WO2001040299A1 - A novel polypeptide - human prolipoprotein signal peptide 14 and a polynucleotide encoding the same - Google Patents

A novel polypeptide - human prolipoprotein signal peptide 14 and a polynucleotide encoding the same Download PDF

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Publication number
WO2001040299A1
WO2001040299A1 PCT/CN2000/000514 CN0000514W WO0140299A1 WO 2001040299 A1 WO2001040299 A1 WO 2001040299A1 CN 0000514 W CN0000514 W CN 0000514W WO 0140299 A1 WO0140299 A1 WO 0140299A1
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Prior art keywords
polypeptide
polynucleotide
signal peptide
precursor protein
protein signal
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PCT/CN2000/000514
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French (fr)
Chinese (zh)
Inventor
Yumin Mao
Yi Xie
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Bioroad Gene Development Ltd. Shanghai
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Priority to AU16895/01A priority Critical patent/AU1689501A/en
Publication of WO2001040299A1 publication Critical patent/WO2001040299A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/46Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates
    • C07K14/47Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates from mammals
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides

Definitions

  • the present invention belongs to the field of biotechnology. Specifically, the present invention describes a new polypeptide, a human lipoprotein precursor protein signal peptide 14, and a polynucleotide sequence encoding the polypeptide. The invention also relates to a preparation method and application of the polynucleotide and polypeptide. Background technique
  • Lipoproteins are a class of binding proteins composed of proteins and various fatty acids and steroids. Proteins and steroids are bound together by weak non-covalent bonds, while other lipoproteins are bound by proteins and lipids by covalent bonds. Lipoproteins can be divided into three categories based on their protein composition, nuclear proteins ( (Such as thrombin to live enzymes), phosphoproteins (such as lipophosphoproteins in yolk), and simple proteins (such as plasma lipoproteins and brain proteolipids). The role of lipoproteins in the body is very important. For example, part of the lipids in the blood is transmitted by plasma lipoproteins
  • Covalent modification of lipids to membrane proteins is a common phenomenon in cells.
  • the proteins at the cell membrane are all lipoproteins. They interact with the phospholipid layer of the cell membrane to form a membrane structure.
  • membrane lipoprotein synthesis and modification are more clearly studied in prokaryotes.
  • membrane lipoproteins are first synthesized as a protein precursor.
  • the N-terminus of this precursor protein contains a signal peptide.
  • two processes of modification of the N-terminal cysteine and removal of the signal peptide occur successively. This process takes place in a conservative area.
  • the signal peptide of a protein that has not undergone lipid modification will not have this conserved sequence. It appears that this conserved sequence is a sorting signal for whether the mature protein is lipid-modified or not.
  • signal peptidase II recognizes a conserved sequence on the signal peptide and cleaves the upstream segment of the cysteine residue connected to the glycerolipid-fatty acid lipid. This conserved sequence is:
  • apolipoprotein is associated with Alzheimer's disease.
  • High-density lipoprotein can remove excess cholesterol present in the brain and keep the starch mass at a normal level. Abnormal expression of this type of lipoprotein causes Alzheimer's disease, cholesterol deposits in the brain, and brain tumors.
  • liver diseases such as exogenous / endogenous lipidemia, familial hypercholesterolemia, cholesterol storage disease, fatty liver, etc. Severe fatty liver can also cause liver cancer. Lipoprotein anabolic disorders can also cause diseases such as coronary heart disease.
  • the polypeptide of the present invention contains a lipid-binding site of a membrane lipoprotein precursor signal peptide, and analysis of the expression profile indicates that the content of sub-peptide in liver cancer cells is lower than that in normal liver tissue, indicating that it is related to liver cancer and membrane lipids.
  • the function of the protein precursor signal peptide is consistent.
  • the present invention is a novel human lipoprotein precursor protein signal peptide, which has similar biological functions. And named as human lipoprotein precursor protein signal peptide 14.
  • the human lipoprotein precursor protein signal peptide 14 protein plays an important role in important body functions as described above, and it is believed that a large number of proteins are involved in these regulatory processes, there has been a need in the art to identify more human lipoproteins involved in these processes.
  • Precursor protein signal peptide 14 protein especially the amino acid sequence of this protein is identified. Isolation of the new human lipoprotein precursor protein signal peptide 14 protein encoding gene also provides a basis for research to determine the role of this protein in health and disease states. This protein may form the basis for developing diagnostic and / or therapeutic drugs, so isolating its coding DNA is important. It is an object of the present invention to provide isolated novel polypeptides-human lipoprotein precursor protein signal peptide 14 and fragments, analogs and derivatives thereof.
  • Another object of the invention is to provide a polynucleotide encoding the polypeptide.
  • Another object of the present invention is to provide a recombinant vector containing a polynucleotide encoding a human lipoprotein precursor protein signal peptide 14.
  • Another object of the present invention is to provide a method for producing a human lipoprotein precursor protein signal peptide 14.
  • Another object of the present invention is to provide an antibody against the polypeptide-human lipoprotein precursor protein signal peptide 14 of the present invention.
  • Another object of the present invention is to provide mimic compounds, antagonists, agonists, and inhibitors directed to the polypeptide of the present invention-human lipoprotein precursor protein signal peptide 14.
  • Another object of the present invention is to provide a method for diagnosing and treating diseases associated with abnormalities of the human lipoprotein precursor protein signal peptide 14.
  • the present invention relates to an isolated polypeptide.
  • the polypeptide is of human origin and comprises: SEQ ID No. 2 Amino acid sequence of a polypeptide, or a conservative variant, biologically active fragment or derivative thereof.
  • the polypeptide is a polypeptide having the amino acid sequence of SEQ ID NO: 2.
  • the invention also relates to an isolated polynucleotide comprising a nucleotide sequence or a variant thereof selected from the group consisting of:
  • sequence of the polynucleotide is one selected from the group consisting of: (a) a sequence having positions 619-1038 in SEQ ID NO: 1; and (b) having a sequence of 1-2572 in SEQ ID NO: 1 Sequence of bits.
  • the invention further relates to a vector, in particular an expression vector, containing the polynucleotide of the invention; a host cell genetically engineered with the vector, including a transformed, transduced or transfected host cell; and a method comprising culturing said Host cell and method of preparing the polypeptide of the present invention by recovering the expression product.
  • a vector in particular an expression vector, containing the polynucleotide of the invention
  • a host cell genetically engineered with the vector including a transformed, transduced or transfected host cell
  • a method comprising culturing said Host cell and method of preparing the polypeptide of the present invention by recovering the expression product.
  • the invention also relates to an antibody capable of specifically binding to a polypeptide of the invention.
  • the invention also relates to a method for screening compounds that mimic, activate, antagonize or inhibit the activity of human lipoprotein precursor protein signal peptide 14 protein, which comprises utilizing the polypeptide of the invention.
  • the invention also relates to compounds obtained by this method.
  • the invention also relates to a method for in vitro detection of a disease or susceptibility to disease associated with abnormal expression of a human lipoprotein precursor protein signal peptide 14 protein, comprising detecting mutations in the polypeptide or a polynucleotide sequence encoding the same in a biological sample, Alternatively, the amount or biological activity of a polypeptide of the invention in a biological sample is detected.
  • the invention also relates to a pharmaceutical composition
  • a pharmaceutical composition comprising a polypeptide of the invention or a mimetic thereof, an activator, an antagonist or an inhibitor, and a pharmaceutically acceptable carrier.
  • the present invention also relates to the use of the polypeptide and / or polynucleotide of the present invention in the preparation of a medicament for treating cancer, developmental disease or immune disease or other diseases caused by abnormal expression of human lipoprotein precursor protein signal peptide 14.
  • Nucleic acid sequence refers to an oligonucleotide, a nucleotide or a polynucleotide and a fragment or part thereof, and may also refer to a genomic or synthetic DNA or RNA, they can be single-stranded or double-stranded, representing the sense or antisense strand.
  • amino acid sequence refers to an oligopeptide, peptide, polypeptide or protein sequence and fragments or portions thereof.
  • amino acid sequence in the present invention relates to the amino acid sequence of a naturally occurring protein molecule
  • this "multiple "Peptide” or “protein” is not meant to limit the amino acid sequence to the complete natural amino acid associated with the protein molecule.
  • a protein or polynucleotide “variant” refers to an amino acid sequence having one or more amino acids or nucleotide changes or a polynucleotide sequence encoding it. The changes may include deletions, insertions or substitutions of amino acids or nucleotides in the amino acid sequence or nucleotide sequence. Variants can have "conservative" changes in which the substituted amino acid has a structural or chemical property similar to the original amino acid, such as the replacement of isoleucine with leucine. Variants can also have non-conservative changes, such as replacing glycine with tryptophan.
  • “Deletion” refers to the deletion of one or more amino acids or nucleotides in an amino acid sequence or nucleotide sequence.
  • Insertion refers to an alteration in the amino acid sequence or nucleotide sequence that results in an increase in one or more amino acids or nucleotides compared to a naturally occurring molecule.
  • Replacement refers to the replacement of one or more amino acids or nucleotides with different amino acids or nucleotides.
  • Bioactivity refers to proteins with the structural, regulatory, or biochemical functions of natural molecules.
  • immunologically active refers to natural, recombinant, or synthetic proteins and fragments thereof in suitable animals or cells The ability to induce specific immune responses and to bind specific antibodies.
  • An "agonist” refers to a molecule that, when combined with a human lipoprotein precursor protein signal peptide 14, can cause the protein to change, thereby regulating the activity of the protein.
  • An agonist may include a protein, a nucleic acid, a carbohydrate, or any other molecule that can bind the human lipoprotein precursor protein signal peptide 14.
  • Antagonist refers to a molecule that can block or regulate the biological or immunological activity of human lipoprotein precursor protein signal peptide 14 when combined with human lipoprotein precursor protein signal peptide 14.
  • Antagonists and inhibitors may include proteins, nucleic acids, carbohydrates, or any other molecule that can bind to human lipoprotein precursor protein signal peptide 14.
  • “Regulation” refers to a change in the function of human lipoprotein precursor protein signal peptide 14, including an increase or decrease in protein activity, a change in binding characteristics, and any other biological properties and functions of human lipoprotein precursor protein signal peptide 14. Or changes in immune properties.
  • substantially pure ' means substantially free of other proteins, lipids, carbohydrates or other substances naturally associated with it.
  • Those skilled in the art can purify the human lipoprotein precursor protein signal peptide 14 using standard protein purification techniques, _, Basically pure human lipoprotein precursor protein signal peptide 14 can produce a single main band of human lipoprotein precursor protein signal peptide 14 on a non-reducing polyacrylamide gel. The purity of the polypeptide can be analyzed by amino acid sequence.
  • Complementary refers to polynucleotides that naturally bind through base-pairing under conditions of acceptable salt concentration and temperature.
  • sequence "CT-G-A” can be combined with the complementary sequence "G-A-CT”.
  • the complementarity between two single-stranded molecules may be partial or complete.
  • the degree of complementarity between nucleic acid strands The efficiency and intensity of hybridization have a significant effect.
  • “Homology” refers to the degree of complementarity and can be partially homologous or completely homologous.
  • Partial homology refers to a partially complementary sequence that at least partially inhibits hybridization of a fully complementary sequence to a target nucleic acid. This inhibition of hybridization can be detected by performing hybridization (Southern blotting or Nor thern blotting, etc.) under conditions of reduced stringency.
  • Substantially homologous sequences or hybridization probes can compete and inhibit the binding of completely homologous sequences to the target sequence under conditions of reduced stringency. This does not mean that the conditions of reduced stringency allow non-specific binding, because the conditions of reduced stringency require that the two sequences bind to each other specifically or selectively.
  • Percent identity refers to the percentage of sequences that are the same or similar in the comparison of two or more amino acid or nucleic acid sequences. The percent identity can be determined electronically, such as through the MEGALIGN program (Lasergene sof tware package, DNASTAR, Inc., Madi son Wis.). The MEGALIGN program can compare two or more sequences according to different methods such as the Cluster method (Higgins, D. G. and P. M. Sharp (1988) Gene 73: 237-244). The C l uster method arranges each group of sequences into clusters by checking the distance between all pairs. The clusters are then assigned in pairs or groups. The percent identity between two amino acid sequences such as sequence A and sequence B is calculated by the following formula: The number of matching residues between sequence A and sequence B
  • the percent identity between nucleic acid sequences can also be determined by the Cluster method or by methods known in the art such as Jotun He in (He in J., (1990) Methods in emzumo logy 183: 625-645).
  • Similarity refers to the degree of identical or conservative substitutions of amino acid residues at corresponding positions in the alignment of amino acid sequences.
  • Amino acids used for conservative substitutions for example, negatively charged amino acids may include aspartic acid and glutamic acid; positively charged amino acids may include lysine and arginine; having an uncharged head group is Similar hydrophilic amino acids may include leucine, isoleucine and valine; glycine and alanine; asparagine and glutamine; serine and threonine; phenylalanine and tyrosine.
  • Antisense refers to a nucleotide sequence that is complementary to a particular DNA or RNA sequence.
  • Antisense strand refers to a nucleic acid strand that is complementary to the “sense strand”.
  • Derivative refers to a chemical modification of HFP or a nucleic acid encoding it. Such a chemical modification may be the replacement of a hydrogen atom with an alkyl group, an acyl group or an amino group. Nucleic acid derivatives can encode polypeptides that retain the main biological characteristics of natural molecules.
  • Antibody refers to a complete antibody molecule and its fragments, such as Fa,? ( ⁇ ') 2 and? Which can specifically bind The epitope of human lipoprotein precursor protein signal peptide 14.
  • a “humanized antibody” refers to an antibody in which the amino acid sequence of a non-antigen binding region is replaced to become more similar to a human antibody, but still retains the original binding activity.
  • isolated refers to the removal of a substance from its original environment (for example, its natural environment if it occurs naturally).
  • a naturally occurring polynucleotide or polypeptide is not isolated when it is present in a living animal, but the same polynucleotide or polypeptide is separated from some or all of the substances that coexist with it in the natural system.
  • Such a polynucleotide may be part of a vector, or such a polynucleotide or polypeptide may be part of a composition. Since the carrier or composition is not part of its natural environment, they are still isolated.
  • isolated refers to the separation of a substance from its original environment (if it is a natural substance, the original environment is the natural environment).
  • polynucleotides and polypeptides in a natural state in a living cell are not isolated and purified, but the same polynucleotides or polypeptides are separated and purified if they are separated from other substances existing in the natural state. .
  • isolated human lipoprotein precursor protein signal peptide 14 means that human lipoprotein precursor protein signal peptide 14 is substantially free of other proteins, lipids, carbohydrates, or other substances with which it is naturally associated. Those skilled in the art can purify the human lipoprotein precursor protein signal peptide 14 using standard protein purification techniques. Substantially pure polypeptides can produce a single main band on a non-reducing polyacrylamide gel. The purity of human lipoprotein precursor protein signal peptide 14 polypeptide can be analyzed by amino acid sequence.
  • the present invention provides a new polypeptide, a human lipoprotein precursor protein signal peptide 14, which is basically composed of the amino acid sequence shown in SEQ ID NO: 2.
  • the polypeptide of the present invention may be a recombinant polypeptide, a natural polypeptide, or a synthetic polypeptide, and preferably a recombinant polypeptide.
  • the polypeptides of the present invention can be naturally purified products or chemically synthesized products, or can be produced from prokaryotic or eukaryotic hosts (eg, bacteria, yeast, higher plants, insects, and mammalian cells) using recombinant techniques.
  • polypeptide of the invention may be glycosylated, or it may be non-glycosylated.
  • the polypeptides of the invention may also include or exclude the initial methionine residue.
  • the present invention also includes fragments, derivatives, and analogs of the human lipoprotein precursor protein signal peptide 14.
  • fragment means substantially maintaining the present invention Human lipoprotein precursor protein signal peptide 14 A polypeptide with the same biological function or activity.
  • a fragment, derivative or analog of the polypeptide of the present invention may be: (I) a kind in which one or more amino acid residues are substituted with conservative or non-conservative amino acid residues (preferably conservative amino acid residues), and the substitution The amino acid may or may not be encoded by the genetic codon; or ( ⁇ ) a type in which one or more amino acid residues A certain group is substituted by another group to include a substituent; or (III) is one in which the fused polypeptide is fused to another compound (such as a compound that extends the half-life of the polypeptide, such as polyethylene glycol); or (IV) A polypeptide sequence (such as a leader sequence or a secreted sequence or a sequence used to purify this polypeptide or a protease sequence) formed by fusing additional amino acid sequences into a mature polypeptide.
  • a polypeptide sequence such as a leader sequence or a secreted sequence or a sequence used to purify this polypeptide or a protease
  • the present invention provides an isolated nucleic acid (polynucleotide), which basically consists of a polynucleotide encoding a polypeptide having the amino acid sequence of SEQ ID NO: 2.
  • the polynucleotide sequence of the present invention includes the nucleotide sequence of SEQ ID NO: 1.
  • the polynucleotide of the present invention is found from a cDNA library of human fetal brain tissue. It contains a polynucleotide sequence with a total length of 2572 bases, and its open reading frame (6191038) encodes 139 amino acids.
  • This polypeptide has a characteristic sequence of a membrane lipoprotein lipid binding site, and it can be deduced that the human lipoprotein precursor protein signal peptide 14 has a structure and function represented by a membrane lipoprotein lipid binding site.
  • the polynucleotide of the present invention may be in the form of DNA or RNA.
  • DNA forms include cDNA, genomic DNA, or synthetic DNA.
  • DNA can be single-stranded or double-stranded.
  • DNA can be coding or non-coding.
  • the coding region sequence encoding the mature polypeptide may be the same as the coding region sequence shown in SEQ ID NO: 1 or it may be a degenerate variant.
  • a "degenerate variant" refers to a nucleic acid sequence encoding a protein or polypeptide having SEQ ID NO: 2 but different from the coding region sequence shown in SEQ ID NO: 1 in the present invention.
  • the polynucleotide encoding the mature polypeptide of SEQ ID NO: 2 includes: only the coding sequence of the mature polypeptide; the coding sequence of the mature polypeptide and various additional coding sequences; the coding sequence of the mature polypeptide (and optional additional coding sequences); Coding sequence.
  • polynucleotide encoding a polypeptide refers to a polynucleotide that includes the polypeptide and a polynucleotide that includes additional coding and / or non-coding sequences.
  • the invention also relates to variants of the polynucleotides described above, which encode polypeptides or fragments, analogs and derivatives of polypeptides having the same amino acid sequence as the invention.
  • This polynucleotide variant can be a naturally occurring allelic variant or a non-naturally occurring variant.
  • These nucleotide variants include substitution variants, deletion variants, and insertion variants.
  • an allelic variant is an alternative form of a polynucleotide that may be a substitution, deletion, or insertion of one or more nucleotides, but does not substantially change the function of the polypeptide it encodes .
  • the invention also relates to a polynucleotide that hybridizes to the sequence described above (having at least 50%, preferably 70% identity between the two sequences).
  • the invention particularly relates to polynucleotides that can hybridize to the polynucleotides of the invention under stringent conditions.
  • “strict conditions” means: (1) hybridization and elution at lower ionic strength and higher temperature, such as 0.2xSSC, 0.1% SDS, 6 (TC; or (2) Add denaturants during hybridization, such as 50% (v / v) formamide, 0.1% calf serum / 0.1% F i co ll, 42 ° C, etc .; or (3) only between the two sequences Between Hybridization occurs only when the identity is at least 95%, and more preferably 97%.
  • the polypeptide encoded by the hybridizable polynucleotide has the same biological function and activity as the mature polypeptide shown in SEQ ID NO: 2.
  • nucleic acid fragments that hybridize to the sequences described above.
  • a "nucleic acid fragment” contains at least 10 nucleotides in length, preferably at least 20-30 nucleotides, more preferably at least 50-60 nucleotides, and most preferably at least 100 nuclei. Glycylic acid or more. Nucleic acid fragments can also be used in nucleic acid amplification techniques, such as PCR, to identify and / or isolate polynucleotides encoding human lipoprotein precursor protein signal peptide 14.
  • polypeptides and polynucleotides in the present invention are preferably provided in an isolated form and are more preferably purified to homogeneity.
  • the specific polynucleotide sequence encoding the human lipoprotein precursor protein signal peptide 14 of the present invention can be obtained by various methods.
  • polynucleotides are isolated using hybridization techniques well known in the art. These techniques include, but are not limited to: 1) hybridization of probes to genomic or cDNA libraries to detect homologous polynucleotide sequences, and 2) antibody screening of expression libraries to detect cloned polynucleosides with common structural characteristics Acid fragments.
  • the DM fragment sequence of the present invention can also be obtained by the following methods: 1) isolating the double-stranded DNA sequence from the genomic DNA; 2) chemically synthesizing the DM sequence to obtain the double-stranded DNA of the polypeptide.
  • genomic DNA isolation is the least commonly used. Direct chemical synthesis of DNA sequences is often the method of choice. The more commonly used method is the isolation of cDNA sequences.
  • the standard method for isolating the cDNA of interest is to isolate mRNA from donor cells that overexpress the gene and perform reverse transcription to form a plasmid or phage cDNA library.
  • Various methods have been developed for mRNA extraction, and kits are also commercially available (Q i agene).
  • the construction of cDNA libraries is also a common method (Sambrook, et al., Moleculiar Cling, A Labora tory Manual, Coldspring Harbor Laboraty. New York, 1989).
  • Commercially available cDNA libraries are also available, such as different cDNA libraries from Cloieitech. When polymerase reaction technology is used in combination, even very small expression products can be cloned.
  • genes of the present invention can be selected from these cDNA libraries by conventional methods. These methods include (but are not limited to): (l) DNA-DM or DM-RNA hybridization; (2) the appearance or loss of marker gene function; (3) determination of the level of transcript of human lipoprotein precursor protein signal peptide 14 (4) Detecting protein products expressed by genes through immunological techniques or measuring biological activity. The above methods can be used alone or in combination.
  • the probe used for hybridization is homologous to any part of the polynucleotide of the present invention, and its length is at least 10 nucleotides, preferably at least 30 nucleotides, more preferably At least 50 nucleotides, preferably at least 100 nucleotides. In addition, the length of the probe is usually within 2,000 nucleotides, preferably within 1 000 nucleotides.
  • the probe used here is generally a DM sequence chemically synthesized based on the gene sequence information of the present invention. The genes or fragments of the present invention can of course be used as probes. DNA probes can be labeled with radioisotopes, luciferin, or enzymes (such as alkaline phosphatase). In the (4) method, immunological techniques such as Western blotting, radioimmunoprecipitation, and enzyme-linked immunosorbent assay (ELISA) can be used to detect the protein product of the human lipoprotein precursor protein signal peptide 14 gene expression.
  • a method of applying a PCR technique to amplify DNA / RNA is preferably used to obtain the gene of the present invention.
  • the RACE method RACE-Rapid Amplification of cDNA Ends
  • the primers used for PCR can be appropriately based on the polynucleotide sequence information of the present invention disclosed herein. Select and synthesize using conventional methods.
  • the amplified DNA / RNA fragments can be isolated and purified by conventional methods such as by gel electrophoresis.
  • polynucleotide sequence of the gene of the present invention or various DNA fragments and the like obtained as described above can be determined by a conventional method such as dideoxy chain termination method (Sanger et al. PNAS, 1977, 74: 5463-5467). Such polynucleotide sequences can also be determined using commercial sequencing kits and the like. In order to obtain the full-length cDNA sequence, the sequencing must be repeated. Sometimes it is necessary to determine the cDNA sequence of multiple clones in order to splice into a full-length cDNA sequence.
  • the present invention also relates to a vector comprising the polynucleotide of the present invention, and a host cell that is genetically engineered using the vector of the present invention or directly using the human lipoprotein precursor protein signal peptide 14 coding sequence, and that recombinant technology is used to produce the present invention.
  • Polypeptide method comprising the polynucleotide of the present invention, and a host cell that is genetically engineered using the vector of the present invention or directly using the human lipoprotein precursor protein signal peptide 14 coding sequence, and that recombinant technology is used to produce the present invention. Polypeptide method.
  • a polynucleotide sequence encoding the human lipoprotein precursor protein signal peptide 14 can be inserted into a vector to constitute a recombinant vector containing the polynucleotide of the present invention.
  • vector refers to bacterial plasmids, phages, yeast plasmids, plant cell viruses, mammalian cell viruses such as adenoviruses, retroviruses, or other vectors well known in the art.
  • Vectors suitable for use in the present invention include, but are not limited to: T7 promoter-based expression vectors expressed in bacteria (Rosenberg, et al.
  • any plasmid and vector can be used to construct a recombinant expression vector.
  • An important feature of expression vectors is that they usually contain an origin of replication, a promoter, a marker gene, and translational regulatory elements.
  • PL promoter eukaryotic promoters include CMV immediate early promoter, HSV thymidine kinase promoter, early and late SV40 promoters, retroviral LTRs and other known controllable genes in prokaryotic cells or Promoters expressed in eukaryotic cells or their viruses.
  • the expression vector also includes a ribosome binding site for translation initiation and a transcription terminator. Insertion of enhancer sequences into the vector will enhance its transcription in higher eukaryotic cells. Enhancers are cis-acting factors for DNA expression, usually about 10 to 300 base pairs, which act on promoters to enhance gene transcription. Illustrative examples include SV40 enhancers of 100 to 270 base pairs on the late side of the origin of replication, tumorigenic enhancers on the late side of the origin of replication, and adenoviral enhancers.
  • the expression vector preferably contains one or more selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as dihydrofolate reductase, neomycin resistance, and green for eukaryotic cell culture.
  • selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as dihydrofolate reductase, neomycin resistance, and green for eukaryotic cell culture.
  • GFP fluorescent protein
  • tetracycline or ampicillin resistance for E. coli.
  • the polynucleotide encoding the human lipoprotein precursor protein signal peptide 14 or a recombinant vector containing the polynucleotide can be transformed or transduced into a host cell to form a genetically engineered host containing the polynucleotide or the recombinant vector.
  • the term "host cell” refers to a prokaryotic cell, such as a bacterial cell; or a lower eukaryotic cell, such as a yeast cell; or a higher eukaryotic cell, such as a mammalian cell. Representative examples are: E.
  • Transforming a host cell with the DNA sequence of the present invention or a recombinant vector containing the DNA sequence can be performed by conventional techniques well known to those skilled in the art.
  • the host is a prokaryote such as E. coli
  • competent cells capable of absorbing DNA can be harvested after the exponential growth phase and treated with CaC I.
  • the steps used are well known in the art.
  • the alternative is to use MgC l 2 .
  • transformation can also be performed by electroporation.
  • the following DNA transfection methods can be used: calcium phosphate co-precipitation method, or conventional mechanical methods such as microinjection, electroporation, and liposome packaging.
  • the polynucleotide sequence of the present invention can be used to express or produce a recombinant human lipoprotein precursor protein signal peptide 14 (Scence, 1984; 224: 1431). Generally, the following steps are taken:
  • step (3) Isolate and purify protein from culture medium or cells.
  • the medium used in the culture may be selected from various conventional mediums. Culture is performed under conditions suitable for host cell growth. After the host cells have grown to an appropriate cell density, the selected promoter is induced by a suitable method (such as temperature conversion or chemical induction), and the cells are cultured for a period of time.
  • the recombinant polypeptide may be coated in a cell, expressed on a cell membrane, or secreted outside the cell.
  • recombinant proteins can be separated and purified by various separation methods using their physical, chemical and other properties. These methods are well known to those skilled in the art. These methods include, but are not limited to: conventional renaturation treatment, protein precipitant treatment (salting out method), centrifugation, osmotic disruption, ultrasonic treatment, ultracentrifugation, molecular sieve chromatography (gel filtration), adsorption chromatography, ion Exchange chromatography, high performance liquid chromatography (HPLC) and various other liquid chromatography techniques and combinations of these methods.
  • conventional renaturation treatment protein precipitant treatment (salting out method), centrifugation, osmotic disruption, ultrasonic treatment, ultracentrifugation, molecular sieve chromatography (gel filtration), adsorption chromatography, ion Exchange chromatography, high performance liquid chromatography
  • Figure 1 shows the polyacrylamide gel electrophoresis (SDS-PAGE) of the isolated human lipoprotein precursor protein signal peptide 14. 14kDa is the molecular weight of the protein. The arrow indicates the isolated protein band. The best way to implement the invention
  • poly (A) mRNA is reverse transcribed to form cDNA.
  • a Smart cDNA cloning kit (purchased from Clontech) was used to orient the cDNA fragment into the multiple cloning site of the pBSK (+.) Vector (Clontech) to transform DH5a. The bacteria formed a cDNA library.
  • Dye terminate cycle reaction ion sequencing kit (Perkin-Elmer) and ABI 377 automatic sequencer (Perkin-Elmer) were used to determine the sequences at the 5 'and 3' ends of all clones.
  • the determined cDNA sequence was compared with the existing public DM sequence database (Genebank), and it was found that the cDNA sequence of one of the clones 0558e09 was new DNA. Insert a cDNA fragment into the clone by synthesizing a series of primers Segments are measured in both directions. The results showed that the 0558e09 clone contained a full-length cDNA of 2572bp (as shown in Seq IDN0: 1), and a 139bp open reading frame (0RF) from 619bp to 1038bp, encoding a new protein (such as Seq ID NO: 2). We named this clone pBS-0558e09 and the encoded protein was named human lipoprotein precursor protein signal peptide 14.
  • Example 2 Cloning of a gene encoding human lipoprotein precursor protein signal peptide 14 by RT-PCR
  • CDNA was synthesized using fetal brain total RNA as a template and oligo-dT as a primer.
  • PCR amplification was performed with the following primers:
  • Primer 1 5'_GGAAAAATTTCTGTACATTTTCTCAA- 3 '(SEQ ID NO: 3)
  • Primer2 5,-GAGGAAACATAATCTGTATTTCAGTT- 3 '(SEQ ID NO: 4)
  • Primerl is a forward sequence starting at lbp at the 5 'end of SEQ ID NO: 1;
  • Primer 2 is the 3 'end reverse sequence in SEQ ID NO: 1.
  • Amplification reaction conditions 50 ⁇ l of KC1, 10 mmol / L Tris-CI, (pH 8.5), 1.5 mmol / L MgCl 2 , 200 ⁇ mol / L dNTP, lOpmol primers in a 50 ⁇ 1 reaction volume , 1U Taq DNA polymerase (Clontech).
  • the reaction was performed on a PE9600 DNA thermal cycler (Perkin-Elmer) for 25 cycles under the following conditions: 94. C 30sec; 55 ° C 30sec; 72 ° C 2min.
  • ⁇ -act in was set as a positive control and template blank was set as a negative control.
  • the amplified product was purified using a QIAGEN kit, and ligated to a pCR vector (Invitrogen product) using a TA cloning kit.
  • the DNA sequence analysis results showed that the DNA sequence of the PCR product was exactly the same as that of 1-2572bp shown in SEQ ID NO: 1.
  • Example 3 Northern blot analysis of human lipoprotein precursor protein signal peptide 14 gene expression:
  • This method involves acid guanidinium thiocyanate-chloroform extraction. I.e. with 4M guanidinium isothiocyanate -25mM sodium citrate, 0.2M sodium acetate (P H4.0) of the tissue was homogenized phenol, 1 volume and 1/5 volume of chloroform - isoamyl alcohol (49: 1) Centrifuge after mixing. The aqueous layer was aspirated, isopropanol (0.8 vol) was added and the mixture was centrifuged to obtain RM precipitate. The resulting RNA pellet was washed with 70% ethanol, dried and dissolved in water.
  • RNA probes were the human lipoprotein precursor protein signal peptide 14 coding region sequence (619bp to 1038bp) amplified by PCR.
  • a 32P-labeled probe (approximately 2 x 10 6 cpm / ml) and an RNA-transferred nitrocellulose membrane were placed in a solution at 42 ° C. C hybridization overnight, this solution contains 50. /. Formamide-25mM KH 2 P0 4 (pH7.4) -5 xSSC- 5 xDenhardt's solution and 20 ( ⁇ g / ml salmon sperm DNA. After hybridization, the filter was set at 1 ⁇ SSC- 0.1. /. Wash in SDS at 55 ° C for 30 min. Then, Phosphor Imager was used for analysis and quantification.
  • Example 4 In vitro expression, isolation and purification of recombinant human lipoprotein precursor protein signal peptide 14
  • Primer 3 5'- CCCCATATGATAGCTATCATGTGTTTGAATCAGA- 3 '(Seq ID No: 5)
  • Primer4 5'- CCCGGATCCTCAGCATTCACAAAGGCAGCCAACC- 3' (Seq ID No: 6)
  • the 5 ′ ends of these two primers contain Ndel and BamHI digestion sites, respectively, followed by the coding sequences of the 5 ′ end and the end of the target gene, respectively.
  • the Ndel and BamHI digestion sites correspond to the expression vector Selective endonuclease site on plasmid pET-28b (+) (Novagen, Cat. No. 69865.3).
  • PCR was performed using the pBS-0558e09 plasmid containing the full-length target gene as a template.
  • the PCR reaction conditions were as follows: a total volume of 50 ⁇ 1 containing 10 pg of P BS_0558e09 plasmid, primers Primer-3 and Primer- 4 points, and 1 J for lpmol, Advantage polymerase Mix
  • Cycle parameters 94 ° C 20s, 60 ° C 30s, 68 ° C 2 min, a total of 25 cycles.
  • Ndel and BamHI were used to double-digest the amplified product and plasmid pET-28 (+), respectively, and large fragments were recovered and ligated with T4 ligase.
  • the ligation product was transformed into Ca. bacillus DH5a by the calcium chloride method.
  • NH 2 -Met-Cys-Leu-Asn-Gln-Arg-Phe-Glu-Leu-Tyr-Tyr-Leu-Glu-Asn-Asp- C00H (SEQ ID NO: 7).
  • the polypeptide is coupled to hemocyanin and bovine serum albumin to form a complex, respectively.
  • hemocyanin and bovine serum albumin For methods, see: Avrameas, et al. Iramunochemistry, 1969; 6: 43. With 4mg of hemocyanin Peptide complex plus complete Freund's adjuvant was used to immunize rabbits. After 15 days, hemocyanin peptide complex plus incomplete Freund's adjuvant was used to boost immunity once.
  • Suitable oligonucleotide fragments selected from the polynucleotides of the present invention are used as hybridization probes in a variety of ways.
  • the probes can be used to hybridize to genomic or cDNA libraries of normal tissue or pathological tissue from different sources to It is identified whether it contains the polynucleotide sequence of the present invention and a homologous polynucleotide sequence is detected.
  • the probe can also be used to detect the polynucleotide sequence of the present invention or its homologous polynucleotide sequence in normal tissues or Whether the expression in pathological tissue cells is abnormal.
  • the purpose of this embodiment is to select a suitable oligonucleotide fragment from the polynucleotide SEQ ID NO: 1 of the present invention as a hybridization probe, and to identify whether some tissues contain the polynucleoside of the present invention by a filter hybridization method.
  • Filter hybridization methods include dot blotting, Southern imprinting, Nor thern blotting, and copying methods. They all use the same steps to fix the polynucleotide sample to be tested on the filter and then hybridize.
  • the sample-immobilized filter is first pre-hybridized with a probe-free hybridization buffer to saturate the non-specific binding site of the sample on the filter with the carrier and the synthesized polymer.
  • the pre-hybridization solution is then replaced with a hybridization buffer containing labeled probes and incubated to hybridize the probes to the target nucleic acid.
  • unhybridized probes are removed by a series of membrane washes.
  • This embodiment uses higher-intensity washing conditions (such as lower salt concentration and higher temperature) to reduce the hybridization background and retain only strong specific signals.
  • the probes used in this embodiment include two types: the first type of probes are oligonucleotide fragments that are completely the same as or complementary to the polynucleotide SEQ ID NO: 1 of the present invention; the second type of probes are partially related to the present invention
  • the polynucleotide SEQ ID NO: 1 is the same or complementary oligonucleotide fragment.
  • the dot blot method is used to fix the sample on the filter membrane. Under the high-intensity washing conditions, the first type of probe and the sample have the strongest hybridization specificity and are retained.
  • oligonucleotide fragments for use as hybridization probes from the polynucleotide SEQ ID NO: 1 of the present invention should follow the following principles and several aspects to be considered:
  • the preferred range of probe size is 18-50 nucleotides
  • Those that meet the above conditions can be used as primary selection probes, and then further computer sequence analysis, including the primary selection probe and its source sequence region (ie, SEQ ID NO: 1) and other known genomic sequences and their complements The regions are compared for homology. If the homology with the non-target molecular region is greater than 85% or there are more than 15 consecutive bases, the primary probe should not be used;
  • Probe 1 (probel), which belongs to the first type of probe, is completely homologous or complementary to the gene fragment of SEQ ID NO: 1 (41Nt)
  • Probe 2 which belongs to the second type of probe, is equivalent to the replacement mutation sequence (41Nt) of the gene fragment of SEQ ID NO: 1 or its complementary fragment:
  • PBS phosphate buffered saline
  • step 8-13 are only used when contamination must be removed, otherwise step 14 can be performed directly.
  • NC membranes nitrocellulose membranes
  • Two NC membranes are required for each probe, so that it can be used in the following experimental steps.
  • the film was washed with high-strength conditions and strength conditions, respectively.
  • probes 1 3 ⁇ IProbe (0.1 OD / 10 ⁇ 1), add 2 ⁇ IKinase buffer, 8-10 uCi ⁇ - 32 P- dATP + 2U Kinase, to make up to a final volume of 20 ⁇ 1.
  • the 32 P-Probe (the second peak is free ⁇ - 32P -dATP) is prepared.
  • pre-hybridization solution 10xDenhardt's; 6xSSC, 0.1 mg / ml CT DNA (calf thymus DNA).
  • Gene microarrays or DNA microarrays are new technologies currently being developed by many national laboratories and large pharmaceutical companies. It refers to the orderly and high-density arrangement of large numbers of target gene fragments on glass, The data is compared and analyzed on a carrier such as silicon using fluorescence detection and computer software to achieve the purpose of rapid, efficient, and high-throughput analysis of biological information.
  • the polynucleotide of the present invention can be used as target DNA for gene chip technology for high-throughput research of new gene functions; search for and screen new tissue-specific genes, especially new genes related to diseases such as tumors; diagnosis of diseases such as hereditary diseases .
  • the specific method steps have been reported in the literature. For example, see DeRisi, JL, Lyer, V. & Brown, P.0. (1997) Science 278, 680-686. And Helle, RA, Schema, M. , Chai, A., Shalom, D., (1997) PNAS 94: 2150-2155.
  • a total of 4,000 polynucleotide sequences of various full-length cDNAs are used as target DNA, including the polynucleotide of the present invention. They were respectively amplified by PCR. After purification, the concentration of the amplified product was adjusted to about 500 ng / ul, and spotted on a glass medium using a Cartesian 7500 spotter (purchased from Cartesian, USA). The distance is 280 ⁇ . The spotted slides were hydrated, dried, and cross-linked in a purple diplomatic coupling instrument. After elution, the DNA was fixed on a glass slide to prepare a chip.
  • the specific method steps have been reported in the literature in various ways, and the specific method steps have been reported in the literature in various ways.
  • the spotting post-processing steps of this embodiment are:
  • Total mRNA was extracted from normal liver and liver cancer by one-stroke method, and Oligotex mRNA Midi Kit (purchased from QiaGen) was used to purify mRNA, and the fluorescent reagent Cy3dUTP (5-Amino- propargy 1 ⁇ 2 ⁇ -deoxyur i dine 5 '-tr iphate coupled to Cy3 fluorescent dye was purchased from Amersham Phamacia Biotech Company by reverse transcription. ) Mark normal tissue mRNA. Mark liver cancer tissue mRNA with Cy5dUTP (5-Amino-propargyl-2 '-deoxyur i dine 5 * -tr iphate coupled to Cy5 fluorescent dye, purchased from Amersham Phamacia Biotech).
  • Probes were prepared after purification. Specific steps refer to and methods Schena, M., Shalon, D., Heller, R. (1996) Proc. Natl. Acad. Sci. USA. Vol. 93: 10614- 10619. Schena, M., Shalon, Dar i. Davis, RW (1995) Science.270. (20): 467-480. (3) Hybridization
  • Probes from the above two tissues and chips were hybridized in a UniHyb TM Hybridization Solution (purchased from TeleChem) hybridization solution for 16 hours, washed with a washing solution (1 x SSC, 0.2% SDS) at room temperature, and then scanned with ScanArray 3000.
  • Scanner purchased from General Scanning Company, USA
  • the scanned image is processed by Imagene software (Biodiscovery Company, USA) for data analysis, and the Cy3 / Cy5 ratio of each point is calculated.
  • the points whose ratio is less than 0.5 and greater than 2 are considered Genes with differential expression.
  • polypeptides of the present invention as well as antagonists, agonists and inhibitors of the polypeptides, can be directly used in the treatment of diseases, for example, they can treat malignant tumors, adrenal deficiency, skin diseases, various types of inflammation, HIV infection, and immune diseases.
  • this signal peptide sequence can treat or prevent diseases caused by a lack of normal functioning lipoproteins due to abnormal signal peptide synthesis, such as Alzheimer's disease, brain tumors, exogenous / endogenous lipidemia, family Hypercholesterolemia, Cholesterol lipid storage disease, fatty liver, liver cancer and coronary heart disease.
  • the polypeptides or fragments thereof of the present invention can also be used to treat or prevent various cancers, including but not limited to: Respiratory system tumors: nasal and sinus tumors, nasopharyngeal cancer, laryngeal cancer, tracheal tumors, lung cancer, pleural mesothelioma digestive system
  • Tumors salivary gland tumor, esophageal cancer, esophageal leiomyosarcoma, primary esophageal small cell cancer, gastric cancer, gastric malignant lymphoma, gastric carcinoid, colorectal cancer, colon cancer, intestinal malignant lymphoma, primary liver cancer, liver mother Cell tumor, primary gallbladder cancer, pancreatic cancer
  • lymphatic tumors acute leukemia, chronic myelogenous leukemia, chronic lymphocytic leukemia, malignant lymphoma (such as lymphatic reticulum, malignant lymphoma, Hodgkin's lymphoma, non-Hodgkin's lymphoma, etc.), malignant Histiocytosis Neurological tumors: astrocytoma, ependymal tumor, medulloblastoma, meningiomas, glioblastoma, acoustic neuroma, angiogenic tumor, pituitary adenoma, craniopharyngioma
  • osteoid osteoma osteochondroma, chondroma, osteoblastoma, chondroblastoma, etc.
  • malignant bone tumors such as giant cell tumor of bone, osteosarcoma, chondrosarcoma, Ewing's sarcoma, myeloma
  • Tumors of the genitourinary system benign tumors such as renal tubular adenoma, eosinophilic adenoma, juxtaglomerular cell tumor, polycystic kidney tumor, seminoma, teratoma, testicular stromal cell tumor, intrauterine Membrane stromal tumor, hydatidiform mole, ovarian tumor, breast fibroma, malignant tumors such as renal cell carcinoma, renal sarcomatoid carcinoma, papillary renal cell carcinoma, nephroblastoma, prostate cancer, testicular tumor chorionic carcinoma, cervical cancer , Endometrial cancer, endometrial cancer, infusion tube cancer, ovarian cancer, breast cancer
  • benign tumors such as renal tubular adenoma, eosinophilic adenoma, juxtaglomerular cell tumor, polycystic kidney tumor, seminoma, teratoma, testicular stromal cell tumor, intrauterine Membr
  • Endocrine system tumors pituitary adenoma, benign thyroid tumor, thyroid cancer, parathyroid adenoma, parathyroid cancer, adrenal myeloma, pheochromocytoma, islet cell tumor, multiple endocrine gland tumor, thymic tumor
  • Soft tissue tumors fibroma, fibrosarcoma, fibromatosis, lipoma, liposarcoma, leiomyoma, leiomyosarcoma, rhabdomyosarcoma, rhabdomyosarcoma, synovial tissue tumor, hemangioma, intramuscular hemangioma, blood vessels Globuloma, hemangioendothelial sarcoma, lymphangioma, lymphangiomyoma, lymphatic endothelial sarcoma, histiocytoma, malignant fibrous histiocytoma, soft tissue acinar sarcoma, clear cell sarcoma, myxoma, extraosteal Ewing sarcoma, Soft tissue osteosarcoma, soft tissue chondrosarcoma, mesothelioma, epithelioid sarcoma, schwannomas, neurofibromas, malignant schw
  • Skin malignancies dermal Mike cell tumor, Kaposi sarcoma, melanoma
  • the invention also provides methods for screening compounds to identify agents that increase (agonist) or suppress (antagonist) the human lipoprotein precursor protein signal peptide 14.
  • Agonists enhance human lipoprotein precursor protein signal peptide 14 to stimulate biological functions such as cell proliferation, while antagonists prevent and treat disorders related to excessive cell proliferation, such as various cancers.
  • mammalian cells or membrane preparations expressing human lipoprotein precursor protein signal peptide 14 can be cultured with labeled human lipoprotein precursor protein signal peptide 14 in the presence of a drug. The ability of the drug to increase or block this interaction is then determined.
  • Antagonists of human lipoprotein precursor protein signal peptide 14 include antibodies, compounds, receptor deletions, and the like that have been screened.
  • the antagonist of human lipoprotein precursor protein signal peptide 14 can bind to human lipoprotein precursor protein signal peptide 14 and eliminate its function, or inhibit the production of the polypeptide, or bind to the active site of the polypeptide to make the polypeptide Cannot perform biological functions.
  • human lipoprotein precursor protein signal peptide 14 can be added to the bioanalytical assay by determining the effect of the compound on the interaction between human lipoprotein precursor protein signal peptide 14 and its receptor. Determine if the compound is an antagonist. Receptor deletions and analogs that act as antagonists can be screened in the same manner as described above for screening compounds.
  • Polypeptide molecules capable of binding to human lipoprotein precursor protein signal peptide 1 4 can be obtained by screening a random peptide library composed of various possible combinations of amino acids bound to a solid phase. When screening, the human lipoprotein precursor protein signal peptide 14 molecule should generally be labeled.
  • the present invention provides polypeptides, and fragments, derivatives, analogs or cells thereof as antigens. To produce antibodies. These antibodies can be polyclonal or monoclonal antibodies. The invention also provides antibodies against the human lipoprotein precursor protein signal peptide 14 epitope. These antibodies include (but are not limited to): polyclonal antibodies, monoclonal antibodies, chimeric antibodies, single chain antibodies, Fab fragments, and fragments produced by Fab expression libraries.
  • Polyclonal antibodies can be produced by injecting human lipoprotein precursor protein signal peptide 14 directly into immunized animals (such as rabbits, mice, rats, etc.).
  • immunized animals such as rabbits, mice, rats, etc.
  • a variety of adjuvants can be used to enhance the immune response, including but not limited to 'S adjuvant and so on.
  • Techniques for preparing monoclonal antibodies to human lipoprotein precursor protein signal peptide 14 include, but are not limited to, hybridoma technology (Kohler and Milste in. Nature, 1975, 256: 495-497), triple tumor technology, human beta -Cell hybridoma technology, EBV-hybridoma technology, etc.
  • Chimeric antibodies that bind human constant regions and non-human variable regions can be produced using existing techniques (Morri et al, PNAS, 1985, 81: 6851). 0 Existing techniques for producing single-chain antibodies (US Pa t No. 4946778) can also be used to produce single chain antibodies against human lipoprotein precursor protein signal peptide 14.
  • Antibodies against human lipoprotein precursor protein signal peptide 14 can be used in immunohistochemical techniques to detect human lipoprotein precursor protein signal peptide 14 in biopsy specimens.
  • Monoclonal antibodies that bind to human lipoprotein precursor protein signal peptide 14 can also be labeled with radioisotopes and injected into the body to track their location and distribution. This radiolabeled antibody can be used as a non-invasive diagnostic method to locate tumor cells and determine whether there is metastasis.
  • Antibodies can also be used to design immunotoxins that target a particular part of the body.
  • High-affinity monoclonal antibodies can covalently bind to bacterial or plant toxins (such as diphtheria toxin, ricin, ormosine, etc.).
  • a common method is to attack the amino group of an antibody with a thiol cross-linking agent such as SPDP and bind the toxin to the antibody through the exchange of disulfide bonds.
  • This hybrid antibody can be used to kill the human lipoprotein precursor protein signal peptide 14 Positive cells.
  • the antibodies of the present invention can be used to treat or prevent diseases related to the human lipoprotein precursor protein signal peptide 14. Administration of an appropriate dose of antibody can stimulate or block the production or activity of human lipoprotein precursor protein signal peptide 14.
  • the invention also relates to a diagnostic test method for quantitative and localized detection of human lipoprotein precursor protein signal peptide 14 levels.
  • These tests are well known in the art and include human lipoprotein precursor protein signal peptide 14 levels detected in FI SH assays and radioimmunoassay assays, and can be used to explain human lipoprotein precursor protein signal peptide 14 levels in various Importance in disease and in the diagnosis of diseases where human lipoprotein precursor protein signal peptide 14 plays a role.
  • polypeptide of the present invention can also be used for peptide mapping analysis.
  • the polypeptide can be specifically cleaved by physical, chemical or enzymatic analysis, and subjected to one-dimensional or two-dimensional or three-dimensional gel electrophoresis analysis, and more preferably mass spectrometry analysis. Analysis.
  • the polynucleotide encoding human lipoprotein precursor protein signal peptide 14 can also be used for a variety of therapeutic purposes. Gene therapy technology can be used to treat abnormal cell proliferation, development, or metabolism caused by the non-expression or abnormal / inactive expression of human lipoprotein precursor protein signal peptide 14.
  • Recombinant gene therapy vectors (such as viral vectors) can be designed to express mutated human lipoprotein precursor protein signal peptide 14 to inhibit endogenous human lipoprotein precursor protein signal peptide 14 activity.
  • a variant human lipoprotein precursor protein signal peptide 14 may be a shortened human lipoprotein precursor protein signal peptide 14 that lacks a signaling functional domain. Although it can bind to downstream substrates, it lacks signal transduction. active.
  • the recombinant gene therapy vector can be used for treating diseases caused by abnormal expression or activity of human lipoprotein precursor protein signal peptide 14.
  • Virus-derived expression vectors such as retrovirus, adenovirus, adenovirus-associated virus, herpes simplex virus, parvovirus, etc. can be used to transfer a polynucleotide encoding a human lipoprotein precursor protein signal peptide 14 into a cell.
  • a method for constructing a recombinant viral vector carrying a polynucleotide encoding a human lipoprotein precursor protein signal peptide 14 can be found in the existing literature (Sambrook, et al.).
  • a recombinant polynucleotide encoding the human lipoprotein precursor protein signal peptide 14 can be packaged into liposomes and transferred into cells.
  • Methods for introducing a polynucleotide into a tissue or cell include: directly injecting the polynucleotide into a tissue in vivo; or introducing the polynucleotide into a cell in vitro through a vector (such as a virus, phage, or plasmid), and then transplanting the cell Into the body and so on.
  • a vector such as a virus, phage, or plasmid
  • Oligonucleotides including antisense RNA and DNA
  • ribozymes that inhibit human lipoprotein precursor protein signal peptide 14 mRNA are also within the scope of the present invention.
  • a ribozyme is an enzyme-like RNA molecule that specifically decomposes specific RNA. Its mechanism of action is that the ribozyme molecule specifically hybridizes with a complementary target RNA and performs endonucleation.
  • Antisense RNA and DNA and ribozymes are available Any RNA or DM synthesis technology, such as solid-phase phosphate amide chemical synthesis, has been widely used. Antisense RNA molecules can be obtained by in vitro or in vivo transcription of a DNA sequence encoding the RNA.
  • This DM sequence has been integrated downstream of the RNA polymerase promoter of the vector.
  • it can be modified in a variety of ways, such as increasing the sequence length on both sides, and the linkage between ribonucleosides using phosphate thioester or peptide bonds instead of phosphodiester bonds.
  • the polynucleotide encoding human lipoprotein precursor protein signal peptide 14 can be used for the diagnosis of diseases related to human lipoprotein precursor protein signal peptide 14.
  • the polynucleotide encoding human lipoprotein precursor protein signal peptide 14 can be used to detect the expression of human lipoprotein precursor protein signal peptide 14 or the abnormal expression of human lipoprotein precursor protein signal peptide 14 in a disease state.
  • the DNA sequence encoding human lipoprotein precursor protein signal peptide 14 can be used to hybridize biopsy specimens to determine the expression status of human lipoprotein precursor protein signal peptide 14.
  • Hybridization techniques include Sou thern blotting, Nor thern blotting, and in situ hybridization.
  • Some or all of the polynucleotides of the present invention can be used as probes to be fixed on a microarray or a DNA chip (also referred to as a "gene chip") for analyzing differential expression analysis and gene diagnosis of genes in tissues.
  • Human lipoprotein precursor protein signal peptide 14 specific primers for RNA-polymerase chain reaction (RT-PCR) in vitro amplification can also detect human lipoprotein precursor protein signal peptide 14 transcription products.
  • Human lipoprotein precursor protein signal peptide 14 gene can also be used to diagnose human lipoprotein precursor protein signal peptide 14-related diseases.
  • Human lipoprotein precursor protein signal peptide 14 mutations include point mutations, translocations, deletions, recombinations, and any other abnormalities compared to the normal wild-type human lipoprotein precursor protein signal peptide 14 DM sequence. Mutations can be detected using existing techniques such as Southern blotting, DNA sequence analysis, PCR and in situ hybridization. In addition, mutations may affect protein expression. Therefore, Northern blotting and Western blotting can be used to indirectly determine whether a gene is mutated.
  • the sequences of the invention are also valuable for chromosome identification.
  • the sequence specifically targets a specific position on a human chromosome and can hybridize to it.
  • specific sites for each gene on the chromosome need to be identified.
  • only a few chromosome markers based on actual sequence data are available for marking chromosome positions.
  • an important first step is to locate these DNA sequences on a chromosome.
  • a PCR primer (preferably 15-35b P ) is prepared from the cDNA, and the sequence can be mapped on the chromosome. These primers were then used for PCR screening of somatic hybrid cells containing individual human chromosomes. Only those hybrid cells that contain the human gene corresponding to the primer will produce amplified fragments.
  • PCR localization of somatic hybrid cells is a quick way to localize DM to specific chromosomes.
  • oligonucleotide primers of the present invention in a similar manner, a set of fragments from a specific chromosome or a large number of genomic clones can be used to achieve sublocalization.
  • Other similar strategies that can be used for chromosomal localization include in situ hybridization, chromosome pre-screening with labeled flow sorting, and pre-selection of hybridization to construct chromosome-specific cDNA libraries.
  • Fluorescent in situ hybridization of cDNA clones with metaphase chromosomes allows precise chromosomal localization in one step.
  • FISH Fluorescent in situ hybridization
  • the physical location of the sequence on the chromosome can be correlated with the genetic map data. These data can be found in, for example, V. Mckusick, Mendel ian Inheritance in Man (available online with Johns Hopkins University Welch Medical Library). Linkage analysis can then be used to determine the relationship between genes and diseases that have been mapped to chromosomal regions. Next, the differences in cDNA or genomic sequences between the affected and unaffected individuals need to be determined. If a mutation is observed in some or all diseased individuals and the mutation is not observed in any normal individuals, the mutation may be the cause of the disease.
  • Comparing diseased and oncoming individuals usually involves first looking for structural changes in the chromosome, such as deletions or translocations that are visible at the chromosomal level or detectable with cDNA sequence-based PCR.
  • the cDNA accurately mapped to the chromosomal region associated with the disease can be one of 50 to 500 potentially pathogenic genes (assuming 1 megabase Figure resolution and each 20kb corresponds to a gene).
  • the polypeptides, polynucleotides and mimetics, agonists, antagonists and inhibitors of the present invention can be used in combination with a suitable pharmaceutical carrier.
  • suitable pharmaceutical carrier can be water, glucose, ethanol, salts, buffers, glycerol, and combinations thereof.
  • the composition comprises a safe and effective amount of the polypeptide or antagonist, and carriers and excipients which do not affect the effect of the drug. These compositions can be used as drugs for the treatment of diseases.
  • the invention also provides a kit or kit containing one or more containers containing one or more ingredients of the pharmaceutical composition of the invention.
  • a kit or kit containing one or more containers containing one or more ingredients of the pharmaceutical composition of the invention.
  • these containers there may be instructional instructions given by government agencies that manufacture, use, or sell pharmaceuticals or biological products, which prompts permission for administration on the human body by government agencies that produce, use, or sell.
  • the polypeptides of the invention can be used in combination with other therapeutic compounds.
  • the pharmaceutical composition can be administered in a convenient manner, such as by a topical, intravenous, intraperitoneal, intramuscular, subcutaneous, intranasal or intradermal route of administration.
  • Human lipoprotein precursor protein signal peptide 14 is administered in an amount effective to treat and / or prevent a specific indication.
  • the amount and range of human lipoprotein precursor protein signal peptide 1 4 to be administered to a patient will depend on many factors, such as the mode of administration, the health conditions of the person to be treated, and the judgment of the diagnosing physician.

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Abstract

The present invention discloses a novel polypeptide - human prolipoprotein signal peptide 14 and a polynucleotide encoding the same, as well as a method of producing the polypeptide by DNA recombinant technology. The present invention also discloses methods of using the polypeptide in treatment of various diseases, such as malignant tumor, blood disease, HIV infection, immunological disease and various inflammations. The present invention also discloses an antagonist against the polypeptide and the therapeutic use of the same. The present invention also discloses the use of such polynucleotide encoding human prolipoprotein signal peptide 14.

Description

一种新的多肽一一人脂蛋白前体蛋白信号肽 14和编码 if种多'肽的多核苷酸 技术领域  A new polypeptide-human lipoprotein precursor protein signal peptide 14 and a polynucleotide encoding an if species poly'peptide TECHNICAL FIELD
本发明属于生物技术领域, 具体地说, 本发明描述了一种新的多肽一一人脂蛋 白前体蛋白信号肽 14, 以及编码此多肽的多核苷酸序列。 本发明还涉及此多核苷 酸和多肽的制备方法和应用。 背景技术  The present invention belongs to the field of biotechnology. Specifically, the present invention describes a new polypeptide, a human lipoprotein precursor protein signal peptide 14, and a polynucleotide sequence encoding the polypeptide. The invention also relates to a preparation method and application of the polynucleotide and polypeptide. Background technique
脂蛋白是一类由蛋白和各种脂肪酸和类固醇构成的结合蛋白。 蛋白和类固醇 靠弱的非共价键结合在一起的, 而另一些脂蛋白则是由蛋白与脂类靠共价键结合,. 脂蛋白可以根据其蛋白质组成分为三类, 核蛋白类 (如凝血酶至活酶)、 磷蛋白类 (如卵黄中的脂磷蛋白) 和单纯蛋白类 (如血浆脂蛋白和脑蛋白脂)。 脂蛋白在机 体的作用十分重要。 例如, 在血液中的脂类有一部分就是由血浆脂蛋白传送的  Lipoproteins are a class of binding proteins composed of proteins and various fatty acids and steroids. Proteins and steroids are bound together by weak non-covalent bonds, while other lipoproteins are bound by proteins and lipids by covalent bonds. Lipoproteins can be divided into three categories based on their protein composition, nuclear proteins ( (Such as thrombin to live enzymes), phosphoproteins (such as lipophosphoproteins in yolk), and simple proteins (such as plasma lipoproteins and brain proteolipids). The role of lipoproteins in the body is very important. For example, part of the lipids in the blood is transmitted by plasma lipoproteins
在细胞中, 对膜蛋白进行脂类的共价修饰是一个普遍的现象。 事实上, 细胞 膜的蛋白都是脂蛋白。 它们与细胞膜的磷脂层相互作用形成膜结构。  Covalent modification of lipids to membrane proteins is a common phenomenon in cells. In fact, the proteins at the cell membrane are all lipoproteins. They interact with the phospholipid layer of the cell membrane to form a membrane structure.
膜脂蛋白的合成与修饰的过程在原核生物中研究的较清楚。 在原核生物中, 膜脂蛋白首先作为一个蛋白前体被合成出来。 这个前体蛋白的 N 端包含一个信号 肽。 在蛋白分泌出质膜的过程中, 相继会发生 N 端的半胱氨酸的修饰和信号肽的 切除这两个过程。 这个过程是在一个保守的区域中发生的。 而将来不经过脂修饰 的蛋白的信号肽则不具有这个保守序列。 看来, 这个保守序列是成熟蛋白进行脂 修饰与否的分选信号。 [Prote in Eng 1989 May; 2 (7): 531- 4]之后末端的半胱氨酸 残基 N-乙酰化, 蛋白转移至外膜, 并共价连接到肽聚糖层。 信号肽在被信号肽酶 I I 所剪切的同时也被水解。 [J Bioenerg Bi omembr 1990 Jun; 22 (3) : 45 1-71 ] 上 述膜脂蛋白的合成与修饰的过程在许多的原核生物和原核生物中都有发现, 具有 较普遍的意义。  Membrane lipoprotein synthesis and modification are more clearly studied in prokaryotes. In prokaryotes, membrane lipoproteins are first synthesized as a protein precursor. The N-terminus of this precursor protein contains a signal peptide. In the process of protein secretion from the plasma membrane, two processes of modification of the N-terminal cysteine and removal of the signal peptide occur successively. This process takes place in a conservative area. In the future, the signal peptide of a protein that has not undergone lipid modification will not have this conserved sequence. It appears that this conserved sequence is a sorting signal for whether the mature protein is lipid-modified or not. [Prote in Eng 1989 May; 2 (7): 531-4] After the N-acetylation of the cysteine residue at the terminal end, the protein is transferred to the outer membrane and covalently linked to the peptidoglycan layer. The signal peptide is cleaved by the signal peptidase I I and is also hydrolyzed. [J Bioenerg Bi omembr 1990 Jun; 22 (3): 45 1-71] The above-mentioned process of synthesis and modification of membrane lipoproteins has been found in many prokaryotes and prokaryotes, and has a more general significance.
在信号肽剪切过程中, 信号肽酶 Π 识别信号肽上一段保守的序列, 并剪切半 胱氨酸残基的与甘油脂-脂肪酸脂相连的上游片断。 这一段保守序列是:  During signal peptide cleavage, signal peptidase II recognizes a conserved sequence on the signal peptide and cleaves the upstream segment of the cysteine residue connected to the glycerolipid-fatty acid lipid. This conserved sequence is:
{DERK} (6) - [LIVMFWSTAG] (2) - [LIVMFYSTAGCQ] - [AGS] -C 其中, C 是脂的连接位点, 并必须位于 15 到 35 个残基之间。 在序列的前七个氨基酸中必须有一个赖氨酸或 者精氨酸。 {DERK} (6)-[LIVMFWSTAG] (2)-[LIVMFYSTAGCQ]-[AGS] -C where C is the attachment site for the lipid and must be between 15 and 35 residues. There must be one lysine or arginine in the first seven amino acids of the sequence.
在脑.中, 阿朴脂蛋白与阿尔兹海默氏症相关。 高密度脂蛋白可以将脑中存在 的多余的胆固醇除去, 保持淀粉海量维持在正常水平。 这类脂蛋白的表达失常会 导致阿尔兹海默氏症, 胆固醇在脑内沉积, 导致脑瘤等。 In the brain, apolipoprotein is associated with Alzheimer's disease. High-density lipoprotein can remove excess cholesterol present in the brain and keep the starch mass at a normal level. Abnormal expression of this type of lipoprotein Causes Alzheimer's disease, cholesterol deposits in the brain, and brain tumors.
许多类型的血浆脂蛋白是由肝脏形成的, 因此如果脂蛋白前体蛋白的信号肽 的合成受阻, 会导致生成的蛋白不能正确的脂化, 而导致脂蛋白的合成代谢紊乱, 对血浆脂蛋白来说, 其传送脂类的功能就会受到影响, 从而导致一系列的肝脏疾 病, 如外源 /内源性脂血症、 家族性高胆固醇血症、 胆固醇脂储藏病、 脂肪肝等。 严重的脂肪肝还会导致肝癌。 脂蛋白的合成代谢紊乱还会导致冠心病等疾病。  Many types of plasma lipoproteins are formed by the liver, so if the synthesis of the signal peptide of the precursor protein of lipoprotein is blocked, the resulting protein will not be properly lipidated, resulting in disorder of lipoprotein anabolic metabolism. For example, its lipid transport function will be affected, leading to a series of liver diseases, such as exogenous / endogenous lipidemia, familial hypercholesterolemia, cholesterol storage disease, fatty liver, etc. Severe fatty liver can also cause liver cancer. Lipoprotein anabolic disorders can also cause diseases such as coronary heart disease.
本发明的多肽包含一个膜脂蛋白前体信号肽的脂结合位点, 并且表达谱的分 析表明在肝癌细胞中的次多肽的含量比正常肝组织中的低, 说明与肝癌有关, 与 膜脂蛋白前体信号肽的功能一致。 综上所述, 本发明是一种新的人脂蛋白的前体 蛋白信号肽, 具有相似的生物学功能。 并命名为人脂蛋白前体蛋白信号肽 14。  The polypeptide of the present invention contains a lipid-binding site of a membrane lipoprotein precursor signal peptide, and analysis of the expression profile indicates that the content of sub-peptide in liver cancer cells is lower than that in normal liver tissue, indicating that it is related to liver cancer and membrane lipids. The function of the protein precursor signal peptide is consistent. In summary, the present invention is a novel human lipoprotein precursor protein signal peptide, which has similar biological functions. And named as human lipoprotein precursor protein signal peptide 14.
由于如上所述人脂蛋白前体蛋白信号肽 14 蛋白在机体重要功能中起重要作 用, 而且相信这些调节过程中涉及大量的蛋白, 因而本领域中一直需要鉴定更多 参与这些过程的人脂蛋白前体蛋白信号肽 14 蛋白, 特别是鉴定这种蛋白的氨基酸 序列。 新人脂蛋白前体蛋白信号肽 14 蛋白编码基因的分离也为研究确定该蛋白在 健康和疾病状态下的作用提供了基础。 这种蛋白可能构成开发疾病诊断和 /或治疗 药的基础, 因此分离其编码 DNA是非常重要的。 本发明的一个目的是提供分离的新的多肽一一人脂蛋白前体蛋白信号肽 14 以 及其片段、 类似物和衍生物。  Because the human lipoprotein precursor protein signal peptide 14 protein plays an important role in important body functions as described above, and it is believed that a large number of proteins are involved in these regulatory processes, there has been a need in the art to identify more human lipoproteins involved in these processes. Precursor protein signal peptide 14 protein, especially the amino acid sequence of this protein is identified. Isolation of the new human lipoprotein precursor protein signal peptide 14 protein encoding gene also provides a basis for research to determine the role of this protein in health and disease states. This protein may form the basis for developing diagnostic and / or therapeutic drugs, so isolating its coding DNA is important. It is an object of the present invention to provide isolated novel polypeptides-human lipoprotein precursor protein signal peptide 14 and fragments, analogs and derivatives thereof.
本发明的另一个目的是提供编码该多肽的多核苷酸。  Another object of the invention is to provide a polynucleotide encoding the polypeptide.
本发明的另一个目的是提供含有编码人脂蛋白前体蛋白信号肽 14 的多核苷酸 的重组载体。  Another object of the present invention is to provide a recombinant vector containing a polynucleotide encoding a human lipoprotein precursor protein signal peptide 14.
本发明的另一个目的是提供含有编码人脂蛋白前体蛋白信号肽 14 的多核苷酸 的基因工程化宿主细胞。  It is another object of the present invention to provide a genetically engineered host cell comprising a polynucleotide encoding a human lipoprotein precursor protein signal peptide 14.
本发明的另一个目的是提供生产人脂蛋白前体蛋白信号肽 14的方法。  Another object of the present invention is to provide a method for producing a human lipoprotein precursor protein signal peptide 14.
本发明的另一个目的是提供针对本发明的多肽一一人脂蛋白前体蛋白信号肽 14 的抗体。  Another object of the present invention is to provide an antibody against the polypeptide-human lipoprotein precursor protein signal peptide 14 of the present invention.
本发明的另一个目的是提供了针对本发明多肽一一人脂蛋白前体蛋白信号肽 14 的模拟化合物、 拮抗剂、 激动剂、 抑制剂。  Another object of the present invention is to provide mimic compounds, antagonists, agonists, and inhibitors directed to the polypeptide of the present invention-human lipoprotein precursor protein signal peptide 14.
本发明的另一个目的是提供诊断治疗与人脂蛋白前体蛋白信号肽 14 异常相关 的疾病的方法。  Another object of the present invention is to provide a method for diagnosing and treating diseases associated with abnormalities of the human lipoprotein precursor protein signal peptide 14.
本发明涉及一种分离的多肽, 该多肽是人源的, 它包含: 具有 SEQ I D No. 2 氨基酸序列的多肽、 或其保守性变体、 生物活性片段或衍生物。 较佳地, 该多肽 是具有 SEQ I D NO: 2氨基酸序列的多肽。 The present invention relates to an isolated polypeptide. The polypeptide is of human origin and comprises: SEQ ID No. 2 Amino acid sequence of a polypeptide, or a conservative variant, biologically active fragment or derivative thereof. Preferably, the polypeptide is a polypeptide having the amino acid sequence of SEQ ID NO: 2.
本发明还涉及一种分离的多核苷酸, 它包含选自下组的一种核苷酸序列或其 变体:  The invention also relates to an isolated polynucleotide comprising a nucleotide sequence or a variant thereof selected from the group consisting of:
(a)编码具有 SEQ ID No. 2氨基酸序列的多肽的多核苷酸;  (a) a polynucleotide encoding a polypeptide having the amino acid sequence of SEQ ID No. 2;
(b)与多核苷酸(a)互补的多核苷酸;  (b) a polynucleotide complementary to polynucleotide (a);
(c)与(a)或(b)的多核苷酸序列具有至少 70¾相同性的多核苷酸。  (c) A polynucleotide having at least 70¾ identity to the polynucleotide sequence of (a) or (b).
更佳地, 该多核苷酸的序列是选自下组的一种: (a)具有 SEQ ID NO: 1 中 619- 1038位的序列; 和(b)具有 SEQ ID NO: 1中 1-2572位的序列。  More preferably, the sequence of the polynucleotide is one selected from the group consisting of: (a) a sequence having positions 619-1038 in SEQ ID NO: 1; and (b) having a sequence of 1-2572 in SEQ ID NO: 1 Sequence of bits.
本发明另外涉及一种含有本发明多核苷酸的载体, 特别是表达载体; 一种用 该载体遗传工程化的宿主细胞, 包括转化、 转导或转染的宿主细胞; 一种包括培 养所述宿主细胞和回收表达产物的制备本发明多肽的方法。  The invention further relates to a vector, in particular an expression vector, containing the polynucleotide of the invention; a host cell genetically engineered with the vector, including a transformed, transduced or transfected host cell; and a method comprising culturing said Host cell and method of preparing the polypeptide of the present invention by recovering the expression product.
本发明还涉及一种能与本发明多肽特异性结合的抗体。  The invention also relates to an antibody capable of specifically binding to a polypeptide of the invention.
本发明还涉及一种筛选的模拟、 激活、 拮抗或抑制人脂蛋白前体蛋白信号肽 14蛋白活性的化合物的方法, 其包括利用本发明的多肽。 本发明还涉及用该方法 获得的化合物。  The invention also relates to a method for screening compounds that mimic, activate, antagonize or inhibit the activity of human lipoprotein precursor protein signal peptide 14 protein, which comprises utilizing the polypeptide of the invention. The invention also relates to compounds obtained by this method.
本发明还涉及一种体外检测与人脂蛋白前体蛋白信号肽 14 蛋白异常表达相 关的疾病或疾病易感性的方法, 包括检测生物样品中所述多肽或其编码多核苷酸 序列中的突变, 或者检测生物样品中本发明多肽的量或生物活性。  The invention also relates to a method for in vitro detection of a disease or susceptibility to disease associated with abnormal expression of a human lipoprotein precursor protein signal peptide 14 protein, comprising detecting mutations in the polypeptide or a polynucleotide sequence encoding the same in a biological sample, Alternatively, the amount or biological activity of a polypeptide of the invention in a biological sample is detected.
本发明也涉及一种药物组合物, 它含有本发明多肽或其模拟物、 激活剂、 拮 抗剂或抑制剂以及药学上可接受的载体。  The invention also relates to a pharmaceutical composition comprising a polypeptide of the invention or a mimetic thereof, an activator, an antagonist or an inhibitor, and a pharmaceutically acceptable carrier.
本发明还涉及本发明的多肽和 /或多核苷酸在制备用于治疗癌症、 发育性疾病 或免疫性疾病或其它由于人脂蛋白前体蛋白信号肽 14表达异常所引起疾病的药物 的用途。  The present invention also relates to the use of the polypeptide and / or polynucleotide of the present invention in the preparation of a medicament for treating cancer, developmental disease or immune disease or other diseases caused by abnormal expression of human lipoprotein precursor protein signal peptide 14.
本发明的其它方面由于本文的技术的公开, 对本领域的技术人员而言是显而 易见的。 本说明书和权利要求书中使用的下列术语除非特别说明具有如下的含义: "核酸序列" 是指寡核苷酸、 核苷酸或多核苷酸及其片段或部分, 也可以指基因 组或合成的 DNA或 RNA, 它们可以是单链或双链的, 代表有义链或反义链。 类似地, 术语 "氨基酸序列" 是指寡肽、 肽、 多肽或蛋白质序列及其片段或部分。 当本发 明中的 "氨基酸序列" 涉及一种天然存在的蛋白质分子的氨基酸序列时, 这种 "多 肽" 或 "蛋白质" 不意味着将氨基酸序列限制为与所述蛋白质分子相关的完整的 天然氨基酸。 Other aspects of the invention will be apparent to those skilled in the art from the disclosure of the techniques herein. The following terms used in this specification and claims have the following meanings unless specifically stated: "Nucleic acid sequence" refers to an oligonucleotide, a nucleotide or a polynucleotide and a fragment or part thereof, and may also refer to a genomic or synthetic DNA or RNA, they can be single-stranded or double-stranded, representing the sense or antisense strand. Similarly, the term "amino acid sequence" refers to an oligopeptide, peptide, polypeptide or protein sequence and fragments or portions thereof. When the "amino acid sequence" in the present invention relates to the amino acid sequence of a naturally occurring protein molecule, this "multiple "Peptide" or "protein" is not meant to limit the amino acid sequence to the complete natural amino acid associated with the protein molecule.
蛋白质或多核苷酸 "变体" 是指一种具有一个或多个氨基酸或核苷酸改变的 氨基酸序列或编码它的多核苷酸序列。 所述改变可包括氨基酸序列或核苷酸序列 中氨基酸或核苷酸的缺失、 插入或替换。 变体可具有 "保守性" 改变, 其中替换 的氨基酸具有与原氨基酸相类似的结构或化学性质, 如用亮氨酸替换异亮氨酸。 变体也可具有非保守性改变, 如用色氨酸替换甘氨酸。  A protein or polynucleotide "variant" refers to an amino acid sequence having one or more amino acids or nucleotide changes or a polynucleotide sequence encoding it. The changes may include deletions, insertions or substitutions of amino acids or nucleotides in the amino acid sequence or nucleotide sequence. Variants can have "conservative" changes in which the substituted amino acid has a structural or chemical property similar to the original amino acid, such as the replacement of isoleucine with leucine. Variants can also have non-conservative changes, such as replacing glycine with tryptophan.
"缺失" 是指在氨基酸序列或核苷酸序列中一个或多个氨基酸或核苷酸的缺 失。  "Deletion" refers to the deletion of one or more amino acids or nucleotides in an amino acid sequence or nucleotide sequence.
"插入" 或 "添加" 是指在氨基酸序列或核苷酸序列中的改变导致与天然存在 的分子相比, 一个或多个氨基酸或核苷酸的增加。 "替换" 是指由不同的氨基酸或 核苷酸替换一个或多个氨基酸或核苷酸。  "Insertion" or "addition" refers to an alteration in the amino acid sequence or nucleotide sequence that results in an increase in one or more amino acids or nucleotides compared to a naturally occurring molecule. "Replacement" refers to the replacement of one or more amino acids or nucleotides with different amino acids or nucleotides.
"生物活性" 是指具有天然分子的结构、 调控或生物化学功能的蛋白质.. 类似 地, 术语 "免疫学活性" 是指天然的、 重组的或合成蛋白质及其片段在合适的动 物或细胞中诱导特定免疫反应以及与特异性抗体结合的能力。  "Biological activity" refers to proteins with the structural, regulatory, or biochemical functions of natural molecules. Similarly, the term "immunologically active" refers to natural, recombinant, or synthetic proteins and fragments thereof in suitable animals or cells The ability to induce specific immune responses and to bind specific antibodies.
"激动剂" 是指当与人脂蛋白前体蛋白信号肽 14结合时, 一种可引起该蛋白质 改变从而调节该蛋白质活性的分子。 激动剂可以包括蛋白质、 核酸、 碳水化合物 或任何其它可结合人脂蛋白前体蛋白信号肽 14的分子。  An "agonist" refers to a molecule that, when combined with a human lipoprotein precursor protein signal peptide 14, can cause the protein to change, thereby regulating the activity of the protein. An agonist may include a protein, a nucleic acid, a carbohydrate, or any other molecule that can bind the human lipoprotein precursor protein signal peptide 14.
"拮抗剂" 或 "抑制物" 是指当与人脂蛋白前体蛋白信号肽 14结合时, 一种可 封闭或调节人脂蛋白前体蛋白信号肽 14的生物学活性或免疫学活性的分子 拮抗 剂和抑制物可以包括蛋白质、 核酸、 碳水化合物或任何其它可结合人脂蛋白前体 蛋白信号肽 14的分子。  An "antagonist" or "inhibitor" refers to a molecule that can block or regulate the biological or immunological activity of human lipoprotein precursor protein signal peptide 14 when combined with human lipoprotein precursor protein signal peptide 14. Antagonists and inhibitors may include proteins, nucleic acids, carbohydrates, or any other molecule that can bind to human lipoprotein precursor protein signal peptide 14.
"调节" 是指人脂蛋白前体蛋白信号肽 14的功能发生改变, 包括蛋白质活性的 升高或降低、 结合特性的改变及人脂蛋白前体蛋白信号肽 14的任何其它生物学性 质、 功能或免疫性质的改变。  "Regulation" refers to a change in the function of human lipoprotein precursor protein signal peptide 14, including an increase or decrease in protein activity, a change in binding characteristics, and any other biological properties and functions of human lipoprotein precursor protein signal peptide 14. Or changes in immune properties.
"基本上纯' '是指基本上不含天然与其相关的其它蛋白、脂类、糖类或其它物质 本领域的技术人员能用标准的蛋白质纯化技术纯化人脂蛋白前体蛋白信号肽 14 ,_, 基本上纯的人脂蛋白前体蛋白信号肽 14 在非还原性聚丙烯酰胺凝胶上能产生单一 的主带 人脂蛋白前体蛋白信号肽 14多肽的纯度可用氨基酸序列分析。  "Substantially pure '" means substantially free of other proteins, lipids, carbohydrates or other substances naturally associated with it. Those skilled in the art can purify the human lipoprotein precursor protein signal peptide 14 using standard protein purification techniques, _, Basically pure human lipoprotein precursor protein signal peptide 14 can produce a single main band of human lipoprotein precursor protein signal peptide 14 on a non-reducing polyacrylamide gel. The purity of the polypeptide can be analyzed by amino acid sequence.
"互补的" 或 "互补" 是指在允许的盐浓度和温度条件下通过碱基配对的多核 苷酸天然结合。 例如, 序列 "C-T- G- A" 可与互补的序列 "G- A- C-T" 结合。 两个 单链分子之间的互补可以是部分的或全部的。 核酸链之间的互补程度对于核酸链 之间杂交的效率及强度有明显影响。 "Complementary" or "complementary" refers to polynucleotides that naturally bind through base-pairing under conditions of acceptable salt concentration and temperature. For example, the sequence "CT-G-A" can be combined with the complementary sequence "G-A-CT". The complementarity between two single-stranded molecules may be partial or complete. The degree of complementarity between nucleic acid strands The efficiency and intensity of hybridization have a significant effect.
"同源性" 是指互补的程度, 可以是部分同源或完全同源。 "部分同源" 是指 一种部分互补的序列, 其至少可部分抑制完全互补的序列与靶核酸的杂交。 这种 杂交的抑制可通过在严格性程度降低的条件下进行杂交 ( Southern印迹或 Nor thern 印迹等) 来检测。 基本上同源的序列或杂交探针可竟争和抑制完全同源的序列与 靶序列在的严格性程度降低的条件下的结合。 这并不意味严格性程度降低的条件 允许非特异性结合, 因为严格性程度降低的条件要求两条序列相互的结合为特异 性或选择性相互作用。  "Homology" refers to the degree of complementarity and can be partially homologous or completely homologous. "Partial homology" refers to a partially complementary sequence that at least partially inhibits hybridization of a fully complementary sequence to a target nucleic acid. This inhibition of hybridization can be detected by performing hybridization (Southern blotting or Nor thern blotting, etc.) under conditions of reduced stringency. Substantially homologous sequences or hybridization probes can compete and inhibit the binding of completely homologous sequences to the target sequence under conditions of reduced stringency. This does not mean that the conditions of reduced stringency allow non-specific binding, because the conditions of reduced stringency require that the two sequences bind to each other specifically or selectively.
"相同性百分率" 是指在两种或多种氨基酸或核酸序列比较中序列相同或相似 的百分率。 可用电子方法测定相同性百分率, 如通过 MEGALIGN程序 ( Lasergene sof tware package, DNASTAR, Inc. , Madi son Wi s. )。 MEGALIGN程序可根据不同的 方法如 C lus ter法比较两种或多种序列(H igg ins, D. G. 和 P. M. Sharp (1988) Gene 73: 237-244)。 C l us ter法通过检查所有配对之间的距离将各组序列排列成簇。 然后将各簇以成对或成组分配。 两个氨基酸序列如序列 A和序列 B之间的相同性百 分率通过下式计算: 序列 A与序列 B之间匹配的残基个数  "Percent identity" refers to the percentage of sequences that are the same or similar in the comparison of two or more amino acid or nucleic acid sequences. The percent identity can be determined electronically, such as through the MEGALIGN program (Lasergene sof tware package, DNASTAR, Inc., Madi son Wis.). The MEGALIGN program can compare two or more sequences according to different methods such as the Cluster method (Higgins, D. G. and P. M. Sharp (1988) Gene 73: 237-244). The C l uster method arranges each group of sequences into clusters by checking the distance between all pairs. The clusters are then assigned in pairs or groups. The percent identity between two amino acid sequences such as sequence A and sequence B is calculated by the following formula: The number of matching residues between sequence A and sequence B
X 1 00  X 1 00
序列 A的残基数一序列 A中间隔残基数一序列 B中间隔残基数  Number of residues in sequence A-number of interval residues in sequence A-number of interval residues in sequence B
也可以通过 C lus ter法或用本领域周知的方法如 Jotun He in 测定核酸序列之间 的相同性百分率(He in J. , (1990) Methods in emzumo logy 183: 625-645)。  The percent identity between nucleic acid sequences can also be determined by the Cluster method or by methods known in the art such as Jotun He in (He in J., (1990) Methods in emzumo logy 183: 625-645).
"相似性" 是指氨基酸序列之间排列对比时相应位置氨基酸残基的相同或保 守性取代的程度。 用于保守性取代的氨基酸例如, 带负电荷的氨基酸可包括天冬 氨酸和谷氨酸; 带正电荷的氨基酸可包括赖氨酸和精氨酸; 具有不带电荷的头部 基团有相似亲水性的氨基酸可包括亮氨酸、 异亮氨酸和缬氨酸; 甘氨酸和丙氨酸; 天冬酰胺和谷氨酰胺; 丝氨酸和苏氨酸; 苯丙氨酸和酪氨酸。  "Similarity" refers to the degree of identical or conservative substitutions of amino acid residues at corresponding positions in the alignment of amino acid sequences. Amino acids used for conservative substitutions, for example, negatively charged amino acids may include aspartic acid and glutamic acid; positively charged amino acids may include lysine and arginine; having an uncharged head group is Similar hydrophilic amino acids may include leucine, isoleucine and valine; glycine and alanine; asparagine and glutamine; serine and threonine; phenylalanine and tyrosine.
"反义" 是指与特定的 DNA或 RNA序列互补的核苷酸序列。 "反义链" 是指与 "有 义链" 互补的核酸链。  "Antisense" refers to a nucleotide sequence that is complementary to a particular DNA or RNA sequence. "Antisense strand" refers to a nucleic acid strand that is complementary to the "sense strand".
"衍生物" 是指 HFP或编码其的核酸的化学修饰物。 这种化学修饰物可以是用 烷基、 酰基或氨基替换氢原子。 核酸衍生物可编码保留天然分子的主要生物学特 性的多肽。  "Derivative" refers to a chemical modification of HFP or a nucleic acid encoding it. Such a chemical modification may be the replacement of a hydrogen atom with an alkyl group, an acyl group or an amino group. Nucleic acid derivatives can encode polypeptides that retain the main biological characteristics of natural molecules.
"抗体" 是指完整的抗体分子及其片段, 如 Fa、 ?(^') 2及? , 其能特异性结 合人脂蛋白前体蛋白信号肽 14的抗原决定簇。 "Antibody" refers to a complete antibody molecule and its fragments, such as Fa,? (^ ') 2 and? Which can specifically bind The epitope of human lipoprotein precursor protein signal peptide 14.
"人源化抗体" 是指非抗原结合区域的氨基酸序列被替换变得与人抗体更为相 似, 但仍保留原始结合活性的抗体。  A "humanized antibody" refers to an antibody in which the amino acid sequence of a non-antigen binding region is replaced to become more similar to a human antibody, but still retains the original binding activity.
"分离的" 一词指将物质从它原来的环境 (例如, 若是自然产生的就指其天然 环境) 之中移出。 比如说, 一个自然产生的多核苷酸或多肽存在于活动物中就是 没有被分离出来, 但同样的多核苷酸或多肽同一些或全部在自然系统中与之共存 的物质分开就是分离的。 这样的多核苷酸可能是某一载体的一部分, 也可能这样 的多核苷酸或多肽是某一组合物的一部分。 既然载体或组合物不是它天然环境的 成分, 它们仍然是分离的。 如本发明所用, "分离的" 是指物质从其原始环境中分离出来 (如果是天然的 物质, 原始环境即是天然环境)。 如活体细胞内的天然状态下的多聚核苷酸和多肽 是没有分离纯化的, 但同样的多聚核苷酸或多肽如从天然状态中同存在的其他物 质中分开, 则为分离纯化的。  The term "isolated" refers to the removal of a substance from its original environment (for example, its natural environment if it occurs naturally). For example, a naturally occurring polynucleotide or polypeptide is not isolated when it is present in a living animal, but the same polynucleotide or polypeptide is separated from some or all of the substances that coexist with it in the natural system. Such a polynucleotide may be part of a vector, or such a polynucleotide or polypeptide may be part of a composition. Since the carrier or composition is not part of its natural environment, they are still isolated. As used herein, "isolated" refers to the separation of a substance from its original environment (if it is a natural substance, the original environment is the natural environment). For example, polynucleotides and polypeptides in a natural state in a living cell are not isolated and purified, but the same polynucleotides or polypeptides are separated and purified if they are separated from other substances existing in the natural state. .
如本文所用, "分离的人脂蛋白前体蛋白信号肽 14 " 是指人脂蛋白前体蛋 白信号肽 14基本上不含天然与其相关的其它蛋白、 脂类、 糖类或其它物质。 本 领域的技术人员能用标准的蛋白质纯化技术纯化人脂蛋白前体蛋白信号肽 14。 基本上纯的多肽在非还原聚丙烯酰胺凝胶上能产生单一的主带。 人脂蛋白前体 蛋白信号肽 14多肽的纯度能用氨基酸序列分析。  As used herein, "isolated human lipoprotein precursor protein signal peptide 14" means that human lipoprotein precursor protein signal peptide 14 is substantially free of other proteins, lipids, carbohydrates, or other substances with which it is naturally associated. Those skilled in the art can purify the human lipoprotein precursor protein signal peptide 14 using standard protein purification techniques. Substantially pure polypeptides can produce a single main band on a non-reducing polyacrylamide gel. The purity of human lipoprotein precursor protein signal peptide 14 polypeptide can be analyzed by amino acid sequence.
本发明提供了一种新的多肽一一人脂蛋白前体蛋白信号肽 14 , 其基本上是由 SEQ ID NO: 2所示的氨基酸序列组成的。 本发明的多肽可以是重组多肽、 天然多肽、 合成多肽, 优选重组多肽。 本发明的多肽可以是天然纯化的产物, 或是化学合成 的产物, 或使用重组技术从原核或真核宿主 (例如, 细菌、 酵母、 高等植物、 昆虫 和哺乳动物细胞)中产生。 根据重组生产方案所用的宿主, 本发明的多肽可以是糖 基化的, 或可以是非糖基化的。 本发明的多肽还可包括或不包括起始的甲硫氨酸 残基。  The present invention provides a new polypeptide, a human lipoprotein precursor protein signal peptide 14, which is basically composed of the amino acid sequence shown in SEQ ID NO: 2. The polypeptide of the present invention may be a recombinant polypeptide, a natural polypeptide, or a synthetic polypeptide, and preferably a recombinant polypeptide. The polypeptides of the present invention can be naturally purified products or chemically synthesized products, or can be produced from prokaryotic or eukaryotic hosts (eg, bacteria, yeast, higher plants, insects, and mammalian cells) using recombinant techniques. Depending on the host used in the recombinant production protocol, the polypeptide of the invention may be glycosylated, or it may be non-glycosylated. The polypeptides of the invention may also include or exclude the initial methionine residue.
本发明还包括人脂蛋白前体蛋白信号肽 14 的片段、 衍生物和类似物,, 如本发 明所用, 术语 "片段"、 "衍生物" 和 "类似物" 是指基本上保持本发明的人脂蛋 白前体蛋白信号肽 14 相同的生物学功能或活性的多肽。 本发明多肽的片段、 衍生 物或类似物可以是: ( I ) 这样一种, 其中一个或多个氨基酸残基被保守或非保守 氨基酸残基 (优选的是保守氨基酸残基) 取代, 并且取代的氨基酸可以是也可以 不是由遗传密码子编码的; 或者 ( Π ) 这样一种, 其中一个或多个氨基酸残基上 的某个基团被其它基团取代包含取代基; 或者 ( Π Ι ) 这样一种, 其中; ¾熟多肽与 另一种化合物 (比如延长多肽半衰期的化合物, 例如聚乙二醇) 融合; 或者 ( IV ) 这样一种, 其中附加的氨基酸序列融合进成熟多肽而形成的多肽序列 (如前导序 列或分泌序列或用来纯化此多肽的序列或蛋白原序列) 通过本文的阐述, 这样的 片段、 衍生物和类似物被认为在本领域技术人员的知识范围之内。 The present invention also includes fragments, derivatives, and analogs of the human lipoprotein precursor protein signal peptide 14. As used in the present invention, the terms "fragment", "derivative", and "analog" mean substantially maintaining the present invention Human lipoprotein precursor protein signal peptide 14 A polypeptide with the same biological function or activity. A fragment, derivative or analog of the polypeptide of the present invention may be: (I) a kind in which one or more amino acid residues are substituted with conservative or non-conservative amino acid residues (preferably conservative amino acid residues), and the substitution The amino acid may or may not be encoded by the genetic codon; or (Π) a type in which one or more amino acid residues A certain group is substituted by another group to include a substituent; or (III) is one in which the fused polypeptide is fused to another compound (such as a compound that extends the half-life of the polypeptide, such as polyethylene glycol); or (IV) A polypeptide sequence (such as a leader sequence or a secreted sequence or a sequence used to purify this polypeptide or a protease sequence) formed by fusing additional amino acid sequences into a mature polypeptide. As explained herein, such fragments, Derivatives and analogs are considered to be within the knowledge of those skilled in the art.
本发明提供了分离的核酸 (多核苷酸), 基本由编码具有 SEQ ID NO: 2 氨基酸 序列的多肽的多核苷酸组成。 本发明的多核苷酸序列包括 SEQ ID NO: 1 的核苷酸 序列。 本发明的多核苷酸是从人胎脑组织的 cDNA 文库中发现的。 它包含的多核苷 酸序列全长为 2572 个碱基, 其开放读框 ( 6191038 ) 编码了 139 个氨基酸。 此多 肽具有膜脂蛋白脂结合位点的特征序列, 可推断出该人脂蛋白前体蛋白信号肽 14 具有膜脂蛋白脂结合位点所代表的结构和功能。  The present invention provides an isolated nucleic acid (polynucleotide), which basically consists of a polynucleotide encoding a polypeptide having the amino acid sequence of SEQ ID NO: 2. The polynucleotide sequence of the present invention includes the nucleotide sequence of SEQ ID NO: 1. The polynucleotide of the present invention is found from a cDNA library of human fetal brain tissue. It contains a polynucleotide sequence with a total length of 2572 bases, and its open reading frame (6191038) encodes 139 amino acids. This polypeptide has a characteristic sequence of a membrane lipoprotein lipid binding site, and it can be deduced that the human lipoprotein precursor protein signal peptide 14 has a structure and function represented by a membrane lipoprotein lipid binding site.
本发明的多核苷酸可以是 DNA形式或是 RNA形式。 DNA形式包括 cDNA、 基因组 DNA 或人工合成的 DNA。 DNA 可以是单链的或是双链的。 DNA 可以是编码链或非编 码链。 编码成熟多肽的编码区序列可以与 SEQ ID N0: 1 所示的编码区序列相同或 者是简并的变异体。 如本发明所用, "简并的变异体"在本发明中是指编码具有 SEQ ID NO: 2的蛋白质或多肽, 但与 SEQ ID NO: 1所示的编码区序列有差别的核酸序列。  The polynucleotide of the present invention may be in the form of DNA or RNA. DNA forms include cDNA, genomic DNA, or synthetic DNA. DNA can be single-stranded or double-stranded. DNA can be coding or non-coding. The coding region sequence encoding the mature polypeptide may be the same as the coding region sequence shown in SEQ ID NO: 1 or it may be a degenerate variant. As used in the present invention, a "degenerate variant" refers to a nucleic acid sequence encoding a protein or polypeptide having SEQ ID NO: 2 but different from the coding region sequence shown in SEQ ID NO: 1 in the present invention.
编码 SEQ ID NO: 2 的成熟多肽的多核苷酸包括: 只有成熟多肽的编码序列; 成熟多肽的编码序列和各种附加编码序列; 成熟多肽的编码序列 (和任选的附加 编码序列) 以及非编码序列。  The polynucleotide encoding the mature polypeptide of SEQ ID NO: 2 includes: only the coding sequence of the mature polypeptide; the coding sequence of the mature polypeptide and various additional coding sequences; the coding sequence of the mature polypeptide (and optional additional coding sequences); Coding sequence.
术语 "编码多肽的多核苷酸" 是指包括编码此多肽的多核苷酸和包括附加编 码和 /或非编码序列的多核苷酸。  The term "polynucleotide encoding a polypeptide" refers to a polynucleotide that includes the polypeptide and a polynucleotide that includes additional coding and / or non-coding sequences.
本发明还涉及上述描述多核苷酸的变异体, 其编码与本发明有相同的氨基酸 序列的多肽或多肽的片断、 类似物和衍生物。 此多核苷酸的变异体可以是天然发 生的等位变异体或非天然发生的变异体。 这些核苷酸变异体包括取代变异体、 缺 失变异体和插入变异体。 如本领域所知的, 等位变异体是一个多核苷酸的替换形 式, 它可能是一个或多个核苷酸的取代、 缺失或插入, 但不会从实质上改变其编 码的多肽的功能。  The invention also relates to variants of the polynucleotides described above, which encode polypeptides or fragments, analogs and derivatives of polypeptides having the same amino acid sequence as the invention. This polynucleotide variant can be a naturally occurring allelic variant or a non-naturally occurring variant. These nucleotide variants include substitution variants, deletion variants, and insertion variants. As known in the art, an allelic variant is an alternative form of a polynucleotide that may be a substitution, deletion, or insertion of one or more nucleotides, but does not substantially change the function of the polypeptide it encodes .
本发明还涉及与以上所描述的序列杂交的多核苷酸 (两个序列之间具有至少 50%, 优选具有 70%的相同性)。 本发明特别涉及在严格条件下与本发明所述多核苷 酸可杂交的多核苷酸。 在本发明中, "严格条件" 是指: (1)在较低离子强度和较 高温度下的杂交和洗脱, 如 0. 2xSSC, 0. 1%SDS, 6 (TC ;或(2)杂交时加用变性剂, 如 50% (v/v)甲酰胺, 0. 1%小牛血清 / 0. l%F i co l l, 42 °C等; 或(3)仅在两条序列之间 的相同性至少在 95%以上,更好是 97%以上时才发生杂交。 并且, 可杂交的多核苷 酸编码的多肽与 SEQ ID NO: 2所示的成熟多肽有相同的生物学功能和活性。 The invention also relates to a polynucleotide that hybridizes to the sequence described above (having at least 50%, preferably 70% identity between the two sequences). The invention particularly relates to polynucleotides that can hybridize to the polynucleotides of the invention under stringent conditions. In the present invention, "strict conditions" means: (1) hybridization and elution at lower ionic strength and higher temperature, such as 0.2xSSC, 0.1% SDS, 6 (TC; or (2) Add denaturants during hybridization, such as 50% (v / v) formamide, 0.1% calf serum / 0.1% F i co ll, 42 ° C, etc .; or (3) only between the two sequences Between Hybridization occurs only when the identity is at least 95%, and more preferably 97%. In addition, the polypeptide encoded by the hybridizable polynucleotide has the same biological function and activity as the mature polypeptide shown in SEQ ID NO: 2.
本发明还涉及与以上所描述的序列杂交的核酸片段。 如本发明所用, "核酸片 段"的长度至少含 10个核苷酸, 较好是至少 20-30个核苷酸, 更好是至少 50- 60个 核苷酸,最好是至少 100个核苷酸以上。核酸片段也可用于核酸的扩增技术(如 PCR) 以确定和 /或分离编码人脂蛋白前体蛋白信号肽 14的多核苷酸。  The invention also relates to nucleic acid fragments that hybridize to the sequences described above. As used herein, a "nucleic acid fragment" contains at least 10 nucleotides in length, preferably at least 20-30 nucleotides, more preferably at least 50-60 nucleotides, and most preferably at least 100 nuclei. Glycylic acid or more. Nucleic acid fragments can also be used in nucleic acid amplification techniques, such as PCR, to identify and / or isolate polynucleotides encoding human lipoprotein precursor protein signal peptide 14.
本发明中的多肽和多核苷酸优选以分离的形式提供, 更佳地被纯化至均质。 本发明的编码人脂蛋白前体蛋白信号肽 14的特异的多核苷酸序列能用多种 方法获得。 例如, 用本领域熟知的杂交技术分离多核苷酸。 这些技术包括但不 局限于: 1)用探针与基因组或 cDNA文库杂交以检出同源的多核苷酸序列, 和 2) 表达文库的抗体筛选以检出具有共同结构特征的克隆的多核苷酸片段。  The polypeptides and polynucleotides in the present invention are preferably provided in an isolated form and are more preferably purified to homogeneity. The specific polynucleotide sequence encoding the human lipoprotein precursor protein signal peptide 14 of the present invention can be obtained by various methods. For example, polynucleotides are isolated using hybridization techniques well known in the art. These techniques include, but are not limited to: 1) hybridization of probes to genomic or cDNA libraries to detect homologous polynucleotide sequences, and 2) antibody screening of expression libraries to detect cloned polynucleosides with common structural characteristics Acid fragments.
本发明的 DM片段序列也能用下列方法获得: 1)从基因组 DNA分离双链 DNA 序列; 2)化学合成 DM序列以获得所述多肽的双链 DNA。  The DM fragment sequence of the present invention can also be obtained by the following methods: 1) isolating the double-stranded DNA sequence from the genomic DNA; 2) chemically synthesizing the DM sequence to obtain the double-stranded DNA of the polypeptide.
上述提到的方法中, 分离基因组 DNA 最不常用。 DNA 序列的直接化学合成 是经常选用的方法。 更经常选用的方法是 cDNA序列的分离。 分离感兴趣的 cDNA 的标准方法是从高表达该基因的供体细胞分离 mRNA并进行逆转录, 形成质粒或 噬菌体 cDNA 文库。 提取 mRNA 的方法已有多种成熟的技术, 试剂盒也可从商业 途径获得(Q i agene)。 而构建 cDNA 文库也是通常的方法(Sambrook, e t a l . , Mo l ecu l ar C l on ing, A Labora tory Manua l , Co l d Spr ing Harbor Labora t ory. New York , 1989)。还可得到商业供应的 cDNA文库, 如 C l oiit ech公司的不同 cDNA 文库。 当结合使用聚合酶反应技术时, 即使极少的表达产物也能克隆。  Of the methods mentioned above, genomic DNA isolation is the least commonly used. Direct chemical synthesis of DNA sequences is often the method of choice. The more commonly used method is the isolation of cDNA sequences. The standard method for isolating the cDNA of interest is to isolate mRNA from donor cells that overexpress the gene and perform reverse transcription to form a plasmid or phage cDNA library. Various methods have been developed for mRNA extraction, and kits are also commercially available (Q i agene). And the construction of cDNA libraries is also a common method (Sambrook, et al., Moleculiar Cling, A Labora tory Manual, Coldspring Harbor Laboraty. New York, 1989). Commercially available cDNA libraries are also available, such as different cDNA libraries from Cloieitech. When polymerase reaction technology is used in combination, even very small expression products can be cloned.
可用常规方法从这些 cDNA 文库中筛选本发明的基因。 这些方法包括(但不 限于): (l) DNA- DM 或 DM- RNA 杂交; (2)标志基因功能的出现或丧失; (3)测 定人脂蛋白前体蛋白信号肽 14 的转录本的水平; (4)通过免疫学技术或测定生 物学活性, 来检测基因表达的蛋白产物。 上述方法可单用, 也可多种方法联合 应用。  The genes of the present invention can be selected from these cDNA libraries by conventional methods. These methods include (but are not limited to): (l) DNA-DM or DM-RNA hybridization; (2) the appearance or loss of marker gene function; (3) determination of the level of transcript of human lipoprotein precursor protein signal peptide 14 (4) Detecting protein products expressed by genes through immunological techniques or measuring biological activity. The above methods can be used alone or in combination.
在第(1)种方法中, 杂交所用的探针是与本发明的多核苷酸的任何一部分同 源, 其长度至少 10个核苷酸, 较好是至少 30个核苷酸, 更好是至少 5 0个核苷 酸, 最好是至少 1 00个核苷酸。 此外, 探针的长度通常在 2000个核苷酸之内, 较佳的为 1 000个核苷酸之内。 此处所用的探针通常是在本发明的基因序列信息 的基础上化学合成的 DM序列。 本发明的基因本身或者片段当然可以用作探针。 DNA探针的标记可用放射性同位素, 荧光素或酶(如碱性磷酸酶)等。 在第(4)种方法中, 检测人脂蛋白前体蛋白信号肽 14 基因表达的蛋白产物 可用免疫学技术如 Western 印迹法, 放射免疫沉淀法, 酶联免疫吸附法(ELISA) 等。 In the method (1), the probe used for hybridization is homologous to any part of the polynucleotide of the present invention, and its length is at least 10 nucleotides, preferably at least 30 nucleotides, more preferably At least 50 nucleotides, preferably at least 100 nucleotides. In addition, the length of the probe is usually within 2,000 nucleotides, preferably within 1 000 nucleotides. The probe used here is generally a DM sequence chemically synthesized based on the gene sequence information of the present invention. The genes or fragments of the present invention can of course be used as probes. DNA probes can be labeled with radioisotopes, luciferin, or enzymes (such as alkaline phosphatase). In the (4) method, immunological techniques such as Western blotting, radioimmunoprecipitation, and enzyme-linked immunosorbent assay (ELISA) can be used to detect the protein product of the human lipoprotein precursor protein signal peptide 14 gene expression.
应 用 PCR 技 术 扩 增 DNA/RNA 的 方 法 (Saiki, et al. Science 1985; 230: 1350-1354)被优选用于获得本发明的基因。 特别是很难从文库中得到 全长的 cDNA 时, 可优选使用 RACE法(RACE - cDNA末端快速扩增法), 用于 PCR 的引物可根据本文所公开的本发明的多核苷酸序列信息适当地选择, 并可用常 规方法合成。 可用常规方法如通过凝胶电泳分离和纯化扩增的 DNA/RNA片段。  A method of applying a PCR technique to amplify DNA / RNA (Saiki, et al. Science 1985; 230: 1350-1354) is preferably used to obtain the gene of the present invention. In particular, when it is difficult to obtain a full-length cDNA from a library, the RACE method (RACE-Rapid Amplification of cDNA Ends) can be preferably used. The primers used for PCR can be appropriately based on the polynucleotide sequence information of the present invention disclosed herein. Select and synthesize using conventional methods. The amplified DNA / RNA fragments can be isolated and purified by conventional methods such as by gel electrophoresis.
如上所述得到的本发明的基因, 或者各种 DNA 片段等的多核苷酸序列可用 常规方法如双脱氧链终止法(Sanger et al. PNAS, 1977, 74: 5463- 5467)测定。 这类多核苷酸序列测定也可用商业测序试剂盒等。为了获得全长的 cDNA序列, 测 序需反复进行。 有时需要测定多个克隆的 cDNA 序列, 才能拼接成全长的 cDNA 序列。  The polynucleotide sequence of the gene of the present invention or various DNA fragments and the like obtained as described above can be determined by a conventional method such as dideoxy chain termination method (Sanger et al. PNAS, 1977, 74: 5463-5467). Such polynucleotide sequences can also be determined using commercial sequencing kits and the like. In order to obtain the full-length cDNA sequence, the sequencing must be repeated. Sometimes it is necessary to determine the cDNA sequence of multiple clones in order to splice into a full-length cDNA sequence.
本发明也涉及包含本发明的多核苷酸的载体, 以及用本发明的载体或直接 用人脂蛋白前体蛋白信号肽 14编码序列经基因工程产生的宿主细胞, 以及经重 组技术产生本发明所述多肽的方法。  The present invention also relates to a vector comprising the polynucleotide of the present invention, and a host cell that is genetically engineered using the vector of the present invention or directly using the human lipoprotein precursor protein signal peptide 14 coding sequence, and that recombinant technology is used to produce the present invention. Polypeptide method.
本发明中, 编码人脂蛋白前体蛋白信号肽 14的多核苷酸序列可插入到载体 中, 以构成含有本发明所述多核苷酸的重组载体。 术语 "载体" 指本领域熟知 的细菌质粒、 噬菌体、 酵母质粒、 植物细胞病毒、 哺乳动物细胞病毒如腺病毒、 逆转录病毒或其它载体。 在本发明中适用的载体包括但不限于: 在细菌中表达 的基于 T7启动子的表达载体(Rosenberg, et al. Gene, 1987, 56: 125); 在哺 乳动物细胞中表达的 pMSXND 表达载体(Lee and Nathans, J Bio Chera. 263: 3521, 1988)和在昆虫细胞中表达的来源于杆状病毒的载体。 总之, 只要能 在宿主体内复制和稳定, 任何质粒和载体都可以用于构建重组表达载体。 表达 载体的一个重要特征是通常含有复制起始点、 启动子、 标记基因和翻译调控元 件。  In the present invention, a polynucleotide sequence encoding the human lipoprotein precursor protein signal peptide 14 can be inserted into a vector to constitute a recombinant vector containing the polynucleotide of the present invention. The term "vector" refers to bacterial plasmids, phages, yeast plasmids, plant cell viruses, mammalian cell viruses such as adenoviruses, retroviruses, or other vectors well known in the art. Vectors suitable for use in the present invention include, but are not limited to: T7 promoter-based expression vectors expressed in bacteria (Rosenberg, et al. Gene, 1987, 56: 125); pMSXND expression vectors expressed in mammalian cells ( Lee and Nathans, J Bio Chera. 263: 3521, 1988) and baculovirus-derived vectors expressed in insect cells. In short, as long as it can be replicated and stabilized in the host, any plasmid and vector can be used to construct a recombinant expression vector. An important feature of expression vectors is that they usually contain an origin of replication, a promoter, a marker gene, and translational regulatory elements.
本领域的技术人员熟知的方法能用于构建含编码人脂蛋白前体蛋白信号肽 14 的 DNA 序列和合适的转录 /翻译调控元件的表达载体。 这些方法包括体外重 组 DNA 技术、 DNA 合成技术、 体内重组技术等(Sambroook, et al. Molecular Cloning, a Laboratory Manual, cold Spring Harbor Laboratory. New York, 1989) c 所述的 MA序列可有效连接到表达载体中的适当启动子上, 以指导 mRNA 合成。 这些启动子的代表性例子有: 大肠杆菌的 lac 或 trp 启动子; λ噬菌体 i o Methods known to those skilled in the art can be used to construct expression vectors containing a DNA sequence encoding human lipoprotein precursor protein signal peptide 14 and appropriate transcriptional / translational regulatory elements. These methods include in vitro recombinant DNA technology, DNA synthesis technology, in vivo recombination technology, etc. (Sambroook, et al. Molecular Cloning, a Laboratory Manual, cold Spring Harbor Laboratory. New York, 1989) c The MA sequence can be efficiently linked to expression An appropriate promoter in the vector to direct mRNA synthesis. Representative examples of these promoters are: the lac or trp promoter of E. coli; lambda phage io
的 PL启动子; 真核启动子包括 CMV立即早期启动子、 HSV胸苷激酶启动子、 早 期和晚期 SV4 0 启动子、 反转录病毒的 LTRs 和其它一些已知的可控制基因在原 核细胞或真核细胞或其病毒中表达的启动子。 表达载体还包括翻译起始用的核 糖体结合位点和转录终止子等。 在载体中插入增强子序列将会使其在高等真核 细胞中的转录得到增强。 增强子是 DNA表达的顺式作用因子, 通常大约有 10到 300 个碱基对, 作用于启动子以增强基因的转录。 可举的例子包括在复制起始 点晚期一侧的 100到 270个碱基对的 SV40增强子、 在复制起始点晚期一侧的多 瘤增强子以及腺病毒增强子等。 PL promoter; eukaryotic promoters include CMV immediate early promoter, HSV thymidine kinase promoter, early and late SV40 promoters, retroviral LTRs and other known controllable genes in prokaryotic cells or Promoters expressed in eukaryotic cells or their viruses. The expression vector also includes a ribosome binding site for translation initiation and a transcription terminator. Insertion of enhancer sequences into the vector will enhance its transcription in higher eukaryotic cells. Enhancers are cis-acting factors for DNA expression, usually about 10 to 300 base pairs, which act on promoters to enhance gene transcription. Illustrative examples include SV40 enhancers of 100 to 270 base pairs on the late side of the origin of replication, tumorigenic enhancers on the late side of the origin of replication, and adenoviral enhancers.
此外, 表达载体优选地包含一个或多个选择性标记基因, 以提供用于选择 转化的宿主细胞的表型性状, 如真核细胞培养用的二氢叶酸还原酶、 新霉素抗 性以及绿色荧光蛋白(GFP), 或用于大肠杆菌的四环素或氨苄青霉素抗性等。  In addition, the expression vector preferably contains one or more selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as dihydrofolate reductase, neomycin resistance, and green for eukaryotic cell culture. Fluorescent protein (GFP), or tetracycline or ampicillin resistance for E. coli.
本领域一般技术人员都清楚如何选择适当的载体 /转录调控元件 (如启动 子、 增强子等) 和选择性标记基因。  Those of ordinary skill in the art will know how to select appropriate vector / transcription control elements (such as promoters, enhancers, etc.) and selectable marker genes.
本发明中, 编码人脂蛋白前体蛋白信号肽 14的多核苷酸或含有该多核苷酸 的重组载体可转化或转导入宿主细胞, 以构成含有该多核苷酸或重组载体的基 因工程化宿主细胞。 术语 "宿主细胞" 指原核细胞, 如细菌细胞; 或是低等真 核细胞, 如酵母细胞; 或是高等真核细胞, 如哺乳动物细胞。 代表性例子有: 大肠杆菌, 链霉菌属; 细菌细胞如鼠伤寒沙门氏菌; 真菌细胞如酵母; 植物细 胞; 昆虫细胞如果蝇 S2或 Sf 9 ; 动物细胞如 CH0、 COS或 Bowes黑素瘤细胞等,, 用本发明所述的 DNA序列或含有所述 DNA序列的重组载体转化宿主细胞可 用本领域技术人员熟知的常规技术进行。 当宿主为原核生物如大肠杆菌时, 能 吸收 DNA 的感受态细胞可在指数生长期后收获, 用 CaC I 处理, 所用的歩骤 在本领域众所周知。 可供选择的是用 MgC l 2。 如果需要, 转化也可用电穿孔的方 法进行。 当宿主是真核生物, 可选用如下的 DNA 转染方法: 磷酸钙共沉淀法, 或者常规机械方法如显微注射、 电穿孔、 脂质体包装等。 In the present invention, the polynucleotide encoding the human lipoprotein precursor protein signal peptide 14 or a recombinant vector containing the polynucleotide can be transformed or transduced into a host cell to form a genetically engineered host containing the polynucleotide or the recombinant vector. cell. The term "host cell" refers to a prokaryotic cell, such as a bacterial cell; or a lower eukaryotic cell, such as a yeast cell; or a higher eukaryotic cell, such as a mammalian cell. Representative examples are: E. coli, Streptomyces; bacterial cells such as Salmonella typhimurium; fungal cells such as yeast; plant cells; insect cells such as fly S2 or Sf 9; animal cells such as CH0, COS or Bowes melanoma cells, etc. Transforming a host cell with the DNA sequence of the present invention or a recombinant vector containing the DNA sequence can be performed by conventional techniques well known to those skilled in the art. When the host is a prokaryote such as E. coli, competent cells capable of absorbing DNA can be harvested after the exponential growth phase and treated with CaC I. The steps used are well known in the art. The alternative is to use MgC l 2 . If necessary, transformation can also be performed by electroporation. When the host is a eukaryotic organism, the following DNA transfection methods can be used: calcium phosphate co-precipitation method, or conventional mechanical methods such as microinjection, electroporation, and liposome packaging.
通过常规的重组 DNA 技术, 利用本发明的多核苷酸序列可用来表达或生产 重组的人脂蛋白前体蛋白信号肽 14 (Sc i ence, 1984 ; 224: 1431)。 一般来说有 以下歩骤:  By conventional recombinant DNA technology, the polynucleotide sequence of the present invention can be used to express or produce a recombinant human lipoprotein precursor protein signal peptide 14 (Scence, 1984; 224: 1431). Generally, the following steps are taken:
(1) .用本发明的编码人脂蛋白前体蛋白信号肽 14的多核苷酸(或变异体), 或用含有该多核苷酸的重组表达载体转化或转导合适的宿主细胞;  (1) using the polynucleotide (or variant) encoding the human lipoprotein precursor protein signal peptide 14 of the present invention, or transforming or transducing a suitable host cell with a recombinant expression vector containing the polynucleotide;
(2 ) .在合适的培养基中培养宿主细胞;  (2) culturing the host cell in a suitable medium;
( 3) .从培养基或细胞中分离、 纯化蛋白质。 在步骤 ( 2 ) 中, 根据所用的宿主细胞, 培养中所用的培养基可选自各种 常规培养基。 在适于宿主细胞生长的条件下进行培养。 当宿主细胞生长到适当 的细胞密度后, 用合适的方法(如温度转换或化学诱导)诱导选择的启动子, 将 细胞再培养一段时间。 (3) Isolate and purify protein from culture medium or cells. In step (2), depending on the host cell used, the medium used in the culture may be selected from various conventional mediums. Culture is performed under conditions suitable for host cell growth. After the host cells have grown to an appropriate cell density, the selected promoter is induced by a suitable method (such as temperature conversion or chemical induction), and the cells are cultured for a period of time.
在步驟 ( 3) 中, 重组多肽可包被于细胞内、 或在细胞膜上表达、 或分泌到 细胞外。 如果需要, 可利用其物理的、 化学的和其它特性通过各种分离方法分 离和纯化重组的蛋白。 这些方法是本领域技术人员所熟知的。 这些方法包括但 并不限于: 常规的复性处理、 蛋白沉淀剂处理(盐析方法)、 离心、 渗透破菌、 超声波处理、 超离心、 分子筛层析(凝胶过滤)、 吸附层析、 离子交换层析、 高 效液相层析(HPLC)和其它各种液相层析技术及这些方法的结合。 附图的简要说明  In step (3), the recombinant polypeptide may be coated in a cell, expressed on a cell membrane, or secreted outside the cell. If desired, recombinant proteins can be separated and purified by various separation methods using their physical, chemical and other properties. These methods are well known to those skilled in the art. These methods include, but are not limited to: conventional renaturation treatment, protein precipitant treatment (salting out method), centrifugation, osmotic disruption, ultrasonic treatment, ultracentrifugation, molecular sieve chromatography (gel filtration), adsorption chromatography, ion Exchange chromatography, high performance liquid chromatography (HPLC) and various other liquid chromatography techniques and combinations of these methods. Brief description of the drawings
下列附图用于说明本发明的具体实施方案, 而不用于限定由权利要求书所 界定的本发明范围。  The following drawings are used to illustrate specific embodiments of the invention, but not to limit the scope of the invention as defined by the claims.
图 1 为分离的人脂蛋白前体蛋白信号肽 14 的聚丙烯酰胺凝胶电泳图 (SDS - PAGE)。 14kDa为蛋白质的分子量。 箭头所指为分离出的蛋白条带。 实现本发明的最佳方式  Figure 1 shows the polyacrylamide gel electrophoresis (SDS-PAGE) of the isolated human lipoprotein precursor protein signal peptide 14. 14kDa is the molecular weight of the protein. The arrow indicates the isolated protein band. The best way to implement the invention
下面结合具体实施例, 进一步阐述本发明。 应理解, 这些实施例仅用于说明 本发明而不用于限制本发明的范围。 下列实施例中未注明具体条件的实验方法, 通常按照常规条件如 Sambrook 等人, 分子克隆: 实验室手册(New York: Cold Spring Harbor Laboratory Press, 1989)中所述的条件, 或按照制造厂商所建议 的条件。  The present invention is further described below with reference to specific embodiments. It should be understood that these examples are only used to illustrate the present invention and not to limit the scope of the present invention. In the following examples, the experimental methods without specific conditions are generally performed according to conventional conditions such as Sambrook et al., Molecular Cloning: The conditions described in the laboratory manual (New York: Cold Spring Harbor Laboratory Press, 1989), or according to the manufacturer Suggested conditions.
实施例 1: 人脂蛋白前体蛋白信号肽 14的克隆  Example 1: Cloning of human lipoprotein precursor protein signal peptide 14
用异硫氰酸胍 /酚 /氯仿一步法提取人胎脑总 RNA。 用 Quik mRNA Isolation Kit Human fetal brain total RNA was extracted by one-step method with guanidine isothiocyanate / phenol / chloroform. Using Quik mRNA Isolation Kit
(Qiegene 公司产品) 从总 RM中分离 poly (A) mRNA。 2ug poly (A) mRNA经逆转录 形成 cDNA。用 Smart cDNA克隆试剂盒(购自 Clontech )将 cDNA片段定向插入到 pBSK (+.) 载体(Clontech公司产品)的多克隆位点上, 转化 DH5a, 细菌形成 cDNA文库。 用 Dye terminate cycle react ion sequencing ki t (Perkin- Elmer公司产品) 和 ABI 377 自动测序仪(Perkin- Elmer公司)测定所有克隆的 5'和 3'末端的序列。 将测定的 cDNA 序列与已有的公共 DM序列数据库 (Genebank) 进行比较, 结果发现其中一个克隆 0558e09的 cDNA序列为新的 DNA。 通过合成一系列引物对该克隆所含的插入 cDNA片 段进行双向测定。 结果表明, 0558e09克隆所含的全长 cDNA为 2572bp (如 Seq IDN0: 1 所示) , 从第 619bp至 1038bp有一个 139bp的开放阅读框架 ( 0RF ) , 编码一个新的 蛋白质 (如 Seq ID NO: 2所示) 。 我们将此克隆命名为 pBS-0558e09, 编码的蛋白 质命名为人脂蛋白前体蛋白信号肽 14。 实施例 2: 用 RT-PCR方法克隆编码人脂蛋白前体蛋白信号肽 14的基因 (Qiegene product) Isolation of poly (A) mRNA from total RM. 2ug poly (A) mRNA is reverse transcribed to form cDNA. A Smart cDNA cloning kit (purchased from Clontech) was used to orient the cDNA fragment into the multiple cloning site of the pBSK (+.) Vector (Clontech) to transform DH5a. The bacteria formed a cDNA library. Dye terminate cycle reaction ion sequencing kit (Perkin-Elmer) and ABI 377 automatic sequencer (Perkin-Elmer) were used to determine the sequences at the 5 'and 3' ends of all clones. The determined cDNA sequence was compared with the existing public DM sequence database (Genebank), and it was found that the cDNA sequence of one of the clones 0558e09 was new DNA. Insert a cDNA fragment into the clone by synthesizing a series of primers Segments are measured in both directions. The results showed that the 0558e09 clone contained a full-length cDNA of 2572bp (as shown in Seq IDN0: 1), and a 139bp open reading frame (0RF) from 619bp to 1038bp, encoding a new protein (such as Seq ID NO: 2). We named this clone pBS-0558e09 and the encoded protein was named human lipoprotein precursor protein signal peptide 14. Example 2: Cloning of a gene encoding human lipoprotein precursor protein signal peptide 14 by RT-PCR
用胎脑细胞总 RNA为模板,以 oligo-dT为引物进行逆转录反应合成 cDNA,用 CDNA was synthesized using fetal brain total RNA as a template and oligo-dT as a primer.
Qiagene的试剂盒纯化后,用下列引物进行 PCR扩增: After purification of Qiagene's kit, PCR amplification was performed with the following primers:
Primer 1: 5'_GGAAAAATTTCTGTACATTTTCTCAA- 3' (SEQ ID NO: 3)  Primer 1: 5'_GGAAAAATTTCTGTACATTTTCTCAA- 3 '(SEQ ID NO: 3)
Primer2: 5,- GAGGAAACATAATCTGTATTTCAGTT- 3' (SEQ ID NO: 4)  Primer2: 5,-GAGGAAACATAATCTGTATTTCAGTT- 3 '(SEQ ID NO: 4)
Primerl为位于 SEQ ID NO: 1的 5'端的第 lbp开始的正向序列;  Primerl is a forward sequence starting at lbp at the 5 'end of SEQ ID NO: 1;
Primer 2为 SEQ ID NO: 1的中的 3'端反向序列。  Primer 2 is the 3 'end reverse sequence in SEQ ID NO: 1.
扩增反应的条件: 在 50μ 1的反应体积中含有 50匪 ol/L KC1, 10mmol/L Tris- CI, (pH8.5), 1.5mmol/L MgCl2, 200 μ mol/L dNTP, lOpmol引物, 1U的 Taq DNA聚合 酶(Clontech公司产品)。 在 PE9600型 DNA热循环仪(Perkin- Elmer公司)上按下列条 件反应 25个周期: 94。C 30sec; 55°C 30sec; 72°C 2min。 在 RT- PCR时同时设 β - act in 为阳性对照和模板空白为阴性对照。 扩增产物用 QIAGEN公司的试剂盒纯化, 用 TA 克隆试剂盒连接到 pCR载体上 ( Invitrogen公司产品) 。 DNA序列分析结果表明 PCR 产物的 DNA序列与 SEQ ID NO: 1所示的 1- 2572bp完全相同。 实施例 3: Northern 印迹法分析人脂蛋白前体蛋白信号肽 14基因的表达: Amplification reaction conditions: 50 μl of KC1, 10 mmol / L Tris-CI, (pH 8.5), 1.5 mmol / L MgCl 2 , 200 μ mol / L dNTP, lOpmol primers in a 50 μ 1 reaction volume , 1U Taq DNA polymerase (Clontech). The reaction was performed on a PE9600 DNA thermal cycler (Perkin-Elmer) for 25 cycles under the following conditions: 94. C 30sec; 55 ° C 30sec; 72 ° C 2min. During RT-PCR, β-act in was set as a positive control and template blank was set as a negative control. The amplified product was purified using a QIAGEN kit, and ligated to a pCR vector (Invitrogen product) using a TA cloning kit. The DNA sequence analysis results showed that the DNA sequence of the PCR product was exactly the same as that of 1-2572bp shown in SEQ ID NO: 1. Example 3: Northern blot analysis of human lipoprotein precursor protein signal peptide 14 gene expression:
用一歩法提取总 RNA[Anal. Biochem 1987, 162, 156-159] 0 该法包括酸性硫 氰酸胍苯酚 -氯仿抽提。 即用 4M异硫氰酸胍 -25mM柠檬酸钠, 0.2M乙酸钠 ( PH4.0 ) 对组织进行匀浆, 加入 1倍体积的苯酚和 1/5体积的氯仿-异戊醇 (49: 1) , 混合 后离心。 吸出水相层, 加入异丙醇 (0.8体积) 并将混合物离心得到 RM沉淀。 将 得到的 RNA沉淀用 70%乙醇洗涤, 干燥并溶于水中。 用 20 g RNA, 在含 20mM 3- ( N- 吗啉代) 丙磺酸 (pH7.0) - 5mM乙酸钠 -ImM EDTA- 2.2M甲醛的 1.2%琼脂糖凝胶上进 行电泳。 然后转移至硝酸纤维素膜上。 用 a- 32P dATP通过随机引物法制备 标记 的 DNA探针。 所用的 DNA探针为 PCR扩增的人脂蛋白前体蛋白信号肽 14编码区序列 (619bp至 1038bp)。 将 32P-标记的探针 (约 2 χ 106cpm/ml ) 与转移了 RNA的硝酸纤维 素膜在一溶液中于 42。C杂交过夜, 该溶液包含 50。/。甲酰胺- 25mM KH2P04 ( pH7.4 ) -5 xSSC- 5 xDenhardt's溶液和 20(^g/ml鲑精 DNA。 杂交之后, 将滤膜在 1 <SSC- 0.1。/。SDS中于 55°C洗 30min。 然后, 用 Phosphor Imager进行分析和定量。 实施例 4: 重组人脂蛋白前体蛋白信号肽 14的体外表达、 分离和纯化 Total RNA was extracted by a one-step method [Anal. Biochem 1987, 162, 156-159] 0 This method involves acid guanidinium thiocyanate-chloroform extraction. I.e. with 4M guanidinium isothiocyanate -25mM sodium citrate, 0.2M sodium acetate (P H4.0) of the tissue was homogenized phenol, 1 volume and 1/5 volume of chloroform - isoamyl alcohol (49: 1) Centrifuge after mixing. The aqueous layer was aspirated, isopropanol (0.8 vol) was added and the mixture was centrifuged to obtain RM precipitate. The resulting RNA pellet was washed with 70% ethanol, dried and dissolved in water. Using 20 g of RNA, electrophoresis was performed on a 1.2% agarose gel containing 20 mM 3- (N-morpholino) propanesulfonic acid (pH 7.0)-5 mM sodium acetate-ImM EDTA-2.2M formaldehyde. It was then transferred to a nitrocellulose membrane. A- 32 P dATP was used to prepare labeled DNA probes by random primer method. The DNA probe used was the human lipoprotein precursor protein signal peptide 14 coding region sequence (619bp to 1038bp) amplified by PCR. A 32P-labeled probe (approximately 2 x 10 6 cpm / ml) and an RNA-transferred nitrocellulose membrane were placed in a solution at 42 ° C. C hybridization overnight, this solution contains 50. /. Formamide-25mM KH 2 P0 4 (pH7.4) -5 xSSC- 5 xDenhardt's solution and 20 (^ g / ml salmon sperm DNA. After hybridization, the filter was set at 1 <SSC- 0.1. /. Wash in SDS at 55 ° C for 30 min. Then, Phosphor Imager was used for analysis and quantification. Example 4: In vitro expression, isolation and purification of recombinant human lipoprotein precursor protein signal peptide 14
根据 SEQ ID N0: 1和编码区序列, 设计出一对特异性扩增引物, 序列如下: Primer 3: 5'- CCCCATATGATAGCTATCATGTGTTTGAATCAGA- 3' ( Seq ID No: 5 ) Primer4: 5'- CCCGGATCCTCAGCATTCACAAAGGCAGCCAACC- 3' ( Seq ID No: 6 ) 此两段引物的 5'端分别含有 Ndel和 BamHI酶切位点, 其后分别为目的基因 5'端 和 端的编码序列, Ndel和 BamHI酶切位点相应于表达载体质粒 pET-28b(+) (Novagen 公司产品, Cat. No.69865.3)上的选择性内切酶位点。 以含有全长目的基因的 pBS - 0558e09质粒为模板, 进行 PCR反应。 PCR反应条件为: 总体积 50 μ 1中含 PBS_0558e09 质粒 10pg、 引物 Primer- 3和 Primer- 4分另1 J为 lOpmol、 Advantage polymerase MixBased on SEQ ID NO: 1 and the coding region sequence, a pair of specific amplification primers were designed, the sequence is as follows: Primer 3: 5'- CCCCATATGATAGCTATCATGTGTTTGAATCAGA- 3 '(Seq ID No: 5) Primer4: 5'- CCCGGATCCTCAGCATTCACAAAGGCAGCCAACC- 3' (Seq ID No: 6) The 5 ′ ends of these two primers contain Ndel and BamHI digestion sites, respectively, followed by the coding sequences of the 5 ′ end and the end of the target gene, respectively. The Ndel and BamHI digestion sites correspond to the expression vector Selective endonuclease site on plasmid pET-28b (+) (Novagen, Cat. No. 69865.3). PCR was performed using the pBS-0558e09 plasmid containing the full-length target gene as a template. The PCR reaction conditions were as follows: a total volume of 50 μ1 containing 10 pg of P BS_0558e09 plasmid, primers Primer-3 and Primer- 4 points, and 1 J for lpmol, Advantage polymerase Mix
( Clontech公司产品) 1 μ 1。 循环参数: 94°C 20s, 60°C 30s, 68°C 2 min,共 25个 循环。 用 Ndel和 BamHI分别对扩增产物和质粒 pET-28(+)进行双酶切,分别回收大片 段,并用 T4连接酶连接。 连接产物转化用氯化钙法大肠杆细菌 DH5a,在含卡那霉素(Clontech) 1 μ1. Cycle parameters: 94 ° C 20s, 60 ° C 30s, 68 ° C 2 min, a total of 25 cycles. Ndel and BamHI were used to double-digest the amplified product and plasmid pET-28 (+), respectively, and large fragments were recovered and ligated with T4 ligase. The ligation product was transformed into Ca. bacillus DH5a by the calcium chloride method.
(终浓度 30μ§/πι1 ) 的 LB平板培养过夜后, 用菌落 PCR方法筛选阳性克隆, 并进行 测序。 挑选序列正确的阳性克隆(pET- 0558e09) 用氯化钙法将重组质粒转化大肠 杆菌 BL21(DE3)plySs (Novagen公司产品)。 在含卡那霉素 (终浓度 30μ§/ηι1 ) 的 LB 液体培养基中, 宿主菌 BL21 (PET-0558e09) 在 37。C培养至对数生长期, 加入 IPTG 至终浓度 lmmol/L, 继续培养 5小时。 离心收集菌体, 经超声波破菌,离心收集上清, 用能与 6个组氨酸 ( 6His- Tag) 结合的亲和层析柱 His. Bind Quick CartridgeAfter the LB plate (final concentration of 30 μ § / πι1) was cultured overnight, the positive clones were selected by colony PCR method and sequenced. A positive clone (pET-0558e09) with the correct sequence was selected, and the recombinant plasmid was transformed into E. coli BL21 (DE3) plySs (product of Novagen) using the calcium chloride method. In containing kanamycin (final concentration of 30μ § / ηι1) in LB liquid medium, host strain BL21 (P ET-0558e09) at 37. C. Cultivate to logarithmic growth phase, add IPTG to a final concentration of 1 mmol / L, and continue incubating for 5 hours. The bacteria were collected by centrifugation, and the supernatant was collected by centrifugation by ultrasonication. An affinity column His. Bind Quick Cartridge capable of binding to 6 histidines (6His-Tag) was used.
(Novagen公司产品) 进行层析, 得到了纯化的目的蛋白人脂蛋白前体蛋白信号肽 14。 经 SDS-PAGE电泳, 在 14kDa处得到一单一的条带 (图 1 ) 。 将该条带转移至 PVDF 膜上用 Edams水解法进行 N-端氨基酸序列分析, 结果 N-端 15个氨基酸与 SEQ ID NO: 2 所示的 N-端 15个氨基酸残基完全相同。 实施例 5 抗人脂蛋白前体蛋白信号肽 14抗体的产生 (Novagen) chromatography was performed to obtain purified human lipoprotein precursor protein signal peptide 14 of interest. After SDS-PAGE electrophoresis, a single band was obtained at 14 kDa (Figure 1). The band was transferred to a PVDF membrane and the N-terminal amino acid sequence was analyzed by Edams hydrolysis method. As a result, the 15 amino acids at the N-terminus were identical to the 15 amino acid residues at the N-terminus shown in SEQ ID NO: 2. Example 5 Production of anti-human lipoprotein precursor protein signal peptide 14 antibodies
用多肽合成仪 (PE公司产品) 合成下述人脂蛋白前体蛋白信号肽 14特异性的 多肽:  The following peptides specific for human lipoprotein precursor protein signal peptide 14 were synthesized using a peptide synthesizer (product of PE):
NH2-Met-Cys-Leu-Asn-Gln-Arg-Phe-Glu-Leu-Tyr-Tyr-Leu-Glu-Asn-Asp- C00H (SEQ ID NO: 7)。 将该多肽分别与血蓝蛋白和牛血清白蛋白耦合形成复合, 方法参见: Avrameas, et al. Iramunochemistry, 1969; 6: 43。 用 4mg上述血蓝蛋白 多肽复合物加上完全弗氏佐剂免疫家兔, 15天后再用血蓝蛋白多肽复合物加不完 全弗氏佐剂加强免疫一次。 采用经 15 g/ml牛血清白蛋白多肽复合物包被的滴定 板做 EU SA测定兔血清中抗体的滴度。 用蛋白 A-Sepharose从抗体阳性的家免血清 中分离总 IgG。将多肽结合于溴化氰活化的 Sepharose4B柱上,用亲和层析法从总 IgG 中分离抗多肽抗体。 免疫沉淀法证明纯化的抗体可特异性地与人脂蛋白前体蛋白 信号肽 14结合。 实施例 6: 本发明的多核苷酸片段用作杂交探针的应用 NH 2 -Met-Cys-Leu-Asn-Gln-Arg-Phe-Glu-Leu-Tyr-Tyr-Leu-Glu-Asn-Asp- C00H (SEQ ID NO: 7). The polypeptide is coupled to hemocyanin and bovine serum albumin to form a complex, respectively. For methods, see: Avrameas, et al. Iramunochemistry, 1969; 6: 43. With 4mg of hemocyanin Peptide complex plus complete Freund's adjuvant was used to immunize rabbits. After 15 days, hemocyanin peptide complex plus incomplete Freund's adjuvant was used to boost immunity once. A titer plate coated with a 15 g / ml bovine serum albumin peptide complex was used as EU SA to determine the antibody titer in rabbit serum. Protein A-Sepharose was used to isolate total IgG from antibody-positive home free serum. The peptide was bound to a cyanogen bromide-activated Sepharose4B column, and anti-peptide antibodies were separated from the total IgG by affinity chromatography. The immunoprecipitation method proved that the purified antibody could specifically bind to human lipoprotein precursor protein signal peptide 14. Example 6: Application of the polynucleotide fragment of the present invention as a hybridization probe
从本发明的多核苷酸中挑选出合适的寡核苷酸片段用作杂交探针有多方面的 用途, 如用该探针可与不同来源的正常组织或病理组织的基因组或 cDNA文库杂交 以鉴定其是否含有本发明的多核苷酸序列和检出同源的多核苷酸序列,进一歩还可 用该探针检测本发明的多核苷酸序列或其同源的多核苷酸序列在正常组织或病理 组织细胞中的表达是否异常。  Suitable oligonucleotide fragments selected from the polynucleotides of the present invention are used as hybridization probes in a variety of ways. For example, the probes can be used to hybridize to genomic or cDNA libraries of normal tissue or pathological tissue from different sources to It is identified whether it contains the polynucleotide sequence of the present invention and a homologous polynucleotide sequence is detected. Further, the probe can also be used to detect the polynucleotide sequence of the present invention or its homologous polynucleotide sequence in normal tissues or Whether the expression in pathological tissue cells is abnormal.
本实施例的目的是从本发明的多核苷酸 SEQ ID NO: 1 中挑选出合适的寡核苷 酸片段用作杂交探针, 并用滤膜杂交方法鉴定一些组织中是否含有本发明的多核 苷酸序列或其同源的多核苷酸序列。 滤膜杂交方法包括斑点印迹法、 Southern 印 迹法、 Nor thern 印迹法和复印方法等, 它们都是将待测的多核苷酸样品固定在滤 膜上后使用基本相同的步骤杂交。 这些相同的步骤是: 固定了样品的滤膜首先用 不含探针的杂交缓冲液进行预杂交, 以使滤膜上样品的非特异性的结合部位被载 体和合成的多聚物所饱和。 然后预杂交液被含有标记探针的杂交缓冲液替换, 并 保温使探针与靶核酸杂交。 杂交步骤之后, 未杂交上的探针被一系列洗膜歩骤除 掉。 本实施例利用较高强度的洗膜条件 (如较低盐浓度和较高的温度), 以使杂交 背景降低且只保留特异性强的信号。 本实施例选用的探针包括两类: 第一类探针 是完全与本发明的多核苷酸 SEQ ID NO: 1相同或互补的寡核苷酸片段; 第二类探 针是部分与本发明的多核苷酸 SEQ ID NO: 1相同或互补的寡核苷酸片段。 本实施 例选用斑点印迹法将样品固定在滤膜上, 在较高强度的的洗膜条件下, 第一类探 针与样品的杂交特异性最强而得以保留。  The purpose of this embodiment is to select a suitable oligonucleotide fragment from the polynucleotide SEQ ID NO: 1 of the present invention as a hybridization probe, and to identify whether some tissues contain the polynucleoside of the present invention by a filter hybridization method. Acid sequence or a homologous polynucleotide sequence thereof. Filter hybridization methods include dot blotting, Southern imprinting, Nor thern blotting, and copying methods. They all use the same steps to fix the polynucleotide sample to be tested on the filter and then hybridize. These same steps are as follows: The sample-immobilized filter is first pre-hybridized with a probe-free hybridization buffer to saturate the non-specific binding site of the sample on the filter with the carrier and the synthesized polymer. The pre-hybridization solution is then replaced with a hybridization buffer containing labeled probes and incubated to hybridize the probes to the target nucleic acid. After the hybridization step, unhybridized probes are removed by a series of membrane washes. This embodiment uses higher-intensity washing conditions (such as lower salt concentration and higher temperature) to reduce the hybridization background and retain only strong specific signals. The probes used in this embodiment include two types: the first type of probes are oligonucleotide fragments that are completely the same as or complementary to the polynucleotide SEQ ID NO: 1 of the present invention; the second type of probes are partially related to the present invention The polynucleotide SEQ ID NO: 1 is the same or complementary oligonucleotide fragment. In this example, the dot blot method is used to fix the sample on the filter membrane. Under the high-intensity washing conditions, the first type of probe and the sample have the strongest hybridization specificity and are retained.
一、 探针的选用 First, the selection of the probe
从本发明的多核苷酸 SEQ ID NO: 1 中选择寡核苷酸片段用作杂交探针, 应遵 循以下原则和需要考虑的几个方面:  The selection of oligonucleotide fragments for use as hybridization probes from the polynucleotide SEQ ID NO: 1 of the present invention should follow the following principles and several aspects to be considered:
1, 探针大小优选范围为 18-50个核苷酸; 1. The preferred range of probe size is 18-50 nucleotides;
2 , GC含量为 30%-70%, 超过则非特异性杂交增加; 3, 探针内部应无互补区域; 2, GC content is 30% -70%, non-specific hybridization increases when it exceeds; 3. There should be no complementary regions inside the probe;
4, 符合以上条件的可作为初选探针, 然后进一步作计算机序列分析, 包括将该 初选探针分别与其来源序列区域 (即 SEQ ID NO: 1 ) 和其它已知的基因组序 列及其互补区进行同源性比较, 若与非靶分子区域的同源性大于 85%或者有超 过 15个连续碱基完全相同, 则该初选探针一般就不应该使用;  4. Those that meet the above conditions can be used as primary selection probes, and then further computer sequence analysis, including the primary selection probe and its source sequence region (ie, SEQ ID NO: 1) and other known genomic sequences and their complements The regions are compared for homology. If the homology with the non-target molecular region is greater than 85% or there are more than 15 consecutive bases, the primary probe should not be used;
5, 初选探针是否最终选定为有实际应用价值的探针还应进一步由实验确定。  5. Whether the preliminary selection probe is finally selected as a probe with practical application value should be further determined by experiments.
完成以上各方面的分析后挑选并合成以下二个探针:  After completing the above analysis, select and synthesize the following two probes:
探针 1 (probel ), 属于第一类探针, 与 SEQ ID NO: 1 的基因片段完全同源 或互补 ( 41Nt )  Probe 1 (probel), which belongs to the first type of probe, is completely homologous or complementary to the gene fragment of SEQ ID NO: 1 (41Nt)
5'-GATGTAAATCAGATGATTAGAGACATTTCGCTATCATCGAA-3' ( SEQ ID NO: 8 ) 探针 2 (probe2), 属于第二类探针, 相当于 SEQ ID NO: 1 的基因片段或其 互补片段的替换突变序列 (41Nt):  5'-GATGTAAATCAGATGATTAGAGACATTTCGCTATCATCGAA-3 '(SEQ ID NO: 8) Probe 2 (probe2), which belongs to the second type of probe, is equivalent to the replacement mutation sequence (41Nt) of the gene fragment of SEQ ID NO: 1 or its complementary fragment:
5 ' -GCTCTACATCCGATCATTCGAGACATCTCGCTATCATCGCA-3' ( SEQ ID NO: 9 ) 与以下具体实验步骤有关的其它未列出的常用试剂及其配制方法请参考文 献: DNA PROBES G. H. Kel ler; M. M. Manak; Stockton Press, 1989 (USA)以及更常 用的分子克隆实验手册书籍如 《分子克隆实验指南》 U998 年第二版) [美]萨姆 布鲁克等著, 科学出版社。  5 '-GCTCTACATCCGATCATTCGAGACATCTCGCTATCATCGCA-3' (SEQ ID NO: 9) For other commonly used reagents and their preparation methods not related to the following specific experimental steps, please refer to the literature: DNA PROBES GH Kel ler; MM Manak; Stockton Press, 1989 ( USA) and more commonly used molecular cloning experiment manual books such as "Molecular Cloning Experiment Guide" (U998 Second Edition) [US] Sambrook et al., Science Press.
样品制备:  Sample Preparation:
1, 从新鲜或冰冻组织中提取 DNA 1. Extract DNA from fresh or frozen tissue
歩骤: 1 ) 将新鲜或新鲜解冻的正常肝组织放入浸在冰上并盛有磷酸盐缓冲液 (PBS) 的平皿中。 用剪刀或手术刀将组织切成小块。 操作中应保持组织湿润。 2 ) 以 lOOOg离心切碎组织 10分钟。 3)用冷匀浆缓冲液 ( 0.25mol/L蔗糖; 25腿 pl/L Tris-HCl, pH7.5; 25腿 ol/LnaCl; 25mmoi/L MgCl2 ) 悬浮沉淀 (大约 10ml/g )。 4) 在 4 C用电动匀浆器以全速匀浆组织悬液, 直至组织被完全破碎。 5) lOOOg 离心 10分钟。 6) 用重悬细胞沉淀 (每 0. lg最初组织样品加 1- 5ml), 再以 lOOOg离心 10分钟。 7) 用裂解缓冲液重悬沉淀 (每 O. lg最初组织样品加 lml ), 然后接以下 的苯酚抽提法。 Steps: 1) Place fresh or freshly thawed normal liver tissue in a plate immersed in ice and filled with phosphate buffered saline (PBS). Cut the tissue into small pieces with scissors or a scalpel. Keep tissue moist during operation. 2) Centrifuge the tissue at 1,000 g for 10 minutes. 3) Suspend the pellet (about 10 ml / g) with cold homogenization buffer (0.25 mol / L sucrose; 25 legs pl / L Tris-HCl, pH 7.5; 25 legs ol / LnaCl; 25 mmoi / L MgCl 2 ). 4) At 4 C, homogenize the tissue suspension at full speed with an electric homogenizer until the tissue is completely broken. 5) Centrifuge at 1000g for 10 minutes. 6) Resuspend the cell pellet (add 1-5 ml per 0.1 g of the original tissue sample), and centrifuge at 1,000 g for 10 minutes. 7) Resuspend the pellet in lysis buffer (1 ml per 0.1 g of the initial tissue sample), and then follow the phenol extraction method below.
2, DNA的苯酚抽提法 2, DNA phenol extraction method
歩骤: 1) 用 1- 10ml 冷 PBS 洗细胞, 1000g 离心 10分钟。 2) 用冷细胞裂解 液重悬浮沉淀的细胞 ( 1 X 108细胞 /ml ) 最少应用 lOOul 裂解缓冲液。 3) 加 SDS 至终浓度为 1%, 如果在重悬细胞之前将 SDS直接加入到细胞沉淀中, 细胞可能会 形成大的团块而难以破碎, 并降低的总产率。 这一点在抽提 >107细胞时特别严重,. 4) 加蛋白酶 K至终浓度 200ug/ml。 5) 50°C保温反应 1 小时或在 37 C轻轻振摇 过夜。 6) 用等体积苯酚: 氯仿: 异戊醇 ( 25: 24: 1 ) 抽提, 在小离心机管中离 心 10分钟。 两相应清楚分离, 否则重新进行离心。 7) 将水相转移至新管。 8) 用 等体积氯仿: 异戊醇 (24: 1)抽提, 离心 10分钟。 9) 将含 DNA的水相转移至新 管。 然后进行 DM的纯化和乙醇沉淀。 Steps: 1) Wash cells with 1-10 ml of cold PBS and centrifuge at 1000g for 10 minutes. 2) with cold cell lysate pelleted cells were resuspended (1 X 10 8 cells / ml) Minimum application lOOul lysis buffer. 3) Add SDS to a final concentration of 1%. If SDS is added directly to the cell pellet before resuspending the cells, the cells may form large clumps that are difficult to break, and reduce the overall yield. This is particularly serious when extracting> 10 7 cells. 4) Add proteinase K to a final concentration of 200u g / ml. 5) Incubate at 50 ° C for 1 hour or shake gently at 37 C overnight. 6) Extract with an equal volume of phenol: chloroform: isoamyl alcohol (25: 24: 1) and centrifuge in a small centrifuge tube for 10 minutes. The two should be clearly separated, otherwise centrifuge again. 7) Transfer the water phase to a new tube. 8) Extract with an equal volume of chloroform: isoamyl alcohol (24: 1) and centrifuge for 10 minutes. 9) Transfer the aqueous phase containing DNA to a new tube. Purification of DM and ethanol precipitation were then performed.
3, DNA的纯化和乙醇沉淀 3, DNA purification and ethanol precipitation
歩骤: 1 ) 将 1/10体积 2mol/L醋酸钠和 2倍体积冷 100%乙醇加到 DNA溶液 中, 混匀。 在- 20DC放置 1小时或至过夜。 2) 离心 10分钟。 3) 小心吸出或倒出 乙醇。 4)用 70%冷乙醇 500ul 洗涤沉淀, 离心 5分钟。 5) 小心吸出或倒出乙醇。 用 500ul冷乙醇洗涤沉淀, 离心 5分钟。 6) 小心吸出或倒出乙醇, 然后在吸水纸 上倒置使残余乙醇流尽。 空气干燥 10-15 分钟, 以使表面乙醇挥发。 注意不要使 沉淀完全干燥, 否则较难重新溶解。 7) 以小体积 TE或水重悬 DNA 沉淀。 低速涡 旋振荡或用滴管吹吸, 同时逐渐增加 TE, 混合至 DNA充分溶解, 每 1-5 X 10'1细胞 所提取的大约加 lul。 Steps: 1) Add 1/10 volume of 2mol / L sodium acetate and 2 volumes of cold 100% ethanol to the DNA solution and mix. Leave at -20 DC for 1 hour or overnight. 2) Centrifuge for 10 minutes. 3) Carefully aspirate or pour out the ethanol. 4) Wash the pellet with 500ul of 70% cold ethanol and centrifuge for 5 minutes. 5) Carefully aspirate or pour out the ethanol. Wash the pellet with 500ul of cold ethanol and centrifuge for 5 minutes. 6) Carefully aspirate or pour out the ethanol, then invert on the absorbent paper to drain off the residual ethanol. Air dry for 10-15 minutes to allow the surface ethanol to evaporate. Be careful not to allow the pellet to dry completely, otherwise it will be more difficult to re-dissolve. 7) Resuspend the DNA pellet in a small volume of TE or water. Vortex at low speed or pipette with suction, while gradually increasing TE, mix until the DNA is fully lysed, add approximately 1 ul per 1-5 X 10 ' 1 cell extraction.
以下第 8-13歩骤仅用于必须除去污染时, 否则可直接进行第 14歩驟。  The following steps 8-13 are only used when contamination must be removed, otherwise step 14 can be performed directly.
8 ) 将 RNA酶 A加到 DNA溶液中, 终浓度为 100ug/ml, 37°C保温 30分钟。 9 ) 加 入 SDS和蛋白酶 K, 终浓度分别为 0.5%和 100ug/ml。 37°C保温 30分钟。 10) 用 等体积的苯酚: 氯仿: 异戊醇 ( 25: 24: 1)抽提反应液, 离心 10 分钟。 11 ) 小 心移出水相, 用等体积的氯仿: 异戊醇 (24: 1 ) 重新抽提, 离心 10 分钟。 12 ) 小心移出水相, 力卩 1/10体积 2mol/L 醋酸钠和 2.5 体积冷乙醇, 混匀置 -20°C 1 小时。 13) 用 70%乙醇及 100%乙醇洗涤沉淀, 空气干燥, 重悬核酸, 过程同第 3- 6步骤。 14) 测定 A26Q和 A28。以检测 DM的纯度及产率。 15) 分装后存放于 -20。C。 样膜的制备: 8) Add RNase A to the DNA solution to a final concentration of 100ug / ml, and incubate at 37 ° C for 30 minutes. 9) Add SDS and proteinase K, the final concentrations are 0.5% and 100ug / ml. Incubate at 37 ° C for 30 minutes. 10) Extract the reaction solution with an equal volume of phenol: chloroform: isoamyl alcohol (25: 24: 1) and centrifuge for 10 minutes. 11) Carefully remove the aqueous phase and re-extract with an equal volume of chloroform: isoamyl alcohol (24: 1) and centrifuge for 10 minutes. 12) Carefully remove the water phase, mix 1/10 volume of 2mol / L sodium acetate and 2.5 volume of cold ethanol, and mix well at -20 ° C for 1 hour. 13) Wash the pellet with 70% ethanol and 100% ethanol, air dry, and resuspend the nucleic acid. The process is the same as steps 3-6. 14) Determine A 26Q and A 28 . To check the purity and yield of DM. 15) Store at -20 after packing. C. Preparation of sample film:
1) 取 4x 2 张适当大小的硝酸纤维素膜 (NC 膜), 用铅笔在其上轻轻标出点样 位置及样号, 每一探针需两张 NC膜, 以便在后面的实验步骤中分别用高强度条件 和强度条件洗膜 。  1) Take 4x 2 pieces of nitrocellulose membranes (NC membranes) of appropriate size, and mark the spotting position and sample number on it with a pencil. Two NC membranes are required for each probe, so that it can be used in the following experimental steps. The film was washed with high-strength conditions and strength conditions, respectively.
2) 吸取及对照各 15微升, 点于样膜上, 在室温中晾干。  2) Pipette and control 15 microliters each, spot on the sample film, and dry at room temperature.
3 ) 置于浸润有 0. Imol/LNaOH, 1.5mol/LNaCl的滤纸上 5分钟 (两次), 晾干置 于浸润有 0.5raol/L Tris-HCl ( pH7.0 ), 3mol/LNaCl的滤纸上 5分钟 (两次), 晾 干。  3) Place on filter paper impregnated with 0.1 mol / L NaOH, 1.5 mol / L NaCl for 5 minutes (twice), dry and place on filter paper impregnated with 0.5 raol / L Tris-HCl (pH 7.0), 3 mol / L NaCl Allow to dry for 5 minutes (twice).
4) 夹于干净滤纸中, 以铝箔包好, 60-80°C真空干燥 2小时。  4) Clamped in clean filter paper, wrapped in aluminum foil, and dried under vacuum at 60-80 ° C for 2 hours.
探针的标记 1 ) 3 μ IProbe ( 0. lOD/10 μ 1 ), 加入 2 μ IKinase缓冲液, 8-10 uCi γ- 32P- dATP+2U Kinase, 以补加至终体积 20 μ 1。 Labeling of probes 1) 3 μ IProbe (0.1 OD / 10 μ 1), add 2 μ IKinase buffer, 8-10 uCi γ- 32 P- dATP + 2U Kinase, to make up to a final volume of 20 μ 1.
2 ) 37°C 保温 2小时。  2) Incubate at 37 ° C for 2 hours.
3) 加 1/5体积的溴酚蓝指示剂 ( BPB)。  3) Add 1/5 volume of bromophenol blue indicator (BPB).
4 ) 过 Sephadex G-50柱。  4) Pass through a Sephadex G-50 column.
5 ) 至有 32P-Probe洗出前开始收集第一峰(可用 Monitor监测;)。 5) Start collecting the first peak before 32 P-Probe washes out (can be monitored by Monitor;).
6 ) 5滴 /管, 收集 10-15管。  6) 5 drops / tube, collect 10-15 tubes.
7 ) 用液体闪烁仪监测同位素量  7) Monitor the amount of isotope with a liquid scintillator
8 ) 合并第一峰的收集液后即为所需制备的 32P- Probe (第二峰为游离 γ-32Ρ - dATP )。 8) After combining the collection solutions of the first peak, the 32 P-Probe (the second peak is free γ- 32P -dATP) is prepared.
预杂交  Pre-hybridization
将样膜置于塑料袋中,加入 3- 10mg预杂交液( 10xDenhardt's; 6xSSC, 0. lmg/ml CT DNA (小牛胸腺 DNA)。), 封好袋口后, 68°C水浴摇 2小时。  Put the sample film in a plastic bag, add 3-10 mg of pre-hybridization solution (10xDenhardt's; 6xSSC, 0.1 mg / ml CT DNA (calf thymus DNA).), Seal the bag, and shake at 68 ° C for 2 hours in a water bath .
杂交  Cross
将塑料袋剪去一角, 加入制备好的探针, 封好袋口后, 42°C水浴摇过夜。 洗膜:  Cut a corner of the plastic bag, add the prepared probe, seal the bag, and shake it at 42 ° C in a water bath overnight. Wash film:
高强度洗膜:  High-intensity washing film:
1 ) 取出已杂交好的样膜。  1) Take out the hybridized sample membrane.
2 ) 2xSSC, 0.1%SDS中, 40。C洗 15分钟 ( 2次)。  2) 2xSSC, 0.1% SDS, 40. C Wash for 15 minutes (twice).
3 ) 0. lxSSC, 0.1%SDS中, 40°C洗 15分钟 ( 2次)。  3) 0.1xSSC, 0.1% SDS, wash at 40 ° C for 15 minutes (twice).
4 ) 0. lxSSC, 0.1%SDS中, 55°C洗 30分钟 (2次), 室温晾干。 低强度洗膜:  4) In 0.1xSSC, 0.1% SDS, wash at 55 ° C for 30 minutes (twice), and dry at room temperature. Low-intensity washing film:
1 ) 取出已杂交好的样膜。  1) Take out the hybridized sample membrane.
2 ) 2xSSC, 0.1%SDS中, 37°C洗 15分钟 ( 2次)。  2) 2xSSC, 0.1% SDS, wash at 37 ° C for 15 minutes (twice).
3 ) 0. lxSSC, 0.1%SDS中, 37°C洗 15分钟 ( 2次)。  3) 0.1xSSC, 0.1% SDS, wash at 37 ° C for 15 minutes (twice).
4 ) 0. lxSSC, 0.1%SDS中, 40。C洗 15分钟 (2次), 室温晾干。  4) 0.1xSSC, 0.1% SDS, 40. Wash for 15 minutes (twice) and dry at room temperature.
X -光自显影: X-ray autoradiography:
-70°C, X-光自显影 (压片时间根据杂交斑放射性强弱而定)。  -70 ° C, X-ray autoradiography (pressing time depends on the radioactivity of the hybrid spot).
实验结果:  Experimental results:
采用低强度洗膜条件所进行的杂交实验, 以上四个探针杂交斑放射性强弱没 有明显区别; 而采用低强度洗膜条件所进行的杂交实验, 探针 1 的杂交斑放射性 强度明显强于其它三个探针杂交斑的放射性强度。 因而可用探针 1 定性和定量地 分析本发明的多核苷酸在不同组织中的存在和差异表达。 实施例 7 DNA Microarray The hybridization experiment using low-intensity membrane washing conditions showed that the radioactivity of the hybrid spots of the above four probes was not strong. There are obvious differences; and in the hybridization experiment using low-intensity washing conditions, the radioactive intensity of the hybrid spot of probe 1 is significantly stronger than that of the other three probe hybrid spots. Therefore, probe 1 can be used to qualitatively and quantitatively analyze the presence and differential expression of the polynucleotide of the present invention in different tissues. Example 7 DNA Microarray
基因芯片或基因微矩阵 (DNA Microarray) 是目前许多国家实验室和大制药 公司都在着手研制和开发的新技术, 它是指将大量的靶基因片段有序地、 高密度 地排列在玻璃、 硅等载体上, 然后用荧光检测和计算机软件进行数据的比较和分 析, 以达到快速、 高效、 高通量地分析生物信息的目的。 本发明的多核苷酸可作 为靶 DNA 用于基因芯片技术用于高通量研究新基因功能; 寻找和筛选组织特异性 新基因特别是肿瘤等疾病相关新基因; 疾病的诊断, 如遗传性疾病。 其具体方法 步骤在文献中已有多种报道, 如可参阅文献 DeRisi, J. L. , Lyer, V. &Brown, P.0. (1997) Science278, 680-686.及文献 Helle, R. A. , Schema, M. , Chai, A. , Shalom, D. , (1997) PNAS 94: 2150-2155.  Gene microarrays or DNA microarrays are new technologies currently being developed by many national laboratories and large pharmaceutical companies. It refers to the orderly and high-density arrangement of large numbers of target gene fragments on glass, The data is compared and analyzed on a carrier such as silicon using fluorescence detection and computer software to achieve the purpose of rapid, efficient, and high-throughput analysis of biological information. The polynucleotide of the present invention can be used as target DNA for gene chip technology for high-throughput research of new gene functions; search for and screen new tissue-specific genes, especially new genes related to diseases such as tumors; diagnosis of diseases such as hereditary diseases . The specific method steps have been reported in the literature. For example, see DeRisi, JL, Lyer, V. & Brown, P.0. (1997) Science 278, 680-686. And Helle, RA, Schema, M. , Chai, A., Shalom, D., (1997) PNAS 94: 2150-2155.
(一 ) 点样  (A) spotting
各种不同的全长 cDNA共计 4000条多核苷酸序列作为靶 DNA,其中包括本发明 的多核苷酸。 将它们分别通过 PCR 进行扩增, 纯化所得扩增产物后将其浓度调到 500ng/ul 左右, 用 Cartesian 7500 点样仪(购自美国 Cartesian公司)点于玻璃 介质上, 点与点之间的距离为 280 μπι。 将点样后的玻片进行水合、 干燥、 置于紫 外交联仪中交联, 洗脱后干燥使 DNA 固定在玻璃片上制备成芯片。 其具体方法歩 骤在文献中已有多种报道, 其具体方法步驟在文献中已有多种报道, 本实施例的 点样后处理步骤是:  A total of 4,000 polynucleotide sequences of various full-length cDNAs are used as target DNA, including the polynucleotide of the present invention. They were respectively amplified by PCR. After purification, the concentration of the amplified product was adjusted to about 500 ng / ul, and spotted on a glass medium using a Cartesian 7500 spotter (purchased from Cartesian, USA). The distance is 280 μπι. The spotted slides were hydrated, dried, and cross-linked in a purple diplomatic coupling instrument. After elution, the DNA was fixed on a glass slide to prepare a chip. The specific method steps have been reported in the literature in various ways, and the specific method steps have been reported in the literature in various ways. The spotting post-processing steps of this embodiment are:
1. 潮湿环境中水合 4小时;  1. Hydration in a humid environment for 4 hours;
2. 0.2%SDS洗涤 1分钟;  2. 0.2% SDS was washed for 1 minute;
3. ddH20洗涤两次, 每次 1分钟; 3. Wash twice with ddH 2 0 for 1 minute each time;
4. NaBH4封闭 5分钟; 4. NaBH 4 is blocked for 5 minutes;
5. 95°C水中 2分钟;  5. 95 ° C water for 2 minutes;
6. 0.2%SDS洗涤 1分钟;  6. Wash with 0.2% SDS for 1 minute;
7. ddH20冲洗两次; 7. Rinse twice with ddH 2 0;
8. 凉干, 25 C储存于暗处备用。  8. Dry and store at 25 C in the dark for future use.
(二) 探针标记  (2) Probe marking
用一歩法分别从正常肝与肝癌中抽提总 mRNA, 并用 Oligotex mRNA Midi Kit (购自 QiaGen公司)纯化 mRNA,通过反转录分别将荧光试剂 Cy3dUTP (5-Amino- propargy 1~2· -deoxyur i dine 5' -tr iphate coupled to Cy3 fluorescent dye , 购自 Amersham Phamacia Biotech 公司)标记正常 |£组织的 mRNA, 用荧光试剂 Cy5dUTP (5-Amino-propargyl-2' -deoxyur i dine 5*-tr iphate coupled to Cy5 fluorescent dye, 购自 Amersham Phamacia Biotech公司)标记肝癌组织 mRNA, 经 纯 化 后 制 备 出 探 针 。 具 体 步 骤 参 照 及 方 法 Schena, M. , Shalon, D. , Heller, R. (1996) Proc. Natl. Acad. Sci. USA. Vol.93: 10614- 10619. Schena, M. , Shalon, Dar i. , Davis, R. W. (1995) Science.270. (20) : 467-480. (三) 杂交 Total mRNA was extracted from normal liver and liver cancer by one-stroke method, and Oligotex mRNA Midi Kit (purchased from QiaGen) was used to purify mRNA, and the fluorescent reagent Cy3dUTP (5-Amino- propargy 1 ~ 2 · -deoxyur i dine 5 '-tr iphate coupled to Cy3 fluorescent dye was purchased from Amersham Phamacia Biotech Company by reverse transcription. ) Mark normal tissue mRNA. Mark liver cancer tissue mRNA with Cy5dUTP (5-Amino-propargyl-2 '-deoxyur i dine 5 * -tr iphate coupled to Cy5 fluorescent dye, purchased from Amersham Phamacia Biotech). Probes were prepared after purification. Specific steps refer to and methods Schena, M., Shalon, D., Heller, R. (1996) Proc. Natl. Acad. Sci. USA. Vol. 93: 10614- 10619. Schena, M., Shalon, Dar i. Davis, RW (1995) Science.270. (20): 467-480. (3) Hybridization
分别将来自 以上两种组织的探针与芯片一起在 UniHyb™ Hybridization Solution (购自 TeleChem 公司)杂交液中进行杂交 16 小时, 室温用洗涤液 ( 1 χ SSC, 0.2%SDS ) 洗涤后用 ScanArray 3000扫描仪 (购自美国 General Scanning公 司) 进行扫描, 扫描的图象用 Imagene软件 (美国 Biodiscovery公司) 进行数据 分析处理, 算出每个点的 Cy3/Cy5 比值, 该比值小于 0.5大于 2 的点被认为是表 达有差异的基因。  Probes from the above two tissues and chips were hybridized in a UniHyb ™ Hybridization Solution (purchased from TeleChem) hybridization solution for 16 hours, washed with a washing solution (1 x SSC, 0.2% SDS) at room temperature, and then scanned with ScanArray 3000. Scanner (purchased from General Scanning Company, USA) for scanning. The scanned image is processed by Imagene software (Biodiscovery Company, USA) for data analysis, and the Cy3 / Cy5 ratio of each point is calculated. The points whose ratio is less than 0.5 and greater than 2 are considered Genes with differential expression.
实验结果表明, Cy 3 s i gna 1 = 1760.92 (取四次实验的平均值), Cy 5 s i gna 1 = 4735.54 (取四次实验的平均值) , C y 3 / C y 5 = 0.371851995759723 ,本发明的多核苷酸在以 上两种组织中的表达有明显差异, 表明本发明的多核苷酸与肝癌密切相关。 工业实用性 Experimental results show that Cy 3 si gna 1 = 1760.92 (average of four experiments), Cy 5 si gna 1 = 4735.54 (average of four experiments), C y 3 / C y 5 = 0.371851995759723, the present invention The expression of the polynucleotide in the above two tissues is significantly different, indicating that the polynucleotide of the present invention is closely related to liver cancer. Industrial applicability
本发明的多肽以及该多肽的拮抗剂、 激动剂和抑制剂可直接用于疾病治疗, 例如, 可治疗恶性肿瘤、 肾上腺缺乏症、 皮肤病、 各类炎症、 HIV感染和免疫性疾 病等。  The polypeptides of the present invention, as well as antagonists, agonists and inhibitors of the polypeptides, can be directly used in the treatment of diseases, for example, they can treat malignant tumors, adrenal deficiency, skin diseases, various types of inflammation, HIV infection, and immune diseases.
脂蛋白的前体蛋白的信号肽上的保守序列决定了该蛋白是否进行脂修饰。 因 此, 这段信号肽序列可以治疗或预防由于信号肽合成异常而缺乏正常功能的脂蛋 白而导致的疾病, 例如阿尔兹海默氏症、 脑瘤、 外源 /内源性脂血症、 家族性高胆 固醇血症、 胆固醇脂储藏病、 脂肪肝、 肝癌和冠心病等疾病。  The conserved sequence on the signal peptide of the precursor protein of lipoprotein determines whether the protein is lipid modified. Therefore, this signal peptide sequence can treat or prevent diseases caused by a lack of normal functioning lipoproteins due to abnormal signal peptide synthesis, such as Alzheimer's disease, brain tumors, exogenous / endogenous lipidemia, family Hypercholesterolemia, Cholesterol lipid storage disease, fatty liver, liver cancer and coronary heart disease.
本发明的多肽或其片断还可以用来治疗或预防各种癌症, 包括但不限于: 呼吸系统肿瘤: 鼻腔及鼻窦肿瘤、 鼻咽癌、 喉癌、 气管肿瘤、 肺癌、 胸膜间皮瘤 消化系统肿瘤: 唾液腺肿瘤、 食管癌、 食管平滑肌肉瘤、 原发性食管小细胞癌、 胃癌、 胃恶性淋巴瘤、 胃类癌、 大肠癌、 结肠癌、 肠道恶性淋巴瘤、 原发性肝癌、 肝母细胞瘤、 原发性胆囊癌、 胰腺癌  The polypeptides or fragments thereof of the present invention can also be used to treat or prevent various cancers, including but not limited to: Respiratory system tumors: nasal and sinus tumors, nasopharyngeal cancer, laryngeal cancer, tracheal tumors, lung cancer, pleural mesothelioma digestive system Tumors: salivary gland tumor, esophageal cancer, esophageal leiomyosarcoma, primary esophageal small cell cancer, gastric cancer, gastric malignant lymphoma, gastric carcinoid, colorectal cancer, colon cancer, intestinal malignant lymphoma, primary liver cancer, liver mother Cell tumor, primary gallbladder cancer, pancreatic cancer
血液、 淋巴系统肿瘤: 急性白血病、 慢性粒性白血病、 慢性淋巴细胞性白血病、 恶性淋巴瘤 (如淋巴网状组织、 恶性淋巴瘤、 何杰金淋巴瘤、 非何杰金淋巴瘤等)、 恶性组织细胞病 神经系统肿瘤: 星形细胞瘤、 室管膜瘤、 髓母细胞瘤、 脑膜瘤、 胶质细胞瘤、 听神经瘤、 血管源性肿瘤、 脑垂体腺瘤、 颅咽管瘤 Blood, lymphatic tumors: acute leukemia, chronic myelogenous leukemia, chronic lymphocytic leukemia, malignant lymphoma (such as lymphatic reticulum, malignant lymphoma, Hodgkin's lymphoma, non-Hodgkin's lymphoma, etc.), malignant Histiocytosis Neurological tumors: astrocytoma, ependymal tumor, medulloblastoma, meningiomas, glioblastoma, acoustic neuroma, angiogenic tumor, pituitary adenoma, craniopharyngioma
运动系统肿瘤: 骨样骨瘤、 骨软骨瘤、 软骨瘤、 骨母细胞瘤、 软骨母细胞瘤等), 恶性骨肿瘤如骨巨细胞瘤、 骨肉瘤、 软骨肉瘤、 尤文氏肉瘤、 骨髓瘤  Motor system tumors: osteoid osteoma, osteochondroma, chondroma, osteoblastoma, chondroblastoma, etc.), malignant bone tumors such as giant cell tumor of bone, osteosarcoma, chondrosarcoma, Ewing's sarcoma, myeloma
泌尿生殖系统肿瘤: 良性肿瘤如肾皮质小管腺瘤、 嗜酸性细胞腺瘤、 肾小球旁 细胞瘤、 多囊性肾瘤、 精原细胞瘤、 畸胎瘤、 睾丸间质细胞瘤、 子宫内膜间质肿 瘤、 葡萄胎、 卵巢肿瘤、 乳腺纤维瘤, 恶性肿瘤如肾细胞癌、 肾肉瘤样癌、 乳头 样肾细胞癌、 肾母细胞瘤、 前列腺癌、 睾丸肿瘤绒毛膜癌、 子宫颈癌、 子宫内膜 癌、 子宫绒毛膜癌、 输软管癌、 卵巢恶性肿瘤、 乳腺癌  Tumors of the genitourinary system: benign tumors such as renal tubular adenoma, eosinophilic adenoma, juxtaglomerular cell tumor, polycystic kidney tumor, seminoma, teratoma, testicular stromal cell tumor, intrauterine Membrane stromal tumor, hydatidiform mole, ovarian tumor, breast fibroma, malignant tumors such as renal cell carcinoma, renal sarcomatoid carcinoma, papillary renal cell carcinoma, nephroblastoma, prostate cancer, testicular tumor chorionic carcinoma, cervical cancer , Endometrial cancer, endometrial cancer, infusion tube cancer, ovarian cancer, breast cancer
内分泌系统肿瘤: 垂体腺瘤、 甲状腺良性肿瘤、 甲状腺癌、 甲状旁腺腺瘤、 甲 状旁腺癌、 肾上腺髓脂肪瘤、 嗜铬细胞瘤、 胰岛细胞肿瘤、 多发性内分泌腺肿瘤、 胸腺肿瘤  Endocrine system tumors: pituitary adenoma, benign thyroid tumor, thyroid cancer, parathyroid adenoma, parathyroid cancer, adrenal myeloma, pheochromocytoma, islet cell tumor, multiple endocrine gland tumor, thymic tumor
软组织肿瘤: 纤维瘤、 纤维肉瘤、 纤维瘤病、 脂肪瘤、 脂肪肉瘤、 平滑肌瘤、 平滑肌肉瘤、 横紋肌瘤、 横紋肌肉瘤、 滑膜组织瘤、 血管瘤、 肌内血管瘤、 血管 球瘤、 血管内皮肉瘤、 淋巴管瘤、 淋巴管肌瘤、 淋巴管内皮肉瘤、 组织细胞瘤、 恶性纤维组织细胞瘤、 软组织腺泡状肉瘤、 透明细胞肉瘤、 粘液瘤、 骨外尤文氏 肉瘤、 软组织成骨肉瘤、 软组织软骨肉瘤、 间叶瘤、 上皮样肉瘤、 神经鞘瘤、 神 经纤维瘤、 恶性神经鞘瘤、 神经纤维瘤病  Soft tissue tumors: fibroma, fibrosarcoma, fibromatosis, lipoma, liposarcoma, leiomyoma, leiomyosarcoma, rhabdomyosarcoma, rhabdomyosarcoma, synovial tissue tumor, hemangioma, intramuscular hemangioma, blood vessels Globuloma, hemangioendothelial sarcoma, lymphangioma, lymphangiomyoma, lymphatic endothelial sarcoma, histiocytoma, malignant fibrous histiocytoma, soft tissue acinar sarcoma, clear cell sarcoma, myxoma, extraosteal Ewing sarcoma, Soft tissue osteosarcoma, soft tissue chondrosarcoma, mesothelioma, epithelioid sarcoma, schwannomas, neurofibromas, malignant schwannomas, neurofibromatosis
皮肤恶性肿瘤: 皮肤麦克细胞瘤、 Kapos i 肉瘤、 黑色素瘤  Skin malignancies: dermal Mike cell tumor, Kaposi sarcoma, melanoma
本发明也提供了筛选化合物以鉴定提高(激动剂)或阻遏(拮抗剂)人脂蛋白前 体蛋白信号肽 14 的药剂的方法。 激动剂提高人脂蛋白前体蛋白信号肽 14 刺激细 胞增殖等生物功能, 而拮抗剂阻止和治疗与细胞过度增殖有关的紊乱如各种癌症。 例如, 能在药物的存在下, 将哺乳动物细胞或表达人脂蛋白前体蛋白信号肽 14 的膜制剂与标记的人脂蛋白前体蛋白信号肽 14 一起培养。 然后测定药物提高或 阻遏此相互作用的能力。  The invention also provides methods for screening compounds to identify agents that increase (agonist) or suppress (antagonist) the human lipoprotein precursor protein signal peptide 14. Agonists enhance human lipoprotein precursor protein signal peptide 14 to stimulate biological functions such as cell proliferation, while antagonists prevent and treat disorders related to excessive cell proliferation, such as various cancers. For example, mammalian cells or membrane preparations expressing human lipoprotein precursor protein signal peptide 14 can be cultured with labeled human lipoprotein precursor protein signal peptide 14 in the presence of a drug. The ability of the drug to increase or block this interaction is then determined.
人脂蛋白前体蛋白信号肽 14的拮抗剂包括筛选出的抗体、 化合物、 受体缺 失物和类似物等。 人脂蛋白前体蛋白信号肽 14 的拮抗剂可以与人脂蛋白前体蛋 白信号肽 14结合并消除其功能, 或是抑制该多肽的产生, 或是与该多肽的活性 位点结合使该多肽不能发挥生物学功能。  Antagonists of human lipoprotein precursor protein signal peptide 14 include antibodies, compounds, receptor deletions, and the like that have been screened. The antagonist of human lipoprotein precursor protein signal peptide 14 can bind to human lipoprotein precursor protein signal peptide 14 and eliminate its function, or inhibit the production of the polypeptide, or bind to the active site of the polypeptide to make the polypeptide Cannot perform biological functions.
在筛选作为拮抗剂的化合物时, 可以将人脂蛋白前体蛋白信号肽 14加入生 物分析测定中, 通过测定化合物对人脂蛋白前体蛋白信号肽 14 和其受体之间相 互作用的影响来确定化合物是否是拮抗剂。 用上述筛选化合物的同样方法, 可 以筛选出起拮抗剂作用的受体缺失物和类似物。 能与人脂蛋白前体蛋白信号肽 1 4 结合的多肽分子可通过筛选由各种可能组合的氨基酸结合于固相物组成的随 机多肽库而获得。 筛选时, 一般应对人脂蛋白前体蛋白信号肽 14分子进行标记。  When screening compounds as antagonists, human lipoprotein precursor protein signal peptide 14 can be added to the bioanalytical assay by determining the effect of the compound on the interaction between human lipoprotein precursor protein signal peptide 14 and its receptor. Determine if the compound is an antagonist. Receptor deletions and analogs that act as antagonists can be screened in the same manner as described above for screening compounds. Polypeptide molecules capable of binding to human lipoprotein precursor protein signal peptide 1 4 can be obtained by screening a random peptide library composed of various possible combinations of amino acids bound to a solid phase. When screening, the human lipoprotein precursor protein signal peptide 14 molecule should generally be labeled.
本发明提供了用多肽, 及其片段、 衍生物、 类似物或它们的细胞作为抗原 以生产抗体的方法。 这些抗体可以是多克隆抗体或单克隆抗体。 本发明还提供 了针对人脂蛋白前体蛋白信号肽 14 抗原决定簇的抗体。 这些抗体包括(但不限 于): 多克隆抗体、 单克隆抗体、 嵌合抗体、 单链抗体、 Fab 片段和 Fab表达文 库产生的片段。 The present invention provides polypeptides, and fragments, derivatives, analogs or cells thereof as antigens. To produce antibodies. These antibodies can be polyclonal or monoclonal antibodies. The invention also provides antibodies against the human lipoprotein precursor protein signal peptide 14 epitope. These antibodies include (but are not limited to): polyclonal antibodies, monoclonal antibodies, chimeric antibodies, single chain antibodies, Fab fragments, and fragments produced by Fab expression libraries.
多克隆抗体的生产可用人脂蛋白前体蛋白信号肽 14直接注射免疫动物 (如 家兔, 小鼠, 大鼠等) 的方法得到, 多种佐剂可用于增强免疫反应, 包括但不 限于弗氏佐剂等。 制备人脂蛋白前体蛋白信号肽 14 的单克隆抗体的技术包括但 不限于杂交瘤技术(Koh l er and M i l s t e in. Na ture, 1975, 256: 495-497) , 三瘤 技术, 人 Β-细胞杂交瘤技术, EBV-杂交瘤技术等。 将人恒定区和非人源的可变 区 结 合 的 嵌 合 抗 体 可 用 已 有 的 技 术 生 产 (Mor r i son e t a l , PNAS, 1985 , 81: 6851) 0 而已有的生产单链抗体的技术(U. S. Pa t No. 4946778) 也可用于生产抗人脂蛋白前体蛋白信号肽 14的单链抗体。 Polyclonal antibodies can be produced by injecting human lipoprotein precursor protein signal peptide 14 directly into immunized animals (such as rabbits, mice, rats, etc.). A variety of adjuvants can be used to enhance the immune response, including but not limited to 'S adjuvant and so on. Techniques for preparing monoclonal antibodies to human lipoprotein precursor protein signal peptide 14 include, but are not limited to, hybridoma technology (Kohler and Milste in. Nature, 1975, 256: 495-497), triple tumor technology, human beta -Cell hybridoma technology, EBV-hybridoma technology, etc. Chimeric antibodies that bind human constant regions and non-human variable regions can be produced using existing techniques (Morri et al, PNAS, 1985, 81: 6851). 0 Existing techniques for producing single-chain antibodies (US Pa t No. 4946778) can also be used to produce single chain antibodies against human lipoprotein precursor protein signal peptide 14.
抗人脂蛋白前体蛋白信号肽 14的抗体可用于免疫组织化学技术中, 检测活 检标本中的人脂蛋白前体蛋白信号肽 14。  Antibodies against human lipoprotein precursor protein signal peptide 14 can be used in immunohistochemical techniques to detect human lipoprotein precursor protein signal peptide 14 in biopsy specimens.
与人脂蛋白前体蛋白信号肽 14 结合的单克隆抗体也可用放射性同位素标 记, 注入体内可跟踪其位置和分布。 这种放射性标记的抗体可作为一种非创伤 性诊断方法用于肿瘤细胞的定位和判断是否有转移。  Monoclonal antibodies that bind to human lipoprotein precursor protein signal peptide 14 can also be labeled with radioisotopes and injected into the body to track their location and distribution. This radiolabeled antibody can be used as a non-invasive diagnostic method to locate tumor cells and determine whether there is metastasis.
抗体还可用于设计针对体内某一特殊部位的免疫毒素。 如人脂蛋白前体蛋 白信号肽 14 高亲和性的单克隆抗体可与细菌或植物毒素(如白喉毒素, 蓖麻蛋 白, 红豆碱等)共价结合。 一种通常的方法是用巯基交联剂如 SPDP , 攻击抗体 的氨基, 通过二硫键的交换, 将毒素结合于抗体上, 这种杂交抗体可用于杀灭 人脂蛋白前体蛋白信号肽 14阳性的细胞。  Antibodies can also be used to design immunotoxins that target a particular part of the body. For example, human lipoprotein precursor protein signal peptide 14 High-affinity monoclonal antibodies can covalently bind to bacterial or plant toxins (such as diphtheria toxin, ricin, ormosine, etc.). A common method is to attack the amino group of an antibody with a thiol cross-linking agent such as SPDP and bind the toxin to the antibody through the exchange of disulfide bonds. This hybrid antibody can be used to kill the human lipoprotein precursor protein signal peptide 14 Positive cells.
本发明中的抗体可用于治疗或预防与人脂蛋白前体蛋白信号肽 14相关的疾 病。 给予适当剂量的抗体可以刺激或阻断人脂蛋白前体蛋白信号肽 14 的产生或 活性。  The antibodies of the present invention can be used to treat or prevent diseases related to the human lipoprotein precursor protein signal peptide 14. Administration of an appropriate dose of antibody can stimulate or block the production or activity of human lipoprotein precursor protein signal peptide 14.
本发明还涉及定量和定位检测人脂蛋白前体蛋白信号肽 14水平的诊断试验 方法。 这些试验是本领域所熟知的, 且包括 FI SH测定和放射免疫测定 试验中 所检测的人脂蛋白前体蛋白信号肽 14水平, 可以用作解释人脂蛋白前体蛋白信 号肽 14 在各种疾病中的重要性和用于诊断人脂蛋白前体蛋白信号肽 14 起作用 的疾病。  The invention also relates to a diagnostic test method for quantitative and localized detection of human lipoprotein precursor protein signal peptide 14 levels. These tests are well known in the art and include human lipoprotein precursor protein signal peptide 14 levels detected in FI SH assays and radioimmunoassay assays, and can be used to explain human lipoprotein precursor protein signal peptide 14 levels in various Importance in disease and in the diagnosis of diseases where human lipoprotein precursor protein signal peptide 14 plays a role.
本发明的多肽还可用作肽谱分析, 例如, 多肽可用物理的、 化学或酶进行 特异性切割, 并进行一维或二维或三维的凝胶电泳分析,更好的是进行质谱分 析。 The polypeptide of the present invention can also be used for peptide mapping analysis. For example, the polypeptide can be specifically cleaved by physical, chemical or enzymatic analysis, and subjected to one-dimensional or two-dimensional or three-dimensional gel electrophoresis analysis, and more preferably mass spectrometry analysis. Analysis.
编码人脂蛋白前体蛋白信号肽 14的多核苷酸也可用于多种治疗目的。 基因 治疗技术可用于治疗由于人脂蛋白前体蛋白信号肽 14 的无表达或异常 /无活性 表达所致的细胞增殖、 发育或代谢异常。 重组的基因治疗载体(如病毒载体)可 设计用于表达变异的人脂蛋白前体蛋白信号肽 14, 以抑制内源性的人脂蛋白前 体蛋白信号肽 14 活性。 例如, 一种变异的人脂蛋白前体蛋白信号肽 14 可以是 缩短的、 缺失了信号传导功能域的人脂蛋白前体蛋白信号肽 14, 虽可与下游的 底物结合, 但缺乏信号传导活性。 因此重组的基因治疗载体可用于治疗人脂蛋 白前体蛋白信号肽 14表达或活性异常所致的疾病。 来源于病毒的表达载体如逆 转录病毒、 腺病毒、 腺病毒相关病毒、 单纯疱疹病毒、 细小病毒等可用于将编 码人脂蛋白前体蛋白信号肽 14 的多核苷酸转移至细胞内。 构建携带编码人脂蛋 白前体蛋白信号肽 14 的多核苷酸的重组病毒载体的方法可见于已有文献 (Sambrook, e t a l. )。 另外重组编码人脂蛋白前体蛋白信号肽 14 的多核苷酸可 包装到脂质体中转移至细胞内。  The polynucleotide encoding human lipoprotein precursor protein signal peptide 14 can also be used for a variety of therapeutic purposes. Gene therapy technology can be used to treat abnormal cell proliferation, development, or metabolism caused by the non-expression or abnormal / inactive expression of human lipoprotein precursor protein signal peptide 14. Recombinant gene therapy vectors (such as viral vectors) can be designed to express mutated human lipoprotein precursor protein signal peptide 14 to inhibit endogenous human lipoprotein precursor protein signal peptide 14 activity. For example, a variant human lipoprotein precursor protein signal peptide 14 may be a shortened human lipoprotein precursor protein signal peptide 14 that lacks a signaling functional domain. Although it can bind to downstream substrates, it lacks signal transduction. active. Therefore, the recombinant gene therapy vector can be used for treating diseases caused by abnormal expression or activity of human lipoprotein precursor protein signal peptide 14. Virus-derived expression vectors such as retrovirus, adenovirus, adenovirus-associated virus, herpes simplex virus, parvovirus, etc. can be used to transfer a polynucleotide encoding a human lipoprotein precursor protein signal peptide 14 into a cell. A method for constructing a recombinant viral vector carrying a polynucleotide encoding a human lipoprotein precursor protein signal peptide 14 can be found in the existing literature (Sambrook, et al.). In addition, a recombinant polynucleotide encoding the human lipoprotein precursor protein signal peptide 14 can be packaged into liposomes and transferred into cells.
多核苷酸导入组织或细胞内的方法包括: 将多核苷酸直接注入到体内组织 中; 或在体外通过载体(如病毒、 噬菌体或质粒等)先将多核苷酸导入细胞中, 再将细胞移植到体内等。  Methods for introducing a polynucleotide into a tissue or cell include: directly injecting the polynucleotide into a tissue in vivo; or introducing the polynucleotide into a cell in vitro through a vector (such as a virus, phage, or plasmid), and then transplanting the cell Into the body and so on.
抑制人脂蛋白前体蛋白信号肽 14 mRNA 的寡核苷酸(包括反义 RNA 和 DNA ) 以及核酶也在本发明的范围之内。 核酶是一种能特异性分解特定 RNA的酶样 RNA 分子, 其作用机制是核酶分子与互补的靶 RNA特异性杂交后进行核酸内切作用 反义的 RNA和 DNA及核酶可用已有的任何 RNA或 DM合成技术获得, 如固相磷 酸酰胺化学合成法合成寡核苷酸的技术已广泛应用。 反义 RNA 分子可通过编码 该 RNA 的 DNA序列在体外或体内转录获得。 这种 DM序列已整合到载体的 RNA 聚合酶启动子的下游。 为了增加核酸分子的稳定性, 可用多种方法对其进行修 饰, 如增加两侧的序列长度, 核糖核苷之间的连接应用磷酸硫酯键或肽键而非 磷酸二酯键。  Oligonucleotides (including antisense RNA and DNA) and ribozymes that inhibit human lipoprotein precursor protein signal peptide 14 mRNA are also within the scope of the present invention. A ribozyme is an enzyme-like RNA molecule that specifically decomposes specific RNA. Its mechanism of action is that the ribozyme molecule specifically hybridizes with a complementary target RNA and performs endonucleation. Antisense RNA and DNA and ribozymes are available Any RNA or DM synthesis technology, such as solid-phase phosphate amide chemical synthesis, has been widely used. Antisense RNA molecules can be obtained by in vitro or in vivo transcription of a DNA sequence encoding the RNA. This DM sequence has been integrated downstream of the RNA polymerase promoter of the vector. In order to increase the stability of the nucleic acid molecule, it can be modified in a variety of ways, such as increasing the sequence length on both sides, and the linkage between ribonucleosides using phosphate thioester or peptide bonds instead of phosphodiester bonds.
编码人脂蛋白前体蛋白信号肽 14的多核苷酸可用于与人脂蛋白前体蛋白信 号肽 14 的相关疾病的诊断。 编码人脂蛋白前体蛋白信号肽 14 的多核苷酸可用 于检测人脂蛋白前体蛋白信号肽 14 的表达与否或在疾病状态下人脂蛋白前体蛋 白信号肽 14 的异常表达。 如编码人脂蛋白前体蛋白信号肽 14 的 DNA序列可用 于对活检标本进行杂交以判断人脂蛋白前体蛋白信号肽 14 的表达状况。 杂交技 术包括 Sou thern 印迹法, Nor the rn 印迹法、 原位杂交等。 这些技术方法都是 公开的成熟技术, 相关的试剂盒都可从商业途径得到。 本发明的多核苷酸的一 部分或全部可作为探针固定在微阵列(Microarray)或 DNA芯片(又称为 "基因芯 片" )上, 用于分析组织中基因的差异表达分析和基因诊断。 用人脂蛋白前体蛋 白信号肽 14 特异的引物进行 RNA-聚合酶链反应(RT-PCR)体外扩增也可检测人 脂蛋白前体蛋白信号肽 14的转录产物。 The polynucleotide encoding human lipoprotein precursor protein signal peptide 14 can be used for the diagnosis of diseases related to human lipoprotein precursor protein signal peptide 14. The polynucleotide encoding human lipoprotein precursor protein signal peptide 14 can be used to detect the expression of human lipoprotein precursor protein signal peptide 14 or the abnormal expression of human lipoprotein precursor protein signal peptide 14 in a disease state. For example, the DNA sequence encoding human lipoprotein precursor protein signal peptide 14 can be used to hybridize biopsy specimens to determine the expression status of human lipoprotein precursor protein signal peptide 14. Hybridization techniques include Sou thern blotting, Nor thern blotting, and in situ hybridization. These technical methods are Publicly available technologies and related kits are commercially available. Some or all of the polynucleotides of the present invention can be used as probes to be fixed on a microarray or a DNA chip (also referred to as a "gene chip") for analyzing differential expression analysis and gene diagnosis of genes in tissues. Human lipoprotein precursor protein signal peptide 14 specific primers for RNA-polymerase chain reaction (RT-PCR) in vitro amplification can also detect human lipoprotein precursor protein signal peptide 14 transcription products.
检测人脂蛋白前体蛋白信号肽 14基因的突变也可用于诊断人脂蛋白前体蛋 白信号肽 14 相关的疾病。 人脂蛋白前体蛋白信号肽 14 突变的形式包括与正常 野生型人脂蛋白前体蛋白信号肽 14 DM序列相比的点突变、 易位、 缺失、 重组 和其它任何异常等。 可用已有的技术如 Southern 印迹法、 DNA 序列分析、 PCR 和原位杂交检测突变。 另外, 突变有可能影响蛋白的表达, 因此用 Northern 印 迹法、 Western印迹法可间接判断基因有无突变。  Detection of mutations in the human lipoprotein precursor protein signal peptide 14 gene can also be used to diagnose human lipoprotein precursor protein signal peptide 14-related diseases. Human lipoprotein precursor protein signal peptide 14 mutations include point mutations, translocations, deletions, recombinations, and any other abnormalities compared to the normal wild-type human lipoprotein precursor protein signal peptide 14 DM sequence. Mutations can be detected using existing techniques such as Southern blotting, DNA sequence analysis, PCR and in situ hybridization. In addition, mutations may affect protein expression. Therefore, Northern blotting and Western blotting can be used to indirectly determine whether a gene is mutated.
本发明的序列对染色体鉴定也是有价值的。 该序列会特异性地针对某条人 染色体具体位置且并可以与其杂交。 目前, 需要鉴定染色体上的各基因的具体 位点。 现在, 只有很少的基于实际序列数据(重复多态性)的染色体标记物可用 于标记染色体位置。 根据本发明, 为了将这些序列与疾病相关基因相关联, 其 重要的第一步就是将这些 DNA序列定位于染色体上。  The sequences of the invention are also valuable for chromosome identification. The sequence specifically targets a specific position on a human chromosome and can hybridize to it. Currently, specific sites for each gene on the chromosome need to be identified. Currently, only a few chromosome markers based on actual sequence data (repeating polymorphisms) are available for marking chromosome positions. According to the present invention, in order to associate these sequences with disease-related genes, an important first step is to locate these DNA sequences on a chromosome.
简而言之, 根据 cDNA制备 PCR引物(优选 15-35bP), 可以将序列定位于染色 体上。 然后, 将这些引物用于 PCR筛选含各条人染色体的体细胞杂合细胞。 只 有那些含有相应于引物的人基因的杂合细胞会产生扩增的片段。 In short, a PCR primer (preferably 15-35b P ) is prepared from the cDNA, and the sequence can be mapped on the chromosome. These primers were then used for PCR screening of somatic hybrid cells containing individual human chromosomes. Only those hybrid cells that contain the human gene corresponding to the primer will produce amplified fragments.
体细胞杂合细胞的 PCR定位法, 是将 DM定位到具体染色体的快捷方法。 使 用本发明的寡核苷酸引物, 通过类似方法, 可利用一组来自特定染色体的片段 或大量基因组克隆而实现亚定位。 可用于染色体定位的其它类似策略包括原位 杂交、 用标记的流式分选的染色体预筛选和杂交预选, 从而构建染色体特异的 cDNA库。  PCR localization of somatic hybrid cells is a quick way to localize DM to specific chromosomes. Using the oligonucleotide primers of the present invention, in a similar manner, a set of fragments from a specific chromosome or a large number of genomic clones can be used to achieve sublocalization. Other similar strategies that can be used for chromosomal localization include in situ hybridization, chromosome pre-screening with labeled flow sorting, and pre-selection of hybridization to construct chromosome-specific cDNA libraries.
将 cDNA克隆与中期染色体进行荧光原位杂交(FISH), 可以在一个步骤中精 确地进行染色体定位。 此技术的综述, 参见 Verma等, Human Chromosomes: a Manual of Basic Techniques, Pergamon Press, New York (1988)。  Fluorescent in situ hybridization (FISH) of cDNA clones with metaphase chromosomes allows precise chromosomal localization in one step. For a review of this technique, see Verma et al., Human Chromosomes: a Manual of Basic Techniques, Pergamon Press, New York (1988).
一旦序列被定位到准确的染色体位置, 此序列在染色体上的物理位置就可 以与基因图数据相关联。 这些数据可见于例如, V.Mckusick, Mendel ian Inheritance in Man (可通过与 Johns Hopkins University Welch Medical Library联机获得)。 然后可通过连锁分析, 确定基因与业已定位到染色体区域 上的疾病之间的关系。 接着, 需要测定患病和未患病个体间的 cDNA或基因组序列差异。 如果在一 些或所有的患病个体中观察到某突变, 而该突变在任何正常个体中未观察到, 则该突变可能是疾病的病因。 比较患病和来患病个体, 通常涉及首先寻找染色 体中结构的变化, 如从染色体水平可见的或用基于 cDNA序列的 PCR可检测的缺 失或易位。 根据目前的物理作图和基因定位技术的分辨能力, 被精确定位至与 疾病有关的染色体区域的 cDNA , 可以是 5 0至 5 00个潜在致病基因间之一种(假定 1兆碱基作图分辨能力和每 2 0kb对应于一个基因)。 Once the sequence is located at the exact chromosomal location, the physical location of the sequence on the chromosome can be correlated with the genetic map data. These data can be found in, for example, V. Mckusick, Mendel ian Inheritance in Man (available online with Johns Hopkins University Welch Medical Library). Linkage analysis can then be used to determine the relationship between genes and diseases that have been mapped to chromosomal regions. Next, the differences in cDNA or genomic sequences between the affected and unaffected individuals need to be determined. If a mutation is observed in some or all diseased individuals and the mutation is not observed in any normal individuals, the mutation may be the cause of the disease. Comparing diseased and oncoming individuals usually involves first looking for structural changes in the chromosome, such as deletions or translocations that are visible at the chromosomal level or detectable with cDNA sequence-based PCR. According to the resolution capabilities of current physical mapping and gene mapping technology, the cDNA accurately mapped to the chromosomal region associated with the disease can be one of 50 to 500 potentially pathogenic genes (assuming 1 megabase Figure resolution and each 20kb corresponds to a gene).
可以将本发明的多肽、 多核苷酸及其模拟物、 激动剂、 拮抗剂和抑制剂与 合适的药物载体组合后使用。 这些载体可以是水、 葡萄糖、 乙醇、 盐类、 缓冲 液、 甘油以及它们的组合。 组合物包含安全有效量的多肽或拮抗剂以及不影响 药物效果的载体和赋形剂。 这些组合物可以作为药物用于疾病治疗。  The polypeptides, polynucleotides and mimetics, agonists, antagonists and inhibitors of the present invention can be used in combination with a suitable pharmaceutical carrier. These carriers can be water, glucose, ethanol, salts, buffers, glycerol, and combinations thereof. The composition comprises a safe and effective amount of the polypeptide or antagonist, and carriers and excipients which do not affect the effect of the drug. These compositions can be used as drugs for the treatment of diseases.
本发明还提供含有一种或多种容器的药盒或试剂盒, 容器中装有一种或多 种本发明的药用组合物成分。 与这些容器一起, 可以有由制造、 使用或销售药 品或生物制品的政府管理机构所给出的指示性提示, 该提示反映出生产、 使用 或销售的政府管理机构许可其在人体上施用。 此外, 本发明的多肽可以与其它 的治疗化合物结合使用。  The invention also provides a kit or kit containing one or more containers containing one or more ingredients of the pharmaceutical composition of the invention. Along with these containers, there may be instructional instructions given by government agencies that manufacture, use, or sell pharmaceuticals or biological products, which prompts permission for administration on the human body by government agencies that produce, use, or sell. In addition, the polypeptides of the invention can be used in combination with other therapeutic compounds.
药物组合物可以以方便的方式给药, 如通过局部、 静脉内、 腹膜内、 肌内、 皮下、 鼻内或皮内的给药途径。 人脂蛋白前体蛋白信号肽 14 以有效地治疗和 / 或预防具体的适应症的量来给药。 施用于患者的人脂蛋白前体蛋白信号肽 1 4 的 量和剂量范围将取决于许多因素, 如给药方式、 待治疗者的健康条件和诊断医 生的判断。  The pharmaceutical composition can be administered in a convenient manner, such as by a topical, intravenous, intraperitoneal, intramuscular, subcutaneous, intranasal or intradermal route of administration. Human lipoprotein precursor protein signal peptide 14 is administered in an amount effective to treat and / or prevent a specific indication. The amount and range of human lipoprotein precursor protein signal peptide 1 4 to be administered to a patient will depend on many factors, such as the mode of administration, the health conditions of the person to be treated, and the judgment of the diagnosing physician.

Claims

权利要求书 Claim
1、 一种分离的多肽-人脂蛋白前体蛋白信号肽 14, 其特征在于它包含有: SEQ ID NO: 2所示的氨基酸序列的多肽、 或其多肽的活性片段、 类似物或衍生物。 1. An isolated polypeptide-human lipoprotein precursor protein signal peptide 14, characterized in that it comprises: a polypeptide having the amino acid sequence shown in SEQ ID NO: 2, or an active fragment, analog, or derivative of a polypeptide thereof .
2、 如权利要求 1 所述的多肽, 其特征在于所述多肽、 类似物或衍生物的氨基酸 序列具有与 SEQ ID NO: 2所示的氨基酸序列至少 95%的相同性。  2. The polypeptide according to claim 1, wherein the amino acid sequence of the polypeptide, analog or derivative has at least 95% identity with the amino acid sequence shown in SEQ ID NO: 2.
3、 如权利要求 2所述的多肽, 其特征在于它包含具有 SEQ ID NO: 2所示的氨基酸 序列的多肽。  3. The polypeptide according to claim 2, characterized in that it comprises a polypeptide having the amino acid sequence shown in SEQ ID NO: 2.
4、 一种分离的多核苷酸, 其特征在于所述多核苷酸包含选自下组中的一种: 4. An isolated polynucleotide, characterized in that said polynucleotide comprises one selected from the group consisting of:
(a ) 编码具有 SEQ ID NO: 2 所示氨基酸序列的多肽或其片段、 类似物、 衍生物 的多核苷酸; (a) a polynucleotide encoding a polypeptide having an amino acid sequence shown in SEQ ID NO: 2 or a fragment, analog, or derivative thereof;
(b) 与多核苷酸 (a ) 互补的多核苷酸; 或  (b) a polynucleotide complementary to polynucleotide (a); or
(c) 与 (a ) 或 (b ) 有至少 70%相同性的多核苷酸。  (c) A polynucleotide that is at least 70% identical to (a) or (b).
5、 如权利要求 4所述的多核苷酸,其特征在于所述多核苷酸包含编码具有 SEQ ID NO: 2所示氨基酸序列的多核苷酸。  5. The polynucleotide according to claim 4, wherein the polynucleotide comprises a polynucleotide encoding an amino acid sequence represented by SEQ ID NO: 2.
6、 如权利要求 4所述的多核苷酸,其特征在于所述多核苷酸的序列包含有 SEQ ID NO: 1中 619-1038位的序列或 SEQ ID NO: 1中 1-2572位的序列。  6. The polynucleotide according to claim 4, characterized in that the sequence of the polynucleotide comprises the sequence of positions 619-1038 in SEQ ID NO: 1 or the sequence of positions 1-2572 in SEQ ID NO: 1. .
7、 一种含有外源多核苷酸的重组载体, 其特征在于它是由权利要求 4-6 中的任 一权利要求所述多核苷酸与质粒、 病毒或运载体表达载体构建而成的重组载体。 7. A recombination vector containing an exogenous polynucleotide, characterized in that it is a recombination constructed by the polynucleotide according to any one of claims 4-6 and a plasmid, virus or a carrier expression vector Carrier.
8、 一种含有外源多核苷酸的遗传工程化宿主细胞, 其特征在于它是选自于下列 一种宿主细胞: 8. A genetically engineered host cell containing an exogenous polynucleotide, characterized in that it is selected from one of the following host cells:
(a) 用权利要求 7所述的重组载体转化或转导的宿主细胞; 或  (a) a host cell transformed or transduced with the recombinant vector of claim 7; or
(b) 用权利要求 4-6中的任一权利要求所述多核苷酸转化或转导的宿主细胞。 (b) a host cell transformed or transduced with a polynucleotide according to any one of claims 4-6.
9、 一种具有人脂蛋白前体蛋白信号肽 14 活性的多肽的制备方法, 其特征在于 所述方法包括: 9. A method for preparing a polypeptide having human lipoprotein precursor protein signal peptide 14 activity, characterized in that the method includes:
(a) 在表达人脂蛋白前体蛋白信号肽 14条件下, 培养权利要求 8所述的工程化 宿主细胞;  (a) culturing the engineered host cell according to claim 8 under the condition of expressing human lipoprotein precursor protein signal peptide 14;
(b) 从培养物中分离出具有人脂蛋白前体蛋白信号肽 14活性的多肽。  (b) A polypeptide having human lipoprotein precursor protein signal peptide 14 activity is isolated from the culture.
1 0、 一种能与多肽结合的抗体,其特征在于所述抗体是能与人脂蛋白前体蛋白信 号肽 14特异性结合的抗体。  10. An antibody capable of binding to a polypeptide, characterized in that said antibody is an antibody capable of specifically binding to human lipoprotein precursor protein signal peptide 14.
11、 一类模拟或调节多肽活性或表达的化合物, 其特征在于它们是模拟、 促进、 拮抗或抑制人脂蛋白前体蛋白信号肽 14的活性的化合物。 11. A class of compounds that mimic or regulate the activity or expression of a polypeptide, characterized in that they are compounds that mimic, promote, antagonize or inhibit the activity of human lipoprotein precursor protein signal peptide 14.
12、 如权利要求 11 所述的化合物, 其特征在于它是 SEQ ID NO: 1 所示的多核苷 酸序列或其片段的反义序列。 12. The compound according to claim 11, characterized in that it is an antisense sequence of a polynucleotide sequence or a fragment thereof as shown in SEQ ID NO: 1.
13、 一种权利要求 11 所述化合物的应用, 其特征在于所述化合物用于调节人脂 蛋白前体蛋白信号肽 14在体内、 体外活性的方法。  13. Use of a compound according to claim 11, characterized in that the compound is used for a method for regulating the activity of human lipoprotein precursor protein signal peptide 14 in vivo and in vitro.
14、 一种检测与权利要求 1-3 中的任一权利要求所述多肽相关的疾病或疾病易 感性的方法, 其特征在于其包括检测所述多肽的表达量, 或者检测所述多肽的活 性, 或者检测多核苷酸中引起所述多肽表达量或活性异常的核苷酸变异。  14. A method for detecting a disease or susceptibility to a disease associated with a polypeptide according to any one of claims 1-3, characterized in that it comprises detecting the expression level of the polypeptide, or detecting the activity of the polypeptide Or detecting a nucleotide variation in a polynucleotide that causes abnormal expression or activity of the polypeptide.
15、 如权利要求 1-3 中的任一权利要求所述多肽的应用, 其特征在于它应用于 筛选人脂蛋白前体蛋白信号肽 14 的模拟物、 激动剂, 拮抗剂或抑制剂; 或者用于 肽指紋图谱鉴定。  15. Use of a polypeptide according to any one of claims 1-3, characterized in that it is used for screening mimetics, agonists, antagonists or inhibitors of human lipoprotein precursor protein signal peptide 14; or For identification of peptide fingerprints.
16、 如权利要求 4-6 中的任一权利要求所述的核酸分子的应用, 其特征在于它 作为引物用于核酸扩增反应, 或者作为探针用于杂交反应, 或者用于制造基因芯 片或微阵列。  16. The use of a nucleic acid molecule according to any one of claims 4-6, characterized in that it is used as a primer for a nucleic acid amplification reaction, or as a probe for a hybridization reaction, or for manufacturing a gene chip Or microarray.
17、 如权利要求 1-6及 11 中的任一权利要求所述的多肽、 多核苷酸或化合物的 应用, 其特征在于用所述多肽、 多核苷酸或其模拟物、 激动剂、 拮抗剂或抑制剂 以安全有效剂量与药学上可接受的载体组成作为诊断或治疗与人脂蛋白前体蛋白 信号肽 14异常相关的疾病的药物组合物。  17. Use of a polypeptide, polynucleotide or compound according to any one of claims 1-6 and 11, characterized in that said polypeptide, polynucleotide or mimetic, agonist, antagonist is used Or the inhibitor is composed of a safe and effective dose with a pharmaceutically acceptable carrier as a pharmaceutical composition for diagnosing or treating a disease associated with abnormality of the human lipoprotein precursor protein signal peptide 14.
18、 权利要求 1-6及 11 中的任一权利要求所述的多肽、 多核苷酸或化合物的应 用, 其特征在于用所述多肽、 多核苷酸或化合物制备用于治疗如恶性肿瘤, 血液 病, HIV感染和免疫性疾病和各类炎症的药物。  18. The use of a polypeptide, polynucleotide or compound according to any one of claims 1-6 and 11, characterized in that the polypeptide, polynucleotide or compound is used for preparing for treating malignant tumors, blood, etc. Disease, HIV infection and immune diseases and drugs of various inflammations.
PCT/CN2000/000514 1999-11-30 2000-11-27 A novel polypeptide - human prolipoprotein signal peptide 14 and a polynucleotide encoding the same WO2001040299A1 (en)

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