WO2002012311A1 - A novel polypeptide - human fasciculation and elongation protein 16.61 and a polynucleotide encoding the same - Google Patents

A novel polypeptide - human fasciculation and elongation protein 16.61 and a polynucleotide encoding the same Download PDF

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Publication number
WO2002012311A1
WO2002012311A1 PCT/CN2001/001022 CN0101022W WO0212311A1 WO 2002012311 A1 WO2002012311 A1 WO 2002012311A1 CN 0101022 W CN0101022 W CN 0101022W WO 0212311 A1 WO0212311 A1 WO 0212311A1
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polypeptide
polynucleotide
human
protein
bundling
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PCT/CN2001/001022
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French (fr)
Chinese (zh)
Inventor
Yumin Mao
Yi Xie
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Biowindow Gene Development Inc. Shanghai
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Priority to AU93648/01A priority Critical patent/AU9364801A/en
Publication of WO2002012311A1 publication Critical patent/WO2002012311A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/46Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates
    • C07K14/47Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates from mammals
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides

Definitions

  • the present invention belongs to the field of biotechnology. Specifically, the present invention describes a novel polypeptide, a human bundle and elongation protein 16.61, and a polynucleotide sequence encoding the polypeptide. The invention also relates to a preparation method and application of the polynucleotide and polypeptide. Background technique
  • axons In the meridian system, axons often have to pass through different extracellular environments to reach their destination. Most axons grow along other axons, and the concentration of different axons in the nerve bundle is likely to play an important role in the tissues of the nervous system. Analysis of mutants of nematode dyskinesia revealed a set of genes that, when mutated, affect the growth of axons in the nerve fiber bundles, but axons in the matrix without surrounding nerve fibers are not affected.
  • unc-76 mutations in this group of proteins (unc-34, unc-71, unc76) can cause two types of defects: many axons in the dorsal / abdominal nerve fiber bundles cannot stretch to their normal length; in addition, Many axons also fail to stay in the nerve fiber bundles that should normally be present.
  • the two possible functions of unc-76 are: First, the unc-76 protein may play an important role in the formation and / or maintenance of nerve fiber bundles through interaction with cell surface adhesion proteins, axon membranes, and cytoskeleton; Second, the unc-76 protein may transmit signals from the cell surface to the inside of the cell to regulate the axon extension and adhesion. [Proc. Natl. Acad. Sci. USA Vol. 94, pp. 3414-3419, April 1997]
  • the human unc-76 human FEZ1 protein is called (bundling and elongating protein ⁇ -1). It consists of 393 amino acid residues. It has a high content of arginine / glutamic acid, its N-terminus is highly acidified, and some sites contain amphoteric helixes. FEZ1 has no signal sequence and no transmembrane region. This property implies that it exists inside the cell. FEZ1 is highly expressed in both adult mouse brain and mouse embryo. FEZ1 can interact with the N-terminal variable region of the PKCZ zeta subunit, and can also interact weakly with P ⁇ . This shows that FEZ1 is one of the substrates of PKC.
  • FEZ1 plays a key role in axon guidance in mammals through PKC zeta interactions.
  • Gene chip analysis revealed that in the bladder mucosa, PMA + Ecv304 cell line, LPS + Ecv304 cell line thymus, normal fibroblasts 1024NC, Fibroblast , Growth factor stimulation, 1024NT, scar into fc growth factor stimulation, 1013HT, scar into fc without growth factor stimulation, 1013HC, bladder cancer cell EJ, bladder cancer, bladder cancer, liver cancer, liver cancer cell line, fetal skin, In spleen, prostate cancer, jejunum adenocarcinoma, and cardia cancer, the expression profile of the polypeptide of the present invention and the expression profile of human FEZ1 protein They are very similar, so their functions may be similar.
  • the present invention ⁇ Human bundling and elongation protein
  • the human bundling and elongation protein 16.61 protein plays an important role in regulating important functions of the body such as cell division and embryonic development, and it is believed that a large number of proteins are involved in these regulatory processes, so more needs to be identified in the art
  • the human bunching and elongating protein 16.61 protein involved in these processes, especially the amino acid sequence of this protein is identified.
  • Newcomer bundling and elongation protein 16.61 The isolation of protein-coding genes also provides the basis for research to determine the role of this protein in health and disease states. This protein may form the basis for the development of diagnostic and / or therapeutic drugs for diseases, so it is important to isolate its coding DM. Disclosure of invention
  • Another object of the invention is to provide a polynucleotide encoding the polypeptide.
  • Another object of the present invention is to provide a genetically engineered host cell containing a polynucleotide encoding human bunching and elongation proteins 16.61.
  • Another object of the present invention is to provide a method for producing human bundling and elongating protein 16.61.
  • Another object of the present invention is to provide antibodies against the human polypeptide bundling and elongating protein 16.61 of the polypeptide of the present invention.
  • Another object of the present invention is to provide mimic compounds, antagonists, agonists, and inhibitors of one-to-one bundling and elongation proteins 16.61 of the polypeptide of the present invention.
  • Another object of the present invention is to provide a method for diagnosing and treating diseases associated with abnormalities in human bundling and elongin 16.61.
  • the present invention relates to an isolated polypeptide, which is of human origin and comprises: a polypeptide having the amino acid sequence of SEQ ID No. 2, or a conservative variant, biologically active fragment or derivative thereof.
  • the polypeptide is a polypeptide having the amino acid sequence of SEQ ID NO: 2.
  • the invention also relates to an isolated polynucleotide comprising a nucleotide sequence or a variant thereof selected from the group consisting of:
  • polynucleotide complementary to polynucleotide (a);
  • sequence of the polynucleotide is one selected from the group consisting of: (a) a sequence having positions 701-1156 in SEQ ID NO: 1; and (b) a sequence having 1-1721 in SEQ ID NO: 1 Sequence of bits.
  • the present invention further relates to a vector, particularly an expression vector, containing the polynucleotide of the present invention; a host cell genetically engineered with the vector, including a transformed, transduced or transfected host cell; Host cell and method of preparing the polypeptide of the present invention by recovering the expression product.
  • the invention also relates to an antibody capable of specifically binding to a polypeptide of the invention.
  • the invention also relates to a method for screening compounds that mimic, activate, antagonize or inhibit human bundling and elongation protein 16.61 protein activity, which comprises utilizing a polypeptide of the invention.
  • the invention also relates to compounds obtained by this method.
  • the invention also relates to a method for in vitro detection of a disease or susceptibility to disease associated with abnormal expression of human bunching and elongation 16.61 protein, comprising detecting mutations in the polypeptide or a sequence encoding a polynucleotide thereof in a biological sample, Alternatively, the amount or biological activity of a polypeptide of the invention in a biological sample is detected.
  • the invention also relates to a pharmaceutical composition
  • a pharmaceutical composition comprising a polypeptide of the invention or a mimetic thereof, an activator, an antagonist or an inhibitor, and a pharmaceutically acceptable carrier.
  • the invention also relates to the use of the polypeptides and / or polynucleotides of the invention for the manufacture of a medicament for the treatment of cancer, developmental or immune diseases or other diseases caused by abnormal expression of human bundling and elongation protein 16.61.
  • Nucleic acid sequence refers to an oligonucleotide, a nucleotide or a polynucleotide and a fragment or part thereof, and may also refer to a genomic or synthetic DNA or RNA, they can be single-stranded or double-stranded, representing the sense or antisense strand.
  • amino acid sequence refers to an oligopeptide, peptide, polypeptide or protein sequence and fragments or portions thereof.
  • amino acid sequence in the present invention relates to the amino acid sequence of a naturally occurring protein molecule, such "polypeptide” or “protein” does not mean to limit the amino acid sequence to a complete natural amino acid related to the protein molecule .
  • a protein or polynucleotide “variant” refers to an amino acid sequence having one or more amino acids or nucleotide changes, or a polynucleotide sequence encoding it.
  • the changes may include deletions, insertions or substitutions of amino acids or nucleotides in the amino acid sequence or nucleotide sequence.
  • Variants may have "conservative" changes in which the substituted amino acid has a structural or chemical property similar to the original amino acid, such as replacing isoleucine with leucine.
  • Variants can also have non-conservative changes, such as replacing glycine with tryptophan.
  • “Deletion” refers to the deletion of one or more amino acids or nucleotides in an amino acid sequence or nucleotide sequence.
  • Insertion refers to an alteration in the amino acid sequence or nucleotide sequence that results in an increase in one or more amino acids or nucleotides compared to a naturally occurring molecule.
  • Replacement refers to the replacement of one or more amino acids or nucleotides with different amino acids or nucleotides.
  • Bioactivity refers to a protein that has the structure, regulation, or biochemical function of a natural molecule.
  • immunologically active refers to the ability of natural, recombinant or synthetic proteins and fragments thereof to induce a specific immune response in appropriate animals or cells and to bind to specific antibodies.
  • An "agonist” refers to a molecule that, when combined with human bundling and elongating protein 16.61, can cause the protein to change, thereby regulating the activity of the protein.
  • An agonist may include a protein, a nucleic acid, a carbohydrate, or any other molecule that binds human bundling and elongating proteins 16.61.
  • Antagonist refers to a molecule that, when combined with human bundling and elongin 16.61, can block or regulate the biological or immunological activity of human bundling and elongin 16.61.
  • Antagonists and inhibitors may include proteins, nucleic acids, carbohydrates, or any other molecule that binds human bunching and elongating proteins 16.61.
  • Regular refers to changes in the function of human bundling and elongin 16.61, including an increase or decrease in protein activity, changes in binding characteristics, and any other biological properties and functions of human bundling and elongation 16.61 Or changes in immune properties.
  • Substantially pure ' means essentially free of other proteins, lipids, sugars or other substances with which it is naturally associated.
  • Those skilled in the art can use standard protein purification techniques to purify human bundling and elongating proteins 16.61 Basically pure human bundles and elongins 16.61 can produce a single main band on a non-reducing polyacrylamide gel. Human bundles and elongins 16.61 The purity of the polypeptide can be analyzed by amino acid sequence.
  • Complementary refers to the natural binding of polynucleotides by base-pairing under conditions of acceptable salt concentration and temperature.
  • sequence C-T-G-A
  • complementary sequence G-A-C-T.
  • the complementarity between two single-stranded molecules may be partial or complete.
  • the degree of complementarity between nucleic acid strands has a significant effect on the efficiency and strength of hybridization between nucleic acid strands.
  • “Homology” refers to the degree of complementarity and can be partially homologous or completely homologous.
  • Partial homology refers to a partially complementary sequence that at least partially inhibits hybridization of a fully complementary sequence to a target nucleic acid. The inhibition of such hybridization can be detected by performing hybridization (Southern blotting or Nor thern blotting, etc.) under conditions of reduced stringency.
  • Substantially homologous sequences or hybridization probes can compete and inhibit the binding of completely homologous sequences to the target sequence under conditions of reduced stringency. This does not mean that conditions with reduced stringency allow non-specific binding, because conditions with reduced stringency require two sequences Columns are bound to each other as specific or selective interactions.
  • Percent identity refers to the percentage of sequences that are identical or similar in the comparison of two or more amino acid or nucleic acid sequences. The percent identity can be determined electronically, such as by the MEGALIGN program (Lasergene sof tware package, DNASTAR, Inc., Madi son Wis.). The MEGALIGN program can compare two or more sequences according to different methods such as the Clus ter method (Hi gg ins, DG and PM Sharp (1988) Gene 73: 237-244). 0 The Clus ter method will check the distance between all pairs by Groups of sequences are arranged in clusters. The clusters are then assigned in pairs or groups.
  • the percent identity between two amino acid sequences such as sequence A and sequence B is calculated by the following formula: The number of matching residues between sequence A and sequence X 100 The number of residues in sequence A-the number of spacer residues in sequence A The number of spacer residues in a sequence B can also be determined by the Cluster method or by methods known in the art such as; Fotun Hein to determine the percent identity between nucleic acid sequences (Hein J., (1990) Methods in emzumo logy 183: 625 -645) "” Similarity "refers to the degree of identical or conservative substitutions of amino acid residues at corresponding positions when the alignment between amino acid sequences is aligned.
  • negatively charged amino acids may include aspartic acid Acids and glutamic acid; Positively charged amino acids can include lysine and arginine; Amino acids with similarly hydrophilic head groups that have no charge can include leucine, isoleucine, and valine Acids; glycine and alanine; asparagine and glutamine; serine and threonine; phenylalanine and tyrosine.
  • Antisense refers to a nucleotide sequence that is complementary to a particular DNA or RM sequence.
  • Antisense strand refers to a nucleic acid strand that is complementary to a “sense strand.”
  • Derivative refers to a chemical modification of HFP or a nucleic acid encoding it. This chemical modification may be a substitution of a hydrogen atom with a fluorenyl, acyl or amino group. Nucleic acid derivatives can encode polypeptides that retain the main biological properties of natural molecules.
  • Antibody refers to a complete antibody molecule and its fragments, such as Fa,? ( ⁇ ') 2 and? ⁇ It can specifically bind to human bunching and elongation of 16.61 epitopes.
  • a “humanized antibody” refers to an antibody in which the amino acid sequence of a non-antigen binding region is replaced to become more similar to a human antibody, but still retains the original binding activity.
  • isolated refers to the removal of a substance from its original environment (for example, its natural environment if it occurs naturally).
  • a naturally occurring polynucleotide or polypeptide is not isolated when it is present in a living animal, but the same polynucleotide or polypeptide is in the same or all of the natural systems. Separation of matter that coexists with it is separation.
  • Such a polynucleotide may be part of a certain vector, or such a polynucleotide or polypeptide may be part of a certain composition. Since the carrier or composition is not a component of its natural environment, they are still isolated.
  • isolated refers to the separation of a substance from its original environment (if it is a natural substance, the original environment is the natural environment).
  • polynucleotides and polypeptides in a natural state in a living cell are not isolated and purified, but the same polynucleotides or polypeptides are separated and purified if they are separated from other substances in the natural state .
  • isolated human bundling and elongating protein 16.61 refers to human bundling and elongating protein 16.61 that is substantially free of other proteins, lipids, carbohydrates, or other substances with which it is naturally associated. Those skilled in the art can purify human bundling and elongation proteins using standard protein purification techniques 16.61. Substantially pure peptides can produce a single main band on a non-reducing polyacrylamide gel. Human bundling and elongation protein 16.61 The purity of the polypeptide can be analyzed by amino acid sequence.
  • the present invention provides a novel polypeptide one-to-one bundling and elongation protein 16.61, which basically consists of the amino acid sequence shown in SEQ ID NO: 2.
  • the polypeptide of the present invention may be a recombinant polypeptide, a natural polypeptide, or a synthetic polypeptide, and preferably a recombinant polypeptide.
  • the polypeptides of the present invention can be naturally purified products or chemically synthesized products, or can be produced from prokaryotic or eukaryotic hosts (eg, bacteria, yeast, higher plants, insects, and mammalian cells) using recombinant techniques. Depending on the host used in the recombinant production protocol, the polypeptide of the invention may be glycosylated, or it may be non-glycosylated. Polypeptides of the invention may also include or exclude initial methionine residues.
  • the invention also includes fragments, derivatives and analogs of human bundling and elongating protein 16.61.
  • fragment refers to a polypeptide that substantially retains the same biological function or activity of the human bundled and extended proteins 16.61 of the present invention.
  • a fragment, derivative or analog of the polypeptide of the present invention may be: (I) a kind in which one or more amino acid residues are substituted with conservative or non-conservative amino acid residues (preferably conservative amino acid residues), and the substitution
  • the amino acid may or may not be encoded by the genetic code; or (II) such a type in which a group on one or more amino acid residues is substituted by other groups to include a substituent; or (III) such A type in which a mature polypeptide is fused to another compound (such as a compound that extends the half-life of a polypeptide, such as polyethylene glycol); or (IV) a type of polypeptide sequence in which an additional amino acid sequence is fused into a mature polypeptide (such as the leader sequence or secreted sequence or the sequence used to purify this polypeptide or protease sequence)
  • such fragments, derivatives and analogs are considered to be within the knowledge of those skilled in the art.
  • the present invention provides an isolated nucleic acid (polynucleotide), which basically consists of an amino acid encoding SEQ ID NO: 2 Polynucleotide composition of a polypeptide of the amino acid sequence.
  • the polynucleotide sequence of the present invention includes the nucleotide sequence of SEQ ID NO: 1.
  • the polynucleotide of the present invention is found from a cDNA library of human fetal brain tissue. It contains a polynucleotide sequence with a total length of 1721 bases, and its open reading frame 701-1 156 encodes 151 amino acids. According to the comparison of gene chip expression profiles, it was found that this polypeptide has a similar expression profile with human FEZ1 protein, and it can be inferred that the human bundle and elongation protein 16.61 have similar functions to human FEZ1 protein.
  • the polynucleotide of the present invention may be in the form of DM or RNA.
  • DM forms include cDNA, genomic DNA, or synthetic DNA.
  • MA can be single-stranded or double-stranded.
  • DM can be a coding chain or a non-coding chain.
  • the coding region sequence encoding a mature polypeptide may be the same as the coding region sequence shown in SEQ ID NO: 1 or a degenerate variant.
  • a "degenerate variant" refers to a nucleic acid sequence encoding a protein or polypeptide having SEQ ID NO: 2 but having a sequence different from the coding region sequence shown in SEQ ID NO: 1 in the present invention.
  • the polynucleotide encoding the mature polypeptide of SEQ ID NO: 2 includes: only the coding sequence of the mature polypeptide; the coding sequence of the mature polypeptide and various additional coding sequences; the coding sequence of the mature polypeptide (and optional additional coding sequences); Coding sequence.
  • polynucleotide encoding a polypeptide refers to a polynucleotide comprising the polypeptide and a polynucleotide comprising additional coding and / or non-coding sequences.
  • the invention also relates to variants of the polynucleotides described above, which encode polypeptides or fragments, analogs and derivatives of polypeptides having the same amino acid sequence as the invention.
  • Variants of this polynucleotide can be naturally occurring allelic variants or non-naturally occurring variants. These nucleotide variants include substitution variants, deletion variants, and insertion variants.
  • an allelic variant is an alternative form of a polynucleotide that may be a substitution, deletion, or insertion of one or more nucleotides, but does not substantially change the function of the polypeptide it encodes .
  • the invention also relates to a polynucleotide that hybridizes to the sequence described above (having at least 50%, preferably 70% identity, between the two sequences).
  • the present invention particularly relates to polynucleotides that can hybridize to the polynucleotides of the present invention under stringent conditions.
  • “strict conditions” means: (1) hybridization and elution at lower ionic strength and higher temperature, such as 0.2xSSC, 0.1% SDS, 60 ° C; or (2) Add a denaturant during hybridization, such as 50% (v / v) formamide, 0.1% calf serum / 0.1 li co ll, 42 ° C, etc .; or (3) the same only between the two sequences Crosses occur only when the sex is at least 95%, and more preferably 97%.
  • the polypeptide encoded by the hybridizable polynucleotide has the same biological function and activity as the mature polypeptide shown in SEQ ID NO: 2.
  • nucleic acid fragments that hybridize to the sequences described above.
  • a "nucleic acid fragment” contains at least 10 nucleotides in length, preferably at least 20-30 nucleotides, more preferably at least 50-60 nucleotides, preferably at least 100 nucleotides.
  • Nucleic acid fragments can also be used in nucleic acid amplification techniques, such as PCR, to identify and / or isolate polynucleotides encoding human bundling and elongation protein 16.61.
  • polypeptides and polynucleotides in the present invention are preferably provided in an isolated form and are more preferably purified to homogeneity.
  • the specific polynucleotide sequence of the present invention encoding human bundling and elongating protein 16.61 can be obtained by a variety of methods.
  • polynucleotides are isolated using hybridization techniques well known in the art. These techniques include, but are not limited to: 1) hybridization of probes to genomic or cDNA libraries to detect homologous polynucleotide sequences, and 2) antibody screening of expression libraries to detect cloned polynucleosides with common structural characteristics Acid fragments.
  • the DNA fragment sequence of the present invention can also be obtained by the following methods: 1) separating the double-stranded DNA sequence from the DM of the genome; 2) chemically synthesizing the DNA sequence to obtain the double-stranded DNA of the polypeptide.
  • genomic DNA isolation is the least commonly used. Direct chemical synthesis of DM sequences is often the method of choice. The more commonly used method is the isolation of cDNA sequences.
  • the standard method for isolating the cDM of interest is to isolate mRNA from donor cells that overexpress the gene and perform reverse transcription to form a plasmid or phage cDNA library.
  • mRM plasmid or phage cDNA library.
  • kits are also commercially available (Qiagene).
  • the construction of cDNA libraries is also a common method (Sarabrook, et al., Molecular Cloning, A Laboratory Manual, Cold Spring Harbor Laboratory. New York, 1989).
  • Commercially available cDNA libraries are also available, such as different cDNA libraries from Clontech. When polymerase reaction technology is used in combination, even very small expression products can be cloned.
  • genes of the present invention can be selected from these cDNA libraries by conventional methods. These methods include (but are not limited to): (l) DNA-DNA or DNA-RNA hybridization; (2) the presence or absence of marker gene functions; (3) determination of human bundled and elongated protein 16.61 transcript levels; ( 4) Detecting gene-expressed protein products by immunological techniques or by measuring biological activity. The above methods can be used singly or in combination.
  • the probe used for hybridization is homologous to any part of the polynucleotide of the present invention, and its length is at least 10 nucleotides, preferably at least 30 nucleotides, more preferably At least 50 nucleotides, preferably at least 100 nucleotides.
  • the length of the probe is usually within 2000 nucleotides, preferably within 1000 nucleotides.
  • the probe used here is generally a DNA sequence chemically synthesized based on the gene sequence information of the present invention.
  • the genes or fragments of the present invention can of course be used as probes.
  • DNA probes can be labeled with radioisotopes, luciferin, or enzymes (such as alkaline phosphatase).
  • the protein product of 16.61 gene expression in human bundled and extended protein 'white can be detected by immunological techniques such as Western blotting, radioimmunoprecipitation, and enzyme-linked immunosorbent assay (ELISA).
  • immunological techniques such as Western blotting, radioimmunoprecipitation, and enzyme-linked immunosorbent assay (ELISA).
  • the RACE method RACE-rapid amplification of cDNA ends
  • the primers can be appropriately selected based on the polynucleotide sequence information of the present invention disclosed herein, and can be synthesized by conventional methods.
  • the amplified DM / RNA fragment can be isolated and purified by conventional methods such as by gel electrophoresis.
  • polynucleotide sequence of the gene of the present invention or various DM fragments and the like obtained as described above can be determined by a conventional method such as dideoxy chain termination (Sanger et al. PNAS, 1977, 74: 5463-5467). Such polynucleotide sequences can also be determined using commercial sequencing kits and the like. In order to obtain the full-length cDNA sequence, the sequencing must be repeated. Sometimes it is necessary to determine the cDNA sequence of multiple clones in order to splice into a full-length cDNA sequence.
  • the present invention also relates to a vector comprising the polynucleotide of the present invention, and a host cell genetically engineered using the vector of the present invention or directly using human bunching and elongation 16.61 coding sequence, and the recombinant technology to produce the present invention Polypeptide method.
  • a polynucleotide sequence encoding human bundling and elongating protein 16.61 can be inserted into a vector to constitute a recombinant vector containing the polynucleotide of the present invention.
  • vector refers to bacterial plasmids, phages, yeast plasmids, plant cell viruses, mammalian cell viruses such as adenoviruses, retroviruses or other vectors well known in the art.
  • Vectors suitable for use in the present invention include, but are not limited to: T7 promoter-based expression vectors (Rosenberg, et al.
  • any plasmid and vector can be used to construct a recombinant expression vector.
  • An important feature of expression vectors is that they usually contain an origin of replication, a promoter, a marker gene, and translational regulatory elements.
  • Methods well known to those skilled in the art can be used to construct expression vectors containing a DNA sequence encoding human bunching and elongation protein 16.61 and suitable transcription / translation regulatory elements. These methods include in vitro recombinant DNA technology, DNA synthesis technology, and in vivo recombination technology (Sarabroook, et al. Mo l ecu lar Cloning, a Labora tory Manua l, co ld Spr ing Harbor Labora tory. New York, 1989) .
  • the DNA sequence can be operably linked to an appropriate promoter in an expression vector to guide mRNA synthesis. Representative examples of these promoters are: the l ac or trp promoter of E.
  • the expression vector also includes a ribosome binding site and a transcription terminator for translation initiation. Insertion of enhancer sequences into the vector will enhance its transcription in higher eukaryotic cells. Enhancers are cis-acting factors expressed by DM, usually about 10 to 300 base pairs, which act on promoters to enhance gene transcription. Illustrative examples include late initiation of replication SV40 enhancer with 100 to 270 base pairs on one side, polyoma enhancer and adenovirus enhancer on the late side of the origin of replication, and the like.
  • the expression vector preferably contains one or more selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as dihydrofolate reductase, neomycin resistance, and green for eukaryotic cell culture.
  • selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as dihydrofolate reductase, neomycin resistance, and green for eukaryotic cell culture.
  • GFP fluorescent protein
  • tetracycline or ampicillin resistance for E. coli.
  • a polynucleotide encoding human bundling and elongating protein 16.61 or a recombinant vector containing the polynucleotide can be transformed or transduced into a host cell to form a genetically engineered host containing the polynucleotide or the recombinant vector.
  • the term "host cell” refers to a prokaryotic cell, such as a bacterial cell; or a lower eukaryotic cell, such as a yeast cell; or a higher eukaryotic cell, such as a mammalian cell. Representative examples are: E.
  • coli Streptomyces
  • bacterial cells such as Salmonella typhimurium
  • fungal cells such as yeast
  • plant cells such as fly S2 or Sf 9
  • animal cells such as CH0, COS or Bowes melanoma cells.
  • Transformation of a host cell with a DM sequence according to the present invention or a recombinant vector containing the DNA sequence can be performed by conventional techniques well known to those skilled in the art.
  • the host is a prokaryote such as E. coli
  • competent cells capable of absorbing DNA can be harvested after the exponential growth phase and treated with CaCl, the steps used are well known in the art. Alternatively, MgCl 2 is used. If necessary, transformation can also be performed by electroporation.
  • the host is a eukaryotic organism, the following DNA transfection methods can be used: calcium phosphate co-precipitation method, or conventional mechanical methods such as microinjection, electroporation, and liposome packaging.
  • the polynucleotide sequence of the present invention can be used to express or produce recombinant human bundling and elongating protein 16.61 (Scence, 1984; 224: 1431). Generally there are the following steps:
  • the medium used in the culture may be selected from various conventional mediums. Culture is performed under conditions suitable for host cell growth. After the host cells have grown to an appropriate cell density, the selected promoter is induced by a suitable method (such as temperature conversion or chemical induction), and the cells are cultured for a period of time.
  • a suitable method such as temperature conversion or chemical induction
  • the recombinant polypeptide may be coated in a cell, expressed on a cell membrane, or secreted outside the cell. If necessary, it can be separated by various separation methods using its physical, chemical and other properties. Isolate and purify the recombinant protein. These methods are well known to those skilled in the art. These methods include, but are not limited to: conventional renaturation treatment, protein precipitant treatment (salting out method), centrifugation, osmotic disruption, ultrasonic treatment, ultracentrifugation, molecular sieve chromatography (gel filtration), adsorption chromatography, ion Exchange chromatography, high performance liquid chromatography (HPLC) and various other liquid chromatography techniques and combinations of these methods.
  • conventional renaturation treatment protein precipitant treatment (salting out method), centrifugation, osmotic disruption, ultrasonic treatment, ultracentrifugation, molecular sieve chromatography (gel filtration), adsorption chromatography, ion Exchange chromatography
  • FIG. 1 is a comparison diagram of gene chip expression profiles of the inventor bundled and extended protein 16.61 and human FEZ1 protein.
  • the upper graph is a graph of the expression profile of human bundling and elongation protein 16.61, and the lower graph is the graph of the expression profile of human FEZ1 protein.
  • Figure 2 shows the polyacrylamide gel electrophoresis (SDS-PAGE) of the isolated human bundling and elongating protein 16.61.
  • 17kDa is the molecular weight of the protein.
  • the arrow indicates the isolated protein band.
  • Total human fetal brain RNA was extracted by one-step method with guanidine isothiocyanate / phenol / chloroform.
  • Poly (A) mRNA was isolated from total RNA using Quik mRNA Isolat ion Kit (product of Qiegene). 2ug poly (A) mRNA is reverse transcribed to form cDNA.
  • the Smar t cDNA cloning kit purchased from Clontech) was used to insert the cDNA fragments into the multiple cloning site of the pBSK (+) vector (Clontech) to transform DH5 ⁇ .
  • Dye terminate cycle react ion sequencing kit Perkin-Elmer
  • ABI 377 automatic sequencer Perkin-Elmer
  • the determined cDNA sequence was compared with the public DNA sequence database (Genebank), and one of the clones was found.
  • the 0311g07 cDNA sequence is new DNA.
  • a series of primers were synthesized to determine the inserted cDNA fragments of the clone in both directions.
  • the 0311 g07 clone contained a full-length cDNA of 1721bp (as shown in Seq ID N0: l), and a 455bp open reading frame (0RF) from 701bp to 1156bp, encoding a new protein (such as Seq ID NO: 2).
  • This clone pBS-0311g07 and the encoded protein was named human bundling and elongation protein 16.61.
  • Example 2 Cloning of a gene encoding human bundling and elongation protein 16.61 by RT-PCR
  • CDNA was synthesized using fetal brain cell total RNA as a template and ol igo-dT as a primer for reverse transcription reaction.
  • PCR amplification was performed with the following primers:
  • Pr imer 1 5,-CCCAACAATGTAACTGCTTGATAT — 3, (SEQ ID NO: 3)
  • Pr imer2 5'- GGAAACAGGAGGATTTATTTAGAT -3 '(SEQ ID NO: 4)
  • Pr imerl is a forward sequence starting at the lbp at the 5 'end of SEQ ID NO: 1;
  • Pr imer2 is the 3, terminal reverse sequence of SEQ ID NO: 1. .
  • Amplification reaction conditions 50 mmol / L KC 1, 10 mmol / L Tris-CI, (pH 8.5.5), 1.5 ramol / L MgCl 2 , 200 ⁇ rao l / L in a reaction volume of 50 ⁇ 1 dNTP, l Opmol primer, 1U Taq DNA polymerase (Clontech).
  • the reaction was performed on a PE9600 DM thermal cycler (Perkin-Elmer) for 25 cycles under the following conditions: 94 ° C 30sec; 55 ° C 30sec; 72. C 2min.
  • RT-PCR set ⁇ -act in as a positive control and template blank as a negative control.
  • the amplified product was purified using a QIAGEN kit and ligated to a pCR vector (Invitrogen) using a TA cloning kit. DNA sequence analysis results showed that the DNA sequence of the PCR product was exactly the same as the 1-1721bp shown in SEQ ID NO: 1.
  • Example 3 Nor thern blot analysis of human bundling and elongation 16.61 gene expression:
  • This method involves acid guanidinium thiocyanate phenol-chloroform extraction. That is, the tissue is homogenized with 4M guanidine isothiocyanate-25raM sodium citrate, 0.2M sodium acetate (pH4.0), and 1 volume of phenol and 1/5 volume of chloroform-isoamyl alcohol (49: 1), centrifuge after mixing. Aspirate the aqueous layer, add isopropanol (0.8 vol) and centrifuge the mixture to obtain RNA precipitate. The resulting RNA pellet was washed with 70% ethanol, dried and dissolved in water.
  • RNA With 20 g of RNA, electrophoresis was performed on a 1.2% agarose gel containing 20 mM 3- (N-morpholino) propanesulfonic acid (H7. 0)-5 mM sodium acetate-ImM EDTA-2. 2M formaldehyde. It was then transferred to a nitrocellulose membrane.
  • 32 P dATP Preparation 32 P- DNA probe labeled by the random primer Method - with cc. The DNA probe used was the PCR amplified human bundling and elongating protein 16.61 coding region sequence (701bp to 1156bp) shown in FIG.
  • a 32P-labeled probe (about 2 x 10 6 cpm / ml) was hybridized with a nitrocellulose membrane to which RNA was transferred at 42 ° C overnight in a solution containing 50% formamide-25mM KH 2 P0 4 (pH7. 4) -5 x SSC- 5 x Denhardt's solution and 200 g / ml salmon sperm DNA. After hybridization, place the filter at 1 x SSC-0.1 ° /. Wash in SDS at 55 ° C for 30 min. Then, Phosphor Imager was used for analysis and quantification.
  • Example 4 In vitro expression, isolation and purification of recombinant human bundling and elongation protein 16.61
  • Pr imer3 5'-CCCCATATGATGCTGAATTCGTCCTCAGGAAAC-3 '(Seq ID No: 5)
  • Pr iraer4 5' -CATGGATCCTCATTGTAACCTCTGCCTCCCAGG-3 '(Seq ID No: 6)
  • the 5' ends of these two primers contain Ndel and BamHI digestion sites, respectively Points, followed by the coding sequences of the 5 'and 3' ends of the gene of interest, respectively.
  • the Ndel and BamHI restriction sites correspond to the expression vector plasmid pET-28b (+) (Novagen, Cat. No. 69865. 3) Selective endonuclease site.
  • PCR was performed using the pBS-0311g07 plasmid containing the full-length target gene as a template.
  • the PCR reaction conditions were as follows: a total volume of 50 ⁇ 1 containing pBS- 0311g07 plasmid 10 pg, primers Pr imer 3 and Pr imer- 4 points, and J was 1 Opmol, Advantage polymerase Mix (Clontech) 1 ⁇ 1. Cycle parameters: 94 ° C 20s, 60 ° C 30s, 68. C 2 min, a total of 25 cycles. Ndel and BamHI were used to double digest the amplified product and plasmid pET-28 (+), respectively, and large fragments were recovered and ligated with T4 ligase.
  • the ligation product was transformed into coliform bacteria DH5a by the calcium chloride method, and cultured overnight in LB plates containing kanamycin (final concentration 30 g / ral).
  • the positive clones were screened by colony PCR method and sequenced.
  • a positive clone (pET-0311g07) with the correct sequence was selected, and the recombinant plasmid was transformed into E. coli BL21 (DE3) plySs (product of Novagen) using the calcium chloride method.
  • the host bacteria BL21 (pBT-0311g07) was cultured at 37 ° C to the logarithmic growth phase, and IPTG was added to a final concentration of 1 ol / L. Continue to cultivate for 5 hours. The cells were collected by centrifugation, and the supernatant was collected by centrifugation. The supernatant was collected by centrifugation. Chromatography was performed using an affinity chromatography column His s. Bind Quick Cartridge (product of Novagen) capable of binding to 6 histidines "His-Tag". The purified human protein bundle and elongation protein 16.61 were obtained.
  • a peptide synthesizer (product of PE company) was used to synthesize the following 16.61-specific peptides: NH2-Met-Leu-Asn-Ser-Ser-Ser-Gly-Asn-Leu-Leu-Lys- I le-Gln-I le-Ser- C00H (SEQ ID NO: 7).
  • the polypeptide is coupled to hemocyanin and bovine serum albumin to form a complex, respectively.
  • hemocyanin and bovine serum albumin for the method, see: Avrameas, et al. Immunochemi s try, 1969; 6: 43. With 1 ⁇ 2 g of cyanin Peptide complex plus complete Freund's adjuvant was used to immunize rabbits.
  • Suitable oligonucleotide fragments selected from the polynucleotides of the present invention are used as hybridization probes in a variety of ways.
  • the probes can be used to hybridize to genomic or cDNA libraries of normal tissue or pathological tissue from different sources to It is determined whether it contains the polynucleotide sequence of the present invention and a homologous polynucleotide sequence is detected.
  • the probe can be used to detect the polynucleotide sequence of the present invention or its homologous polynucleotide sequence in normal tissue or pathology. Whether the expression in tissue cells is abnormal.
  • the purpose of this embodiment is to select a suitable oligonucleotide fragment from the polynucleotide SEQ ID NO: 1 of the present invention as a hybridization probe, and to identify whether some tissues contain the polynucleoside of the present invention by a filter hybridization method Acid sequence or a homologous polynucleotide sequence thereof.
  • Filter hybridization methods include dot blotting, Southern imprinting, Northern blotting, and copying methods. They all use the same steps to immobilize the polynucleotide sample to be tested on the filter.
  • the sample-immobilized filter is first pre-hybridized with a probe-free hybridization buffer to saturate the non-specific binding site of the sample on the filter with the carrier and the synthesized polymer.
  • the pre-hybridization solution is then replaced with a hybridization buffer containing labeled probes and incubated to hybridize the probes to the target nucleic acid.
  • the unhybridized probes are removed by a series of membrane washing steps.
  • This embodiment uses higher-intensity washing conditions (such as lower salt concentration and higher temperature), so that the hybridization background is reduced and only strong specific signals are retained.
  • the probes used in this embodiment include two types: the first type of probes are oligonucleotide fragments that are completely the same as or complementary to the polynucleotide SEQ ID NO: 1 of the present invention; the second type of probes are partially related to the present invention
  • the polynucleotide SEQ ID NO: 1 is the same or complementary oligonucleotide fragment.
  • the dot blot method is used to fix the sample on the filter membrane. Under the high-intensity washing conditions, the first type of probe and the sample have the strongest hybridization specificity and are retained.
  • oligonucleotide fragments from the polynucleotide SEQ ID NO: 1 of the present invention for use as hybridization probes should follow the following principles and several aspects to be considered:
  • the preferred range of probe size is 18-50 nucleotides
  • Those that meet the above conditions can be used as primary selection probes, and then further computer sequence analysis, including the primary selection probe and its source sequence region (ie, SEQ ID NO: 1) and other known genomic sequences and their complements The regions are compared for homology. If the homology with the non-target molecular region is greater than 85% or there are more than 15 consecutive bases, the primary probe should not be used;
  • Probe 1 which belongs to the first type of probe, is completely homologous or complementary to the gene fragment of SEQ ID NO: 1 (41Nt):
  • Probe which belongs to the second type of probe, is equivalent to the replacement mutant sequence of the gene fragment of SEQ ID NO: 1 or its complementary fragment (41Nt):
  • step 8-13 are only used when contamination must be removed, otherwise step 14 can be performed directly.
  • NC membrane nitrocellulose membrane
  • Probes 1 3 ⁇ l Probe (0.1OD / 10 ⁇ 1), add 2 ⁇ IKinase buffer, 8-10 uCi ⁇ - 32 P- dATP + 2U Kinase, to make up to a final volume of 20 ⁇ 1.
  • the 32 P-Probe (the second peak is free ⁇ - 32 P-dATP) is prepared.
  • Gene chip or gene microarray is a new technology currently being developed by many national laboratories and large pharmaceutical companies. It refers to the orderly and high-density arrangement of a large number of target gene fragments on slopes , Silicon and other carriers, and then use fluorescence detection and computer software to compare and analyze the data, in order to achieve the purpose of rapid, efficient, high-throughput analysis of biological information.
  • the polynucleotide of the present invention can be used as target DNA for gene chip technology for high-throughput research of new gene functions; search for and screen new tissue-specific genes, especially new genes related to diseases such as tumors; diagnosis of diseases such as hereditary diseases . The specific method steps have been reported in the literature.
  • a total of 4,000 polynucleotide sequences of various full-length cDMs are used as target DNA, including the polynucleotide of the present invention. They were amplified by PCR respectively. After purification, the amplified product was adjusted to a concentration of about 500 ng / ul, and spotted on a glass medium with a Cartesian 7500 spotter (purchased from Cartesian Company, USA). The distance between them is 280 ⁇ ⁇ . The spotted slides were hydrated, dried, and cross-linked in a purple diplomatic coupling instrument. After elution, the DNA was fixed on a glass slide to prepare a chip. The specific method steps have been reported in the literature in various ways. The post-spot processing steps of this embodiment are:
  • Total mRNA was extracted from human mixed tissues and specific tissues (or stimulated cell lines) in one step, and the mRNA was purified with Oligotex mRNA Midi Ki t (purchased from QiaGen).
  • Cy 3dUTP (5-Am i no-pr opa r gy 1 -2- -deoxyur idi ne 5--tr iphate coupled to Cy3 f luorescent dye, purchased from Amersham Phamacia Biotech)
  • the mRM of human mixed tissues was labeled with a fluorescent reagent Cy5dUTP (5- Amino- propargyl-2'-deoxyur idine 5'-tr iphate coupled to Cy5 f luorescent dye, purchased from Amersham Pharaacia Biotech). Cell line) mRM, probes were prepared after purification. For specific steps and methods, see:
  • the probes from the above two types of tissues were hybridized with the chip in a UniHyb TM Hybridization Solution (purchased from TeleChem) hybridization solution for 16 hours, and washed with a washing solution (lx SSC, 0.2% SDS) at room temperature. Scanning was performed with a ScanArray 3000 scanner (purchased from General Scanning, USA), and the scanned images were analyzed and processed with Imagene software (Biodiscovery, USA) to calculate the Cy3 / Cy5 ratio of each point.
  • the above specific tissues are fetal brain, bladder mucosa, PMA + Ecv304 cell line, LPS + Ecv304 cell line, thymus, normal fibroblasts 1024NC, Fibroblas t, growth factor stimulation, 1024NT, scar formation fc growth factor stimulation, 1013HT, scar into fc without growth factor stimulation, bladder cancer cell EJ, bladder cancer, bladder cancer, liver cancer, liver cancer cell line, fetal skin, spleen, prostate cancer, jejunum adenocarcinoma, cardia cancer. Draw a graph based on these 18 Cy3 / Cy5 ratios. (figure 1 ) . It can be seen from the figure that the expression profiles of human bundle and elongation protein 16.61 and human FEZ1 protein according to the present invention are very similar. Industrial applicability
  • polypeptide of the present invention and the antagonists, agonists and inhibitors of the polypeptide can be directly used in the treatment of diseases, for example, it can treat malignant tumors, adrenal deficiency, skin diseases, various inflammations, HIV infections and immune diseases.
  • Human FEZ1 protein has two functions: first, it plays an important role in the formation and / or maintenance of nerve fiber bundles through interaction with cell surface adhesion proteins, axon membranes, and cytoskeleton; etc. The cell surface is passed inside the cell to regulate the axon extension and adhesion. Abnormal expression of human FEZ1 protein in vivo can affect the formation and / or maintenance of nerve fiber bundles, and then lead to the occurrence of related diseases.
  • the expression profile of the polypeptide of the present invention is consistent with the expression profile of the human FEZ1 protein, and both have similar biological functions.
  • the polypeptide of the present invention has an important role in the formation and / or maintenance of nerve fiber bundles in the body, and its abnormal expression can lead to the development of neurological malformations and / or dysfunctional diseases, including but not limited to: Malformations: neural tube defects (no cerebral malformations, spina bifida, spinal meningocele, hydrocephalous meningoencephalocele), hydrocephalus in / outside the brain, etc.
  • Frontal lobe dementia, personality changes (frontal frontal), strabismus, inability to write (back middle frontal gyrus), motor aphasia (back frontal gyrus), loss of smell (Bottom of frontal lobe), limb paralysis, convulsions (central gyrus), etc .;
  • Parietal lobe sensory disturbance (central posterior gyrus), dyslexia (left corner gyrus), body image disorder (right parietal lobe), etc .;
  • Temporal lobe Hookback attack (anterior temporal lobe), sensory / amnestic aphasia (left temporal lobe), hearing impairment (rear superior temporal gyrus), etc.
  • Occipital lobe hemianopia, hallucinations, visual disagreement, etc.
  • V. Limbic system emotional symptoms, memory loss, disturbance of consciousness, hallucinations, etc.
  • Peripheral nervous system includes: 12 pairs of brain nerves, 31 pairs of spinal nerves, and autonomic nerves (sympathetic and parasympathetic). Its functional disorders can lead to the occurrence of related diseases or / and clinical symptoms. These diseases or / and clinical symptoms include, but are not limited to:
  • Loss of olfactory taste olfactory nerve
  • visual impairment and / or visual field defect ophthalmoplegia
  • diplopia changes in pupil size / reflexes (eye movement nerve, pulley nerve, abductor nerve), facial sensory disorders, masticatory muscles Paralysis, neuroparalytic keratitis (trigeminal nerve), facial paralysis (facial nerve), deafness, tinnitus, vertigo, balance disorders, nystagmus (auditory nerve), hoarseness, dysphagia, loss of pharyngeal reflex (glossopharyngeal nerve, vagus nerve), shoulder Sagging, turning neck / shrugs, fatigue (collateral nerve), lingual muscle paralysis (sublingual nerve), etc .;
  • Paresthesia Inhibitory paresthesia (lack of sensation, hypoparesis), irritating paresthesia (allergy, paresthesia, pain), etc .;
  • Dyskinesias central paralysis (monoplegia, hemiplegia, paraplegia), peripheral paralysis, etc .; 3. Autonomic (sympathetic and parasympathetic) disorders:
  • Cardio-cerebral vascular system
  • arrhythmias such as early atrial, early ventricular, sinus tachycardia, supraventricular tachycardia, ventricular tachycardia, atrial flutter, atrial fibrillation, sinus bradycardia, sinus arrest,
  • Sinus syndrome indoor conduction block, etc .
  • CAD angina pectoris
  • myocardial infarction cardiovascular neurosis
  • acute heart failure chronic heart failure
  • HBP chronic heart failure
  • Pulmonary edema respiratory muscle paralysis, respiratory failure, bronchial asthma, etc .
  • Gastrointestinal neurosis Hydatid disease, psychogenic vomiting, neurogenic qi, anorexia nervosa, irritable bowel syndrome, etc .;
  • Diabetes hypoglycemia, lipidemia, hyperlipoproteinemia, obesity, pheochromocytoma, etc .;
  • dysmenorrhea dysmenorrhea, glaucoma, visual impairment and ischemic necrosis of multiple organs, such as renal necrosis (renal failure), liver necrosis, intestinal necrosis, etc .;
  • polypeptide of the present invention and the antagonists, agonists and inhibitors of the polypeptide can be directly used for the treatment of various diseases, such as developmental disorders of the nervous system and / or dysfunctional diseases.
  • the invention also provides methods of screening compounds to identify agents that increase (agonist) or suppress (antagonist) human bundling and elongation of 16.61.
  • Agonists enhance biological functions such as human bundling and elongation 16.61 to stimulate cell proliferation, while antagonists prevent and treat disorders related to excessive cell proliferation, such as various cancers.
  • a mammalian cell or a human expressing bundle and elongation protein 16.61 of Membrane formulations were cultured with labeled human bundling and elongin 16.61. The ability of the drug to increase or block this interaction is then determined.
  • Antagonists of human bundling and elongation proteins 16.61 include antibodies, compounds, receptor deletions, and the like that have been screened. Antagonists of human bundling and elongin 16.61 can bind to human bundling and elongin 16.61 and eliminate its function, or inhibit the production of the polypeptide, or bind to the active site of the polypeptide to make the polypeptide Cannot perform biological functions.
  • human bundles and elongin 16.61 can be added to bioanalytical assays by measuring the effects of compounds on the interactions between human bundles and elongin 16.61 and their receptors Determine if the compound is an antagonist.
  • Receptor deletions and analogs that act as antagonists can be screened in the same way as for screening compounds described above.
  • Polypeptide molecules capable of binding to human bundling and elongation protein 16.61 can be obtained by screening a random peptide library composed of various possible combinations of amino acids bound to a solid phase. In screening, human bundles and elongin 16.61 molecules should generally be labeled.
  • the present invention provides a method for producing antibodies using polypeptides, and fragments, derivatives, analogs or cells thereof as antigens. These antibodies can be polyclonal or monoclonal antibodies.
  • the invention also provides antibodies directed against human bunching and elongating protein 16.61 epitopes. These antibodies include (but are not limited to): polyclonal antibodies, monoclonal antibodies, chimeric antibodies, single chain antibodies, Fab fragments, and fragments generated from Fab expression libraries.
  • polyclonal antibodies can be obtained by human bunching and elongating protein 16.61 by direct injection into immunized animals (such as rabbits, mice, rats, etc.).
  • immunized animals such as rabbits, mice, rats, etc.
  • a variety of adjuvants can be used to enhance the immune response, including but not limited to 'S adjuvant and so on.
  • Techniques for preparing monoclonal antibodies to human bundling and elongating protein 16.61 include, but are not limited to, hybridoma technology (Kohler and Miste in. Nature, 1975, 256: 495-497), triple tumor technology, human beta-cells Hybridoma technology, EBV-hybridoma technology, etc.
  • Chimeric antibodies that bind human constant regions and non-human-derived variable regions can be produced using existing techniques (Morrison et al, PNAS, 1985, 81: 6851).
  • the existing technology for producing single chain antibodies U.S. Pat No. 4946778, can also be used to produce single chain antibodies against human bundling and elongation protein 16.61.
  • Antibodies against human bundling and elongin 16.61 can be used in immunohistochemistry to detect human bundling and elongin 16.61 in biopsy specimens.
  • Monoclonal antibodies that bind to human bundling and elongation protein 16.61 can also be labeled with radioisotopes and injected into the body to track their location and distribution. This radiolabeled antibody can be used as a non-invasive diagnostic method to locate tumor cells and determine whether there is metastasis.
  • Antibodies can also be used to design immunotoxins against a specific bead site in the body. Such as human bundling and elongation protein 16.
  • 61 High affinity monoclonal antibodies can interact with bacterial or plant toxins (such as diphtheria toxin, ricin, Ormosine, etc.).
  • a common method is to attack the amino group of an antibody with a thiol cross-linking agent such as SPDP, and bind the toxin to the antibody through the exchange of disulfide bonds.
  • This hybrid antibody can be used to kill human bunching and elongating protein 16. Positive cells.
  • the antibodies of the present invention can be used to treat or prevent diseases associated with human bundling and elongation protein 16.61. Administration of appropriate doses of antibodies can stimulate or block the production or activity of human bundling and elongation proteins 16.61.
  • the invention also relates to a diagnostic test method for the quantitative and localized detection of human bundling and elongin 16.61 levels. These tests are well known in the art and include FI SH assays and radioimmunoassays. The level of human bundling and elongin 16.61 detected in the test can be used to explain the importance of human bundling and elongin 16.61 in various diseases and for the diagnosis of human bundling and elongin 16.61 A working disease.
  • polypeptide of the present invention can also be used for peptide mapping analysis.
  • the polypeptide can be specifically cleaved by physical, chemical or enzymatic analysis, and subjected to one-dimensional or two-dimensional or three-dimensional gel electrophoresis analysis, and more preferably mass spectrometry analysis.
  • Polynucleotides encoding human bundling and elongation proteins 16.61 can also be used for a variety of therapeutic purposes. Gene therapy techniques can be used to treat abnormal cell proliferation, development, or metabolism caused by the lack of expression or abnormal / inactive expression of human bundling and elongation protein 16.61.
  • Recombinant gene therapy vectors (such as viral vectors) can be designed to express mutated human bundling and elongating protein 16.61 to inhibit endogenous human bundling and elongating protein 16.61 activity.
  • a mutated human bundling and elongin 16.61 may be a shortened human bundling and elongin 16.61 that lacks a signaling domain, although it can bind to downstream substrates, but lacks signaling.
  • Recombinant gene therapy vectors can therefore be used to treat diseases caused by human bundling and elongation protein 16.61.
  • Virus-derived expression vectors such as retrovirus, adenovirus, adenovirus-associated virus, herpes simplex virus, parvovirus, etc. can be used to transfer polynucleotides encoding human bunching and elongating proteins 16.61 into cells.
  • Methods for constructing recombinant viral vectors carrying polynucleotides encoding human bundling and elongation proteins 16.61 can be found in existing literature (Sambrook, et al.).
  • a polynucleotide encoding human bundling and elongation protein 16.61 can be packaged into liposomes and transferred into cells.
  • Methods for introducing a polynucleotide into a tissue or cell include: directly injecting the polynucleotide into a tissue in vivo; or introducing the polynucleotide into a cell in vitro through a vector (such as a virus, phage, or plasmid), and then transplanting the cell Into the body and so on.
  • a vector such as a virus, phage, or plasmid
  • Oligonucleotides including antisense RNA and DM
  • ribozymes that inhibit human bundling and elongation of 16.61 mRM are also within the scope of the present invention.
  • a ribozyme is an enzyme-like RNA molecule that specifically decomposes specific RNA. Its mechanism of action is that the ribozyme molecule specifically hybridizes with a complementary target RNA for endonucleation.
  • Antisense RM and DNA and ribozymes can be obtained using any existing RNA or DM synthesis techniques, such as solid phase phosphorus The technology of synthesizing oligonucleotides by acid amide chemical synthesis has been widely used.
  • Antisense RM molecules can be obtained by in vitro or in vivo transcription of a DNA sequence encoding the RNA. This DM sequence has been integrated downstream of the vector's RNA polymerase promoter. In order to increase the stability of a nucleic acid molecule, it can be modified in a variety of ways, such as increasing the sequence length on both sides, and the ribonucleoside linkages should use phosphate thioester or peptide bonds instead of phosphodiester bonds.
  • the polynucleotide encoding human bundling and elongin 16.61 can be used for the diagnosis of diseases related to human bundling and elongin 16.61.
  • the polynucleotide encoding human bundling and elongation protein 16.61 can be used to detect the expression of human bundling and elongation protein 16.61 or abnormal expression of human bundling and elongation protein 16.61 in a disease state.
  • DNA sequences encoding human bunching and elongation protein 16.61 can be used to hybridize biopsy specimens to determine the expression of human bunching and elongation protein 16.61.
  • Hybridization techniques include Southern blotting, Nor thern blotting, and in situ hybridization.
  • kits are commercially available.
  • a part or all of the polynucleotides of the present invention can be used as probes to be fixed on a micro array or a DM chip (also called a "gene chip") for analyzing differential expression analysis and gene diagnosis of genes in tissues.
  • Human bundling and elongation 16.61 specific primers for RNA-polymerase chain reaction (RT-PCR) in vitro amplification can also detect human bundling and elongation 16.61 transcription products.
  • Detection of mutations in human bundling and elongin 16.61 can also be used to diagnose human bundling and elongation 16.61-related diseases.
  • Human bundling and elongation 16.61 mutations include point mutations, translocations, deletions, recombinations, and any other abnormalities compared to normal wild-type human bundling and elongation 16.61 DNA sequences. Mutations can be detected using existing techniques such as Southern blotting, DM sequence analysis, PCR and in situ hybridization. In addition, mutations may affect protein expression. Therefore, the Nor thern blotting and Western blotting can be used to indirectly determine whether a gene is mutated.
  • the sequences of the invention are also valuable for chromosome identification.
  • the sequence specifically targets a specific position on a human chromosome and can hybridize to it.
  • specific sites for each gene on the chromosome need to be identified.
  • only a few chromosome markers based on actual sequence data are available for marking chromosome positions.
  • an important first step is to locate these DNA sequences on a chromosome.
  • PCR primers (preferably 15-35bp) are prepared according to cDM, and the sequences can be located on chromosomes. These primers were then used for PCR screening of somatic hybrid cells containing individual human chromosomes. Only those heterozygous cells containing the human gene corresponding to the primer will produce amplified fragments.
  • PCR localization of somatic hybrid cells is a quick way to localize DNA to specific chromosomes.
  • oligonucleotide primers of the present invention by a similar method, a set of fragments from a specific chromosome can be utilized Or a large number of genomic clones to achieve sublocalization.
  • Other similar strategies that can be used for chromosomal localization include in situ hybridization, chromosome pre-screening with labeled flow sorting, and hybrid pre-selection to construct chromosome-specific cDNA libraries.
  • Fluorescent in situ hybridization of cDM clones with metaphase chromosomes allows precise chromosomal localization in one step.
  • FISH Fluorescent in situ hybridization
  • the physical location of the sequence on the chromosome can be correlated with the genetic map data. These data can be found in, for example, V. Mckusick, Mendelian Inherance in Man (available online with Johns Hopkins University Welch Medical Library). Linkage analysis can then be used to determine the relationship between genes and diseases that have been mapped to chromosomal regions.
  • cDNA or genomic sequence between the affected and unaffected individuals needs to be determined. If a mutation is observed in some or all diseased individuals and the mutation is not observed in any normal individuals, the mutation may be the cause of the disease. Comparing affected and unaffected individuals usually involves first looking for structural changes in chromosomes, such as deletions or translocations that are visible at the chromosomal level or detectable with cDNA sequence-based PCR. Based on the resolution capabilities of current physical mapping and gene mapping technologies, cDNAs that are accurately mapped to disease-related chromosomal regions can be one of 50 to 500 potentially pathogenic genes (assuming
  • the polypeptides, polynucleotides and mimetics, agonists, antagonists and inhibitors of the present invention can be used in combination with a suitable pharmaceutical carrier.
  • suitable pharmaceutical carrier can be water, glucose, ethanol, salts, buffers, glycerol, and combinations thereof.
  • the composition comprises a safe and effective amount of the polypeptide or antagonist, and carriers and excipients which do not affect the effect of the drug. These compositions can be used as drugs for the treatment of diseases.
  • the invention also provides a kit or kit containing one or more containers containing one or more ingredients of the pharmaceutical composition of the invention.
  • a kit or kit containing one or more containers containing one or more ingredients of the pharmaceutical composition of the invention.
  • these containers there may be instructional instructions given by government agencies that manufacture, use, or sell pharmaceuticals or biological products, which prompts permission for administration on the human body by government agencies that produce, use, or sell.
  • the polypeptides of the invention can be used in combination with other therapeutic compounds.
  • the pharmaceutical composition can be administered in a convenient manner, such as by a topical, intravenous, intraperitoneal, intramuscular, subcutaneous, intranasal or intradermal route of administration.
  • Human bundling and elongin 16.61 are administered in amounts effective to treat and / or prevent specific indications.
  • the amount and range of human bundling and elongin 16.61 administered to a patient will depend on many factors, such as the mode of administration, the health conditions of the person to be treated, and the judgment of the diagnostician.

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Abstract

The present invention discloses a novel polypeptide human fasciculation and elongation protein 16.61 and a polynucleotide encoding the same, as well as a method of producing the polypeptide by DNA recombinant technique. The present invention also discloses methods of using the polypeptide in treatment of various disease, such as developmental deformation and/or functional disturbance of nerve system and so on. The present invention also discloses an antagonist against the polypeptide and the therapeutic use of the same. The present invention also discloses the use of such polynucleotide encoding human fasciculation and elongation protein 16.61.

Description

一种新的多肽一一人成束和延伸蛋白 16.61和编码这种多肽的多核苷酸 技术领域  A new polypeptide one-to-one bundling and elongation protein 16.61 and a polynucleotide encoding such a polypeptide TECHNICAL FIELD
本发明属于生物技术领域, 具体地说, 本发明描述了一种新的多肽一一人 成束和延伸蛋白 16.61, 以及编码此多肽的多核苷酸序列。 本发明还涉及此多 核苷酸和多肽的制备方法和应用。 背景技术  The present invention belongs to the field of biotechnology. Specifically, the present invention describes a novel polypeptide, a human bundle and elongation protein 16.61, and a polynucleotide sequence encoding the polypeptide. The invention also relates to a preparation method and application of the polynucleotide and polypeptide. Background technique
经系统中, 轴突往往要穿过不同的细胞外环境才能到达目的地。 大多数轴 突沿着其他的轴突生长, 而将不同的轴突集中在神经束中, 很可能在神经系统 的组织中起重要的作用。 通过对线虫运动障碍的突变株的分析发现了一组基 因, 当它们发生突变时会影响神经纤维束中的轴突的生长, 但是在周围无神经 纤维的基质中的轴突则不受影响。 具体的说, 这组蛋白 ( unc-34, unc-71, unc76) 的突变会导致两种缺陷: 许多背 /腹神经索神经纤维束中的轴突不能够 伸长到正常的长度; 另外, 许多轴突也不能保持在正常情况下应该存在的神经 纤维束中。 unc- 76 可能的两个功能是: 其一, unc-76 蛋白可能通过与细胞表 面黏附蛋白, 轴突膜, 细胞骨架等的相互作用在神经纤维束的形成和 /或维持 中起重要作用; 其二, unc-76 蛋白可能将信号从细胞表面传递到细胞内部来调 节轴突的延伸和黏附。 【Proc. Natl. Acad. Sci. USA Vol. 94, pp. 3414-3419, April 1997】  In the meridian system, axons often have to pass through different extracellular environments to reach their destination. Most axons grow along other axons, and the concentration of different axons in the nerve bundle is likely to play an important role in the tissues of the nervous system. Analysis of mutants of nematode dyskinesia revealed a set of genes that, when mutated, affect the growth of axons in the nerve fiber bundles, but axons in the matrix without surrounding nerve fibers are not affected. Specifically, mutations in this group of proteins (unc-34, unc-71, unc76) can cause two types of defects: many axons in the dorsal / abdominal nerve fiber bundles cannot stretch to their normal length; in addition, Many axons also fail to stay in the nerve fiber bundles that should normally be present. The two possible functions of unc-76 are: First, the unc-76 protein may play an important role in the formation and / or maintenance of nerve fiber bundles through interaction with cell surface adhesion proteins, axon membranes, and cytoskeleton; Second, the unc-76 protein may transmit signals from the cell surface to the inside of the cell to regulate the axon extension and adhesion. [Proc. Natl. Acad. Sci. USA Vol. 94, pp. 3414-3419, April 1997]
人类的 unc- 76人 FEZ1蛋白称为 (成束和延伸蛋白 ζ - 1) 。 它由 393 个氨基酸残基构成, 精氨酸 /谷氨酸含量高, 其 Ν 端是高度酸化的, 有些部位 含有两性螺旋。 FEZ1 没有信号序列, 也没有跨膜区域, 这一性质暗示它是存在 于细胞内部的。 FEZ1在成年鼠脑和鼠胚胎中的表达都表达较高。 FEZ1可以与 PKCZ ζ亚基的 Ν 端可变区域相互作用, 还可以同 Ρ σ发生弱的相互作用。 这说明 FEZ1是 PKC的底物之一。 FEZ1在哺乳动物中通过 PKC ζ相互作用发挥其轴突导 向的关键作用。 【Proc Natl Acad Sci U S A 1999 Mar 30; 96 (7) : 3928-33】 通过基因芯片的分析发现,在膀胱粘膜、 PMA+的 Ecv304细胞株、 LPS+的 Ecv304 细胞株胸腺、 正常成纤维细胞 1024NC, Fibroblast, 生长因子刺激, 1024NT, 疤痕成 fc生长因子刺激, 1013HT、 疤痕成 fc未用生长因子刺激, 1013HC、 膀 胱癌建株细胞 EJ、 膀胱癌旁、 膀胱癌、 肝癌、 肝癌细胞株、 胎皮、 脾脏、 前列 腺癌、 空肠腺癌、 贲门癌中, 本发明的多肽的表达谱与人 FEZ1 蛋白的表达谱 非常近似, 因此二者功能也可能类似。 本发明^ 为人成束和延伸蛋白The human unc-76 human FEZ1 protein is called (bundling and elongating protein ζ-1). It consists of 393 amino acid residues. It has a high content of arginine / glutamic acid, its N-terminus is highly acidified, and some sites contain amphoteric helixes. FEZ1 has no signal sequence and no transmembrane region. This property implies that it exists inside the cell. FEZ1 is highly expressed in both adult mouse brain and mouse embryo. FEZ1 can interact with the N-terminal variable region of the PKCZ zeta subunit, and can also interact weakly with Pσ. This shows that FEZ1 is one of the substrates of PKC. FEZ1 plays a key role in axon guidance in mammals through PKC zeta interactions. [Proc Natl Acad Sci USA 1999 Mar 30; 96 (7): 3928-33] Gene chip analysis revealed that in the bladder mucosa, PMA + Ecv304 cell line, LPS + Ecv304 cell line thymus, normal fibroblasts 1024NC, Fibroblast , Growth factor stimulation, 1024NT, scar into fc growth factor stimulation, 1013HT, scar into fc without growth factor stimulation, 1013HC, bladder cancer cell EJ, bladder cancer, bladder cancer, liver cancer, liver cancer cell line, fetal skin, In spleen, prostate cancer, jejunum adenocarcinoma, and cardia cancer, the expression profile of the polypeptide of the present invention and the expression profile of human FEZ1 protein They are very similar, so their functions may be similar. The present invention ^ Human bundling and elongation protein
16. 61。 ,; 16. 61. ,;
由于如上所述人成束和延伸蛋白 16. 61 蛋白在调节细胞分裂和胚胎发育等 机体重要功能中起重要作用, 而且相信这些调节过程中涉及大量的蛋白, 因而 本领域中一直需要鉴定更多参与这些过程的人成束和延伸蛋白 16. 61 蛋白, 特 别是鉴定这种蛋白的氨基酸序列。 新人成束和延伸蛋白 16. 61 蛋白编码基因的 分离也为研究确定该蛋白在健康和疾病状态下的作用提供了基础。 这种蛋白可 能构成开发疾 1 病诊断和 /或治疗药的基础, 因此分离其编码 DM 是非常重要 的。 发明的公开  As described above, the human bundling and elongation protein 16.61 protein plays an important role in regulating important functions of the body such as cell division and embryonic development, and it is believed that a large number of proteins are involved in these regulatory processes, so more needs to be identified in the art The human bunching and elongating protein 16.61 protein involved in these processes, especially the amino acid sequence of this protein is identified. Newcomer bundling and elongation protein 16.61 The isolation of protein-coding genes also provides the basis for research to determine the role of this protein in health and disease states. This protein may form the basis for the development of diagnostic and / or therapeutic drugs for diseases, so it is important to isolate its coding DM. Disclosure of invention
本发明的一个目的是提供分离的新的多肽一一人成束和延伸蛋白 16. 61 以 及其片段、 类似物和衍生物。  It is an object of the present invention to provide isolated novel polypeptides-human bundles and elongins 16.61 and fragments, analogs and derivatives thereof.
本发明的另一个目的是提供编码该多肽的多核苷酸。  Another object of the invention is to provide a polynucleotide encoding the polypeptide.
本发明的另一个目的是提供含有编码人成束和延伸蛋白 16. 61 的多核苷酸 的重组载体。  It is another object of the present invention to provide a recombinant vector containing a polynucleotide encoding human bundling and elongating protein 16.61.
本发明的另一个目的是提供含有编码人成束和延伸蛋白 16. 61 的多核苷酸 的基因工程化宿主细胞。  Another object of the present invention is to provide a genetically engineered host cell containing a polynucleotide encoding human bunching and elongation proteins 16.61.
本发明的另一个目的是提供生产人成束和延伸蛋白 16. 61的方法。  Another object of the present invention is to provide a method for producing human bundling and elongating protein 16.61.
本发明的另一个目的是提供针对本发明的多肽一一人成束和延伸蛋白 16. 61 的抗体。  Another object of the present invention is to provide antibodies against the human polypeptide bundling and elongating protein 16.61 of the polypeptide of the present invention.
本发明的另一个目的是提供了针对本发明多肽一一人成束和延伸蛋白 16. 61 的模拟化合物、 拮抗剂、 激动剂、 抑制剂。  Another object of the present invention is to provide mimic compounds, antagonists, agonists, and inhibitors of one-to-one bundling and elongation proteins 16.61 of the polypeptide of the present invention.
本发明的另一个目的是提供诊断治疗与人成束和延伸蛋白 16. 61 异常相关 的疾病的方法。  Another object of the present invention is to provide a method for diagnosing and treating diseases associated with abnormalities in human bundling and elongin 16.61.
本发明涉及一种分离的多肽, 该多肽是人源的, 它包含: 具有 SEQ ID No. 2 氨基酸序列的多肽、 或其保守性变体、 生物活性片段或衍生物。 较佳地, 该多 肽是具有 SEQ ID NO: 2氨基酸序列的多肽。  The present invention relates to an isolated polypeptide, which is of human origin and comprises: a polypeptide having the amino acid sequence of SEQ ID No. 2, or a conservative variant, biologically active fragment or derivative thereof. Preferably, the polypeptide is a polypeptide having the amino acid sequence of SEQ ID NO: 2.
本发明还涉及一种分离的多核苷酸, 它包含选自下组的一种核苷酸序列或 其变体:  The invention also relates to an isolated polynucleotide comprising a nucleotide sequence or a variant thereof selected from the group consisting of:
(a)编码具有 SEQ ID No. 2氨基酸序列的多肽的多核苷酸;  (a) a polynucleotide encoding a polypeptide having the amino acid sequence of SEQ ID No. 2;
(b)与多核苷酸(a)互补的多核苷酸; (c)与(a)或(b)的多核苷酸序列具有至少 70%相同性的多核苷酸。 更佳地, 该多核苷酸的序列是选自下组的一种: (a)具有 SEQ ID NO: 1 中 701- 1156位的序列; 和(b)具有 SEQ ID NO: 1中 1-1721位的序列。 (b) a polynucleotide complementary to polynucleotide (a); (c) A polynucleotide having at least 70% identity to a polynucleotide sequence of (a) or (b). More preferably, the sequence of the polynucleotide is one selected from the group consisting of: (a) a sequence having positions 701-1156 in SEQ ID NO: 1; and (b) a sequence having 1-1721 in SEQ ID NO: 1 Sequence of bits.
本发明另外涉及一种含有本发明多核苷酸的载体, 特别是表达载体; 一种 用该载体遗传工程化的宿主细胞, 包括转化、 转导或转染的宿主细胞; 一种包 括培养所述宿主细胞和回收表达产物的制备本发明多肽的方法。  The present invention further relates to a vector, particularly an expression vector, containing the polynucleotide of the present invention; a host cell genetically engineered with the vector, including a transformed, transduced or transfected host cell; Host cell and method of preparing the polypeptide of the present invention by recovering the expression product.
本发明还涉及一种能与本发明多肽特异性结合的抗体。  The invention also relates to an antibody capable of specifically binding to a polypeptide of the invention.
本发明还涉及一种筛选的模拟、 激活、 拮抗或抑制人成束和延伸蛋白 16. 61 蛋白活性的化合物的方法, 其包括利用本发明的多肽。 本发明还涉及用该方法 获得的化合物。  The invention also relates to a method for screening compounds that mimic, activate, antagonize or inhibit human bundling and elongation protein 16.61 protein activity, which comprises utilizing a polypeptide of the invention. The invention also relates to compounds obtained by this method.
本发明还涉及一种体外检测与人成束和延伸蛋白 16. 61 蛋白异常表达相关 的疾病或疾病易感性的方法, 包括检测生物样品中所述多肽或其编码多核苷酸序 列中的突变, 或者检测生物样品中本发明多肽的量或生物活性。  The invention also relates to a method for in vitro detection of a disease or susceptibility to disease associated with abnormal expression of human bunching and elongation 16.61 protein, comprising detecting mutations in the polypeptide or a sequence encoding a polynucleotide thereof in a biological sample, Alternatively, the amount or biological activity of a polypeptide of the invention in a biological sample is detected.
本发明也涉及一种药物组合物, 它含有本发明多肽或其模拟物、 激活剂、 拮 抗剂或抑制剂以及药学上可接受的载体。  The invention also relates to a pharmaceutical composition comprising a polypeptide of the invention or a mimetic thereof, an activator, an antagonist or an inhibitor, and a pharmaceutically acceptable carrier.
本发明还涉及本发明的多肽和 /或多核苷酸在制备用于治疗癌症、 发育性 疾病或免疫性疾病或其它由于人成束和延伸蛋白 16. 61 表达异常所引起疾病的 药物的用途。  The invention also relates to the use of the polypeptides and / or polynucleotides of the invention for the manufacture of a medicament for the treatment of cancer, developmental or immune diseases or other diseases caused by abnormal expression of human bundling and elongation protein 16.61.
本发明的其它方面由于本文的技术的公开, 对本领域的技术人员而言是显而 易见的。  Other aspects of the invention will be apparent to those skilled in the art from the disclosure of the techniques herein.
夺说明书和权利要求书中使用的下列术语除非特别说明具有如下的含义: "核酸序列" 是指寡核苷酸、 核苷酸或多核苷酸及其片段或部分, 也可以 指基因组或合成的 DNA或 RNA , 它们可以是单链或双链的, 代表有义链或反义链。 类似地, 术语 "氨基酸序列" 是指寡肽、 肽、 多肽或蛋白质序列及其片段或部 分。 当本发明中的 "氨基酸序列" 涉及一种天然存在的蛋白质分子的氨基酸序 列时, 这种 "多肽" 或 "蛋白质" 不意味着将氨基酸序列限制为与所述蛋白质 分子相关的完整的天然氨基酸。  The following terms used in the specification and claims have the following meanings unless specifically stated otherwise: "Nucleic acid sequence" refers to an oligonucleotide, a nucleotide or a polynucleotide and a fragment or part thereof, and may also refer to a genomic or synthetic DNA or RNA, they can be single-stranded or double-stranded, representing the sense or antisense strand. Similarly, the term "amino acid sequence" refers to an oligopeptide, peptide, polypeptide or protein sequence and fragments or portions thereof. When the "amino acid sequence" in the present invention relates to the amino acid sequence of a naturally occurring protein molecule, such "polypeptide" or "protein" does not mean to limit the amino acid sequence to a complete natural amino acid related to the protein molecule .
蛋白质或多核苷酸 "变体" 是指一种具有一个或多个氨基酸或核苷酸改变 的氨基酸序列或编码它的多核苷酸序列。 所述改变可包括氨基酸序列或核苷酸 序列中氨基酸或核苷酸的缺失、 插入或替换。 变体可具有 "保守性" 改变, 其 中替换的氨基酸具有与原氨基酸相类似的结构或化学性质, 如用亮氨酸替换异 亮氨酸。 变体也可具有非保守性改变, 如用色氨酸替换甘氨酸。 "缺失" 是指在氨基酸序列或核苷酸序列中一个或多个氨基酸或核苷酸的 缺失。 A protein or polynucleotide "variant" refers to an amino acid sequence having one or more amino acids or nucleotide changes, or a polynucleotide sequence encoding it. The changes may include deletions, insertions or substitutions of amino acids or nucleotides in the amino acid sequence or nucleotide sequence. Variants may have "conservative" changes in which the substituted amino acid has a structural or chemical property similar to the original amino acid, such as replacing isoleucine with leucine. Variants can also have non-conservative changes, such as replacing glycine with tryptophan. "Deletion" refers to the deletion of one or more amino acids or nucleotides in an amino acid sequence or nucleotide sequence.
"插入" 或 "添加" 是指在氨基酸序列或核苷酸序列中的改变导致与天然存在 的分子相比, 一个或多个氨基酸或核苷酸的增加。 "替换" 是指由不同的氨基酸或 核苷酸替换一个或多个氨基酸或核苷酸。  "Insertion" or "addition" refers to an alteration in the amino acid sequence or nucleotide sequence that results in an increase in one or more amino acids or nucleotides compared to a naturally occurring molecule. "Replacement" refers to the replacement of one or more amino acids or nucleotides with different amino acids or nucleotides.
"生物活性" 是指具有天然分子的结构、 调控或生物化学功能的蛋白质。 类似 地, 术语 "免疫学活性" 是指天然的、 重组的或合成蛋白质及其片段在合适的动 物或细胞中诱导特定免疫反应以及与特异性抗体结合的能力。  "Biological activity" refers to a protein that has the structure, regulation, or biochemical function of a natural molecule. Similarly, the term "immunologically active" refers to the ability of natural, recombinant or synthetic proteins and fragments thereof to induce a specific immune response in appropriate animals or cells and to bind to specific antibodies.
"激动剂" 是指当与人成束和延伸蛋白 16. 61结合时, 一种可引起该蛋白质 改变从而调节该蛋白质活性的分子。 激动剂可以包括蛋白质、 核酸、 碳水化合 物或任何其它可结合人成束和延伸蛋白 16. 61的分子。  An "agonist" refers to a molecule that, when combined with human bundling and elongating protein 16.61, can cause the protein to change, thereby regulating the activity of the protein. An agonist may include a protein, a nucleic acid, a carbohydrate, or any other molecule that binds human bundling and elongating proteins 16.61.
"拮抗剂" 或 "抑制物" 是指当与人成束和延伸蛋白 16. 61结合时, 一种可 封闭或调节人成束和延伸蛋白 16. 61的生物学活性或免疫学活性的分子。 拮抗 剂和抑制物可以包括蛋白质、 核酸、 碳水化合物或任何其它可结合人成束和延 伸蛋白 16. 61的分子。  An "antagonist" or "inhibitor" refers to a molecule that, when combined with human bundling and elongin 16.61, can block or regulate the biological or immunological activity of human bundling and elongin 16.61. . Antagonists and inhibitors may include proteins, nucleic acids, carbohydrates, or any other molecule that binds human bunching and elongating proteins 16.61.
"调节" 是指人成束和延伸蛋白 16. 61的功能发生改变, 包括蛋白质活性的 升高或降低、 结合特性的改变及人成束和延伸蛋白 16. 61的任何其它生物学性 质、 功能或免疫性质的改变。  "Regulation" refers to changes in the function of human bundling and elongin 16.61, including an increase or decrease in protein activity, changes in binding characteristics, and any other biological properties and functions of human bundling and elongation 16.61 Or changes in immune properties.
"基本上纯' '是指基本上不含天然与其相关的其它蛋白、脂类、糖类或其它物质。 本领域的技术人员能用标准的蛋白质纯化技术纯化人成束和延伸蛋白 16. 61。 基本 上纯的人成束和延伸蛋白 16. 61 在非还原性聚丙烯酰胺凝胶上能产生单一的主带。 人成束和延伸蛋白 16. 61多肽的纯度可用氨基酸序列分析。  "Substantially pure '" means essentially free of other proteins, lipids, sugars or other substances with which it is naturally associated. Those skilled in the art can use standard protein purification techniques to purify human bundling and elongating proteins 16.61 Basically pure human bundles and elongins 16.61 can produce a single main band on a non-reducing polyacrylamide gel. Human bundles and elongins 16.61 The purity of the polypeptide can be analyzed by amino acid sequence.
"互补的" 或 "互补" 是指在允许的盐浓度和温度条件下通过碱基配对的 多核苷酸天然结合。 例如, 序列 "C- T-G- A" 可与互补的序列 "G- A- C- T" 结合。 两个单链分子之间的互补可以是部分的或全部的。 核酸链之间的互补程度对于 核酸链之间杂交的效率及强度有明显影响。  "Complementary" or "complementary" refers to the natural binding of polynucleotides by base-pairing under conditions of acceptable salt concentration and temperature. For example, the sequence "C-T-G-A" can be combined with the complementary sequence "G-A-C-T". The complementarity between two single-stranded molecules may be partial or complete. The degree of complementarity between nucleic acid strands has a significant effect on the efficiency and strength of hybridization between nucleic acid strands.
"同源性" 是指互补的程度, 可以是部分同源或完全同源。 "部分同源" 是指一种部分互补的序列, 其至少可部分抑制完全互补的序列与靶核酸的杂 交。 这种杂交的抑制可通过在严格性程度降低的条件下进行杂交 (Southern印 迹或 Nor thern印迹等) 来检测。 基本上同源的序列或杂交探针可竟争和抑制完 全同源的序列与靶序列在的严格性程度降低的条件下的结合。 这并不意味严格 性程度降低的条件允许非特异性结合, 因为严格性程度降低的条件要求两条序 列相互的结合为特异性或选择性相互作用。 "Homology" refers to the degree of complementarity and can be partially homologous or completely homologous. "Partial homology" refers to a partially complementary sequence that at least partially inhibits hybridization of a fully complementary sequence to a target nucleic acid. The inhibition of such hybridization can be detected by performing hybridization (Southern blotting or Nor thern blotting, etc.) under conditions of reduced stringency. Substantially homologous sequences or hybridization probes can compete and inhibit the binding of completely homologous sequences to the target sequence under conditions of reduced stringency. This does not mean that conditions with reduced stringency allow non-specific binding, because conditions with reduced stringency require two sequences Columns are bound to each other as specific or selective interactions.
"相同性百分率" 是指在两种或多种氨基酸或核酸序列比较中序列相同或 相似的百分率。 可用电子方法测定相同性百分率, 如通过 MEGALIGN程序 ( Lasergene sof tware package, DNASTAR, Inc. , Madi son Wi s. ) 。 MEGALIGN 程序可根据不同的方法如 Clus ter法比较两种或多种序列(Hi gg ins , D. G. 和 P. M. Sharp (1988) Gene 73: 237-244) 0 Clus ter法通过检查所有配对之间的 距离将各组序列排列成簇。 然后将各簇以成对或成组分配。 两个氨基酸序列如 序列 A和序列 B之间的相同性百分率通过下式计算: 序列 A与序列 B之间匹配的残基个数 X 100 序列 A的残基数一序列 A中间隔残基数一序列 B中间隔残基数 也可以通过 C lus ter法或用本领域周知的方法如; Fotun Hein 测定核酸序列 之间的相同性百分率(Hein J., (1990) Methods in emzumo logy 183: 625-645)„ "相似性 " 是指氨基酸序列之间排列对比时相应位置氨基酸残基的相同或 保守性取代的程度。 用于保守性取代的氨基酸例如, 带负电荷的氨基酸可包括 天冬氨酸和谷氨酸; 带正电荷的氨基酸可包括赖氨酸和精氨酸; 具有不带电荷 的头部基团有相似亲水性的氨基酸可包括亮氨酸、 异亮氨酸和缬氨酸; 甘氨酸 和丙氨酸; 天冬酰胺和谷氨酰胺; 丝氨酸和苏氨酸; 苯丙氨酸和酪氨酸。 "Percent identity" refers to the percentage of sequences that are identical or similar in the comparison of two or more amino acid or nucleic acid sequences. The percent identity can be determined electronically, such as by the MEGALIGN program (Lasergene sof tware package, DNASTAR, Inc., Madi son Wis.). The MEGALIGN program can compare two or more sequences according to different methods such as the Clus ter method (Hi gg ins, DG and PM Sharp (1988) Gene 73: 237-244). 0 The Clus ter method will check the distance between all pairs by Groups of sequences are arranged in clusters. The clusters are then assigned in pairs or groups. The percent identity between two amino acid sequences such as sequence A and sequence B is calculated by the following formula: The number of matching residues between sequence A and sequence X 100 The number of residues in sequence A-the number of spacer residues in sequence A The number of spacer residues in a sequence B can also be determined by the Cluster method or by methods known in the art such as; Fotun Hein to determine the percent identity between nucleic acid sequences (Hein J., (1990) Methods in emzumo logy 183: 625 -645) "" Similarity "refers to the degree of identical or conservative substitutions of amino acid residues at corresponding positions when the alignment between amino acid sequences is aligned. Amino acids used for conservative substitutions For example, negatively charged amino acids may include aspartic acid Acids and glutamic acid; Positively charged amino acids can include lysine and arginine; Amino acids with similarly hydrophilic head groups that have no charge can include leucine, isoleucine, and valine Acids; glycine and alanine; asparagine and glutamine; serine and threonine; phenylalanine and tyrosine.
"反义" 是指与特定的 DNA或 RM序列互补的核苷酸序列。 "反义链" 是指 与 "有义链" 互补的核酸链。  "Antisense" refers to a nucleotide sequence that is complementary to a particular DNA or RM sequence. "Antisense strand" refers to a nucleic acid strand that is complementary to a "sense strand."
"衍生物" 是指 HFP或编码其的核酸的化学修饰物。 这种化学修饰物可以是 用垸基、 酰基或氨基替换氢原子。 核酸衍生物可编码保留天然分子的主要生物 学特性的多肽。  "Derivative" refers to a chemical modification of HFP or a nucleic acid encoding it. This chemical modification may be a substitution of a hydrogen atom with a fluorenyl, acyl or amino group. Nucleic acid derivatives can encode polypeptides that retain the main biological properties of natural molecules.
"抗体" 是指完整的抗体分子及其片段, 如 Fa、 ?(^') 2及?^ 其能特异 性结合人成束和延伸蛋白 16. 61的抗原决定簇。 "Antibody" refers to a complete antibody molecule and its fragments, such as Fa,? (^ ') 2 and? ^ It can specifically bind to human bunching and elongation of 16.61 epitopes.
"人源化抗体" 是指非抗原结合区域的氨基酸序列被替换变得与人抗体更 为相似, 但仍保留原始结合活性的抗体。  A "humanized antibody" refers to an antibody in which the amino acid sequence of a non-antigen binding region is replaced to become more similar to a human antibody, but still retains the original binding activity.
"分离的" 一词指将物质从它原来的环境 (例如, 若是自然产生的就指其 天然环境) 之中移出。 比如说, 一个自然产生的多核苷酸或多肽存在于活动物 中就是没有被分离出来, 但同样的多核苷酸或多肽同一些或全部在自然系统中 与之共存的物质分开就是分离的。 这样的多核苷酸可能是某一载体的一部分, 也可能这样的多核苷酸或多肽是某一组合物的一部分。 既然载体或组合物不是 它天然环境的成分, 它们仍然是分离的。 The term "isolated" refers to the removal of a substance from its original environment (for example, its natural environment if it occurs naturally). For example, a naturally occurring polynucleotide or polypeptide is not isolated when it is present in a living animal, but the same polynucleotide or polypeptide is in the same or all of the natural systems. Separation of matter that coexists with it is separation. Such a polynucleotide may be part of a certain vector, or such a polynucleotide or polypeptide may be part of a certain composition. Since the carrier or composition is not a component of its natural environment, they are still isolated.
如本发明所用, "分离的" 是指物质从其原始环境中分离出来 (如果是天 然的物质, 原始环境即是天然环境) 。 如活体细胞内的天然状态下的多聚核苷 酸和多肽是没有分离纯化的, 但同样的多聚核苷酸或多肽如从天然状态中同存 在的其他物质中分开, 则为分离纯化的。  As used herein, "isolated" refers to the separation of a substance from its original environment (if it is a natural substance, the original environment is the natural environment). For example, polynucleotides and polypeptides in a natural state in a living cell are not isolated and purified, but the same polynucleotides or polypeptides are separated and purified if they are separated from other substances in the natural state .
如本文所用, "分离的人成束和延伸蛋白 16. 61 " 是指人成束和延伸蛋白 16. 61 基本上不含天然与其相关的其它蛋白、 脂类、 糖类或其它物质。 本领域 的技术人员能用标准的蛋白质纯化技术纯化人成束和延伸蛋白 16. 61。 基本上 纯的多肽在非还原聚丙烯酰胺凝胶上能产生单一的主带。 人成束和延伸蛋白 16. 61多肽的纯度能用氨基酸序列分析。  As used herein, "isolated human bundling and elongating protein 16.61" refers to human bundling and elongating protein 16.61 that is substantially free of other proteins, lipids, carbohydrates, or other substances with which it is naturally associated. Those skilled in the art can purify human bundling and elongation proteins using standard protein purification techniques 16.61. Substantially pure peptides can produce a single main band on a non-reducing polyacrylamide gel. Human bundling and elongation protein 16.61 The purity of the polypeptide can be analyzed by amino acid sequence.
本发明提供了一种新的多肽一一人成束和延伸蛋白 16. 61 , 其基本上是由 SEQ ID NO: 2所示的氨基酸序列组成的。 本发明的多肽可以是重组多肽、 天然多肽、 合 成多肽, 优选重组多肽。 本发明的多肽可以是天然纯化的产物, 或是化学合成的 产物, 或使用重组技术从原核或真核宿主 (例如, 细菌、 酵母、 高等植物、 昆虫和 哺乳动物细胞)中产生。 根据重组生产方案所用的宿主, 本发明的多肽可以是糖基 化的, 或可以是非糖基化的。 本发明的多肽还可包括或不包括起始的甲硫氨酸残 基。  The present invention provides a novel polypeptide one-to-one bundling and elongation protein 16.61, which basically consists of the amino acid sequence shown in SEQ ID NO: 2. The polypeptide of the present invention may be a recombinant polypeptide, a natural polypeptide, or a synthetic polypeptide, and preferably a recombinant polypeptide. The polypeptides of the present invention can be naturally purified products or chemically synthesized products, or can be produced from prokaryotic or eukaryotic hosts (eg, bacteria, yeast, higher plants, insects, and mammalian cells) using recombinant techniques. Depending on the host used in the recombinant production protocol, the polypeptide of the invention may be glycosylated, or it may be non-glycosylated. Polypeptides of the invention may also include or exclude initial methionine residues.
本发明还包括人成束和延伸蛋白 16. 61 的片段、 衍生物和类似物。 如本发 明所用, 术语 "片段" 、 "衍生物" 和 "类似物" 是指基本上保持本发明的人 成束和延伸蛋白 16. 61 相同的生物学功能或活性的多肽。 本发明多肽的片段、 衍生物或类似物可以是: ( I ) 这样一种, 其中一个或多个氨基酸残基被保守 或非保守氨基酸残基 (优选的是保守氨基酸残基) 取代, 并且取代的氨基酸可 以是也可以不是由遗传密码子编码的; 或者 ( I I ) 这样一种, 其中一个或多个 氨基酸残基上的某个基团被其它基团取代包含取代基; 或者 ( I I I ) 这样一种, 其中成熟多肽与另一种化合物 (比如延长多肽半衰期的化合物, 例如聚乙二醇) 融合; 或者 ( IV ) 这样一种, 其中附加的氨基酸序列融合进成熟多肽而形成的 多肽序列 (如前导序列或分泌序列或用来纯化此多肽的序列或蛋白原序列) 通 过本文的阐述, 这样的片段、 衍生物和类似物被认为在本领域技术人员的知识 范围之内。  The invention also includes fragments, derivatives and analogs of human bundling and elongating protein 16.61. As used in the present invention, the terms "fragment", "derivative" and "analog" refer to a polypeptide that substantially retains the same biological function or activity of the human bundled and extended proteins 16.61 of the present invention. A fragment, derivative or analog of the polypeptide of the present invention may be: (I) a kind in which one or more amino acid residues are substituted with conservative or non-conservative amino acid residues (preferably conservative amino acid residues), and the substitution The amino acid may or may not be encoded by the genetic code; or (II) such a type in which a group on one or more amino acid residues is substituted by other groups to include a substituent; or (III) such A type in which a mature polypeptide is fused to another compound (such as a compound that extends the half-life of a polypeptide, such as polyethylene glycol); or (IV) a type of polypeptide sequence in which an additional amino acid sequence is fused into a mature polypeptide ( Such as the leader sequence or secreted sequence or the sequence used to purify this polypeptide or protease sequence) As explained herein, such fragments, derivatives and analogs are considered to be within the knowledge of those skilled in the art.
本发明提供了分离的核酸 (多核苷酸) , 基本由编码具有 SEQ ID NO: 2 氨 基酸序列的多肽的多核苷酸组成。 本发明的多核苷酸序列包括 SEQ ID N0: 1 的 核苷酸序列。 本发明的多核苷酸是从人胎脑组织的 cDNA 文库中发现的。 它包 含的多核苷酸序列全长为 1721个碱基, 其开放读框 701-1 156编码了 151个氨 基酸。 根据基因芯片表达谱比较发现, 此多肽与人 FEZ1 蛋白有相似的表达谱, 可推断出该人成束和延伸蛋白 16. 61具有人 FEZ1蛋白相似的功能。 The present invention provides an isolated nucleic acid (polynucleotide), which basically consists of an amino acid encoding SEQ ID NO: 2 Polynucleotide composition of a polypeptide of the amino acid sequence. The polynucleotide sequence of the present invention includes the nucleotide sequence of SEQ ID NO: 1. The polynucleotide of the present invention is found from a cDNA library of human fetal brain tissue. It contains a polynucleotide sequence with a total length of 1721 bases, and its open reading frame 701-1 156 encodes 151 amino acids. According to the comparison of gene chip expression profiles, it was found that this polypeptide has a similar expression profile with human FEZ1 protein, and it can be inferred that the human bundle and elongation protein 16.61 have similar functions to human FEZ1 protein.
本发明的多核苷酸可以是 DM形式或是 RNA形式。 DM形式包括 cDNA、 基 因组 DNA或人工合成的 DNA。 MA可以是单链的或是双链的。 DM可以是编码链 或非编码链。 编码成熟多肽的编码区序列可以与 SEQ ID NO: 1 所示的编码区序 列相同或者是简并的变异体。 如本发明所用, "简并的变异体" 在本发明中是 指编码具有 SEQ ID NO: 2 的蛋白质或多肽, 但与 SEQ ID NO: 1所示的编码区序 列有差别的核酸序列。  The polynucleotide of the present invention may be in the form of DM or RNA. DM forms include cDNA, genomic DNA, or synthetic DNA. MA can be single-stranded or double-stranded. DM can be a coding chain or a non-coding chain. The coding region sequence encoding a mature polypeptide may be the same as the coding region sequence shown in SEQ ID NO: 1 or a degenerate variant. As used herein, a "degenerate variant" refers to a nucleic acid sequence encoding a protein or polypeptide having SEQ ID NO: 2 but having a sequence different from the coding region sequence shown in SEQ ID NO: 1 in the present invention.
编码 SEQ ID NO: 2的成熟多肽的多核苷酸包括: 只有成熟多肽的编码序列; 成熟多肽的编码序列和各种附加编码序列; 成熟多肽的编码序列 (和任选的附 加编码序列) 以及非编码序列。  The polynucleotide encoding the mature polypeptide of SEQ ID NO: 2 includes: only the coding sequence of the mature polypeptide; the coding sequence of the mature polypeptide and various additional coding sequences; the coding sequence of the mature polypeptide (and optional additional coding sequences); Coding sequence.
术语 "编码多肽的多核苷酸" 是指包括编码此多肽的多核苷酸和包括附加 编码和 /或非编码序列的多核苷酸。  The term "polynucleotide encoding a polypeptide" refers to a polynucleotide comprising the polypeptide and a polynucleotide comprising additional coding and / or non-coding sequences.
本发明还涉及上述描述多核苷酸的变异体, 其编码与本发明有相同的氨基 酸序列的多肽或多肽的片断、 类似物和衍生物。 此多核苷酸的变异体可以是天 然发生的等位变异体或非天然发生的变异体。 这些核苷酸变异体包括取代变异 体、 缺失变异体和插入变异体。 如本领域所知的, 等位变异体是一个多核苷酸 的替换形式, 它可能是一个或多个核苷酸的取代、 缺失或插入, 但不会从实质 上改变其编码的多肽的功能。  The invention also relates to variants of the polynucleotides described above, which encode polypeptides or fragments, analogs and derivatives of polypeptides having the same amino acid sequence as the invention. Variants of this polynucleotide can be naturally occurring allelic variants or non-naturally occurring variants. These nucleotide variants include substitution variants, deletion variants, and insertion variants. As known in the art, an allelic variant is an alternative form of a polynucleotide that may be a substitution, deletion, or insertion of one or more nucleotides, but does not substantially change the function of the polypeptide it encodes .
本发明还涉及与以上所描述的序列杂交的多核苷酸 (两个序列之间具有至 少 50%, 优选具有 70%的相同性) 。 本发明特别涉及在严格条件下与本发明所 述多核苷酸可杂交的多核苷酸。 在本发明中, "严格条件" 是指: (1)在较低 离子强度和较高温度下的杂交和洗脱, 如 0. 2xSSC, 0. 1%SDS, 60 °C ;或(2)杂交 时加用变性剂, 如 50% (v/v)甲酰胺, 0. 1%小牛血清 / 0. l i co l l , 42 °C等; 或(3) 仅在两条序列之间的相同性至少在 95%以上,更好是 97%以上时才发生杂交。 并 且, 可杂交的多核苷酸编码的多肽与 SEQ ID NO : 2 所示的成熟多肽有相同的 生物学功能和活性。  The invention also relates to a polynucleotide that hybridizes to the sequence described above (having at least 50%, preferably 70% identity, between the two sequences). The present invention particularly relates to polynucleotides that can hybridize to the polynucleotides of the present invention under stringent conditions. In the present invention, "strict conditions" means: (1) hybridization and elution at lower ionic strength and higher temperature, such as 0.2xSSC, 0.1% SDS, 60 ° C; or (2) Add a denaturant during hybridization, such as 50% (v / v) formamide, 0.1% calf serum / 0.1 li co ll, 42 ° C, etc .; or (3) the same only between the two sequences Crosses occur only when the sex is at least 95%, and more preferably 97%. In addition, the polypeptide encoded by the hybridizable polynucleotide has the same biological function and activity as the mature polypeptide shown in SEQ ID NO: 2.
本发明还涉及与以上所描述的序列杂交的核酸片段。 如本发明所用, "核 酸片段"的长度至少含 10个核苷酸, 较好是至少 20- 30个核苷酸, 更好是至少 50-60 个核苷酸, 最好是至少 100 个核苷酸以上。 核酸片段也可用于核酸的扩 增技术(如 PCR)以确定和 /或分离编码人成束和延伸蛋白 16.61的多核苷酸。 The invention also relates to nucleic acid fragments that hybridize to the sequences described above. As used in the present invention, a "nucleic acid fragment" contains at least 10 nucleotides in length, preferably at least 20-30 nucleotides, more preferably at least 50-60 nucleotides, preferably at least 100 nucleotides. Nucleic acid fragments can also be used in nucleic acid amplification techniques, such as PCR, to identify and / or isolate polynucleotides encoding human bundling and elongation protein 16.61.
本发明中的多肽和多核苷酸优选以分离的形式提供, 更佳地被纯化至均质。 本发明的编码人成束和延伸蛋白 16.61 的特异的多核苷酸序列能用多种方 法获得。 例如, 用本领域熟知的杂交技术分离多核苷酸。 这些技术包括但不局 限于: 1)用探针与基因组或 cDNA 文库杂交以检出同源的多核苷酸序列, 和 2) 表达文库的抗体筛选以检出具有共同结构特征的克隆的多核苷酸片段。  The polypeptides and polynucleotides in the present invention are preferably provided in an isolated form and are more preferably purified to homogeneity. The specific polynucleotide sequence of the present invention encoding human bundling and elongating protein 16.61 can be obtained by a variety of methods. For example, polynucleotides are isolated using hybridization techniques well known in the art. These techniques include, but are not limited to: 1) hybridization of probes to genomic or cDNA libraries to detect homologous polynucleotide sequences, and 2) antibody screening of expression libraries to detect cloned polynucleosides with common structural characteristics Acid fragments.
本发明的 DNA片段序列也能用下列方法获得: 1)从基因组 DM分离双链 DNA 序列; 2)化学合成 DNA序列以获得所述多肽的双链 DNA。  The DNA fragment sequence of the present invention can also be obtained by the following methods: 1) separating the double-stranded DNA sequence from the DM of the genome; 2) chemically synthesizing the DNA sequence to obtain the double-stranded DNA of the polypeptide.
上述提到的方法中, 分离基因组 DNA 最不常用。 DM 序列的直接化学合成 是经常选用的方法。 更经常选用的方法是 cDNA序列的分离。 分离感兴趣的 cDM 的标准方法是从高表达该基因的供体细胞分离 mRNA并进行逆转录, 形成质粒或 噬菌体 cDNA 文库。 提取 mRM 的方法已有多种成熟的技术, 试剂盒也可从商业 途径获得(Qiagene)。 而构建 cDNA 文库也是通常的方法(Sarabrook, et al. , Molecular Cloning, A Laboratory Manual, Cold Spring Harbor Laboratory. New York, 1989)。还可得到商业供应的 cDNA文库,如 Clontech公司的不同 cDNA 文库。 当结合使用聚合酶反应技术时, 即使极少的表达产物也能克隆。  Of the methods mentioned above, genomic DNA isolation is the least commonly used. Direct chemical synthesis of DM sequences is often the method of choice. The more commonly used method is the isolation of cDNA sequences. The standard method for isolating the cDM of interest is to isolate mRNA from donor cells that overexpress the gene and perform reverse transcription to form a plasmid or phage cDNA library. There are many proven techniques for extracting mRM, and kits are also commercially available (Qiagene). The construction of cDNA libraries is also a common method (Sarabrook, et al., Molecular Cloning, A Laboratory Manual, Cold Spring Harbor Laboratory. New York, 1989). Commercially available cDNA libraries are also available, such as different cDNA libraries from Clontech. When polymerase reaction technology is used in combination, even very small expression products can be cloned.
可用常规方法从这些 cDNA 文库中筛选本发明的基因。 这些方法包括(但不 限于): (l)DNA- DNA 或 DNA- RNA 杂交; (2)标志基因功能的出现或丧失; (3)测 定人成束和延伸蛋白 16.61 的转录本的水平; (4)通过免疫学技术或测定生物学 活性, 来检测基因表达的蛋白产物。 上述方法可单用, 也可多种方法联合应用。  The genes of the present invention can be selected from these cDNA libraries by conventional methods. These methods include (but are not limited to): (l) DNA-DNA or DNA-RNA hybridization; (2) the presence or absence of marker gene functions; (3) determination of human bundled and elongated protein 16.61 transcript levels; ( 4) Detecting gene-expressed protein products by immunological techniques or by measuring biological activity. The above methods can be used singly or in combination.
在第(1)种方法中, 杂交所用的探针是与本发明的多核苷酸的任何一部分同 源, 其长度至少 10个核苷酸, 较好是至少 30个核苷酸, 更好是至少 50个核苷 酸, 最好是至少 100个核苷酸。 此外, 探针的长度通常在 2000个核苷酸之内, 较佳的为 1000个核苷酸之内。 此处所用的探针通常是在本发明的基因序列信息 的基础上化学合成的 DNA序列。 本发明的基因本身或者片段当然可以用作探针。 DNA探针的标记可用放射性同位素, 荧光素或酶(如碱性磷酸酶)等。  In the method (1), the probe used for hybridization is homologous to any part of the polynucleotide of the present invention, and its length is at least 10 nucleotides, preferably at least 30 nucleotides, more preferably At least 50 nucleotides, preferably at least 100 nucleotides. In addition, the length of the probe is usually within 2000 nucleotides, preferably within 1000 nucleotides. The probe used here is generally a DNA sequence chemically synthesized based on the gene sequence information of the present invention. The genes or fragments of the present invention can of course be used as probes. DNA probes can be labeled with radioisotopes, luciferin, or enzymes (such as alkaline phosphatase).
在第(4)种方法中, 检测人成束和延伸蛋 '白 16.61基因表达的蛋白产物可用 免疫学技术如 Western印迹法, 放射免疫沉淀法, 酶联免疫吸附法(ELISA)等。  In the method (4), the protein product of 16.61 gene expression in human bundled and extended protein 'white can be detected by immunological techniques such as Western blotting, radioimmunoprecipitation, and enzyme-linked immunosorbent assay (ELISA).
应 用 PCR 技术 扩增 DNA/RNA 的 方 法 (Saiki, et al. Science Methods for Amplifying DNA / RNA Using PCR Techniques (Saiki, et al. Science
1985; 230: 1350-1354)被优选用于获得本发明的基因。 特别是很难从文库中得到 全长的 cDNA 时, 可优选使用 RACE法(RACE - cDNA末端快速扩增法), 用于 PCR 的引物可根据本文所公开的本发明的多核苷酸序列信息适当地选择, 并可用常 规方法合成。 可用常规方法如通过凝胶电泳分离和纯化扩增的 DM/RNA片段。 1985; 230: 1350-1354) are preferred for obtaining the genes of the invention. In particular, when it is difficult to obtain a full-length cDNA from a library, the RACE method (RACE-rapid amplification of cDNA ends) can be preferably used for PCR. The primers can be appropriately selected based on the polynucleotide sequence information of the present invention disclosed herein, and can be synthesized by conventional methods. The amplified DM / RNA fragment can be isolated and purified by conventional methods such as by gel electrophoresis.
如上所述得到的本发明的基因, 或者各种 DM 片段等的多核苷酸序列可用 常规方法如双脱氧链终止法(Sanger et a l . PNAS , 1977 , 74 : 5463- 5467)测定。 这类多核苷酸序列测定也可用商业测序试剂盒等。为了获得全长的 cDNA序列, 测 序需反复进行。 有时需要测定多个克隆的 cDNA 序列, 才能拼接成全长的 cDNA 序列。  The polynucleotide sequence of the gene of the present invention or various DM fragments and the like obtained as described above can be determined by a conventional method such as dideoxy chain termination (Sanger et al. PNAS, 1977, 74: 5463-5467). Such polynucleotide sequences can also be determined using commercial sequencing kits and the like. In order to obtain the full-length cDNA sequence, the sequencing must be repeated. Sometimes it is necessary to determine the cDNA sequence of multiple clones in order to splice into a full-length cDNA sequence.
本发明也涉及包含本发明的多核苷酸的载体, 以及用本发明的载体或直接 用人成束和延伸蛋白 16. 61 编码序列经基因工程产生的宿主细胞, 以及经重组 技术产生本发明所述多肽的方法。  The present invention also relates to a vector comprising the polynucleotide of the present invention, and a host cell genetically engineered using the vector of the present invention or directly using human bunching and elongation 16.61 coding sequence, and the recombinant technology to produce the present invention Polypeptide method.
本发明中, 编码人成束和延伸蛋白 16. 61的多核苷酸序列可插入到载体中, 以构成含有本发明所述多核苷酸的重组载体。 术语 "载体" 指本领域熟知的细 菌质粒、 噬菌体、 酵母质粒、 植物细胞病毒、 哺乳动物细胞病毒如腺病毒、 逆 转录病毒或其它载体。 在本发明中适用的载体包括但不限于: 在细菌中表达的 基于 T7启动子的表达载体(Rosenberg, et a l . Gene, 1987, 56: 125); 在哺乳 动物细胞中表达的 pMSXND 表达载体(Lee and Na thans , J Bi o Chem. 263: 3521 , 1988)和在昆虫细胞中表达的来源于杆状病毒的载体。 总之, 只要能 在宿主体内复制和稳定, 任何质粒和载体都可以用于构建重组表达载体。 表达 载体的一个重要特征是通常含有复制起始点、 启动子、 标记基因和翻译调控元 件。  In the present invention, a polynucleotide sequence encoding human bundling and elongating protein 16.61 can be inserted into a vector to constitute a recombinant vector containing the polynucleotide of the present invention. The term "vector" refers to bacterial plasmids, phages, yeast plasmids, plant cell viruses, mammalian cell viruses such as adenoviruses, retroviruses or other vectors well known in the art. Vectors suitable for use in the present invention include, but are not limited to: T7 promoter-based expression vectors (Rosenberg, et al. Gene, 1987, 56: 125) expressed in bacteria; pMSXND expression vectors expressed in mammalian cells ( Lee and Na thans, J Bio Chem. 263: 3521, 1988) and baculovirus-derived vectors expressed in insect cells. In short, as long as it can be replicated and stabilized in the host, any plasmid and vector can be used to construct a recombinant expression vector. An important feature of expression vectors is that they usually contain an origin of replication, a promoter, a marker gene, and translational regulatory elements.
本领域的技术人员熟知的方法能用于构建含编码人成束和延伸蛋白 16. 61 的 DNA序列和合适的转录 /翻译调控元件的表达载体。这些方法包括体外重组 DNA 技术、 DNA合成技术、 体内重组技术等(Sarabroook, et a l. Mo l ecu lar C l oning, a Labora tory Manua l , co ld Spr ing Harbor Labora tory. New York, 1989)。 所述的 DNA序列可有效连接到表达载体中的适当启动子上, 以指导 mRNA合成。 这些启动子的代表性例子有: 大肠杆菌的 l ac或 t rp启动子; λ噬菌体的 PL启 动子; 真核启动子包括 CMV 立即早期启动子、 HSV 胸苷激酶启动子、 早期和晚 期 SV40启动子、 反转录病毒的 LTRs 和其它一些已知的可控制基因在原核细胞 或真核细胞或其病毒中表达的启动子。 表达载体还包括翻译起始用的核糖体结 合位点和转录终止子等。 在载体中插入增强子序列将会使其在高等真核细胞中 的转录得到增强。 增强子是 DM表达的顺式作用因子, 通常大约有 10到 300个 碱基对, 作用于启动子以增强基因的转录。 可举的例子包括在复制起始点晚期 一侧的 100到 270个碱基对的 SV40增强子、 在复制起始点晚期一侧的多瘤增强 子以及腺病毒增强子等。 Methods well known to those skilled in the art can be used to construct expression vectors containing a DNA sequence encoding human bunching and elongation protein 16.61 and suitable transcription / translation regulatory elements. These methods include in vitro recombinant DNA technology, DNA synthesis technology, and in vivo recombination technology (Sarabroook, et al. Mo l ecu lar Cloning, a Labora tory Manua l, co ld Spr ing Harbor Labora tory. New York, 1989) . The DNA sequence can be operably linked to an appropriate promoter in an expression vector to guide mRNA synthesis. Representative examples of these promoters are: the l ac or trp promoter of E. coli; the PL promoter of lambda phage; eukaryotic promoters include the CMV immediate early promoter, the HSV thymidine kinase promoter, and the early and late SV40 promoters Promoters, retroviral LTRs, and other known promoters that control the expression of genes in prokaryotic or eukaryotic cells or their viruses. The expression vector also includes a ribosome binding site and a transcription terminator for translation initiation. Insertion of enhancer sequences into the vector will enhance its transcription in higher eukaryotic cells. Enhancers are cis-acting factors expressed by DM, usually about 10 to 300 base pairs, which act on promoters to enhance gene transcription. Illustrative examples include late initiation of replication SV40 enhancer with 100 to 270 base pairs on one side, polyoma enhancer and adenovirus enhancer on the late side of the origin of replication, and the like.
此外, 表达载体优选地包含一个或多个选择性标记基因, 以提供用于选择 转化的宿主细胞的表型性状, 如真核细胞培养用的二氢叶酸还原酶、 新霉素抗 性以及绿色荧光蛋白(GFP) , 或用于大肠杆菌的四环素或氨苄青霉素抗性等。  In addition, the expression vector preferably contains one or more selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as dihydrofolate reductase, neomycin resistance, and green for eukaryotic cell culture. Fluorescent protein (GFP), or tetracycline or ampicillin resistance for E. coli.
本领域一般技术人员都清楚如何选择适当的载体 /转录调控元件 (如启动 子、 增强子等) 和选择性标记基因。  Those of ordinary skill in the art will know how to select appropriate vector / transcription control elements (such as promoters, enhancers, etc.) and selectable marker genes.
本发明中, 编码人成束和延伸蛋白 16. 61 的多核苷酸或含有该多核苷酸的 重组载体可转化或转导入宿主细胞, 以构成含有该多核苷酸或重组载体的基因 工程化宿主细胞。 术语 "宿主细胞" 指原核细胞, 如细菌细胞; 或是低等真核 细胞, 如酵母细胞; 或是高等真核细胞, 如哺乳动物细胞。 代表性例子有: 大 肠杆菌, 链霉菌属; 细菌细胞如鼠伤寒沙门氏菌; 真菌细胞如酵母; 植物细胞; 昆虫细胞如果蝇 S2或 Sf 9 ; 动物细胞如 CH0、 COS或 Bowes黑素瘤细胞等。  In the present invention, a polynucleotide encoding human bundling and elongating protein 16.61 or a recombinant vector containing the polynucleotide can be transformed or transduced into a host cell to form a genetically engineered host containing the polynucleotide or the recombinant vector. cell. The term "host cell" refers to a prokaryotic cell, such as a bacterial cell; or a lower eukaryotic cell, such as a yeast cell; or a higher eukaryotic cell, such as a mammalian cell. Representative examples are: E. coli, Streptomyces; bacterial cells such as Salmonella typhimurium; fungal cells such as yeast; plant cells; insect cells such as fly S2 or Sf 9; animal cells such as CH0, COS or Bowes melanoma cells.
用本发明所述的 DM序列或含有所述 DNA序列的重组载体转化宿主细胞可 用本领域技术人员熟知的常规技术进行。 当宿主为原核生物如大肠杆菌时, 能 吸收 DNA 的感受态细胞可在指数生长期后收获, 用 CaC l^ 处理, 所用的步骤 在本领域众所周知。 可供选择的是用 MgCl2。 如果需要, 转化也可用电穿孔的方 法进行。 当宿主是真核生物, 可选用如下的 DNA 转染方法: 磷酸钙共沉淀法, 或者常规机械方法如显微注射、 电穿孔、 脂质体包装等。 Transformation of a host cell with a DM sequence according to the present invention or a recombinant vector containing the DNA sequence can be performed by conventional techniques well known to those skilled in the art. When the host is a prokaryote such as E. coli, competent cells capable of absorbing DNA can be harvested after the exponential growth phase and treated with CaCl, the steps used are well known in the art. Alternatively, MgCl 2 is used. If necessary, transformation can also be performed by electroporation. When the host is a eukaryotic organism, the following DNA transfection methods can be used: calcium phosphate co-precipitation method, or conventional mechanical methods such as microinjection, electroporation, and liposome packaging.
通过常规的重组 DNA 技术, 利用本发明的多核苷酸序列可用来表达或生产 重组的人成束和延伸蛋白 16. 61 (Sc i ence , 1984 ; 224: 1431)。 一般来说有以 下步骤:  By conventional recombinant DNA technology, the polynucleotide sequence of the present invention can be used to express or produce recombinant human bundling and elongating protein 16.61 (Scence, 1984; 224: 1431). Generally there are the following steps:
(1) .用本发明的编码人 人成束和延伸蛋白 16. 61的多核苷酸 (或变异体), 或用含有该多核苷酸的重组表达载体转化或转导合适的宿主细胞;  (1) using the polynucleotide (or variant) encoding the human-human bunching and elongation protein 16.61 of the present invention, or transforming or transducing a suitable host cell with a recombinant expression vector containing the polynucleotide;
(2) .在合适的培养基中培养宿主细胞;  (2) culturing host cells in a suitable medium;
(3) .从培养基或细胞中分离、 纯化蛋白质。  (3) Isolate and purify protein from culture medium or cells.
在步骤 ( 2 ) 中, 根据所用的宿主细胞, 培养中所用的培养基可选自各种 常规培养基。 在适于宿主细胞生长的条件下进行培养。 当宿主细胞生长到适当 的细胞密度后, 用合适的方法(如温度转换或化学诱导)诱导选择的启动子, 将 细胞再培养一段时间。  In step (2), depending on the host cell used, the medium used in the culture may be selected from various conventional mediums. Culture is performed under conditions suitable for host cell growth. After the host cells have grown to an appropriate cell density, the selected promoter is induced by a suitable method (such as temperature conversion or chemical induction), and the cells are cultured for a period of time.
在步骤 ( 3 ) 中, 重组多肽可包被于细胞内、 或在细胞膜上表达、 或分泌到 细胞外。 如果需要, 可利用其物理的、 化学的和其它特性通过各种分离方法分 离和纯化重组的蛋白。 这些方法是本领域技术人员所熟知的。 这些方法包括但 并不限于: 常规的复性处理、 蛋白沉淀剂处理(盐析方法)、 离心、 渗透破菌、 超声波处理、 超离心、 分子筛层析(凝胶过滤)、 吸附层析、 离子交换层析、 高 效液相层析(HPLC)和其它各种液相层析技术及这些方法的结合。 附图的简要说明 In step (3), the recombinant polypeptide may be coated in a cell, expressed on a cell membrane, or secreted outside the cell. If necessary, it can be separated by various separation methods using its physical, chemical and other properties. Isolate and purify the recombinant protein. These methods are well known to those skilled in the art. These methods include, but are not limited to: conventional renaturation treatment, protein precipitant treatment (salting out method), centrifugation, osmotic disruption, ultrasonic treatment, ultracentrifugation, molecular sieve chromatography (gel filtration), adsorption chromatography, ion Exchange chromatography, high performance liquid chromatography (HPLC) and various other liquid chromatography techniques and combinations of these methods. Brief description of the drawings
下列附图用于说明本发明的具体实施方案, 而不用于限定由权利要求书所 界定的本发明范围。  The following drawings are used to illustrate specific embodiments of the invention, but not to limit the scope of the invention as defined by the claims.
图 1是本发明人成束和延伸蛋白 16. 61和人 FEZ1蛋白的基因芯片表达谱比较 图。 上图是人成束和延伸蛋白 16. 61的表达谱折方图, 下图是人 FEZ1蛋白的表达谱 折方图。 其中, 1-胎脑、 2-膀胱粘膜、 3-PMA+的 Ecv304细胞株、 4- LPS+的 Ecv304 细胞株胸腺、 5-正常成纤维细胞 1024NC、 6- Fibroblas t , 生长因子刺激, 1024NT, 7-疤痕成 fc生长因子刺激, 1013HT、 8-疤痕成 fc未用生长因子刺激, 1013HC、 9- 膀胱癌建株细胞 EJ、 10-膀胱癌旁、 11-膀胱癌、 12-肝癌、 13-肝癌细胞株、 14-胎 皮、 15-脾脏、 16 -前列腺癌、 17 -空肠腺癌、 18贲门癌。  FIG. 1 is a comparison diagram of gene chip expression profiles of the inventor bundled and extended protein 16.61 and human FEZ1 protein. The upper graph is a graph of the expression profile of human bundling and elongation protein 16.61, and the lower graph is the graph of the expression profile of human FEZ1 protein. Among them, 1-fetal brain, 2-bladder mucosa, 3-PMA + Ecv304 cell line, 4-LPS + Ecv304 cell line thymus, 5-normal fibroblasts 1024NC, 6- Fibroblas t, growth factor stimulation, 1024NT, 7- Stimulation of scar into fc growth factor, 1013HT, 8-scar into fc without stimulation with growth factor, 1013HC, 9-bladder cancer cell EJ, 10-bladder cancer, 11-bladder cancer, 12-liver cancer, 13-liver cancer cells Strains, 14-fetal skin, 15-spleen, 16-prostate cancer, 17-jejunum adenocarcinoma, 18 cardia cancer.
图 2为分离的人成束和延伸蛋白 16. 61的聚丙烯酰胺凝胶电泳图(SDS- PAGE ) 。  Figure 2 shows the polyacrylamide gel electrophoresis (SDS-PAGE) of the isolated human bundling and elongating protein 16.61.
17kDa为蛋白质的分子量。 箭头所指为分离出的蛋白条带。 实现本发明的最佳方式 17kDa is the molecular weight of the protein. The arrow indicates the isolated protein band. The best way to implement the invention
下面结合具体实施例, 进一步阐述本发明。 应理解, 这些实施例仅用于说 明本发明而不用于限制本发明的范围。 下列实施例中未注明具体条件的实验方 法,通常按照常规条件如 Sambrook等人, 分子克隆:实验室手册(New York: Col d Spr ing Harbor Laboratory Pres s, 1989)中所述的条件, 或按照制造厂商所 建议的条件。  The present invention is further described below with reference to specific embodiments. It should be understood that these examples are only used to illustrate the present invention and not to limit the scope of the present invention. The experimental methods without specific conditions in the following examples are generally in accordance with the general conditions such as those described in Sambrook et al., Molecular Cloning: Laboratory Manual (New York: Cold Harbor Harbor Laboratory Pres s, 1989), or Follow the conditions recommended by the manufacturer.
实施例 1 : 人成束和延伸蛋白 16. 61的克隆  Example 1: Cloning of human bundling and elongin 16.61
用异硫氰酸胍 /酚 /氯仿一步法提取人胎脑总 RNA。 用 Quik mRNA Isolat ion Ki t ( Qiegene 公司产品) 从总 RNA中分离 poly (A) mRNA。 2ug poly (A) mRNA经逆转录 形成 cDNA。用 Smar t cDNA克隆试剂盒(购自 Clontech )将 cDNA片段定向插入到 pBSK (+) 载体 (Clontech公司产品)的多克隆位点上, 转化 DH5 α , 细菌形成 cDNA文库。 用 Dye terminate cycle react ion sequencing ki t (Perkin-Elmer公司产品) 和 ABI 377 自动测序仪 (Perkin- Elmer公司)测定所有克隆的 5'和 3'末端的序列。 将测定的 cDNA 序列与巳有的公共 DNA序列数据库 (Genebank ) 进行比较, 结果发现其中一个克隆 0311g07的 cDNA序列为新的 DNA。 通过合成一系列引物对该克隆所含的插入 cDNA片 段进行双向测定。 结果表明, 0311 g07克隆所含的全长 cDNA为 1721bp (如 Seq ID N0: l 所示) , 从第 701bp至 1156bp有一个 455bp的开放阅读框架 ( 0RF ) , 编码一个新 的蛋白质 (如 Seq ID NO: 2所示) 。 我们将此克隆命名为 pBS- 0311g07, 编码的蛋 白质命名为人成束和延伸蛋白 16. 61。 实施例 2: 用 RT- PCR方法克隆编码人成束和延伸蛋白 16. 61的基因 Total human fetal brain RNA was extracted by one-step method with guanidine isothiocyanate / phenol / chloroform. Poly (A) mRNA was isolated from total RNA using Quik mRNA Isolat ion Kit (product of Qiegene). 2ug poly (A) mRNA is reverse transcribed to form cDNA. The Smar t cDNA cloning kit (purchased from Clontech) was used to insert the cDNA fragments into the multiple cloning site of the pBSK (+) vector (Clontech) to transform DH5α. Dye terminate cycle react ion sequencing kit (Perkin-Elmer) and ABI 377 automatic sequencer (Perkin-Elmer) were used to determine the sequences at the 5 'and 3' ends of all clones. The determined cDNA sequence was compared with the public DNA sequence database (Genebank), and one of the clones was found. The 0311g07 cDNA sequence is new DNA. A series of primers were synthesized to determine the inserted cDNA fragments of the clone in both directions. The results showed that the 0311 g07 clone contained a full-length cDNA of 1721bp (as shown in Seq ID N0: l), and a 455bp open reading frame (0RF) from 701bp to 1156bp, encoding a new protein (such as Seq ID NO: 2). We named this clone pBS-0311g07 and the encoded protein was named human bundling and elongation protein 16.61. Example 2: Cloning of a gene encoding human bundling and elongation protein 16.61 by RT-PCR
用胎脑细胞总 RNA为模板,以 ol igo- dT为引物进行逆转录反应合成 cDNA,用 CDNA was synthesized using fetal brain cell total RNA as a template and ol igo-dT as a primer for reverse transcription reaction.
Qiagene的试剂盒纯化后,用下列引物进行 PCR扩增: After purification of Qiagene's kit, PCR amplification was performed with the following primers:
Pr imer 1: 5,- CCCAACAATGTAACTGCTTGATAT — 3, (SEQ ID NO: 3)  Pr imer 1: 5,-CCCAACAATGTAACTGCTTGATAT — 3, (SEQ ID NO: 3)
Pr imer2: 5'- GGAAACAGGAGGATTTATTTAGAT -3' (SEQ ID NO: 4)  Pr imer2: 5'- GGAAACAGGAGGATTTATTTAGAT -3 '(SEQ ID NO: 4)
Pr imerl为位于 SEQ ID NO: 1的 5'端的第 lbp开始的正向序列;  Pr imerl is a forward sequence starting at the lbp at the 5 'end of SEQ ID NO: 1;
Pr imer2为 SEQ ID NO: 1的中的 3,端反向序列。 .  Pr imer2 is the 3, terminal reverse sequence of SEQ ID NO: 1. .
扩增反应的条件: 在 50 μ 1的反应体积中含有 50mmol /L KC 1 , 10mmol /L Tr i s- CI , (pH8. 5) , 1. 5ramol/L MgCl2, 200 μ rao l/L dNTP, l Opmol引物, 1U的 Taq DNA聚合 酶(Clontech公司产品)。 在 PE9600型 DM热循环仪(Perkin- Elmer公司)上按下列条 件反应 25个周期: 94°C 30sec; 55°C 30sec; 72。C 2min。 在 RT- PCR时同时设 β -act in 为阳性对照和模板空白为阴性对照。 扩增产物用 QIAGEN公司的试剂盒纯化, 用 TA 克隆试剂盒连接到 pCR载体上 (Invi trogen公司产品) 。 DNA序列分析结果表明 PCR 产物的 DNA序列与 SEQ ID NO: 1所示的 1- 1721bp完全相同。 实施例 3: Nor thern 印迹法分析人成束和延伸蛋白 16. 61基因的表达: Amplification reaction conditions: 50 mmol / L KC 1, 10 mmol / L Tris-CI, (pH 8.5.5), 1.5 ramol / L MgCl 2 , 200 μ rao l / L in a reaction volume of 50 μ 1 dNTP, l Opmol primer, 1U Taq DNA polymerase (Clontech). The reaction was performed on a PE9600 DM thermal cycler (Perkin-Elmer) for 25 cycles under the following conditions: 94 ° C 30sec; 55 ° C 30sec; 72. C 2min. During RT-PCR, set β-act in as a positive control and template blank as a negative control. The amplified product was purified using a QIAGEN kit and ligated to a pCR vector (Invitrogen) using a TA cloning kit. DNA sequence analysis results showed that the DNA sequence of the PCR product was exactly the same as the 1-1721bp shown in SEQ ID NO: 1. Example 3: Nor thern blot analysis of human bundling and elongation 16.61 gene expression:
用一步法提取总 RNA [Ana l. Bi ochem 1987, 162, 156-159]。 该法包括酸性硫 氰酸胍苯酚 -氯仿抽提。 即用 4M异硫氰酸胍- 25raM柠檬酸钠, 0. 2M乙酸钠 ( pH4. 0 ) 对组织进行匀浆, 加入 1倍体积的苯酚和 1/5体积的氯仿-异戊醇 (49 : 1 ) , 混合 后离心。 吸出水相层, 加入异丙醇 (0. 8体积) 并将混合物离心得到 RNA沉淀。 将 得到的 RNA沉淀用 70%乙醇洗涤, 干燥并溶于水中。 用 20 g RNA, 在含 20mM 3- ( N- 吗啉代 ) 丙磺酸 ( H7. 0 ) - 5mM乙酸钠 -ImM EDTA-2. 2M甲醛的 1. 2%琼脂糖凝胶上进 行电泳。 然后转移至硝酸纤维素膜上。 用 cc -32P dATP通过随机引物法制备 32P-标记 的 DNA探针。 所用的 DNA探针为图 1所示的 PCR扩增的人成束和延伸蛋白 16. 61编码区 序列(701bp至 1156bp)。 将 32P-标记的探针 (约 2 χ 106cpm/ml ) 与转移了 RNA的硝酸 纤维素膜在一溶液中于 42°C杂交过夜, 该溶液包含 50%甲酰胺 - 25mM KH2P04 ( pH7. 4 ) - 5 x SSC- 5 x Denhardt's溶液和 200 g/ml鲑精 DNA。 杂交之后, 将滤膜在 1 x SSC - 0. 1°/。SDS中于 55°C洗 30min。 然后, 用 Phosphor Imager进行分析和定量。 实施例 4: 重组人成束和延伸蛋白 16. 61的体外表达、 分离和纯化 Total RNA was extracted in one step [Ana l. Bi ochem 1987, 162, 156-159]. This method involves acid guanidinium thiocyanate phenol-chloroform extraction. That is, the tissue is homogenized with 4M guanidine isothiocyanate-25raM sodium citrate, 0.2M sodium acetate (pH4.0), and 1 volume of phenol and 1/5 volume of chloroform-isoamyl alcohol (49: 1), centrifuge after mixing. Aspirate the aqueous layer, add isopropanol (0.8 vol) and centrifuge the mixture to obtain RNA precipitate. The resulting RNA pellet was washed with 70% ethanol, dried and dissolved in water. With 20 g of RNA, electrophoresis was performed on a 1.2% agarose gel containing 20 mM 3- (N-morpholino) propanesulfonic acid (H7. 0)-5 mM sodium acetate-ImM EDTA-2. 2M formaldehyde. It was then transferred to a nitrocellulose membrane. 32 P dATP Preparation 32 P- DNA probe labeled by the random primer Method - with cc. The DNA probe used was the PCR amplified human bundling and elongating protein 16.61 coding region sequence (701bp to 1156bp) shown in FIG. A 32P-labeled probe (about 2 x 10 6 cpm / ml) was hybridized with a nitrocellulose membrane to which RNA was transferred at 42 ° C overnight in a solution containing 50% formamide-25mM KH 2 P0 4 (pH7. 4) -5 x SSC- 5 x Denhardt's solution and 200 g / ml salmon sperm DNA. After hybridization, place the filter at 1 x SSC-0.1 ° /. Wash in SDS at 55 ° C for 30 min. Then, Phosphor Imager was used for analysis and quantification. Example 4: In vitro expression, isolation and purification of recombinant human bundling and elongation protein 16.61
根据 SEQ ID NO: 1和图 1所示的编码区序列, 设计出一对特异性扩增引物, 序 列如下:  Based on SEQ ID NO: 1 and the coding region sequence shown in Figure 1, a pair of specific amplification primers were designed, the sequence is as follows:
Pr imer3: 5'-CCCCATATGATGCTGAATTCGTCCTCAGGAAAC-3' ( Seq ID No: 5 ) Pr iraer4: 5 '-CATGGATCCTCATTGTAACCTCTGCCTCCCAGG-3 ' ( Seq ID No: 6 ) 此两段引物的 5'端分别含有 Ndel和 BamHI酶切位点, 其后分别为目的基因 5'端 和 3'端的编码序列, Ndel和 BamHI酶切位点相应于表达载体质粒 pET- 28b (+) (Novagen 公司产品, Cat. No. 69865. 3)上的选择性内切酶位点。 以含有全长目的基因的 pBS - 0311g07质粒为模板, 进行 PCR反应。 PCR反应条件为: 总体积 50 μ 1中含 pBS- 0311g07 质粒 10pg、 引物 Pr imer 3和 Pr imer- 4分另 'J为 l Opmol、 Advantage polymerase Mix ( Clontech公司产品) 1 μ 1。 循环参数: 94°C 20s, 60°C 30s, 68。C 2 min,共 25个 循环。 用 Ndel和 BamHI分别对扩增产物和质粒 pET- 28 (+)进行双酶切,分别回收大片 段,并用 T4连接酶连接。 连接产物转化用氯化钙法大肠杆细菌 DH5 a ,在含卡那霉素 (终浓度 30 g/ral ) 的 LB平板培养过夜后, 用菌落 PCR方法筛选阳性克隆, 并进行 测序。 挑选序列正确的阳性克隆(pET- 0311g07 )用氯化钙法将重组质粒转化大肠 杆菌 BL21 (DE3) plySs (Novagen公司产品)。 在含卡那霉素 (终浓度 30 g/ml ) 的 LB 液体培养基中, 宿主菌 BL21 ( pBT-0311g07 ) 在 37°C培养至对数生长期, 加入 IPTG 至终浓度 1瞧 ol/L, 继续培养 5小时。 离心收集菌体, 经超声波破菌,离心收集上清, 用能与 6个组氨酸 "Hi s- Tag ) 结合的亲和层析柱 Hi s. Bind Quick Cartridge ( Novagen公司产品)进行层析, 得到了纯化的目的蛋白人成束和延伸蛋白 16. 61。 经 SDS- PAGE电泳, 在 17kDa处得到一单一的条带 (图 2 ) 。 将该条带转移至 PVDF膜 上用 Edams水解法进行 N-端氨基酸序列分析, 结果 N-端 15个氨基酸与 SEQ ID NO: 2 所示的 N-端 15个氨基酸残基完全相同。 实施例 5 抗人成束和延伸蛋白 16. 61抗体的产生  Pr imer3: 5'-CCCCATATGATGCTGAATTCGTCCTCAGGAAAC-3 '(Seq ID No: 5) Pr iraer4: 5' -CATGGATCCTCATTGTAACCTCTGCCTCCCAGG-3 '(Seq ID No: 6) The 5' ends of these two primers contain Ndel and BamHI digestion sites, respectively Points, followed by the coding sequences of the 5 'and 3' ends of the gene of interest, respectively. The Ndel and BamHI restriction sites correspond to the expression vector plasmid pET-28b (+) (Novagen, Cat. No. 69865. 3) Selective endonuclease site. PCR was performed using the pBS-0311g07 plasmid containing the full-length target gene as a template. The PCR reaction conditions were as follows: a total volume of 50 μ1 containing pBS- 0311g07 plasmid 10 pg, primers Pr imer 3 and Pr imer- 4 points, and J was 1 Opmol, Advantage polymerase Mix (Clontech) 1 μ1. Cycle parameters: 94 ° C 20s, 60 ° C 30s, 68. C 2 min, a total of 25 cycles. Ndel and BamHI were used to double digest the amplified product and plasmid pET-28 (+), respectively, and large fragments were recovered and ligated with T4 ligase. The ligation product was transformed into coliform bacteria DH5a by the calcium chloride method, and cultured overnight in LB plates containing kanamycin (final concentration 30 g / ral). The positive clones were screened by colony PCR method and sequenced. A positive clone (pET-0311g07) with the correct sequence was selected, and the recombinant plasmid was transformed into E. coli BL21 (DE3) plySs (product of Novagen) using the calcium chloride method. In LB liquid medium containing kanamycin (final concentration 30 g / ml), the host bacteria BL21 (pBT-0311g07) was cultured at 37 ° C to the logarithmic growth phase, and IPTG was added to a final concentration of 1 ol / L. Continue to cultivate for 5 hours. The cells were collected by centrifugation, and the supernatant was collected by centrifugation. The supernatant was collected by centrifugation. Chromatography was performed using an affinity chromatography column His s. Bind Quick Cartridge (product of Novagen) capable of binding to 6 histidines "His-Tag". The purified human protein bundle and elongation protein 16.61 were obtained. After SDS-PAGE electrophoresis, a single band was obtained at 17 kDa (Figure 2). The band was transferred to a PVDF membrane using the Edams hydrolysis method. Analysis of the N-terminal amino acid sequence revealed that the 15 amino acids at the N-terminus were identical to the 15 amino acid residues at the N-terminus shown in SEQ ID NO: 2. Example 5 Anti-Human Bundle and Elongated Protein 16.61 Produce
用多肽合成仪(PE公司产品)合成下述人成束和延伸蛋白 16. 61特异性的多肽: NH2-Met-Leu-Asn-Ser-Ser-Ser-Gly-Asn-Leu-Leu-Lys-I le-Gln-I le-Ser- C00H (SEQ ID NO: 7)。 将该多肽分别与血蓝蛋白和牛血清白蛋白耦合形成复合, 方法参见: Avrameas, et a l. Immunochemi s try, 1969; 6: 43。 用 ½g上述 l蓝蛋白 多肽复合物加上完全弗氏佐剂免疫家兔, 15天后再用血蓝蛋白多肽复合物加不完 全弗氏佐剂加强免疫一次。 采用经 15 g/ml牛血清白蛋白多肽复合物包被的滴定 板做 ELISA测定兔血清中抗体的滴度。 用蛋白 A - Sepharose从抗体阳性的家兔血清 中分离总 IgG。将多肽结合于溴化氰活化的 Sepharose4B柱上,用亲和层析法从总 IgG 中分离抗多肽抗体。 免疫沉淀法证明纯化的抗体可特异性地与人成束和延伸蛋白 16. 61结合。 实施例 6: 本发明的多核苷酸片段用作杂交探针的应用 A peptide synthesizer (product of PE company) was used to synthesize the following 16.61-specific peptides: NH2-Met-Leu-Asn-Ser-Ser-Ser-Gly-Asn-Leu-Leu-Lys- I le-Gln-I le-Ser- C00H (SEQ ID NO: 7). The polypeptide is coupled to hemocyanin and bovine serum albumin to form a complex, respectively. For the method, see: Avrameas, et al. Immunochemi s try, 1969; 6: 43. With ½ g of cyanin Peptide complex plus complete Freund's adjuvant was used to immunize rabbits. After 15 days, hemocyanin peptide complex plus incomplete Freund's adjuvant was used to boost immunity once. A titer plate coated with a 15 g / ml bovine serum albumin peptide complex was used as an ELISA to determine antibody titers in rabbit serum. Protein A-Sepharose was used to isolate total IgG from antibody-positive rabbit sera. The peptide was bound to a cyanogen bromide-activated Sepharose4B column, and anti-peptide antibodies were separated from the total IgG by affinity chromatography. Immunoprecipitation demonstrated that the purified antibody could specifically bind to human bundling and elongating protein 16.61. Example 6: Application of the polynucleotide fragment of the present invention as a hybridization probe
从本发明的多核苷酸中挑选出合适的寡核苷酸片段用作杂交探针有多方面的 用途, 如用该探针可与不同来源的正常组织或病理组织的基因组或 cDNA文库杂交 以鉴定其是否含有本发明的多核苷酸序列和检出同源的多核苷酸序列,进一步还可 用该探针检测本发明的多核苷酸序列或其同源的多核苷酸序列在正常组织或病理 组织细胞中的表达是否异常。  Suitable oligonucleotide fragments selected from the polynucleotides of the present invention are used as hybridization probes in a variety of ways. For example, the probes can be used to hybridize to genomic or cDNA libraries of normal tissue or pathological tissue from different sources to It is determined whether it contains the polynucleotide sequence of the present invention and a homologous polynucleotide sequence is detected. Further, the probe can be used to detect the polynucleotide sequence of the present invention or its homologous polynucleotide sequence in normal tissue or pathology. Whether the expression in tissue cells is abnormal.
本实施例的目的是从本发明的多核苷酸 SEQ ID NO: 1 中挑选出合适的寡核苷 酸片段用作杂交探针, 并用滤膜杂交方法鉴定一些组织中是否含有本发明的多核 苷酸序列或其同源的多核苷酸序列。 滤膜杂交方法包括斑点印迹法、 Southern 印 迹法、 Northern 印迹法和复印方法等, 它们都是将待测的多核苷酸样品固定在滤 膜上后使用基本相同的步骤杂交。 这些相同的步骤是: 固定了样品的滤膜首先用 不含探针的杂交缓冲液进行预杂交, 以使滤膜上样品的非特异性的结合部位被载 体和合成的多聚物所饱和。 然后预杂交液被含有标记探针的杂交缓冲液替换, 并 保温使探针与靶核酸杂交。 杂交步骤之后, 未杂交上的探针被一系列洗膜步骤除 掉。 本实施例利用较高强度的洗膜条件(如较低盐浓度和较高的温度), 以使杂交 背景降低且只保留特异性强的信号。 本实施例选用的探针包括两类: 第一类探针 是完全与本发明的多核苷酸 SEQ ID NO: 1相同或互补的寡核苷酸片段; 第二类探 针是部分与本发明的多核苷酸 SEQ ID NO: 1相同或互补的寡核苷酸片段。 本实施 例选用斑点印迹法将样品固定在滤膜上, 在较高强度的的洗膜条件下, 第一类探 针与样品的杂交特异性最强而得以保留。  The purpose of this embodiment is to select a suitable oligonucleotide fragment from the polynucleotide SEQ ID NO: 1 of the present invention as a hybridization probe, and to identify whether some tissues contain the polynucleoside of the present invention by a filter hybridization method Acid sequence or a homologous polynucleotide sequence thereof. Filter hybridization methods include dot blotting, Southern imprinting, Northern blotting, and copying methods. They all use the same steps to immobilize the polynucleotide sample to be tested on the filter. These same steps are as follows: The sample-immobilized filter is first pre-hybridized with a probe-free hybridization buffer to saturate the non-specific binding site of the sample on the filter with the carrier and the synthesized polymer. The pre-hybridization solution is then replaced with a hybridization buffer containing labeled probes and incubated to hybridize the probes to the target nucleic acid. After the hybridization step, the unhybridized probes are removed by a series of membrane washing steps. This embodiment uses higher-intensity washing conditions (such as lower salt concentration and higher temperature), so that the hybridization background is reduced and only strong specific signals are retained. The probes used in this embodiment include two types: the first type of probes are oligonucleotide fragments that are completely the same as or complementary to the polynucleotide SEQ ID NO: 1 of the present invention; the second type of probes are partially related to the present invention The polynucleotide SEQ ID NO: 1 is the same or complementary oligonucleotide fragment. In this example, the dot blot method is used to fix the sample on the filter membrane. Under the high-intensity washing conditions, the first type of probe and the sample have the strongest hybridization specificity and are retained.
一、 探针的选用 First, the selection of the probe
从本发明的多核苷酸 SEQ ID NO: 1中选择寡核苷酸片段用作杂交探针, 应遵 循以下原则和需要考虑的几个方面:  The selection of oligonucleotide fragments from the polynucleotide SEQ ID NO: 1 of the present invention for use as hybridization probes should follow the following principles and several aspects to be considered:
1 , 探针大小优选范围为 18-50个核苷酸;  1. The preferred range of probe size is 18-50 nucleotides;
2 , GC含量为 30%-70%, 超过则非特异性杂交增加; 3, 探针内部应无互补区域; 2, GC content is 30% -70%, non-specific hybridization increases when it exceeds; 3. There should be no complementary regions inside the probe;
4, 符合以上条件的可作为初选探针, 然后进一步作计算机序列分析, 包括将该 初选探针分别与其来源序列区域 (即 SEQ ID NO: 1 )和其它已知的基因组序 列及其互补区进行同源性比较, 若与非靶分子区域的同源性大于 85%或者有超 过 15个连续碱基完全相同, 则该初选探针一般就不应该使用;  4. Those that meet the above conditions can be used as primary selection probes, and then further computer sequence analysis, including the primary selection probe and its source sequence region (ie, SEQ ID NO: 1) and other known genomic sequences and their complements The regions are compared for homology. If the homology with the non-target molecular region is greater than 85% or there are more than 15 consecutive bases, the primary probe should not be used;
5, 初选探针是否最终选定为有实际应用价值的探针还应进一步由实验确定。  5. Whether the preliminary selection probe is finally selected as a probe with practical application value should be further determined by experiments.
完成以上各方面的分析后挑选并合成以下二个探针:  After completing the above analysis, select and synthesize the following two probes:
探针 1 (probel), 属于第一类探针, 与 SEQ ID NO: 1 的基因片段完全 同源或互补 (41Nt):  Probe 1 (probel), which belongs to the first type of probe, is completely homologous or complementary to the gene fragment of SEQ ID NO: 1 (41Nt):
5'- TGCTGAATTCGTCCTCAGGAAACTTGTTAAAAATACAGATT- 3' ( SEQ ID NO: 8 )  5'- TGCTGAATTCGTCCTCAGGAAACTTGTTAAAAATACAGATT- 3 '(SEQ ID NO: 8)
探针 ( probe2 ), 属于第二类探针, 相当于 SEQ ID NO: 1 的基因片段 或其互补片段的替换突变序列 (41Nt):  Probe (probe2), which belongs to the second type of probe, is equivalent to the replacement mutant sequence of the gene fragment of SEQ ID NO: 1 or its complementary fragment (41Nt):
5'-TGCTGAATTCGTCCTCAGGACACTTGTTAAAAATACAGATT-3' ( SEQ ID NO: 9 ) 与以下具体实验步骤有关的其它未列出的常用试剂及其配制方法请参考文 献: DM PROBES G. H. Keller; M. M. Manak; Stockton Press, 1989 (USA)以及更常 用的分子克隆实验手册书籍如 《分子克隆实验指南》( 1998 年第二版) [美]萨姆 布鲁克等著, 科学出版社。  5'-TGCTGAATTCGTCCTCAGGACACTTGTTAAAAATACAGATT-3 '(SEQ ID NO: 9) For other commonly used reagents and their preparation methods not related to the following specific experimental steps, please refer to the literature: DM PROBES GH Keller; MM Manak; Stockton Press, 1989 (USA ) And more commonly used molecular cloning experiment manual books such as "Molecular Cloning Experiment Guide" (Second Edition 1998) [US] Sambrook et al., Science Press.
样品制备:  Sample Preparation:
1, 从新鲜或冰冻组织中提取 DNA  1.Extract DNA from fresh or frozen tissue
步骤: 1 ) 将新鲜或新鲜解冻的正常肝组织放入浸在冰上并盛有磷酸盐缓冲液 Steps: 1) Place fresh or freshly thawed normal liver tissue in ice and hold phosphate buffered saline
(PBS) 的平皿中。 用剪刀或手术刀将组织切成小块。 操作中应保持组织湿润。 2) 以 lOOOg离心切碎组织 10分钟。 3)用冷匀浆缓冲液 (0.25mol/L蔗糖; 25mmol/L Tris-HCl,pH7.5; 25mmol/LnaCl; 25mmol/L MgCl2 ) 悬浮沉淀(大约 10ml/g )。 4) 在 4°C用电动匀浆器以全速匀浆组织悬液, 直至组织被完全破碎。 5) lOOOg 离心 10分钟。 6)用重悬细胞沉淀(每 O. lg最初组织样品加 l-5ml), 再以 lOOOg离心 10分钟。 7)用裂解缓冲液重悬沉淀(每 O. lg最初组织样品加 lml ), 然后接以下 的苯酚抽提法。 (PBS). Cut the tissue into small pieces with scissors or a scalpel. Keep tissue moist during operation. 2) Centrifuge the tissue at 1,000 g for 10 minutes. 3) Suspend the precipitate (about 10 ml / g) with cold homogenization buffer (0.25 mol / L sucrose; 25 mmol / L Tris-HCl, pH 7.5; 25 mmol / LnaCl; 25 mmol / L MgCl 2 ). 4) Homogenize the tissue suspension at 4 ° C at full speed with an electric homogenizer until the tissue is completely broken. 5) Centrifuge at 1000g for 10 minutes. 6) Resuspend the cell pellet (l-5 ml per 0.1 g of the initial tissue sample), and centrifuge at 1,000 g for 10 minutes. 7) Resuspend the pellet with lysis buffer (1 ml per 0.1 g of the initial tissue sample), and then follow the phenol extraction method below.
2, DM的苯酚抽提法  2, DM phenol extraction method
步骤: 1)用 1- 10ml 冷 PBS 洗细胞, lOOOg离心 10分钟。 2)用冷细胞裂解 液重悬浮沉淀的细胞 (1 x 10s细胞 /ml ) 最少应用 lOOul 裂解缓冲液。 3)加 SDS 至终浓度为 1%, 如果在重悬细胞之前将 SDS直接加入到细胞沉淀中, 细胞可能会 形成大的团块而难以破碎, 并降低的总产率。 这一点在抽提 >107细胞时特别严重。 4)加蛋白酶 K至终浓度 200ug/ml。 5) 50°C保温反应 1小时或在 37°C轻轻振摇 过夜。 6)用等体积苯酚: 氯仿: 异戊醇 ( 25: 24: 1 )抽提, 在小离心机管中离 心 10分钟。 两相应清楚分离, 否则重新进行离心。 7)将水相转移至新管。 8)用 等体积氯仿: 异戊醇 (24: 1)抽提, 离心 10分钟。 9)将含 DNA的水相转移至新 管。 然后进行 DNA的纯化和乙醇沉淀。 Steps: 1) Wash cells with 1-10 ml of cold PBS and centrifuge at 1000 g for 10 minutes. 2) Resuspend the pelleted cells with cold cell lysate (1 x 10 s cells / ml) and apply a minimum of 100ul lysis buffer. 3) Add SDS to a final concentration of 1%. If SDS is directly added to the cell pellet before resuspending the cells, the cells may form large clumps that are difficult to break, and reduce the overall yield. This is particularly serious when extracting> 10 7 cells. 4) Add proteinase K to a final concentration of 200ug / ml. 5) Incubate at 50 ° C for 1 hour or shake gently at 37 ° C overnight. 6) Extract with an equal volume of phenol: chloroform: isoamyl alcohol (25: 24: 1) and centrifuge in a small centrifuge tube for 10 minutes. The two should be clearly separated, otherwise centrifuge again. 7) Transfer the water phase to a new tube. 8) Extract with an equal volume of chloroform: isoamyl alcohol (24: 1) and centrifuge for 10 minutes. 9) Transfer the DNA-containing aqueous phase to a new tube. The DNA was then purified and ethanol precipitated.
3, DNA的纯化和乙醇沉淀 3, DNA purification and ethanol precipitation
步骤: 1 ) 将 1 0体积 2mol/L醋酸钠和 2倍体积冷 100°/。乙醇加到 DNA溶液 中, 混匀。 在- 20°C放置 1小时或至过夜。 2) 离心 10分钟。 3)小心吸出或倒出 乙醇。 4)用 70%冷乙醇 500ul洗涤沉淀, 离心 5分钟。 5)小心吸出或倒出乙醇。 用 500ul冷乙醇洗涤沉淀, 离心 5分钟。 6)小心吸出或倒出乙醇, 然后在吸水纸 上倒置使残余乙醇流尽。 空气干燥 10-15 分钟, 以使表面乙醇挥发。 注意不要使 沉淀完全干燥, 否则较难重新溶解。 7) 以小体积 TE或水重悬 DM沉淀。 低速涡 旋振荡或用滴管吹吸, 同时逐渐增加 TE, 混合至 DNA充分溶解, 每 1- 5 χ 10δ细胞 所提取的大约加 lul。 Steps: 1) 10 volume of 2mol / L sodium acetate and 2 volumes of cold 100 ° /. Add ethanol to the DNA solution and mix. Leave at -20 ° C for 1 hour or overnight. 2) Centrifuge for 10 minutes. 3) Carefully aspirate or pour out the ethanol. 4) Wash the pellet with 500ul of 70% cold ethanol and centrifuge for 5 minutes. 5) Carefully aspirate or pour out the ethanol. Wash the pellet with 500ul of cold ethanol and centrifuge for 5 minutes. 6) Carefully aspirate or pour out the ethanol, then invert on the absorbent paper to drain off the residual ethanol. Air dry for 10-15 minutes to allow the surface ethanol to evaporate. Be careful not to allow the pellet to dry completely, otherwise it will be more difficult to re-dissolve. 7) Resuspend the DM pellet in a small volume of TE or water. Vortex at low speed or blow with a dropper while gradually increasing TE, mix until the DNA is fully lysed, and add approximately 1 ul per 1- 5 x 10 δ cells.
以下第 8- 13步骤仅用于必须除去污染时, 否则可直接进行第 14步骤。  The following steps 8-13 are only used when contamination must be removed, otherwise step 14 can be performed directly.
8 )将 RM酶 A加到 DNA溶液中, 终浓度为 100ug/ml, 37°C保温 30分钟。 9 )加 入 SDS和蛋白酶 K, 终浓度分别为 0.5%和 100ug/ml。 37°C保温 30分钟。 10)用 等体积的苯酚: 氯仿: 异戊醇 ( 25: 24: 1 )抽提反应液, 离心 10 分钟。 11)小 心移出水相, 用等体积的氯仿: 异戊醇 (24: 1 ) 重新抽提, 离心 10 分钟。 12) 小心移出水相, 加 1/10体积 2mol/L 醋酸钠和 2.5 体积冷乙醇, 混匀置 - 20。C 1 小时。 13)用 70%乙醇及 100%乙醇洗涤沉淀, 空气干燥, 重悬核酸, 过程同第 3 - 6步骤。 14) 测定 A26。和 A2S。以检测 DNA的纯度及产率。 15 )分装后存放于 - 20°C。 样膜的制备: 8) Add RMase A to the DNA solution to a final concentration of 100ug / ml, and incubate at 37 ° C for 30 minutes. 9) Add SDS and proteinase K, the final concentrations are 0.5% and 100ug / ml, respectively. Incubate at 37 ° C for 30 minutes. 10) Extract the reaction solution with an equal volume of phenol: chloroform: isoamyl alcohol (25: 24: 1) and centrifuge for 10 minutes. 11) Carefully remove the aqueous phase and re-extract with an equal volume of chloroform: isoamyl alcohol (24: 1) and centrifuge for 10 minutes. 12) Carefully remove the water phase, add 1/10 volume of 2mol / L sodium acetate and 2.5 volumes of cold ethanol, and mix well-20. C for 1 hour. 13) Wash the pellet with 70% ethanol and 100% ethanol, air dry, and resuspend the nucleic acid. The process is the same as steps 3-6. 14) Measure A 26 . And A 2S . To detect the purity and yield of DNA. 15) Store at -20 ° C after dispensing. Preparation of sample film:
1 )取 4 x 2 张适当大小的硝酸纤维素膜(NC膜), 用铅笔在其上轻轻标出点样 位置及样号, 每一探针需两张 NC膜, 以便在后面的实验步骤中分别用高强度条件 和强度条件洗膜 。  1) Take 4 x 2 pieces of nitrocellulose membrane (NC membrane) of appropriate size, and mark the spotting position and sample number on it with a pencil. Two NC membranes are needed for each probe for later experiments. In the step, the film is washed with high-strength conditions and strength conditions, respectively.
2) 吸取及对照各 15微升, 点于样膜上, 在室温中晾干。  2) Pipette and control 15 microliters each, spot on the sample film, and dry at room temperature.
3 )置于浸润有 0. Imol/LNaOH, 1.5mol/LNaCl的滤纸上 5分钟 (两次), 晾干置 于浸润有 0.5mol/L Tris-HCl ( pH7.0 ), 3mol/LNaCl的滤纸上 5分钟 (两次;), 晾 干。  3) Place on filter paper impregnated with 0.1 mol / L NaOH, 1.5 mol / L NaCl for 5 minutes (twice), dry and place on filter paper impregnated with 0.5 mol / L Tris-HCl (pH 7.0), 3 mol / L NaCl Leave on for 5 minutes (twice;) and dry.
4)夹于干净滤纸中, 以铝箔包好, 60- 80°C真空干燥 2小时。  4) Clamped in clean filter paper, wrapped in aluminum foil, and dried under vacuum at 60-80 ° C for 2 hours.
探针的标记 1 ) 3 μ lProbe( 0.1OD/10 μ 1 ),加入 2 μ IKinase缓冲液, 8-10 uCi γ- 32P- dATP+2U Kinase, 以补加至终体积 20 μ 1。 Labeling of probes 1) 3 μl Probe (0.1OD / 10 μ 1), add 2 μ IKinase buffer, 8-10 uCi γ- 32 P- dATP + 2U Kinase, to make up to a final volume of 20 μ 1.
2) 37 °C 保温 2小时。  2) Incubate at 37 ° C for 2 hours.
3)加 1/5体积的溴酚蓝指示剂 (BPB)。  3) Add 1/5 volume of Bromophenol Blue Indicator (BPB).
4)过 Sephadex G-50柱。  4) Pass Sephadex G-50 column.
5) 至有 32P- Probe洗出前开始收集第一峰(可用 Monitor监测;)。 5) Start collecting the first peak before 32 P-Probe washes out (monitoring can be used to monitor;).
6) 5滴 /管, 收集 10- 15管。  6) 5 drops / tube, collect 10-15 tubes.
7)用液体闪烁仪监测同位素量  7) Monitor the amount of isotope with a liquid scintillator
8 ) 合并第一峰的收集液后即为所需制备的 32P- Probe (第二峰为游离 γ- 32P- dATP )。 8) After combining the collection solutions of the first peak, the 32 P-Probe (the second peak is free γ- 32 P-dATP) is prepared.
预杂交 .  Pre-hybridization.
将样膜置于塑料袋中,加入 3- 10mg预杂交液(10xDenhardt's;6xSSC, 0. lmg/ml CT DNA (小牛胸腺 DNA)。), 封好袋口后, 68°C水洛摇 2小时。  Place the sample film in a plastic bag, add 3-10 mg of pre-hybridization solution (10xDenhardt's; 6xSSC, 0.1 mg / ml CT DNA (calf thymus DNA).), Seal the bag, and shake at 68 ° C in water. 2 hour.
杂交  Cross
将塑料袋剪去一角, 加入制备好的探针, 封好袋口后, 42 C水洛摇过夜。 洗膜:  Cut a corner of the plastic bag, add the prepared probe, seal the bag, and shake at 42 ° C overnight. Wash film:
高强度洗膜:  High-intensity washing film:
1)取出已杂交好的样膜。  1) Take out the hybridized sample membrane.
2 ) 2xSSC, 0.1%SDS中, 40°C洗 15分钟 ( 2次)。  2) 2xSSC, 0.1% SDS, wash at 40 ° C for 15 minutes (twice).
3 ) 0. lxSSC, 0.1%SDS中, 40°C洗 15分钟 ( 2次)。  3) 0.1xSSC, 0.1% SDS, wash at 40 ° C for 15 minutes (twice).
4) 0. lxSSC, 0.1%SDS中, 55°C洗 30分钟 ( 2次), 室温晾干。  4) Wash in 0.1xSSC, 0.1% SDS at 55 ° C for 30 minutes (twice), and dry at room temperature.
低强度洗膜:  Low-intensity washing film:
1)取出已杂交好的样膜。  1) Take out the hybridized sample membrane.
2 ) 2xSSC, 0.1%SDS中, 37。C洗 15分钟 ( 2次)。  2) 2xSSC, 0.1% SDS, 37. C Wash for 15 minutes (twice).
3 ) 0. lxSSC, 0.1%SDS中, 37。C洗 15分钟 ( 2次)。  3) 0.1xSSC, 0.1% SDS, 37. C Wash for 15 minutes (twice).
4) 0. lxSSC, 0.1%SDS中, 40°C洗 15分钟 ( 2次), 室温晾干。  4) In 0.1xSSC, 0.1% SDS, wash at 40 ° C for 15 minutes (twice), and dry at room temperature.
X-光自显影:  X-ray auto-development:
- 70°C, X-光自显影 (压片时间根据杂交斑放射性强弱而定)。  -70 ° C, X-ray autoradiography (press time depends on the radioactivity of the hybrid spot).
实验结果:  Experimental results:
釆用低强度洗膜条件所进行的杂交实验, 以上两个探针杂交斑放射性强弱没 有明显区别; 而釆用高强度洗膜条件所进行的杂交实验, 探针 1 的杂交斑放射性 强度明显强于另一个探针杂交斑的放射性强度。 因而可用探针 1 定性和定量地分 析本发明的多核苷酸在不同组织中的存在和差异表达。 实施例 7 DNA Microarray 釆 The hybridization experiments performed under low-intensity membrane washing conditions did not differ significantly in the radioactivity of the above two probe hybrid spots; while the hybridization experiments performed under high-intensity membrane washing conditions, the radioactive intensity of hybridization spots of probe 1 was obvious. Stronger in radioactivity than the hybridization spot of another probe. Therefore, probe 1 can be used for qualitative and quantitative analysis. The presence and differential expression of the polynucleotide of the present invention in different tissues are analyzed. Example 7 DNA Microarray
基因芯片或基因微矩阵 (DM Microarray )是目前许多国家实验室和大制药 公司都在着手研制和开发的新技术, 它是指将大量的靶基因片段有序地、 高密度 地排列在坡璃、 硅等载体上, 然后用荧光检测和计算机软件进行数据的比较和分 析, 以达到快速、 高效、 高通量地分析生物信息的目的。 本发明的多核苷酸可作 为靶 DNA 用于基因芯片技术用于高通量研究新基因功能; 寻找和筛选组织特异性 新基因特别是肿瘤等疾病相关新基因; 疾病的诊断, 如遗传性疾病。 其具体方法 步骤在文献中巳有多种报道, 如可参阅文献 DeRi s i, J. L. , Lyer, V. &Brown, P. 0. (1997) Sc ience278, 680-686.及文献 Hel le, R. A., Schema, M. , Cha i , A. , Shalom, D. , (1997) PNAS 94: 2150-2155.  Gene chip or gene microarray (DM Microarray) is a new technology currently being developed by many national laboratories and large pharmaceutical companies. It refers to the orderly and high-density arrangement of a large number of target gene fragments on slopes , Silicon and other carriers, and then use fluorescence detection and computer software to compare and analyze the data, in order to achieve the purpose of rapid, efficient, high-throughput analysis of biological information. The polynucleotide of the present invention can be used as target DNA for gene chip technology for high-throughput research of new gene functions; search for and screen new tissue-specific genes, especially new genes related to diseases such as tumors; diagnosis of diseases such as hereditary diseases . The specific method steps have been reported in the literature. For example, see the literature DeRi si, JL, Lyer, V. & Brown, P. 0. (1997) Sc ience 278, 680-686. And the literature Hel le, RA, Schema , M., Cha i, A., Shalom, D., (1997) PNAS 94: 2150-2155.
(一) 点样  (A) spotting
各种不同的全长 cDM共计 4000条多核苷酸序列作为靶 DNA,其中包括本发明 的多核苷酸。 将它们分别通过 PCR 进行扩增, 纯化所得扩增产物后将其浓度调到 500ng/ul 左右, 用 Cartes ian 7500 点样仪(购自美国 Cartes ian公司)点于玻璃 介质上, 点与点之间的距离为 280 μ ηι。 将点样后的玻片进行水合、 干燥、 置于紫 外交联仪中交联, 洗脱后干燥使 DNA 固定在玻璃片上制备成芯片。 其具体方法步 骤在文献中已有多种报道, 本实施例的点样后处理步骤是:  A total of 4,000 polynucleotide sequences of various full-length cDMs are used as target DNA, including the polynucleotide of the present invention. They were amplified by PCR respectively. After purification, the amplified product was adjusted to a concentration of about 500 ng / ul, and spotted on a glass medium with a Cartesian 7500 spotter (purchased from Cartesian Company, USA). The distance between them is 280 μ ηι. The spotted slides were hydrated, dried, and cross-linked in a purple diplomatic coupling instrument. After elution, the DNA was fixed on a glass slide to prepare a chip. The specific method steps have been reported in the literature in various ways. The post-spot processing steps of this embodiment are:
1. 潮湿环境中水合 4小时;  1. Hydration in a humid environment for 4 hours;
2. 0. 2%SDS洗涤 1分钟;  2. 0.2% SDS was washed for 1 minute;
3. ddH20洗涤两次, 每次 1分钟; 3. Wash twice with ddH 2 0 for 1 minute each time;
4. NaBH4封闭 5分钟; 4. NaBH 4 is blocked for 5 minutes;
5. 95°C水中 2分钟;  5. 95 ° C water for 2 minutes;
6. Q. 2%SDS洗涤 1分钟;  6. Q. Wash with 2% SDS for 1 minute;
7. ddH20冲洗两次; 7. Rinse twice with ddH 2 0;
8. 凉干, 25°C储存于暗处备用。  8. Dry and store at 25 ° C in the dark for future use.
(二)探针标记  (Two) probe marking
用一步法分别从人体混合组织与机体特定组织 (或经过刺激的细胞株) 中抽 提总 mRNA, 并用 Ol igotex mRNA Midi Ki t (购自 QiaGen公司)纯化 mRNA,通过反 转录分别将荧光试剂 Cy 3dUTP (5-Am i no-pr opa r gy 1 -2- -deoxyur i d i ne 5--tr iphate coupled to Cy3 f luorescent dye, 购自 Amersham Phamacia Biotech公司)标记 人体混合组织的 mRM,用荧光试剂 Cy5dUTP (5- Amino- propargyl-2'-deoxyur idine 5'-tr iphate coupled to Cy5 f luorescent dye, 购自 Amersham Pharaacia Biotech 公司)标记机体特定组织 (或经过刺激的细胞株) mRM, 经纯化后制备出探针。 具 体步骤参照及方法见: Total mRNA was extracted from human mixed tissues and specific tissues (or stimulated cell lines) in one step, and the mRNA was purified with Oligotex mRNA Midi Ki t (purchased from QiaGen). Cy 3dUTP (5-Am i no-pr opa r gy 1 -2- -deoxyur idi ne 5--tr iphate coupled to Cy3 f luorescent dye, purchased from Amersham Phamacia Biotech) The mRM of human mixed tissues was labeled with a fluorescent reagent Cy5dUTP (5- Amino- propargyl-2'-deoxyur idine 5'-tr iphate coupled to Cy5 f luorescent dye, purchased from Amersham Pharaacia Biotech). Cell line) mRM, probes were prepared after purification. For specific steps and methods, see:
Schena, Schena,
M. , Sha lon, D. , Hel ler, R. (1996) Proc. Nat l. Acad. Sci. USA. Vol. 93: 10614- 10619. Schena, M. , Shalon, Dar i. , Davis, R. W. (1995) Science. 270. (20) : 467-480. (三) 杂交  M., Sha lon, D., Hel ler, R. (1996) Proc. Nat l. Acad. Sci. USA. Vol. 93: 10614- 10619. Schena, M., Shalon, Dar i., Davis, RW (1995) Science. 270. (20): 467-480. (3) Hybridization
分别将来自 以上两种组织的探针与芯片一起在 UniHyb™ Hybr idizat ion Solut ion (购自 TeleChem公司)杂交液中进行杂交 16 小时, 室温用洗涤液 (l x SSC, 0. 2%SDS ) 洗涤后用 ScanArray 3000扫描仪(购自美国 General Scanning公 司)进行扫描, 扫描的图象用 Imagene软件 (美国 Biodi scovery公司) 进行数据 分析处理, 算出每个点的 Cy3/Cy5比值。  The probes from the above two types of tissues were hybridized with the chip in a UniHyb ™ Hybridization Solution (purchased from TeleChem) hybridization solution for 16 hours, and washed with a washing solution (lx SSC, 0.2% SDS) at room temperature. Scanning was performed with a ScanArray 3000 scanner (purchased from General Scanning, USA), and the scanned images were analyzed and processed with Imagene software (Biodiscovery, USA) to calculate the Cy3 / Cy5 ratio of each point.
以上机体特定组织 (或经过刺激的细胞株) 分别为胎脑、 膀胱粘膜、 PMA+的 Ecv304细胞株、 LPS+的 Ecv304细胞株胸腺、 正常成纤维细胞 1024NC、 Fibroblas t , 生长因子刺激, 1024NT、 疤痕成 fc生长因子刺激, 1013HT、 疤痕成 fc未用生长因 子刺激, 、 膀胱癌建株细胞 EJ、 膀胱癌旁、 膀胱癌、 肝癌、 肝癌细胞株、 胎皮、 脾脏、 前列腺癌、 空肠腺癌、 贲门癌。 根据这 18个 Cy3/Cy5比值绘出折方图。 (图 1 ) 。 由图可见本发明所述的人成束和延伸蛋白 16. 61和人 FEZ1蛋白表达谱很 相似。 工业实用性  The above specific tissues (or stimulated cell lines) are fetal brain, bladder mucosa, PMA + Ecv304 cell line, LPS + Ecv304 cell line, thymus, normal fibroblasts 1024NC, Fibroblas t, growth factor stimulation, 1024NT, scar formation fc growth factor stimulation, 1013HT, scar into fc without growth factor stimulation, bladder cancer cell EJ, bladder cancer, bladder cancer, liver cancer, liver cancer cell line, fetal skin, spleen, prostate cancer, jejunum adenocarcinoma, cardia cancer. Draw a graph based on these 18 Cy3 / Cy5 ratios. (figure 1 ) . It can be seen from the figure that the expression profiles of human bundle and elongation protein 16.61 and human FEZ1 protein according to the present invention are very similar. Industrial applicability
本发明的多肽以及该多肽的拮抗剂、 激动剂和抑制剂可直接用于疾病治疗, 例如, 可治疗恶性肿瘤、 肾上腺缺乏症、 皮肤病、 各类炎症、 HIV 感染和免疫 性疾病等。  The polypeptide of the present invention and the antagonists, agonists and inhibitors of the polypeptide can be directly used in the treatment of diseases, for example, it can treat malignant tumors, adrenal deficiency, skin diseases, various inflammations, HIV infections and immune diseases.
在发育中的神经系统中, 轴突往往要穿过不同的细胞外环境才能到达目的 地。 大多数轴突沿着其他的轴突生长, 而将不同的轴突集中在神经束中, 这很 可能在神经系统的组织中起重要的作用。 人 FEZ1 蛋白具有两个功能: 其一, 通过与细胞表面黏附蛋白, 轴突膜, 细胞骨架等的相互作用, 在神经纤维束的 形成和 /或维持中起重要作用; 其二, 将信号从细胞表面传递到细胞内部来调 节轴突的延伸和黏附。 在体内人 FEZ1 蛋白的表达异常可影响神经纤维束的形 成和 /或维持, 进而导致相关疾病的发生。 本发明的多肽的表达谱与人 FEZ1 蛋白的表达谱相一致, 两者具有相似的生 物学功能。 本发明的多肽在体内对于神经纤维束的形成和 /或维持具有重要作 用, 其表达异常可导致神经系统发育畸形和 /或功能紊乱性疾病的发生, 这些 疾病包括但不限于: 神经系统的常见畸形: 神经管缺陷 (无脑畸形、 脊髓裂、 脊髓脊膜膨出、 积水性脑膜脑膨出) , 脑内 /外脑积水等 In the developing nervous system, axons often pass through different extracellular environments to reach their destination. Most axons grow along other axons, and different axons are concentrated in the nerve bundle, which is likely to play an important role in the tissues of the nervous system. Human FEZ1 protein has two functions: first, it plays an important role in the formation and / or maintenance of nerve fiber bundles through interaction with cell surface adhesion proteins, axon membranes, and cytoskeleton; etc. The cell surface is passed inside the cell to regulate the axon extension and adhesion. Abnormal expression of human FEZ1 protein in vivo can affect the formation and / or maintenance of nerve fiber bundles, and then lead to the occurrence of related diseases. The expression profile of the polypeptide of the present invention is consistent with the expression profile of the human FEZ1 protein, and both have similar biological functions. The polypeptide of the present invention has an important role in the formation and / or maintenance of nerve fiber bundles in the body, and its abnormal expression can lead to the development of neurological malformations and / or dysfunctional diseases, including but not limited to: Malformations: neural tube defects (no cerebral malformations, spina bifida, spinal meningocele, hydrocephalous meningoencephalocele), hydrocephalus in / outside the brain, etc.
大脑皮层功能紊乱相关临床症状: - 一. 额叶: 痴呆, 人格改变 (额叶前部) , 斜视, 书写不能 (额中回后部) , 运动性失语 (额 下回后部) , 嗅觉缺失 (额叶底部) , 肢体 瘫痪、 抽搐(中央前回) 等;  Cerebral cortical dysfunction-related clinical symptoms:-1. Frontal lobe: dementia, personality changes (frontal frontal), strabismus, inability to write (back middle frontal gyrus), motor aphasia (back frontal gyrus), loss of smell (Bottom of frontal lobe), limb paralysis, convulsions (central gyrus), etc .;
二. 顶叶: 感觉障碍(中央后回) , 失读 (左侧角回) , 体像障碍(右侧顶叶) 等; Parietal lobe: sensory disturbance (central posterior gyrus), dyslexia (left corner gyrus), body image disorder (right parietal lobe), etc .;
三. 颞叶: 钩回发作 (颞叶前部) , 感觉性 /健忘性失语 (左侧颞叶) , 听力 障碍 (颞上回后部) 等; Temporal lobe: Hookback attack (anterior temporal lobe), sensory / amnestic aphasia (left temporal lobe), hearing impairment (rear superior temporal gyrus), etc.
四. 枕叶: 偏盲, 幻视, 视觉失认等; 4. Occipital lobe: hemianopia, hallucinations, visual disagreement, etc.
五. 边缘系统: 情绪症状, 记忆丧失, 意识障碍, 幻觉等; V. Limbic system: emotional symptoms, memory loss, disturbance of consciousness, hallucinations, etc.
周围神经系统功能紊乱相关疾病  Disorders related to peripheral nervous system dysfunction
周围神经系统包括: 脑神经 12 对、 脊神经 31 对、 植物神经 (交感和副交 感) , 其功能紊乱可导致相关疾病或 /和临床症状的发生, 这些疾病或 /和临床 症状包括但不限于:  Peripheral nervous system includes: 12 pairs of brain nerves, 31 pairs of spinal nerves, and autonomic nerves (sympathetic and parasympathetic). Its functional disorders can lead to the occurrence of related diseases or / and clinical symptoms. These diseases or / and clinical symptoms include, but are not limited to:
一. 脑神经功能紊乱: I. Neurological disorders:
嗅觉味觉丧失 (嗅神经) , 视力障碍和 /或视野缺损 (视神经) , 眼肌 瘫痪, 复视, 瞳孔大小 /反射的改变 (动眼神经、 滑车神经、 展神经) , 面 部感觉障碍, 咀嚼肌瘫痪, 神经麻痹性角膜炎 (三叉神经) , 面瘫 (面神 经) , 耳聋, 耳鸣, 眩暈, 平衡障碍, 眼震 (听神经) , 发音嘶哑, 吞咽 困难, 咽反射消失 (舌咽神经、 迷走神经) , 肩下垂, 转颈 /耸肩乏力 (副 神经) , 舌肌瘫痪 (舌下神经) 等; .  Loss of olfactory taste (olfactory nerve), visual impairment and / or visual field defect (optic nerve), ophthalmoplegia, diplopia, changes in pupil size / reflexes (eye movement nerve, pulley nerve, abductor nerve), facial sensory disorders, masticatory muscles Paralysis, neuroparalytic keratitis (trigeminal nerve), facial paralysis (facial nerve), deafness, tinnitus, vertigo, balance disorders, nystagmus (auditory nerve), hoarseness, dysphagia, loss of pharyngeal reflex (glossopharyngeal nerve, vagus nerve), shoulder Sagging, turning neck / shrugs, fatigue (collateral nerve), lingual muscle paralysis (sublingual nerve), etc .;
二. 脊神经功能紊乱: Second, spinal nerve dysfunction:
1. 感觉障碍: 抑制性感觉障碍 (感觉缺失、 感觉减退) , 刺激性感觉障碍 (感觉过敏、 感觉异常、 疼痛) 等;  1. Paresthesia: Inhibitory paresthesia (lack of sensation, hypoparesis), irritating paresthesia (allergy, paresthesia, pain), etc .;
2. 运动障碍: 中枢性瘫痪 (单瘫、 偏瘫、 截瘫) , 周围性瘫痪等; 三. 植物神经 (交感和副交感) 功能紊乱: 2. Dyskinesias: central paralysis (monoplegia, hemiplegia, paraplegia), peripheral paralysis, etc .; 3. Autonomic (sympathetic and parasympathetic) disorders:
1. 心脑血管系统:  1. Cardio-cerebral vascular system:
各种心律失常, 如房早, 室早, 窦速, 室上速, 室速, 房扑, 房颤, 窦 缓, 窦性停搏,  Various arrhythmias, such as early atrial, early ventricular, sinus tachycardia, supraventricular tachycardia, ventricular tachycardia, atrial flutter, atrial fibrillation, sinus bradycardia, sinus arrest,
病窦综合症, 室内传导阻滞等;  Sinus syndrome, indoor conduction block, etc .;
CAD, 心绞痛, 心肌梗塞, 心血管神经官能症, 急性心衰, 慢性心衰, HBP , 神经原  CAD, angina pectoris, myocardial infarction, cardiovascular neurosis, acute heart failure, chronic heart failure, HBP, neuron
性直立性低血压, 暈厥, 脑血管意外, 低血压性休克等;  Orthostatic hypotension, syncope, cerebrovascular accident, hypotension shock, etc .;
2. 呼吸系统:  2. Respiratory system:
肺水肿, 呼吸肌麻痹, 呼吸衰竭, 支气管哮喘等;  Pulmonary edema, respiratory muscle paralysis, respiratory failure, bronchial asthma, etc .;
3. 腹腔脏器疾病:  3. Celiac disease:
恶心, 呕吐, 胃肠胀气, 胃肠绞痛, 胆绞痛, 肾绞痛, 胃肠梗阻, 尿路 梗阻, 急性梗阻性胆管炎, 急性胰腺炎, 慢性胰腺炎等;  Nausea, vomiting, flatulence, gastrointestinal colic, biliary colic, renal colic, gastrointestinal obstruction, urinary tract obstruction, acute obstructive cholangitis, acute pancreatitis, chronic pancreatitis, etc .;
尿储留, 遗尿症, 膀胱刺激症 (尿频, 尿急, 尿痛) , 便秘等; 反流性食管炎, 慢性胃炎, 消化性溃疡, 非溃疡性消化不良, 神经性腹 泻等,  Urinary retention, enuresis, bladder irritation (frequency of urination, urgency, dysuria), constipation, etc .; reflux esophagitis, chronic gastritis, peptic ulcer, non-ulcerative dyspepsia, neurogenic diarrhea, etc.,
胃肠神经官能症: 癔球症, 心因性呕吐, 神经性 气, 神经性厌食, 肠 激惹综合症等;  Gastrointestinal neurosis: Hydatid disease, psychogenic vomiting, neurogenic qi, anorexia nervosa, irritable bowel syndrome, etc .;
4. 内分泌系统: 4. Endocrine system:
糖尿病, 低血糖症, 脂血症, 高脂蛋白血症, 肥胖症, 嗜铬细胞瘤等; Diabetes, hypoglycemia, lipidemia, hyperlipoproteinemia, obesity, pheochromocytoma, etc .;
5. 肌肉运动系统: 5. Muscle motor system:
重症肌无力, 周期性瘫痪, 肌强直, 肌痉挛等;  Myasthenia gravis, periodic paralysis, muscle rigidity, muscle spasm, etc .;
6. 外周血管性疾病:  6. Peripheral vascular disease:
雷诺病, 红斑性肢痛等;  Raynaud's disease, erythematous limb pain, etc .;
7. 其他: 痛经, 青光眼, 视力障碍及多脏器缺血性坏死, 如肾坏死 (肾衰) , 肝坏死, 肠坏死等;  7. Others: dysmenorrhea, glaucoma, visual impairment and ischemic necrosis of multiple organs, such as renal necrosis (renal failure), liver necrosis, intestinal necrosis, etc .;
综合上述, 本发明的多肽以及该多肽的拮抗剂, 激动剂和抑制剂可直接用 于多种疾病的治疗, 例如神经系统发育畸形和 /或功能紊乱性疾病等。  In summary, the polypeptide of the present invention and the antagonists, agonists and inhibitors of the polypeptide can be directly used for the treatment of various diseases, such as developmental disorders of the nervous system and / or dysfunctional diseases.
本发明也提供了筛选化合物以鉴定提高(激动剂)或阻遏(拮抗剂)人成束和 延伸蛋白 16. 61 的药剂的方法。 激动剂提高人成束和延伸蛋白 16. 61 刺激细胞 增殖等生物功能, 而拮抗剂阻止和治疗与细胞过度增殖有关的紊乱如各种癌症。 例如, 能在药物的存在下, 将 ΐ乳动物细胞或表达人成束和延伸蛋白 16. 61 的 膜制剂与标记的人成束和延伸蛋白 16. 61 —起培养。 然后测定药物提高或阻遏 此相互作用的能力。 The invention also provides methods of screening compounds to identify agents that increase (agonist) or suppress (antagonist) human bundling and elongation of 16.61. Agonists enhance biological functions such as human bundling and elongation 16.61 to stimulate cell proliferation, while antagonists prevent and treat disorders related to excessive cell proliferation, such as various cancers. For example, in the presence of a drug, a mammalian cell or a human expressing bundle and elongation protein 16.61 of Membrane formulations were cultured with labeled human bundling and elongin 16.61. The ability of the drug to increase or block this interaction is then determined.
人成束和延伸蛋白 16. 61 的拮抗剂包括筛选出的抗体、 化合物、 受体缺失 物和类似物等。 人成束和延伸蛋白 16. 61 的拮抗剂可以与人成束和延伸蛋白 16. 61 结合并消除其功能, 或是抑制该多肽的产生, 或是与该多肽的活性位点 结合使该多肽不能发挥生物学功能。  Antagonists of human bundling and elongation proteins 16.61 include antibodies, compounds, receptor deletions, and the like that have been screened. Antagonists of human bundling and elongin 16.61 can bind to human bundling and elongin 16.61 and eliminate its function, or inhibit the production of the polypeptide, or bind to the active site of the polypeptide to make the polypeptide Cannot perform biological functions.
在筛选作为拮抗剂的化合物时, 可以将人成束和延伸蛋白 16. 61 加入生物 分析测定中, 通过测定化合物对人成束和延伸蛋白 16. 61 和其受体之间相互作 用的影响来确定化合物是否是拮抗剂。 用上述筛选化合物的同样方法, 可以筛 选出起拮抗剂作用的受体缺失物和类似物。 能与人成束和延伸蛋白 16. 61 结合 的多肽分子可通过筛选由各种可能组合的氨基酸结合于固相物组成的随机多肽 库而获得。 筛选时, 一般应对人成束和延伸蛋白 16. 61分子进行标记。  When screening compounds as antagonists, human bundles and elongin 16.61 can be added to bioanalytical assays by measuring the effects of compounds on the interactions between human bundles and elongin 16.61 and their receptors Determine if the compound is an antagonist. Receptor deletions and analogs that act as antagonists can be screened in the same way as for screening compounds described above. Polypeptide molecules capable of binding to human bundling and elongation protein 16.61 can be obtained by screening a random peptide library composed of various possible combinations of amino acids bound to a solid phase. In screening, human bundles and elongin 16.61 molecules should generally be labeled.
本发明提供了用多肽, 及其片段、 衍生物、 类似物或它们的细胞作为抗原 以生产抗体的方法。 这些抗体可以是多克隆抗体或单克隆抗体。 本发明还提供 了针对人成束和延伸蛋白 16. 61抗原决定簇的抗体。 这些抗体包括(但不限于): 多克隆抗体、 单克隆抗体、 嵌合抗体、 单链抗体、 Fab 片段和 Fab 表达文库产 生的片段。  The present invention provides a method for producing antibodies using polypeptides, and fragments, derivatives, analogs or cells thereof as antigens. These antibodies can be polyclonal or monoclonal antibodies. The invention also provides antibodies directed against human bunching and elongating protein 16.61 epitopes. These antibodies include (but are not limited to): polyclonal antibodies, monoclonal antibodies, chimeric antibodies, single chain antibodies, Fab fragments, and fragments generated from Fab expression libraries.
多克隆抗体的生产可用人成束和延伸蛋白 16. 61 直接注射免疫动物 (如家 兔, 小鼠, 大鼠等) 的方法得到, 多种佐剂可用于增强免疫反应, 包括但不限 于弗氏佐剂等。 制备人成束和延伸蛋白 16. 61 的单克隆抗体的技术包括但不限 于杂交瘤技术(Kohler and Mi l s te in. Nature, 1975 , 256: 495-497) , 三瘤技术, 人 Β-细胞杂交瘤技术, EBV-杂交瘤技术等。 将人恒定区和非人源的可变区结合 的嵌合抗体可用已有的技术生产(Morr i son e t a l , PNAS, 1985, 81: 6851)。 而已 有的生产单链抗体的技术(U. S. Pa t No. 4946778)也可用于生产抗人成束和延伸 蛋白 16. 61的单链抗体。  The production of polyclonal antibodies can be obtained by human bunching and elongating protein 16.61 by direct injection into immunized animals (such as rabbits, mice, rats, etc.). A variety of adjuvants can be used to enhance the immune response, including but not limited to 'S adjuvant and so on. Techniques for preparing monoclonal antibodies to human bundling and elongating protein 16.61 include, but are not limited to, hybridoma technology (Kohler and Miste in. Nature, 1975, 256: 495-497), triple tumor technology, human beta-cells Hybridoma technology, EBV-hybridoma technology, etc. Chimeric antibodies that bind human constant regions and non-human-derived variable regions can be produced using existing techniques (Morrison et al, PNAS, 1985, 81: 6851). The existing technology for producing single chain antibodies (U.S. Pat No. 4946778) can also be used to produce single chain antibodies against human bundling and elongation protein 16.61.
抗人成束和延伸蛋白 16. 61 的抗体可用于免疫组织化学技术中, 检测活检 标本中的人成束和延伸蛋白 16. 61。  Antibodies against human bundling and elongin 16.61 can be used in immunohistochemistry to detect human bundling and elongin 16.61 in biopsy specimens.
与人成束和延伸蛋白 16. 61 结合的单克隆抗体也可用放射性同位素标记, 注入体内可跟踪其位置和分布。 这种放射性标记的抗体可作为一种非创伤性诊 断方法用于肿瘤细胞的定位和判断是否有转移。  Monoclonal antibodies that bind to human bundling and elongation protein 16.61 can also be labeled with radioisotopes and injected into the body to track their location and distribution. This radiolabeled antibody can be used as a non-invasive diagnostic method to locate tumor cells and determine whether there is metastasis.
抗体还可用于设计针对体内某一特珠部位的免疫毒素。 如人成束和延伸蛋 白 16. 61 高亲和性的单克隆抗体可与细菌或植物毒素(如白喉毒素, 蓖麻蛋白, 红豆碱等)共价结合。 一种通常的方法是用巯基交联剂如 SPDP , 攻击抗体的氨 基, 通过二硫键的交换, 将毒素结合于抗体上, 这种杂交抗体可用于杀灭人成 束和延伸蛋白 16. 61阳性的细胞。 Antibodies can also be used to design immunotoxins against a specific bead site in the body. Such as human bundling and elongation protein 16. 61 High affinity monoclonal antibodies can interact with bacterial or plant toxins (such as diphtheria toxin, ricin, Ormosine, etc.). A common method is to attack the amino group of an antibody with a thiol cross-linking agent such as SPDP, and bind the toxin to the antibody through the exchange of disulfide bonds. This hybrid antibody can be used to kill human bunching and elongating protein 16. Positive cells.
本发明中的抗体可用于治疗或预防与人成束和延伸蛋白 16. 61 相关的疾 病。 给予适当剂量的抗体可以刺激或阻断人成束和延伸蛋白 16. 61 的产生或活 性。  The antibodies of the present invention can be used to treat or prevent diseases associated with human bundling and elongation protein 16.61. Administration of appropriate doses of antibodies can stimulate or block the production or activity of human bundling and elongation proteins 16.61.
本发明还涉及定量和定位检测人成束和延伸蛋白 16. 61 水平的诊断试验方 法。 这些试验是本领域所熟知的, 且包括 FI SH测定和放射免疫测定。 试验中所 检测的人成束和延伸蛋白 16. 61 水平, 可以用作解释人成束和延伸蛋白 16. 61 在各种疾病中的重要性和用于诊断人成束和延伸蛋白 16. 61起作用的疾病。  The invention also relates to a diagnostic test method for the quantitative and localized detection of human bundling and elongin 16.61 levels. These tests are well known in the art and include FI SH assays and radioimmunoassays. The level of human bundling and elongin 16.61 detected in the test can be used to explain the importance of human bundling and elongin 16.61 in various diseases and for the diagnosis of human bundling and elongin 16.61 A working disease.
本发明的多肽还可用作肽谱分析, 例如, 多肽可用物理的、 化学或酶进行 特异性切割, 并进行一维或二维或三维的凝胶电泳分析,更好的是进行质谱分 析。  The polypeptide of the present invention can also be used for peptide mapping analysis. For example, the polypeptide can be specifically cleaved by physical, chemical or enzymatic analysis, and subjected to one-dimensional or two-dimensional or three-dimensional gel electrophoresis analysis, and more preferably mass spectrometry analysis.
编码人成束和延伸蛋白 16. 61 的多核苷酸也可用于多种治疗目的。 基因治 疗技术可用于治疗由于人成束和延伸蛋白 16. 61 的无表达或异常 /无活性表达所 致的细胞增殖、 发育或代谢异常。 重组的基因治疗载体(如病毒载体)可设计用 于表达变异的人成束和延伸蛋白 16. 61 , 以抑制内源性的人成束和延伸蛋白 16. 61 活性。 例如, 一种变异的人成束和延伸蛋白 16. 61 可以是缩短的、 缺失 了信号传导功能域的人成束和延伸蛋白 16. 61 , 虽可与下游的底物结合, 但缺 乏信号传导活性。 因此重组的基因治疗载体可用于治疗人成束和延伸蛋白 16. 61 表达或活性异常所致的疾病。 来源于病毒的表达载体如逆转录病毒、 腺病毒、 腺病毒相关病毒、 单纯疱疹病毒、 细小病毒等可用于将编码人成束和延伸蛋白 16. 61 的多核苷酸转移至细胞内。 构建携带编码人成束和延伸蛋白 16. 61 的多 核苷酸的重组病毒载体的方法可见于已有文献(Sambrook,e t a l . )。 另外重组编 码人成束和延伸蛋白 16. 61的多核苷酸可包装到脂质体中转移至细胞内。  Polynucleotides encoding human bundling and elongation proteins 16.61 can also be used for a variety of therapeutic purposes. Gene therapy techniques can be used to treat abnormal cell proliferation, development, or metabolism caused by the lack of expression or abnormal / inactive expression of human bundling and elongation protein 16.61. Recombinant gene therapy vectors (such as viral vectors) can be designed to express mutated human bundling and elongating protein 16.61 to inhibit endogenous human bundling and elongating protein 16.61 activity. For example, a mutated human bundling and elongin 16.61 may be a shortened human bundling and elongin 16.61 that lacks a signaling domain, although it can bind to downstream substrates, but lacks signaling. active. Recombinant gene therapy vectors can therefore be used to treat diseases caused by human bundling and elongation protein 16.61. Virus-derived expression vectors such as retrovirus, adenovirus, adenovirus-associated virus, herpes simplex virus, parvovirus, etc. can be used to transfer polynucleotides encoding human bunching and elongating proteins 16.61 into cells. Methods for constructing recombinant viral vectors carrying polynucleotides encoding human bundling and elongation proteins 16.61 can be found in existing literature (Sambrook, et al.). In addition, a polynucleotide encoding human bundling and elongation protein 16.61 can be packaged into liposomes and transferred into cells.
多核苷酸导入组织或细胞内的方法包括: 将多核苷酸直接注入到体内组织 中; 或在体外通过载体(如病毒、 噬菌体或质粒等)先将多核苷酸导入细胞中, 再将细胞移植到体内等。  Methods for introducing a polynucleotide into a tissue or cell include: directly injecting the polynucleotide into a tissue in vivo; or introducing the polynucleotide into a cell in vitro through a vector (such as a virus, phage, or plasmid), and then transplanting the cell Into the body and so on.
抑制人成束和延伸蛋白 16. 61 mRM的寡核苷酸(包括反义 RNA和 DM)以及 核酶也在本发明的范围之内。 核酶是一种能特异性分解特定 RNA 的酶样 RNA分 子, 其作用机制是核酶分子与互补的靶 RNA 特异性杂交后进行核酸内切作用。 反义的 RM和 DNA及核酶可用已有的任何 RNA或 DM合成技术获得, 如固相磷 酸酰胺化学合成法合成寡核苷酸的技术已广泛应用。 反义 RM 分子可通过编码 该 RNA 的 DNA序列在体外或体内转录获得。 这种 DM序列已整合到载体的 RNA 聚合酶启动子的下游。 为了增加核酸分子的稳定性, 可用多种方法对其进行修 饰, 如增加两侧的序列长度, 核糖核苷之间的连接应用磷酸硫酯键或肽键而非 磷酸二酯键。 Oligonucleotides (including antisense RNA and DM) and ribozymes that inhibit human bundling and elongation of 16.61 mRM are also within the scope of the present invention. A ribozyme is an enzyme-like RNA molecule that specifically decomposes specific RNA. Its mechanism of action is that the ribozyme molecule specifically hybridizes with a complementary target RNA for endonucleation. Antisense RM and DNA and ribozymes can be obtained using any existing RNA or DM synthesis techniques, such as solid phase phosphorus The technology of synthesizing oligonucleotides by acid amide chemical synthesis has been widely used. Antisense RM molecules can be obtained by in vitro or in vivo transcription of a DNA sequence encoding the RNA. This DM sequence has been integrated downstream of the vector's RNA polymerase promoter. In order to increase the stability of a nucleic acid molecule, it can be modified in a variety of ways, such as increasing the sequence length on both sides, and the ribonucleoside linkages should use phosphate thioester or peptide bonds instead of phosphodiester bonds.
编码人成束和延伸蛋白 16. 61的多核苷酸可用于与人成束和延伸蛋白 16. 61 的相关疾病的诊断。 编码人成束和延伸蛋白 16. 61 的多核苷酸可用于检测人成 束和延伸蛋白 16. 61 的表达与否或在疾病状态下人成束和延伸蛋白 16. 61 的异 常表达。 如编码人成束和延伸蛋白 16. 61 的 DNA序列可用于对活检标本进行杂 交以判断人成束和延伸蛋白 16. 61的表达状况。杂交技术包括 Southern印迹法, Nor thern 印迹法、 原位杂交等。 这些技术方法都是公开的成熟技术, 相关的试 剂盒都可从商业途径得到。 本发明的多核苷酸的一部分或全部可作为探针固定 在微阵列(Mi croarray)或 DM 芯片(又称为 "基因芯片" )上, 用于分析组织中 基因的差异表达分析和基因诊断。 用人成束和延伸蛋白 16. 61 特异的引物进行 RNA-聚合酶链反应(RT- PCR)体外扩增也可检测人成束和延伸蛋白 16. 61 的转录 产物。  The polynucleotide encoding human bundling and elongin 16.61 can be used for the diagnosis of diseases related to human bundling and elongin 16.61. The polynucleotide encoding human bundling and elongation protein 16.61 can be used to detect the expression of human bundling and elongation protein 16.61 or abnormal expression of human bundling and elongation protein 16.61 in a disease state. For example, DNA sequences encoding human bunching and elongation protein 16.61 can be used to hybridize biopsy specimens to determine the expression of human bunching and elongation protein 16.61. Hybridization techniques include Southern blotting, Nor thern blotting, and in situ hybridization. These techniques and methods are publicly available and mature, and the relevant kits are commercially available. A part or all of the polynucleotides of the present invention can be used as probes to be fixed on a micro array or a DM chip (also called a "gene chip") for analyzing differential expression analysis and gene diagnosis of genes in tissues. Human bundling and elongation 16.61 specific primers for RNA-polymerase chain reaction (RT-PCR) in vitro amplification can also detect human bundling and elongation 16.61 transcription products.
检测人成束和延伸蛋白 16. 61 基因的突变也可用于诊断人成束和延伸蛋白 16. 61 相关的疾病。 人成束和延伸蛋白 16. 61 突变的形式包括与正常野生型人 成束和延伸蛋白 16. 61 DNA 序列相比的点突变、 易位、 缺失、 重组和其它任何 异常等。 可用已有的技术如 Southern 印迹法、 DM序列分析、 PCR和原位杂交 检测突变。另外,突变有可能影响蛋白的表达, 因此用 Nor thern印迹法、 Wes tern 印迹法可间接判断基因有无突变。  Detection of mutations in human bundling and elongin 16.61 can also be used to diagnose human bundling and elongation 16.61-related diseases. Human bundling and elongation 16.61 mutations include point mutations, translocations, deletions, recombinations, and any other abnormalities compared to normal wild-type human bundling and elongation 16.61 DNA sequences. Mutations can be detected using existing techniques such as Southern blotting, DM sequence analysis, PCR and in situ hybridization. In addition, mutations may affect protein expression. Therefore, the Nor thern blotting and Western blotting can be used to indirectly determine whether a gene is mutated.
本发明的序列对染色体鉴定也是有价值的。 该序列会特异性地针对某条人 染色体具体位置且并可以与其杂交。 目前, 需要鉴定染色体上的各基因的具体 位点。 现在, 只有很少的基于实际序列数据(重复多态性)的染色体标记物可用 于标记染色体位置。 根据本发明, 为了将这些序列与疾病相关基因相关联, 其 重要的第一步就是将这些 DNA序列定位于染色体上。  The sequences of the invention are also valuable for chromosome identification. The sequence specifically targets a specific position on a human chromosome and can hybridize to it. Currently, specific sites for each gene on the chromosome need to be identified. Currently, only a few chromosome markers based on actual sequence data (repeating polymorphisms) are available for marking chromosome positions. According to the present invention, in order to associate these sequences with disease-related genes, an important first step is to locate these DNA sequences on a chromosome.
简而言之, 根据 cDM制备 PCR引物(优选 15-35bp) , 可以将序列定位于染色 体上。 然后, 将这些引物用于 PCR筛选含各条人染色体的体细胞杂合细胞。 只 有那些含有相应于引物的人基因的杂合细胞会产生扩增的片段。  In short, PCR primers (preferably 15-35bp) are prepared according to cDM, and the sequences can be located on chromosomes. These primers were then used for PCR screening of somatic hybrid cells containing individual human chromosomes. Only those heterozygous cells containing the human gene corresponding to the primer will produce amplified fragments.
体细胞杂合细胞的 PCR定位法, 是将 DNA定位到具体染色体的快捷方法。 使 用本发明的寡核苷酸引物, 通过类似方法, 可利用一组来自特定染色体的片段 或大量基因组克隆而实现亚定位。 可用于染色体定位的其它类似策略包括原位 杂交、 用标记的流式分选的染色体预筛选和杂交预选, 从而构建染色体特异的 cDNA库。 PCR localization of somatic hybrid cells is a quick way to localize DNA to specific chromosomes. Using the oligonucleotide primers of the present invention, by a similar method, a set of fragments from a specific chromosome can be utilized Or a large number of genomic clones to achieve sublocalization. Other similar strategies that can be used for chromosomal localization include in situ hybridization, chromosome pre-screening with labeled flow sorting, and hybrid pre-selection to construct chromosome-specific cDNA libraries.
将 cDM克隆与中期染色体进行荧光原位杂交(FISH) , 可以在一个步骤中精 确地进行染色体定位。 此技术的综述, 参见 Verma等, Human Chromosomes: a Manua l of Bas ic Techniques, Pergamon Pres s , New York (1988)。  Fluorescent in situ hybridization (FISH) of cDM clones with metaphase chromosomes allows precise chromosomal localization in one step. For a review of this technique, see Verma et al., Human Chromosomes: a Manu l of Basic Techniques, Pergamon Pres s, New York (1988).
一旦序列被定位到准确的染色体位置, 此序列在染色体上的物理位置就可 以与基因图数据相关联。 这些数据可见于例如, V. Mckus ick, Mende l ian Inher i tance in Man (可通过与 Johns Hopkins Univers i ty Welch Medi ca l Library联机获得)。 然后可通过连锁分析, 确定基因与业已定位到染色体区域 上的疾病之间的关系。  Once the sequence is located at the exact chromosomal location, the physical location of the sequence on the chromosome can be correlated with the genetic map data. These data can be found in, for example, V. Mckusick, Mendelian Inherance in Man (available online with Johns Hopkins University Welch Medical Library). Linkage analysis can then be used to determine the relationship between genes and diseases that have been mapped to chromosomal regions.
接着, 需要测定患病和未患病个体间的 cDNA或基因组序列差异。 如果在一 些或所有的患病个体中观察到某突变, 而该突变在任何正常个体中未观察到, 则该突变可能是疾病的病因。 比较患病和未患病个体, 通常涉及首先寻找染色 体中结构的变化, 如从染色体水平可见的或用基于 cDNA序列的 PCR可检测的缺 失或易位。 根据目前的物理作图和基因定位技术的分辨能力, 被精确定位至与 疾病有关的染色体区域的 cDNA, 可以是 50至 500个潜在致病基因间之一种(假定 Next, the difference in cDNA or genomic sequence between the affected and unaffected individuals needs to be determined. If a mutation is observed in some or all diseased individuals and the mutation is not observed in any normal individuals, the mutation may be the cause of the disease. Comparing affected and unaffected individuals usually involves first looking for structural changes in chromosomes, such as deletions or translocations that are visible at the chromosomal level or detectable with cDNA sequence-based PCR. Based on the resolution capabilities of current physical mapping and gene mapping technologies, cDNAs that are accurately mapped to disease-related chromosomal regions can be one of 50 to 500 potentially pathogenic genes (assuming
1兆碱基作图分辨能力和每 20kb对应于一个基因)。 1 megabase mapping capability and every 20kb corresponds to a gene).
可以将本发明的多肽、 多核苷酸及其模拟物、 激动剂、 拮抗剂和抑制剂与 合适的药物载体组合后使用。 这些载体可以是水、 葡萄糖、 乙醇、 盐类、 缓冲 液、 甘油以及它们的组合。 组合物包含安全有效量的多肽或拮抗剂以及不影响 药物效果的载体和赋形剂。 这些组合物可以作为药物用于疾病治疗。  The polypeptides, polynucleotides and mimetics, agonists, antagonists and inhibitors of the present invention can be used in combination with a suitable pharmaceutical carrier. These carriers can be water, glucose, ethanol, salts, buffers, glycerol, and combinations thereof. The composition comprises a safe and effective amount of the polypeptide or antagonist, and carriers and excipients which do not affect the effect of the drug. These compositions can be used as drugs for the treatment of diseases.
本发明还提供含有一种或多种容器的药盒或试剂盒, 容器中装有一种或多 种本发明的药用组合物成分。 与这些容器一起, 可以有由制造、 使用或销售药 品或生物制品的政府管理机构所给出的指示性提示, 该提示反映出生产、 使用 或销售的政府管理机构许可其在人体上施用。 此外, 本发明的多肽可以与其它 的治疗化合物结合使用。  The invention also provides a kit or kit containing one or more containers containing one or more ingredients of the pharmaceutical composition of the invention. Along with these containers, there may be instructional instructions given by government agencies that manufacture, use, or sell pharmaceuticals or biological products, which prompts permission for administration on the human body by government agencies that produce, use, or sell. In addition, the polypeptides of the invention can be used in combination with other therapeutic compounds.
药物组合物可以以方便的方式给药, 如通过局部、 静脉内、 腹膜内、 肌内、 皮下、 鼻内或皮内的给药途径。 人成束和延伸蛋白 16. 61 以有效地治疗和 /或预 防具体的适应症的量来给药。 施用于患者的人成束和延伸蛋白 16. 61 的量和剂 量范围将取决于许多因素, 如给药方式、 待治疗者的健康条件和诊断医生的判 断。  The pharmaceutical composition can be administered in a convenient manner, such as by a topical, intravenous, intraperitoneal, intramuscular, subcutaneous, intranasal or intradermal route of administration. Human bundling and elongin 16.61 are administered in amounts effective to treat and / or prevent specific indications. The amount and range of human bundling and elongin 16.61 administered to a patient will depend on many factors, such as the mode of administration, the health conditions of the person to be treated, and the judgment of the diagnostician.

Claims

权 利 要 求 书 Claim
1、 一种分离的多肽-人成束和延伸蛋白 16. 61 , 其特征在于它包含有: SEQ ID NO: 2所示的氨基酸序列的多肽、 或其多肽的活性片段、 类似物或衍生物。 1. An isolated polypeptide-human bundle and elongation protein 16.61, characterized in that it comprises: a polypeptide having the amino acid sequence shown in SEQ ID NO: 2, or an active fragment, analog, or derivative of the polypeptide .
2、 如权利要求 1 所述的多肽, 其特征在于所述多肽、 类似物或衍生物的氨基 酸序列具有与 SEQ ID NO: 2所示的氨基酸序列至少 95%的相同性。 2. The polypeptide according to claim 1, characterized in that the amino acid sequence of the polypeptide, analog or derivative has at least 95% identity with the amino acid sequence shown in SEQ ID NO: 2.
3、 如权利要求 2 所述的多肽, 其特征在于它包含具有 SEQ ID NO: 2 所示的氨 基酸序列的多肽。  3. The polypeptide according to claim 2, further comprising a polypeptide having an amino acid sequence represented by SEQ ID NO: 2.
4、 一种分离的多核苷酸, 其特征在于所述多核苷酸包含选自下组中的一种: (a) 编码具有 SEQ ID NO: 2所示氨基酸序列的多肽或其片段、 类似物、 衍生 物的多核苷酸;  4. An isolated polynucleotide, characterized in that said polynucleotide comprises one selected from the group consisting of: (a) encoding a polypeptide having an amino acid sequence shown in SEQ ID NO: 2 or a fragment thereof, an analog thereof; Polynucleotides of derivatives;
(b) 与多核苷酸 ) 互补的多核苷酸; 或  (b) a polynucleotide complementary to the polynucleotide; or
(c) 与 (a ) 或 (b ) 有至少 70%相同性的多核苷酸。  (c) A polynucleotide that is at least 70% identical to (a) or (b).
5、 如权利要求 4 所述的多核苷酸, 其特征在于所述多核苷酸包含编码具有 SEQ ID NO: 2所示氨基酸序列的多核苷酸。  5. The polynucleotide according to claim 4, wherein the polynucleotide comprises a polynucleotide encoding an amino acid sequence represented by SEQ ID NO: 2.
6、如权利要求 4所述的多核苷酸,其特征在于所述多核苷酸的序列包含有 SEQ ID NO: 1中 701-1156位的序列或 SEQ ID NO: 1中 1-1721位的序列。  6. The polynucleotide according to claim 4, characterized in that the sequence of the polynucleotide comprises a sequence at positions 701-1156 in SEQ ID NO: 1 or a sequence at positions 1-1721 in SEQ ID NO: 1. .
7、 一种含有外源多核苷酸的重组载体, 其特征在于它是由权利要求 4-6 中的 任一权利要求所述多核苷酸与质粒、 病毒或运载体表达载体构建而成的重组载 体。  7. A recombination vector containing an exogenous polynucleotide, characterized in that it is a recombination constructed by the polynucleotide according to any one of claims 4-6 and a plasmid, virus or a carrier expression vector Carrier.
8、 一种含有外源多核苷酸的遗传工程化宿主细胞, 其特征在于它是选自于下 列一种宿主细胞:  8. A genetically engineered host cell containing an exogenous polynucleotide, characterized in that it is selected from one of the following host cells:
(a) 用权利要求 7所述的重组载体转化或转导的宿主细胞; 或  (a) a host cell transformed or transduced with the recombinant vector of claim 7; or
(b) 用权利要求 4-6 中的任一权利要求所述多核苷酸转化或转导的宿主细 胞。  (b) a host cell transformed or transduced with a polynucleotide according to any one of claims 4-6.
9、 一种具有人成束和延伸蛋白 16. 61 活性的多肽的制备方法, 其特征在于所 述方法包括:  9. A method for preparing a polypeptide having human bundling and elongating protein 16.61 activity, characterized in that the method includes:
(a) 在表达人成束和延伸蛋白 16. 61条件下, 培养权利要求 8所述的工程化 宿主细胞;  (a) culturing the engineered host cell according to claim 8 under the condition of expressing human bunching and elongation protein 16.61;
(b) 从培养物中分离出具有人成束和延伸蛋白 16. 61活性的多肽。  (b) Isolating polypeptides with human bundling and elongation 16.61 activity from the culture.
1 0、 一种能与多肽结合的抗体,其特征在于所述抗体是能与人成束和延伸蛋白 16. 61特异性结合的抗体。 10. An antibody capable of binding to a polypeptide, characterized in that the antibody is an antibody capable of specifically binding to human bundle and elongation protein 16.61.
11、 一类模拟或调节多肽活性或表达的化合物, 其特征在于它们是模拟、 促进、 拮抗或抑制人成束和延伸蛋白 16. 61的活性的化合物。 11. A class of compounds that mimic or regulate the activity or expression of a polypeptide, characterized in that they are compounds that mimic, promote, antagonize or inhibit the activity of human bundling and elongation proteins 16.61.
12、 如权利要求 11 所述的化合物, 其特征在于它是 SEQ ID N0: 1 所示的多核 苷酸序列或其片段的反义序列。  12. The compound according to claim 11, characterized in that it is an antisense sequence of a polynucleotide sequence or a fragment thereof as shown in SEQ ID NO: 1.
13、 一种权利要求 11 所述化合物的应用, 其特征在于所述化合物用于调节人 成束和延伸蛋白 16. 61在体内、 体外活性的方法。 13. The use of the compound according to claim 11, characterized in that the compound is used for regulating the activity of human bundling and elongation protein 16.61 in vivo and in vitro.
14、 一种检测与权利要求 1-3 中的任一权利要求所述多肽相关的疾病或疾病易 感性的方法, 其特征在于其包括检测所述多肽的表达量, 或者检测所述多肽的 活性, 或者检测多核苷酸中引起所述多肽表达量或活性异常的核苷酸变异。  14. A method for detecting a disease or susceptibility to a disease associated with a polypeptide according to any one of claims 1-3, characterized in that it comprises detecting the expression level of the polypeptide, or detecting the activity of the polypeptide Or detecting a nucleotide variation in a polynucleotide that causes abnormal expression or activity of the polypeptide.
15、 如权利要求 1-3 中的任一权利要求所述多肽的应用, 其特征在于它应用于 筛选人成束和延伸蛋白 16. 61 的模拟物、 激动剂, 拮抗剂或抑制剂; 或者用于 肽指紋图谱鉴定。 15. Use of a polypeptide according to any one of claims 1-3, characterized in that it is used for screening mimics, agonists, antagonists or inhibitors of human bundling and elongation protein 16.61; or For identification of peptide fingerprints.
16、 如权利要求 4-6 中的任一权利要求所述的核酸分子的应用, 其特征在于它 作为引物用于核酸扩增反应, 或者作为探针用于杂交反应, 或者用于制造基因 芯片或微阵列。  16. The use of a nucleic acid molecule according to any one of claims 4-6, characterized in that it is used as a primer for a nucleic acid amplification reaction, or as a probe for a hybridization reaction, or for manufacturing a gene chip Or microarray.
17、 如权利要求 1-6 及 11 中的任一权利要求所述的多肽、 多核苷酸或化合物 的应用, 其特征在于用所述多肽、 多核苷酸或其模拟物、 激动剂、 拮抗剂或抑 制剂以安全有效剂量与药学上可接受的载体组成作为诊断或治疗与人成束和延 伸蛋白 16. 61异常相关的疾病的药物组合物。  17. Use of a polypeptide, polynucleotide or compound according to any one of claims 1-6 and 11, characterized in that the polypeptide, polynucleotide or mimetic, agonist, antagonist is used Or the inhibitor is composed of a safe and effective dose with a pharmaceutically acceptable carrier as a pharmaceutical composition for diagnosing or treating a disease associated with human bundling and elongation 16.61 abnormalities.
18、 杈利要求 1-6 及 11 中的任一权利要求所述的多肽、 多核苷酸或化合物的 应用, 其特征在于用所述多肽、 多核苷酸或化合物制备用于治疗如恶性肿瘤, 血液病, HIV感染和免疫性疾病和各类炎症的药物。 18. The use of the polypeptide, polynucleotide or compound according to any one of claims 1-6 and 11, characterized in that the polypeptide, polynucleotide or compound is used for preparing a treatment such as a malignant tumor, Hematological diseases, HIV infection and immune diseases and drugs of various inflammations.
PCT/CN2001/001022 2000-06-21 2001-06-19 A novel polypeptide - human fasciculation and elongation protein 16.61 and a polynucleotide encoding the same WO2002012311A1 (en)

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Non-Patent Citations (2)

* Cited by examiner, † Cited by third party
Title
J. CELL BIOL., vol. 144, no. 3, 1999, pages 403 - 411 *
PROC. NATL. ACAD. SCI. USA, vol. 94, no. 7, 1997, pages 3414 - 3419 *

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