceutica | USE OF TRAP PROTEIN AS AN ACTIVE INGREDIENT FOR THE MANUFACTURE OF A MEDICINAL PRODUCT FOR THE TREATMENT OF STAPHYLOCOCCAL INFECTION |
KR101443233B1 (ko) * | 2006-04-17 | 2014-09-22 | 인스티튜트 오브 베이직 메디컬 사이언시즈, 아카데미오브 밀리터리 메디컬 사이언시즈 | 황색포도상구균 감염 치료용 의약을 제조하기 위한 활성 성분으로서의 trap 자체의 용도 |
US8889150B2 (en) | 2010-03-17 | 2014-11-18 | SOCPRA—Sciences et Génie, s.e.c. | Bacterial vaccine components from Staphylococcus aureus and uses thereof |
US9566322B2 (en) | 2010-03-17 | 2017-02-14 | SOCPRA—Sciences et Génie, s.e.c. | Bacterial vaccine components and uses thereof |
US10029004B2 (en) | 2010-03-17 | 2018-07-24 | SOCPRA—Sciences et Génie, s.e.c. | Bacterial vaccine components and uses thereof |
US10576139B2 (en) | 2010-03-17 | 2020-03-03 | SOCPRA—Sciences et Génie, s.e.c. | Bacterial vaccine components and uses thereof |
US11065322B2 (en) | 2010-03-17 | 2021-07-20 | Socpra—Sciences et Genie, S.E.C. | Bacterial vaccine components and uses thereof |
US11129884B2 (en) | 2010-03-17 | 2021-09-28 | Socpra—Sciences et Genie, S.E.C. | Bacterial vaccine components and uses thereof |
US11324815B2 (en) | 2016-10-21 | 2022-05-10 | Socpra—Sciences et Genie, S.E.C. | Vaccine constructs and uses thereof against Staphylococcus infections |
Also Published As
Publication number | Publication date |
---|---|
EP1719520A4 (en) | 2009-06-24 |
ES2535777T3 (es) | 2015-05-14 |
EP1719520B1 (en) | 2015-04-15 |
AU2003304343A8 (en) | 2005-02-04 |
AU2003304343A1 (en) | 2005-02-04 |
DK1719520T3 (en) | 2015-05-11 |
EP1719520A1 (en) | 2006-11-08 |
CN1569893A (zh) | 2005-01-26 |
WO2005007683A8 (fr) | 2006-06-15 |
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