WO2001038379A1 - A new polypeptide-human ribosomal protein l23 and the polynucleotide encoding it - Google Patents

A new polypeptide-human ribosomal protein l23 and the polynucleotide encoding it Download PDF

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Publication number
WO2001038379A1
WO2001038379A1 PCT/CN2000/000447 CN0000447W WO0138379A1 WO 2001038379 A1 WO2001038379 A1 WO 2001038379A1 CN 0000447 W CN0000447 W CN 0000447W WO 0138379 A1 WO0138379 A1 WO 0138379A1
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polypeptide
polynucleotide
ribosomal protein
human ribosomal
sequence
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PCT/CN2000/000447
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French (fr)
Chinese (zh)
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Yumin Mao
Yi Xie
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Bioroad Gene Development Ltd. Shanghai
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Priority to AU15093/01A priority Critical patent/AU1509301A/en
Publication of WO2001038379A1 publication Critical patent/WO2001038379A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/46Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates
    • C07K14/47Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates from mammals
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P35/00Antineoplastic agents
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P37/00Drugs for immunological or allergic disorders
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K48/00Medicinal preparations containing genetic material which is inserted into cells of the living body to treat genetic diseases; Gene therapy

Definitions

  • the present invention belongs to the field of biotechnology. Specifically, the present invention describes a new polypeptide, human ribosomal protein L23, and a polynucleotide sequence encoding the polypeptide. The invention also relates to a preparation method and application of the polynucleotide and the polypeptide. Background technique
  • Ribosomes are organelles that synthesize proteins. The main components are proteins and ribosomal RNA. Ribosome proteins are very conserved and play an important role in the process of ribosomal translation. For example: they play an important role in folding rRNA into a functional three-dimensional structure; in protein synthesis, a series of changes in the spatial conformation of the ribosome, some Ribosomal proteins may "fine-tune" the conformation of the ribosome; at the binding site of the ribosome, it may even play a catalytic role, and the ribosome protein functions together with rRNA.
  • L22 ribosomal protein is one of the five ribosomal proteins necessary for early folding of 23S rRNA.
  • L22 is distributed on the 50S ribosomal subunit, close to the active site of peptidyl transferase.
  • the L22 protein includes a small c + ⁇ domain and a 30A hairpin structure protruding from the P subunit. Most of the surface of this protein has the potential to interact with rRNA. Similar structures also exist in some other RNA-binding proteins, suggesting that they may have the same origin. Deletion or inappropriate chemical modification of ribosomal proteins, or mutations in ribosomal protein genes, will affect the function of ribosomes and reduce the activity of peptide synthesis, leading to various serious consequences, such as the inability to maintain cell membrane structures and cells.
  • the present invention has 33% homology at the protein level with the L22 protein found in aquatic bacteria, so it is believed that the base of the present invention is because it encodes a gene similar to the L22 protein and has similar biological functions.
  • the present invention is named human ribosomal protein L23.
  • the human ribosomal protein L23 protein plays an important role in regulating important functions of the body such as cell division and embryonic development, and it is believed that a large number of proteins are involved in these regulatory processes, so there has been a need in the art to identify more involved in these processes.
  • Human ribosomal protein L23 protein, especially the amino acid sequence of this protein is identified. Isolation of the new human ribosomal protein L23 protein encoding gene has also been used to determine the role of this protein in health and disease states. Use provides the foundation. This protein may form the basis for developing diagnostic and / or therapeutic drugs for diseases, so isolating its coding DNA is important. Disclosure of invention
  • Another object of the invention is to provide a polynucleotide encoding the polypeptide.
  • Another object of the present invention is to provide a recombinant vector containing a polynucleotide encoding human ribosomal protein L23.
  • Another object of the present invention is to provide a genetically engineered host cell containing a polynucleotide encoding human ribosomal protein L23.
  • Another object of the present invention is to provide a method for producing human ribosomal protein L23.
  • Another object of the present invention is to provide an antibody against the polypeptide-human ribosomal protein L23 of the present invention.
  • Another object of the present invention is to provide mimic compounds, antagonists, agonists, and inhibitors against the human ribosomal protein L23 of the polypeptide of the present invention.
  • Another object of the present invention is to provide a method for diagnosing and treating diseases associated with abnormalities of human ribosomal protein L23.
  • the present invention relates to an isolated polypeptide, which is of human origin, and includes: a polypeptide having the amino acid sequence of SEQ ID D. 2 or a conservative variant, biologically active fragment or derivative thereof.
  • the polypeptide is a polypeptide having the amino acid sequence of SEQ ID NO: 2.
  • the invention also relates to an isolated polynucleotide comprising a nucleotide sequence or a variant thereof selected from the group consisting of:
  • sequence of the polynucleotide is one selected from the group consisting of: (a) a sequence having positions 20 to 640 in SEQ ID NO: 1; and (b) a sequence having 1- in SEQ ID NO: 1 707-bit sequence.
  • the invention further relates to a vector, in particular an expression vector, containing the polynucleotide of the invention; a host cell genetically engineered with the vector, including a transformed, transduced or transfected host cell; and a method comprising culturing said Host cell and method of preparing the polypeptide of the present invention by recovering the expression product.
  • a vector in particular an expression vector, containing the polynucleotide of the invention
  • a host cell genetically engineered with the vector including a transformed, transduced or transfected host cell
  • a method comprising culturing said Host cell and method of preparing the polypeptide of the present invention by recovering the expression product.
  • the invention also relates to an antibody capable of specifically binding to a polypeptide of the invention.
  • the invention also relates to a method for screening compounds that mimic, activate, antagonize or inhibit the activity of human ribosomal protein L23 protein, which comprises utilizing the polypeptide of the invention.
  • the invention also relates to compounds obtained by this method.
  • the invention also relates to a method for detecting a disease or susceptibility to disease associated with abnormal expression of human ribosomal protein L2 3 protein in vitro, which comprises detecting a mutation in the polypeptide or a polynucleotide sequence encoding the same in a biological sample, or detecting a biological The amount or biological activity of a polypeptide of the invention in a sample.
  • the present invention also relates to a pharmaceutical composition, which comprises a polypeptide of the present invention or a mimetic thereof, an activator, an antagonist or an inhibitor, and a pharmaceutically acceptable carrier.
  • the present invention also relates to the use of the polypeptides and / or polynucleotides of the present invention in the preparation of a medicament for treating cancer, developmental or immune diseases, or other diseases caused by abnormal expression of human ribosomal protein L23.
  • Nucleic acid sequence refers to oligonucleotides, nucleotides or polynucleotides and fragments or parts thereof, and can also refer to genomic or synthetic DNA or RNA, which can be single-stranded or double-stranded, representing the sense strand or Antisense strand.
  • amino acid sequence refers to an oligopeptide, peptide, polypeptide or protein sequence and fragments or portions thereof.
  • a protein or polynucleotide “variant” refers to an amino acid sequence having one or more amino acids or nucleotide changes or a polynucleotide sequence encoding it. The changes may include deletions, insertions or substitutions of amino acids or nucleotides in the amino acid sequence or nucleotide sequence. Variants can have "conservative" changes, in which the substituted amino acid has a structural or chemical property similar to that of the original amino acid, such as replacing isoleucine with leucine. Variants can also have non-conservative changes, such as replacing glycine with tryptophan.
  • “Deletion” refers to the deletion of one or more amino acids or nucleotides in an amino acid sequence or nucleotide sequence.
  • “Insertion” or “addition” refers to an alteration in the amino acid sequence or nucleotide sequence that results in an increase in one or more amino acids or nucleotides compared to a naturally occurring molecule.
  • “Replacement” refers to the replacement of one or more amino acids or nucleotides with different amino acids or nucleotides.
  • Bioactivity refers to a protein that has the structure, regulation, or biochemical function of a natural molecule.
  • immunologically active refers to the ability of natural, recombinant, or synthetic proteins and fragments thereof to induce a specific immune response and to bind specific antibodies in a suitable animal or cell.
  • An "agonist” refers to a molecule that, when combined with human ribosomal protein L23, can cause the protein to change, thereby regulating the activity of the protein.
  • Agonists can include proteins, nucleic acids, carbohydrates, or any other binding human Molecule of ribosomal protein L23.
  • Antagonist refers to a molecule that, when combined with human ribosomal protein L23, can block or regulate the biological or immunological activity of human ribosomal protein L23.
  • Antagonists and inhibitors may include proteins, nucleic acids, carbohydrates or any other molecule that can bind to human ribosomal protein L23.
  • Regular refers to a change in the function of human ribosomal protein L23, including an increase or decrease in protein activity, a change in binding properties, and any other biological, functional, or immune properties of human ribosomal protein L23.
  • substantially pure means substantially free of other proteins, lipids, sugars or other substances with which it is naturally associated.
  • Those skilled in the art can purify human ribosomal protein L23 using standard protein purification techniques.
  • the substantially pure human ribosomal protein L23 produces a single main band on a non-reducing polyacrylamide gel.
  • the purity of human ribosomal protein L23 peptide can be analyzed by amino acid sequence.
  • Complementary refers to a polynucleotide that naturally binds by base-pairing under conditions of acceptable salt concentration and temperature.
  • sequence "C-T-G-A” can be combined with the complementary sequence "G-A-C-T”.
  • the complementarity between two single-stranded molecules can be partial or complete.
  • the degree of complementarity between nucleic acid strands has a significant effect on the efficiency and strength of hybridization between nucleic acid strands.
  • “Homology” refers to the degree of complementarity and can be partially homologous or completely homologous.
  • Partial homology refers to a partially complementary sequence that at least partially inhibits hybridization of a fully complementary sequence to a target nucleic acid. This inhibition of hybridization can be detected by performing hybridization (Sou thern blot or Nor thern blot, etc.) under conditions of reduced stringency.
  • Substantially homologous sequences or hybridization probes can compete and inhibit the binding of completely homologous sequences to the target sequence under conditions of reduced stringency. This does not mean that the conditions of reduced stringency allow non-specific binding, because the conditions of reduced stringency require that two sequences bind to each other as a specific or selective interaction.
  • Percent identity refers to the percentage of sequences that are identical or similar in the comparison of two or more amino acid or nucleic acid sequences. The percent identity can be determined electronically, such as by the MEGAL IGN program (Lasergene sof tware package, DNASTAR, Inc., Madi son Wis.). The MEGALIGN program can compare two or more sequences according to different methods such as Cluster method (Higgins, D. G. and P. M. Sharp (1988) Gene 73: 237-244). The Clus ter method arranges groups of sequences into clusters by checking the distance between all pairs. The clusters are then allocated in pairs or groups. The percent identity between two amino acid sequences such as sequence A and sequence B is calculated by the following formula:
  • Phases between nucleic acid sequences can also be determined by the Clus ter method or by methods known in the art such as Jo tun He in. Percent homosexuality (He in J., (1990) Methods in emzumol ogy 183: 625-645).
  • Similarity refers to the degree to which the amino acid residues at the corresponding positions are replaced by the same or conservative substitutions in the alignment between amino acid sequences.
  • Amino acids used for conservative substitutions for example, negatively charged amino acids may include aspartic acid and glutamic acid; positively charged amino acids may include lysine and arginine; having an uncharged head group is Similar hydrophilic amino acids may include leucine, isoleucine and valine; glycine and alanine; asparagine and glutamine; serine and threonine; phenylalanine and tyrosine.
  • Antisense refers to a nucleotide sequence that is complementary to a particular DNA or RNA sequence.
  • Antisense strand refers to a nucleic acid strand that is complementary to the “sense strand”.
  • Derivative refers to a chemical modification of HFP or a nucleic acid encoding it. This chemical modification may be the replacement of a hydrogen atom with an alkyl, acyl or amino group. Nucleic acid derivatives can encode polypeptides that retain the main biological properties of natural molecules.
  • Antibody refers to a complete antibody molecule and its fragments, such as Fa, (& 1) ') 2 and 1 ⁇ , which can specifically bind to the epitope of human ribosomal protein L2 3.
  • a “humanized antibody” refers to an antibody in which the amino acid sequence of a non-antigen binding region is replaced to become more similar to a human antibody, but still retains the original binding activity.
  • isolated refers to the removal of a substance from its original environment (for example, its natural environment if it occurs naturally).
  • a naturally occurring polynucleotide or polypeptide is not isolated when it is present in a living thing, but the same polynucleotide or polypeptide is separated from some or all of the substances that coexist with it in the natural system.
  • Such a polynucleotide may be part of a vector, or such a polynucleotide or polypeptide may be part of a composition. Since the carrier or composition is not a component of its natural environment, they are still isolated.
  • isolated refers to the separation of a substance from its original environment (if it is a natural substance, the original environment is the natural environment).
  • polynucleotides and polypeptides in a natural state in a living cell are not isolated and purified, but the same polynucleotides or polypeptides are separated and purified if they are separated from other substances existing in the natural state. .
  • isolated human ribosomal protein L23 means that human ribosomal protein L2 3 is substantially free of other proteins, lipids, sugars, or other substances with which it is naturally associated. Those skilled in the art can purify human ribosomal protein L23 using standard protein purification techniques. Substantially pure polypeptides can produce a single main band on a non-reducing polyacrylamide gel. The purity of the human ribosomal protein L23 polypeptide can be analyzed by amino acid sequence.
  • the present invention provides a new polypeptide, human ribosomal protein L23, which is basically composed of the amino acid sequence shown in SEQ ID NO: 2.
  • the polypeptide of the present invention may be a recombinant polypeptide, a natural polypeptide, a synthetic polypeptide, A recombinant polypeptide is preferred.
  • the polypeptides of the present invention can be naturally purified products or chemically synthesized products, or can be produced from prokaryotic or eukaryotic hosts (eg, bacteria, yeast, higher plants, insects, and mammalian cells) using recombinant techniques. Depending on the host used in the recombinant production protocol, the polypeptide of the invention may be glycosylated, or it may be non-glycosylated. Polypeptides of the invention may also include or exclude starting methionine residues.
  • the invention also includes fragments, derivatives and analogs of human ribosomal protein L23.
  • fragment refers to a polypeptide that substantially maintains the same biological function or activity of the human ribosomal protein L23 of the present invention.
  • a fragment, derivative or analog of the polypeptide of the present invention may be: (I) a kind in which one or more amino acid residues are substituted with conservative or non-conservative amino acid residues (preferably conservative amino acid residues), and the substitution
  • the amino acid may or may not be encoded by a genetic codon; or ( ⁇ ) such a type in which one or more amino acid residues are substituted with other groups to include a substituent; or (III) such One, in which the mature polypeptide is fused to another compound (such as a compound that prolongs the half-life of the polypeptide, such as polyethylene glycol); or (IV) such a polypeptide sequence in which the additional amino acid sequence is fused into the mature polypeptide ( Such as the leader sequence or secreted sequence or the sequence used to purify this polypeptide or protease sequence)
  • such fragments, derivatives and analogs are considered to be within the knowledge of those skilled in the art.
  • the present invention provides an isolated nucleic acid (polynucleotide), which basically consists of a polynucleotide encoding a polypeptide having the amino acid sequence of SEQ ID NO: 2.
  • the polynucleotide sequence of the present invention includes a nucleotide sequence of SEQ ID NO: 1.
  • the polynucleotide of the present invention is found from a cDNA library of human fetal brain tissue. It contains a polynucleotide sequence of 707 bases in length and its open reading frame (20-640) encodes 206 amino acids. Based on the amino acid sequence homology comparison, it was found that this polypeptide has 33% homology with the L22 protein, and it can be deduced that the human ribosomal protein L23 has a similar structure and function to the L22 protein.
  • the polynucleotide of the present invention may be in the form of DNA or RNA.
  • DNA forms include cDM, genomic DNA or synthetic DNA.
  • DNA can be single-stranded or double-stranded.
  • DNA can be coding or non-coding.
  • the coding region sequence encoding the mature polypeptide may be the same as the coding region sequence shown in SEQ ID NO: 1 or it may be a degenerate variant.
  • a "degenerate variant" refers to a nucleic acid sequence encoding a protein or polypeptide having SEQ ID NO: 2 but different from the coding region sequence shown in SEQ ID NO: 1 in the present invention.
  • the polynucleotide encoding the mature polypeptide of SEQ ID NO: 2 includes: only the coding sequence of the mature polypeptide; the coding sequence of the mature polypeptide and various additional coding sequences; the coding sequence of the mature polypeptide (and optional additional coding sequences) Coded sequences) and non-coded sequences.
  • polynucleotide encoding a polypeptide refers to a polynucleotide that includes the polypeptide and a polynucleotide that includes additional coding and / or non-coding sequences.
  • the invention also relates to variants of the polynucleotides described above, which encode polypeptides or fragments, analogs and derivatives of polypeptides having the same amino acid sequence as the invention.
  • This polynucleotide variant can be a naturally occurring allelic variant or a non-naturally occurring variant.
  • These nucleotide variants include substitution variants, deletion variants, and insertion variants.
  • an allelic variant is an alternative form of a polynucleotide that may be a substitution, deletion, or insertion of one or more nucleotides, but does not substantially change the function of the polypeptide it encodes .
  • the invention also relates to a polynucleotide that hybridizes to the sequence described above (having at least 50%, preferably 70% identity between the two sequences).
  • the present invention particularly relates to polynucleotides that can hybridize to the polynucleotides of the present invention under stringent conditions.
  • "strict conditions” means: (1) hybridization and elution at lower ionic strength and higher temperature, such as 0.2xSSC, 0.1 ° /.
  • the polypeptide encoded by the hybridizable polynucleotide has the same biological function and activity as the mature polypeptide shown in SEQ ID NO: 2.
  • nucleic acid fragments that hybridize to the sequences described above.
  • a "nucleic acid fragment” contains at least 10 nucleotides in length, preferably at least 20-30 nucleotides, more preferably at least 50-60 nucleotides, and most preferably at least 100 nuclei. Glycylic acid or more. Nucleic acid fragments can also be used in nucleic acid amplification techniques, such as PCR, to identify and / or isolate polynucleotides encoding human ribosomal protein L23.
  • polypeptides and polynucleotides in the present invention are preferably provided in an isolated form and are more preferably purified to homogeneity.
  • polynucleotide sequence encoding the human ribosomal protein L23 of the present invention can be obtained by various methods.
  • polynucleotides are isolated using hybridization techniques well known in the art. These techniques include, but are not limited to: 1) hybridization of probes to genomic or cDNA libraries to detect homologous polynucleotide sequences, and 2) antibody screening of expression libraries to detect cloned polynucleosides with common structural characteristics Acid fragments.
  • the DM fragment sequence of the present invention can also be obtained by the following methods: 1) isolating the double-stranded DNA sequence from the genomic DNA; 2) chemically synthesizing the DNA sequence to obtain the double-stranded DNA of the polypeptide.
  • genomic DNA isolation is the least commonly used. Direct chemical synthesis of DNA sequences is often the method of choice. The more commonly used method is the isolation of cDNA sequences. Isolation of cDNA of interest The standard method is to isolate mMA from donor cells that highly express the gene and perform reverse transcription to form a plasmid or phage cDNA library. There are many mature techniques for extracting mRNA, and kits are also commercially available (Qiagene). The construction of cDNA libraries is also a common method (Sambrook, et al., Molecular Cloning, A Laboratory Manual, Cold Spring Harbor Laboratory. New York, 1989). Commercially available cDNA libraries are also available, such as different cDNA libraries from Clontech. When polymerase reaction technology is used in combination, even very small expression products can be cloned.
  • genes of the present invention can be selected from these cDNA libraries by conventional methods. These methods include (but are not limited to): (l) DM-DM or DNA-RNA hybridization; (2) the presence or absence of marker gene functions; (3) measuring the level of human ribosomal protein L23 transcripts; (4) Detection of gene-expressed protein products by immunological techniques or determination of biological activity. The above methods can be used singly or in combination.
  • the probe used for hybridization is homologous to any part of the polynucleotide of the present invention, and its length is at least 10 nucleotides, preferably at least 30 nucleotides, more preferably At least 50 nucleotides, preferably at least 100 nucleotides.
  • the length of the probe is usually within 2,000 nucleotides, preferably within 1000 nucleotides.
  • the probe used here is generally a DNA sequence chemically synthesized based on the gene sequence information of the present invention.
  • the genes or fragments of the present invention can of course be used as probes.
  • DNA probes can be labeled with radioisotopes, luciferin, or enzymes (such as alkaline phosphatase).
  • the protein product of human ribosomal protein L23 gene expression can be detected by immunological techniques such as Western blotting, radioimmunoprecipitation, and enzyme-linked immunosorbent assay (ELISA).
  • immunological techniques such as Western blotting, radioimmunoprecipitation, and enzyme-linked immunosorbent assay (ELISA).
  • a method for amplifying DNA / RNA by PCR is preferably used to obtain the gene of the present invention.
  • the RACE method RACE-rapid amplification of cDNA ends
  • the primers used for PCR can be appropriately based on the polynucleotide sequence information of the present invention disclosed herein. Select and synthesize using conventional methods.
  • the amplified DNA / RNA fragments can be isolated and purified by conventional methods such as by gel electrophoresis.
  • polynucleotide sequence of the gene of the present invention or various DNA fragments and the like obtained as described above can be determined by a conventional method such as dideoxy chain termination method (Sanger et al. PNAS, 1977, 74: 5463-5467). Such polynucleotide sequences can also be determined using commercial sequencing kits. In order to obtain the full-length cDNA sequence, sequencing must be repeated. Sometimes it is necessary to determine the cDNA sequence of multiple clones in order to splice into a full-length cDNA sequence.
  • the present invention also relates to a vector comprising the polynucleotide of the present invention, and a host cell that is genetically engineered using the vector of the present invention or directly using the human ribosomal protein L23 coding sequence, and that the present invention is produced by recombinant technology.
  • a method of inventing the polypeptide is described in detail below.
  • a polynucleotide sequence encoding human ribosomal protein L23 can be inserted into a vector to constitute a recombinant vector containing the polynucleotide of the present invention.
  • vector refers to bacterial plasmids, phages, yeast plasmids, plant cell viruses, mammalian cell viruses such as adenoviruses, retroviruses, or other vectors well known in the art.
  • Vectors suitable for use in the present invention include, but are not limited to: T7 promoter-based expression vectors (Ros enberg, et al.
  • any plasmid and vector can be used to construct a recombinant expression vector.
  • An important feature of expression vectors is that they usually contain replication origins, promoters, marker genes, and translational regulatory elements.
  • Methods well known to those skilled in the art can be used to construct expression vectors containing a DNA sequence encoding human ribosomal protein L23 and appropriate transcriptional / translational regulatory elements. These methods include in vitro recombination MA technology, DNA synthesis technology, in vivo recombination technology, etc. (Sambroook, et al. Mo lecul ar Cloning, a Labora tory Manua, cold Harbor Labora tory. New York, 1989).
  • the DNA sequence 'J' can be effectively linked to an appropriate promoter in an expression vector to guide mRNA synthesis. Representative examples of these promoters are: the l ac or trp promoter of E.
  • the expression vector also includes a ribosome binding site and a transcription terminator for translation initiation. Insertion of enhancer sequences into the vector will enhance its transcription in higher eukaryotic cells. Enhancers are cis-acting factors expressed by DM, usually about 10 to 300 base pairs, which act on promoters to enhance gene transcription. Illustrative examples include SV40 enhancers of 100 to 270 base pairs on the late side of the origin of replication, polyoma enhancers on the late side of the origin of replication, and adenovirus enhancers.
  • the expression vector preferably contains one or more selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as dihydrofolate reductase, neomycin resistance, and green for eukaryotic cell culture.
  • selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as dihydrofolate reductase, neomycin resistance, and green for eukaryotic cell culture.
  • GFP fluorescent protein
  • tetracycline or ampicillin resistance for E. coli.
  • host cell refers to a prokaryotic cell, such as a bacterial cell; or a lower eukaryotic cell, such as yeast.
  • Cells or higher eukaryotic cells, such as mammalian cells.
  • Representative examples are: E. coli, Streptomyces; bacterial cells such as Salmonella typhimurium; fungal cells such as yeast; plant cells; insect cells such as flies
  • Transformation of a host cell with a DNA sequence described in the present invention or a recombinant vector containing the DNA sequence can be performed using conventional techniques well known to those skilled in the art.
  • the host is a prokaryote such as E. coli
  • competent cells capable of absorbing DNA can be harvested after the exponential growth phase and treated with CaCl *.
  • the steps used are well known in the art.
  • the alternative is to use MgC l 2 .
  • transformation can also be performed by electroporation.
  • the following DNA transfection methods can be used: calcium phosphate co-precipitation method, or conventional mechanical methods such as microinjection, electroporation, and liposome packaging.
  • polynucleotide sequence of the present invention can be used to express or produce recombinant human ribosomal protein L23 (Scence, 1984; 224: 1431). Generally there are the following steps:
  • the medium used in the culture may be selected from various conventional mediums according to the host cells used. Culture is performed under conditions suitable for host cell growth. After the host cells have grown to an appropriate cell density, the selected promoter is induced by a suitable method (such as temperature conversion or chemical induction), and the cells are cultured for a period of time.
  • a suitable method such as temperature conversion or chemical induction
  • the recombinant polypeptide may be coated in a cell, expressed on a cell membrane, or secreted outside the cell.
  • recombinant proteins can be isolated and purified by various separation methods using their physical, chemical, and other properties. These methods are well known to those skilled in the art. These methods include, but are not limited to: conventional renaturation treatment, protein precipitant treatment (salting out method), centrifugation, osmotic disruption, ultrasonic treatment, ultracentrifugation, molecular sieve chromatography (gel filtration), adsorption chromatography, ionization Exchange chromatography, high performance liquid chromatography (HPLC), and various other liquid chromatography techniques and combinations of these methods.
  • conventional renaturation treatment protein precipitant treatment (salting out method), centrifugation, osmotic disruption, ultrasonic treatment, ultracentrifugation, molecular sieve chromatography (gel filtration), adsorption chromatography, ionization Exchange chromatography, high performance liquid
  • Fig. 1 is a comparison diagram of the amino acid sequence homology of the human ribosomal protein L23 and L22 proteins of the present invention.
  • the upper sequence is the human ribosomal protein L23, and the lower sequence is the L22 protein.
  • Identical amino acids are represented by single character amino acids between the two sequences, and similar amino acids are represented by "+”.
  • Figure 2 is a polyacrylamide gel electrophoresis image (SDS-PAGE) of the isolated human ribosomal protein L23. 23kDa is the molecular weight of the protein. The arrow indicates the isolated protein band. The best way to implement the invention
  • the determined cDNA sequence was compared with the existing public DNA sequence database (Genebank), and it was found that the cDNA sequence of one of the clones 1012E11 was new DNA.
  • the inserted cDNA fragment contained in this clone was determined in both directions by synthesizing a series of primers.
  • the results showed that the full-length cDNA contained in the 1012E11 clone was 707 bp (as shown in Seq ID NO: 1), and there was a 621 bp open reading frame (0RF) from 20 bp to 640 bp, encoding a new protein (such as Seq ID NO : As shown in 2).
  • This clone PBS-1012E11 and the encoded protein was named human ribosomal protein L23.
  • the sequence of the human ribosomal protein L23 of the present invention and the protein sequence encoded by the same are used by the Mas t program (Basiclocal Alignment search tool) [Altschul, SF et al. J. Mol. Biol. 1990; 215: 403-10], homology search was performed in databases such as Genbank and Swissport.
  • the gene with the highest homology to the human ribosomal protein L23 of the present invention is a known L22 protein, and its encoded protein has the accession number X84708 in Genbank.
  • the protein homology results are shown in Figure 1. The two are highly homologous with 33% identity; 52% similarity.
  • Example 3 Cloning of a gene encoding human ribosomal protein L23 by RT-PCR
  • CDNA was synthesized using fetal brain total RNA as a template and oligo-dT as a primer for reverse transcription reaction. After purification with Qiagene's kit, the following primers were used for PCR amplification:
  • Primerl 5'- GGTAGCGGGAGGGCGAAAGATGGC —3, (SEQ ID NO: 3)
  • Primer2 5'- TCAATTTTTGTTTATTTTTAGAAA -3 '(SEQ ID NO: 4)
  • Primerl is a forward sequence starting at lbp of the 5th end of SEQ ID NO: 1;
  • Primer2 is the 3 'end reverse sequence in SEQ ID NO: 1.
  • Amplification reaction conditions 50 mmol / L KC1, 10 legs ol / L Tris-CI, (pH8.5), 1.5 mmol / L MgCl 2 , 200 ⁇ mol / L dNTP, lOpmol in a 50 ⁇ 1 reaction volume Primer, 1U of Taq DNA polymerase (Clontech).
  • the reaction was performed on a PE9600 DNA thermal cycler (Perkin-Elmer) under the following conditions for 25 cycles: 94 ° C 30sec; 55. C 30sec; 72. C 2min. At-? 0, (3-& ( ⁇ is a positive control and template blank is a negative control.
  • RNA extraction in one step [Anal. Biochem 1987, 162, 156-159] 0
  • This method involves acid guanidinium thiocyanate-chloroform extraction. That is, the tissue was homogenized with 4M guanidinium isothiocyanate-25raM sodium citrate, 0.2M sodium acetate (pH4.0), and 1 volume of phenol and 1/5 volume of chloroform-isoamyl alcohol (49: 1 ), Mix and centrifuge. Aspirate the aqueous layer, add isopropanol (0.8 vol) and centrifuge the mixture to obtain RNA precipitate. The resulting RNA pellet was washed with 70% ethanol, dried and dissolved in water.
  • RNA was synthesized by electrophoresis on a 1.2% agarose gel containing 20 ⁇ M 3- (N-morpholino) propanesulfonic acid (pH 7.0)-5 mM sodium acetate-IfflM EDTA-2.2M formaldehyde. It was then transferred to a nitrocellulose membrane. A - 32 PdATP was used to prepare 32 P-labeled DNA probes by random primers. DNA used The probe is the PCR amplified human ribosomal protein L23 coding region sequence (QObp to 640bp) shown in FIG.
  • the P- labeled probes (about 2 xl0 6 cpm / ml) and RNA was transferred to a nitrocellulose membrane overnight at 42 ° C in a hybridization solution, the solution comprising 50% formamide -25mM KH 2 P0 4 ( pH7.4)-5 ⁇ SSC- 5 ⁇ Denhardt's solution and 200 ⁇ g / ml salmon sperm DNA. After hybridization, the filter was washed in 1 x SSC-0.1% SDS at 55 ° C for 30 min. Then, Phosphor Imager was used for analysis and quantification.
  • Example 5 In vitro expression, isolation and purification of recombinant human ribosomal protein L23
  • Primer3 5'- CCCCATATGATGGCGGCGGCAGTACTGGGACAG —3, (Seq ID No: 5)
  • Primer4 5,-CATGGATCCTCATAGAGTGTGAACGATGGTCC -3, (Seq ID No: 6)
  • the 5 'ends of these two primers contain Ndel and BamHI restriction sites, respectively, followed by the coding sequences of the 5' and 3 'ends of the target gene, respectively.
  • the Ndel and BamHI restriction sites correspond to the expression vector plasmid pET-28b ( +) (Novagen, Cat. No. 69865.3).
  • PCR was performed using the pBS-1012Ell plasmid containing the full-length target gene as a template.
  • the PCR reaction conditions were as follows: a total volume of 50 ⁇ l, containing 10 pg of pBS-1012E11 plasmid, primers Primer 3 and Primer-4, and j is lOpmol, Advantage polymerase Mix (Clontech) 1 ⁇ 1. Cycle parameters: 94 ° C 20s, 60 ° C 30s, 68. C 2 min, a total of 25 cycles. Ndel and BamHI were used to double-digest the amplified product and the plasmid PET-28 (+), respectively, and large fragments were recovered and ligated with T4 ligase. The ligation product was transformed into E. coli DH5CC using the calcium chloride method.
  • the bacteria were collected by centrifugation, and the supernatant was collected by centrifugation. The supernatant was collected by centrifugation. The affinity chromatography column His. Bind Quick Cartridge (product of Novagen) was used to obtain 6 histidine (6His-Tag).
  • the purified human ribosomal protein L23 was purified. After SDS-PAGE electrophoresis, a single band was obtained at 23 kDa ( Figure 2). The band was transferred to a PVDF membrane and the N-terminal amino acid sequence was analyzed by the Edams hydrolysis method. As a result, the 15 amino acids at the N-terminus were identical to the 15 amino acid residues at the N-terminus shown in SEQ ID NO: 2.
  • a titer plate coated with a 15 g / ml bovine serum albumin peptide complex was used as an ELISA to determine antibody titers in rabbit serum.
  • Total IgG was isolated from antibody-positive rabbit sera using protein A-Sepharose.
  • the peptide was bound to a cyanogen bromide-activated Seph arOS e4B column, and anti-peptide antibodies were separated from the total IgG by affinity chromatography.
  • the immunoprecipitation method proved that the purified antibody could specifically bind to human ribosomal protein L23.
  • polypeptide of the present invention and the antagonists, agonists and inhibitors of the polypeptide can be directly used in the treatment of diseases, for example, it can treat malignant tumors, adrenal deficiency, skin diseases, various inflammations, HIV infections and immune diseases.
  • Ribosome proteins play an important role in the process of ribosomal translation. Deletion or inappropriate chemical modification of ribosomal proteins, or mutations in ribosomal protein genes, will affect the function of ribosomes and reduce the activity of peptide synthesis. It leads to various serious consequences, such as unsustainable cell membrane structure, abnormal cell metabolism, cell growth arrest, and even death, etc., which causes various diseases, such as developmental disorders, metabolic diseases, immune diseases, cell death, and so on.
  • the polypeptide or fragment thereof of the present invention can be used to treat or prevent diseases caused by developmental disorders, including but not limited to: spina bifida, anencephaly, congenital hydrocephalus, aqueduct malformation , Cartilage hypoplasia, dwarfism, pseudochondral hypoplasia, gonad hypoplasia, etc.
  • the polypeptide or fragment thereof of the present invention can also be used to treat or prevent diseases caused by metabolic disorders, including but not limited to: phenylketonuria , Albinism, trimethylamineuria, hypersarcosinemia, etc .; the polypeptides or fragments thereof of the present invention can also be used to treat or prevent various immunodeficiency disorders, including but not limited to: HIV, rheumatoid arthritis, chronic Active hepatitis, systemic lupus erythematosus, scleroderma, immune thrombocytopenic purpura, autoimmune interstitial nephritis, autoimmune heart disease, etc.
  • diseases caused by metabolic disorders including but not limited to: phenylketonuria , Albinism, trimethylamineuria, hypersarcosinemia, etc .
  • the polypeptides or fragments thereof of the present invention can also be used to treat or prevent various immunodeficiency disorders, including but not limited to: HIV,
  • the invention also provides screening compounds to identify raising (agonist) or repressing (antagonist) human ribosomal eggs.
  • White L23 medicament method Agonists enhance biological functions such as human ribosomal protein L23 to stimulate cell proliferation, while antagonists prevent and treat disorders related to excessive cell proliferation, such as various cancers.
  • mammalian cells or a membrane preparation expressing human ribosomal protein L23 can be cultured together with labeled human ribosomal protein L23 in the presence of a drug. The ability of the drug to increase or block this interaction is then determined.
  • Antagonists of human ribosomal protein L23 include antibodies, compounds, receptor deletions, and analogs that have been screened. Antagonists of human ribosomal protein L23 can bind to human ribosomal protein L23 and eliminate its function, or inhibit the production of the polypeptide, or bind to the active site of the polypeptide so that the polypeptide cannot perform biological functions.
  • human ribosomal protein L23 When screening compounds as antagonists, human ribosomal protein L23 can be added to a bioanalytical assay to determine whether the compound is an antagonist by measuring the effect of the compound on the interaction between human ribosomal protein L23 and its receptor. Receptor deletions and analogs that act as antagonists can be screened in the same manner as described above for screening compounds. Polypeptide molecules capable of binding to human ribosomal protein L23 can be obtained by screening a random peptide library composed of various possible combinations of amino acids bound to a solid phase. When screening, the human ribosomal protein L23 molecule should generally be labeled.
  • the present invention provides a method for producing an antibody using a polypeptide, a fragment, a derivative, an analog thereof, or a cell thereof as an antigen.
  • These antibodies can be polyclonal or monoclonal antibodies.
  • the invention also provides antibodies directed against the human ribosomal protein L23 epitope. These antibodies include (but are not limited to): polyclonal antibodies, monoclonal antibodies, 'chimeric antibodies, single chain antibodies, Fab fragments, and fragments produced by Fab expression libraries.
  • Polyclonal antibodies can be produced by injecting human ribosomal protein L23 directly into immunized animals (such as rabbits, mice, rats, etc.).
  • immunized animals such as rabbits, mice, rats, etc.
  • adjuvants can be used to enhance the immune response, including but not limited to Freund's adjuvant.
  • Techniques for preparing monoclonal antibodies against human ribosomal protein L23 include, but are not limited to, hybridoma technology (Kohler and Mistein. Nature, 1975, 256: 495-497), triple tumor technology, human beta-cell hybridoma technology, EBV-hybridoma technology, etc.
  • Chimeric antibodies that bind human constant regions and non-human variable regions can be produced using existing techniques (Morrison et al., PNAS, 1985, 81: 6851).
  • the existing technology for producing single chain antibodies (U.S. Pat No. 4946778) can also be used to produce single chain antibodies against human ribosomal protein L23.
  • Antibodies against human ribosomal protein L23 can be used in immunohistochemistry to detect human ribosomal protein L23 in biopsy specimens.
  • Monoclonal antibodies that bind to human ribosomal protein L23 can also be labeled with radioisotopes and injected into the body to track their location and distribution.
  • This radiolabeled antibody can be used as a non-invasive diagnostic method Localization of tumor cells and judgment of metastasis.
  • Antibodies can also be used to design immunotoxins that target a particular part of the body.
  • human ribosomal protein L2 3 high affinity monoclonal antibodies can covalently bind to bacterial or plant toxins (such as diphtheria toxin, ricin, ormosine, etc.).
  • a common method is to attack the amino group of an antibody with a thiol cross-linking agent such as SPDP and bind the toxin to the antibody through the exchange of disulfide bonds.
  • This hybrid antibody can be used to kill human ribosomal protein L2 3 positive cells .
  • the antibodies in the present invention can be used to treat or prevent diseases related to human ribosomal protein L23.
  • Administration of an appropriate dose of antibody can stimulate or block the production or activity of human ribosomal protein L23.
  • the invention also relates to a diagnostic test method for quantitatively and locally detecting the level of human ribosomal protein L23.
  • tests are well known in the art and include FI SH assays and radioimmunoassays.
  • the level of human ribosomal protein L2 3 detected in the test can be used to explain the importance of human ribosomal protein L23 in various diseases and to diagnose diseases in which human ribosomal protein L23 plays a role.
  • polypeptide of the present invention can also be used for peptide mapping analysis.
  • the polypeptide can be specifically cleaved by physical, chemical or enzymatic analysis, and subjected to one-dimensional or two-dimensional or three-dimensional gel electrophoresis analysis, and more preferably mass spectrometry.
  • the polynucleotide encoding human ribosomal protein L23 can also be used for a variety of therapeutic purposes.
  • Gene therapy technology can be used to treat abnormal cell proliferation, development or metabolism caused by the non-expression or abnormal / inactive expression of human ribosomal protein L23.
  • Recombinant gene therapy vectors (such as viral vectors) can be designed to express mutated human ribosomal protein L23 to inhibit endogenous human ribosomal protein L23 activity.
  • a mutated human ribosomal protein L23 may be a shortened human ribosomal protein L2 3 lacking a signaling domain, and although it can bind to downstream substrates, it lacks signaling activity.
  • the recombinant gene therapy vector can be used for treating diseases caused by abnormal expression or activity of human ribosomal protein L23.
  • Virus-derived expression vectors such as retrovirus, adenovirus, adenovirus-associated virus, herpes simplex virus, parvovirus, etc. can be used to transfer the polynucleotide encoding human ribosomal protein L23 into cells.
  • Methods for constructing recombinant viral vectors carrying a polynucleotide encoding the human ribosomal protein L23 can be found in the existing literature (Sambrook, et al.).
  • a recombinant polynucleotide encoding human ribosomal protein L23 can be packaged into liposomes and transferred into cells.
  • Methods for introducing a polynucleotide into a tissue or cell include: directly injecting the polynucleotide into a tissue in vivo; or introducing the polynucleotide into a cell in vitro through a vector (such as a virus, phage, or plasmid), and then transplanting the cell Into the body and so on.
  • a vector such as a virus, phage, or plasmid
  • Oligonucleotides including antisense RNA and DNA
  • ribozymes that inhibit human ribosomal protein L23 mRNA are also present within the scope of the invention.
  • a ribozyme is an enzyme-like RNA molecule that can specifically decompose specific RNA. Its mechanism of action is that the ribozyme molecule specifically hybridizes with a complementary target RNA and performs endonucleation.
  • Antisense RNA and DNA and ribozymes can be obtained by any existing RNA or DNA synthesis technology, such as the technology for the synthesis of oligonucleotides by solid-phase phosphoramidite chemical synthesis has been widely used.
  • Antisense RNA molecules can be obtained by in vitro or in vivo transcription of a DNA sequence encoding the RNA. This DNA sequence has been integrated downstream of the vector's RNA polymerase promoter. In order to increase the stability of a nucleic acid molecule, it can be modified in a variety of ways, such as increasing the sequence length on both sides, and the ribonucleoside linkages should use phosphate thioester or peptide bonds instead of phosphodiester bonds.
  • the polynucleotide encoding human ribosomal protein L23 can be used for the diagnosis of diseases related to human ribosomal protein L23.
  • the polynucleotide encoding human ribosomal protein L23 can be used to detect the expression of human ribosomal protein L2 3 or the abnormal expression of human ribosomal protein L23 in a disease state.
  • the DNA sequence encoding human ribosomal protein L23 can be used to hybridize biopsy specimens to determine the expression of human ribosomal protein L23.
  • Hybridization techniques include Southern blotting, Nor thern blotting, and in situ hybridization. These technical methods are all mature technologies that are publicly available, and related kits are commercially available.
  • Part or all of the polynucleotides of the present invention can be used as probes to be fixed on a microarray (Microcroix) or a DM chip (also known as a "gene chip") for analyzing differential expression analysis of genes in tissues and genes diagnosis.
  • a microarray Microcroix
  • a DM chip also known as a "gene chip”
  • Human ribosomal protein L2 3 specific primers for RNA-polymerase chain reaction (RT-PCR) in vitro amplification can also detect the human ribosomal protein L23 transcription product.
  • Detection of mutations in the human ribosomal protein L23 gene can also be used to diagnose human ribosomal protein L2 3 related diseases.
  • Human ribosomal protein L23 mutations include point mutations, translocations, deletions, recombinations, and any other abnormalities compared to the normal wild-type human ribosomal protein L2 3 DNA sequence. Mutations can be detected using existing techniques such as Sou thern blotting, DNA sequence analysis, PCR and in situ hybridization. In addition, mutations may affect protein expression. Therefore, Nor thern blotting and Western blotting can be used to indirectly determine whether a gene is mutated.
  • sequences of the invention are also valuable for chromosome identification. This sequence will specifically target a specific position of a human chromosome and can hybridize with it. Currently, specific sites for each gene on the chromosome need to be identified. Currently, only a few chromosome markers based on actual sequence data (repeat polymorphisms) are available for labeling chromosomal positions. According to the present invention, in order to associate these sequences with disease-related genes, an important first step is to locate these DNA sequences on a chromosome.
  • a PCR primer (preferably 15-35b P ) is prepared from the cDNA, and the sequence can be mapped on the chromosome. These primers were then used for PCR screening of somatic hybrid cells containing individual human chromosomes. Only that Hybrid cells containing human genes corresponding to the primers will produce amplified fragments.
  • PCR localization of somatic hybrid cells is a quick way to localize DNA to specific chromosomes.
  • oligonucleotide primers of the present invention by a similar method, a set of fragments from a specific chromosome or a large number of genomic clones can be used to achieve sublocalization.
  • Other similar strategies that can be used for chromosomal localization include in situ hybridization, chromosome pre-screening with labeled flow sorting, and pre-selection of hybridization to construct chromosome-specific cDNA libraries.
  • Fluorescent in situ hybridization (FI SH) of cDNA clones with metaphase chromosomes allows precise chromosomal localization in one step.
  • FI SH Fluorescent in situ hybridization
  • the physical location of the sequence on the chromosome can be correlated with the genetic map data. These data can be found in, for example, V. Mckus ck, Mende l i an Inher i tance in Man (available online with Johns Hopkins University Welch Med ica l L brary). Linkage analysis can then be used to determine the relationship between genes and diseases that have been mapped to chromosomal regions.
  • the difference in cDM or genomic sequence between the affected and unaffected individuals needs to be determined. If a mutation is observed in some or all of the affected individuals and the mutation is not observed in any normal individual, the mutation may be the cause of the disease. Comparing affected and unaffected individuals usually involves first looking for structural changes in the chromosome, such as deletions or translocations that are visible at the chromosomal level or detectable with cDNA sequence-based PCR. According to the resolution capabilities of current physical mapping and gene mapping technology, the cDNA accurately mapped to the chromosomal region associated with the disease can be one of 50 to 500 potentially pathogenic genes (assuming 1 megabase mapping resolution) Capacity and each 20kb corresponds to a gene).
  • the polypeptides, polynucleotides and mimetics, agonists, antagonists and inhibitors of the present invention can be used in combination with a suitable pharmaceutical carrier.
  • suitable pharmaceutical carrier can be water, glucose, ethanol, salts, buffers, glycerol, and combinations thereof.
  • the composition comprises a safe and effective amount of the polypeptide or antagonist, and carriers and excipients that do not affect the effect of the drug. These compositions can be used as drugs for the treatment of diseases.
  • the present invention also provides a kit or kit containing one or more containers containing one or more ingredients of the pharmaceutical composition of the present invention.
  • a kit or kit containing one or more containers containing one or more ingredients of the pharmaceutical composition of the present invention.
  • these containers there may be instructional instructions given by government agencies that manufacture, use, or sell pharmaceuticals or biological products, which reminders permit their administration on the human body by government agencies that manufacture, use, or sell them.
  • the polypeptide of the present invention can be used in combination with other therapeutic compounds.
  • the pharmaceutical composition can be administered in a convenient manner, such as by topical, intravenous, intraperitoneal, intramuscular, Subcutaneous, intranasal or intradermal route of administration.
  • Human ribosomal protein L23 is administered in an amount effective to treat and / or prevent a specific indication.
  • the amount and dose range of human ribosomal protein L23 administered to a patient will depend on many factors, such as the mode of administration, the health conditions of the person to be treated, and the judgment of the diagnostician.
  • Glu Lys Lys Asn Lys lie Val Tyr Pro Pro Gin Leu Pro Gly Glu
  • Met Ser lie Asp Gin Ala Leu Ala Gin Leu Glu Phe Asn Asp Lys
  • Lys Gly Ala Lys lie lie Lys Glu Val Leu Leu Glu Ala Gin Asp

Abstract

The present invention discloses a new polypeptide- human ribosomal protein L23, the polynucleotide encoding it and a method producing the polypeptide by recombinant DNA technology. The present invention further discloses a method using the polypeptide to treat various disorders, e.g. malignant neoplasm, hematopathy, HIV infection and immunological diseases and various inflammations etc. The present invention also discloses an agonist of the polypeptide and its therapeutic use. The present invention further discloses the use of the polynucleotide encoding the new human ribosomal protein L23.

Description

说 明 书  Explanation book
一种新的多肽一一人核糖体蛋白 L23和编码这种多肽的多核苷酸 技 术 领 域  A new polypeptide-human ribosomal protein L23 and polynucleotides encoding this polypeptide
本发明属于生物技术领域, 具体地说, 本发明描述了一种新的多肽一一人核 糖体蛋白 L23, 以及编码此多肽的多核苷酸序列。 本发明还涉及此多核苷酸和多 肽的制备方法和应用。 背 景 技 术  The present invention belongs to the field of biotechnology. Specifically, the present invention describes a new polypeptide, human ribosomal protein L23, and a polynucleotide sequence encoding the polypeptide. The invention also relates to a preparation method and application of the polynucleotide and the polypeptide. Background technique
核糖体是合成蛋白质的细胞器, 主要成分是蛋白质与核糖体 RNA。 核糖体蛋 白十分保守, 在核糖体的翻译过程中起重要作用, 例如: 对 rRNA 折叠成有功能 的三维结构起重要作用; 在蛋白质合成中, 核糖体的空间构象发生一系列的变化, 某些核糖体蛋白可能对核糖体的构象起 "微调" 作用; 在核糖体的结合位点上甚 至可能在催化作用中, 核糖体蛋白与 rRNA 共同行使功能。 L22核糖体蛋白是 23S rRNA早期折叠所必需的 5个核糖体蛋白之一。 L22分布在 50S核糖体亚基上, 靠 近肽基转移酶活性位点。 L22蛋白包括一个小的 c + β结构域和一个 30Α的从 Ρ亚 基上伸出的发卡结构。 此蛋白表面的大部分区域有与 rRNA 相互作用的潜力。 类 似的结构也存在于其他一些 RNA 结合蛋白中, 说明可能有相同的起源。 核糖体蛋 白的缺失或不恰当的化学修饰, 或核糖体蛋白的基因发生突变, 都将影响核糖体 的功能, 降低多肽合成的活性, 从而导致各种严重的后果, 例如细胞膜结构不能 维持、 细胞代谢失常、 细胞表面抗体减少、 细胞生长停顿甚至死亡等等, 由此引 发各种疾病, 例如发育紊乱、 代谢疾病、 免疫疾病、 细胞死亡等等。 本发明与在 栖热水生菌中发现的 L22 蛋白在蛋白水平上有 33%的同源性, 故认为本发明的基 因为一编码与 L22 蛋白相似的基因, 并具有类似的生物学功能。 本发明命名为人 核糖体蛋白 L23。  Ribosomes are organelles that synthesize proteins. The main components are proteins and ribosomal RNA. Ribosome proteins are very conserved and play an important role in the process of ribosomal translation. For example: they play an important role in folding rRNA into a functional three-dimensional structure; in protein synthesis, a series of changes in the spatial conformation of the ribosome, some Ribosomal proteins may "fine-tune" the conformation of the ribosome; at the binding site of the ribosome, it may even play a catalytic role, and the ribosome protein functions together with rRNA. L22 ribosomal protein is one of the five ribosomal proteins necessary for early folding of 23S rRNA. L22 is distributed on the 50S ribosomal subunit, close to the active site of peptidyl transferase. The L22 protein includes a small c + β domain and a 30A hairpin structure protruding from the P subunit. Most of the surface of this protein has the potential to interact with rRNA. Similar structures also exist in some other RNA-binding proteins, suggesting that they may have the same origin. Deletion or inappropriate chemical modification of ribosomal proteins, or mutations in ribosomal protein genes, will affect the function of ribosomes and reduce the activity of peptide synthesis, leading to various serious consequences, such as the inability to maintain cell membrane structures and cells. Metabolic disorders, reduced cell surface antibodies, cell growth halt, and even death, etc., cause various diseases, such as developmental disorders, metabolic diseases, immune diseases, cell death, and so on. The present invention has 33% homology at the protein level with the L22 protein found in aquatic bacteria, so it is believed that the base of the present invention is because it encodes a gene similar to the L22 protein and has similar biological functions. The present invention is named human ribosomal protein L23.
由于如上所述人核糖体蛋白 L23 蛋白在调节细胞分裂和胚胎发育等机体重要功能 中起重要作用, 而且相信这些调节过程中涉及大量的蛋白, 因而本领域中一直需要鉴定 更多参与这些过程的人核糖体蛋白 L23 蛋白, 特别是鉴定这种蛋白的氨基酸序列。 新 人核糖体蛋白 L23 蛋白编码基因的分离也为研究确定该蛋白在健康和疾病状态下的作 用提供了基础。这种蛋白可能构成开发疾病诊断和 /或治疗药的基础,因此分离其编码 DNA 是非常重要的。 发 明 的 公 开 As described above, the human ribosomal protein L23 protein plays an important role in regulating important functions of the body such as cell division and embryonic development, and it is believed that a large number of proteins are involved in these regulatory processes, so there has been a need in the art to identify more involved in these processes. Human ribosomal protein L23 protein, especially the amino acid sequence of this protein is identified. Isolation of the new human ribosomal protein L23 protein encoding gene has also been used to determine the role of this protein in health and disease states. Use provides the foundation. This protein may form the basis for developing diagnostic and / or therapeutic drugs for diseases, so isolating its coding DNA is important. Disclosure of invention
本发明的一个目的是提供分离的新的多肽一一人核糖体蛋白 L23 以及其片段、 类似物和衍生物。  It is an object of the present invention to provide isolated novel polypeptides-human ribosomal protein L23 and fragments, analogs and derivatives thereof.
本发明的另一个目的是提供编码该多肽的多核苷酸。  Another object of the invention is to provide a polynucleotide encoding the polypeptide.
本发明的另一个目的是提供含有编码人核糖体蛋白 L23 的多核苷酸的重组载 体。  Another object of the present invention is to provide a recombinant vector containing a polynucleotide encoding human ribosomal protein L23.
本发明的另一个目的是提供含有编码人核糖体蛋白 L23 的多核苷酸的基因工 程化宿主细胞。  Another object of the present invention is to provide a genetically engineered host cell containing a polynucleotide encoding human ribosomal protein L23.
本发明的另一个目的是提供生产人核糖体蛋白 L23的方法。  Another object of the present invention is to provide a method for producing human ribosomal protein L23.
本发明的另一个目的是提供针对本发明的多肽一一人核糖体蛋白 L23的抗体。 本发明的另一个目的是提供了针对本发明多肽一一人核糖体蛋白 L23 的模拟化 合物、 拮抗剂、 激动剂、 抑制剂。  Another object of the present invention is to provide an antibody against the polypeptide-human ribosomal protein L23 of the present invention. Another object of the present invention is to provide mimic compounds, antagonists, agonists, and inhibitors against the human ribosomal protein L23 of the polypeptide of the present invention.
本发明的另一个目的是提供诊断治疗与人核糖体蛋白 L23异常相关的疾病的方 法。  Another object of the present invention is to provide a method for diagnosing and treating diseases associated with abnormalities of human ribosomal protein L23.
本发明涉及一种分离的多肽, 该多肽是人源的, 它包含: 具有 SEQ I D No. 2 氨基 酸序列的多肽、 或其保守性变体、 生物活性片段或衍生物。 较佳地, 该多肽是具有 SEQ I D NO: 2氨基酸序列的多肽。  The present invention relates to an isolated polypeptide, which is of human origin, and includes: a polypeptide having the amino acid sequence of SEQ ID D. 2 or a conservative variant, biologically active fragment or derivative thereof. Preferably, the polypeptide is a polypeptide having the amino acid sequence of SEQ ID NO: 2.
本发明还涉及一种分离的多核苷酸, 它包含选自下组的一种核苷酸序列或其变体: The invention also relates to an isolated polynucleotide comprising a nucleotide sequence or a variant thereof selected from the group consisting of:
(a)编码具有 SEQ ID No. 2氨基酸序列的多肽的多核苷酸; (a) a polynucleotide encoding a polypeptide having the amino acid sequence of SEQ ID No. 2;
(b)与多核苷酸(a)互补的多核苷酸;  (b) a polynucleotide complementary to polynucleotide (a);
(c)与(a)或(b)的多核苷酸序列具有至少 70%相同性的多核苷酸。  (c) A polynucleotide having at least 70% identity to a polynucleotide sequence of (a) or (b).
更佳地, 该多核苷酸的序列是选自下组的一种: (a)具有 SEQ ID NO: 1 中 2 0 - 640位的序列; 和(b)具有 SEQ ID NO: 1 中 1-707位的序列。  More preferably, the sequence of the polynucleotide is one selected from the group consisting of: (a) a sequence having positions 20 to 640 in SEQ ID NO: 1; and (b) a sequence having 1- in SEQ ID NO: 1 707-bit sequence.
本发明另外涉及一种含有本发明多核苷酸的载体, 特别是表达载体; 一种用该载 体遗传工程化的宿主细胞, 包括转化、 转导或转染的宿主细胞; 一种包括培养所述宿主 细胞和回收表达产物的制备本发明多肽的方法。  The invention further relates to a vector, in particular an expression vector, containing the polynucleotide of the invention; a host cell genetically engineered with the vector, including a transformed, transduced or transfected host cell; and a method comprising culturing said Host cell and method of preparing the polypeptide of the present invention by recovering the expression product.
本发明还涉及一种能与本发明多肽特异性结合的抗体。 本发明还涉及一种筛选的模拟、 激活、 拮抗或抑制人核糖体蛋白 L23蛋白活性的 化合物的方法, 其包括利用本发明的多肽。 本发明还涉及用该方法获得的化合物。 The invention also relates to an antibody capable of specifically binding to a polypeptide of the invention. The invention also relates to a method for screening compounds that mimic, activate, antagonize or inhibit the activity of human ribosomal protein L23 protein, which comprises utilizing the polypeptide of the invention. The invention also relates to compounds obtained by this method.
本发明还涉及一种体外检测与人核糖体蛋白 L2 3 蛋白异常表达相关的疾病或疾病 易感性的方法, 包括检测生物样品中所述多肽或其编码多核苷酸序列中的突变, 或者检测 生物样品中本发明多肽的量或生物活性。  The invention also relates to a method for detecting a disease or susceptibility to disease associated with abnormal expression of human ribosomal protein L2 3 protein in vitro, which comprises detecting a mutation in the polypeptide or a polynucleotide sequence encoding the same in a biological sample, or detecting a biological The amount or biological activity of a polypeptide of the invention in a sample.
本发明也涉及一种药物组合物, 它含有本发明多肽或其模拟物、 激活剂、 拮抗剂或抑 制剂以及药学上可接受的载体。  The present invention also relates to a pharmaceutical composition, which comprises a polypeptide of the present invention or a mimetic thereof, an activator, an antagonist or an inhibitor, and a pharmaceutically acceptable carrier.
本发明还涉及本发明的多肽和 /或多核苷酸在制备用于治疗癌症、 发育性疾病或免 疫性疾病或其它由于人核糖体蛋白 L23表达异常所引起疾病的药物的用途  The present invention also relates to the use of the polypeptides and / or polynucleotides of the present invention in the preparation of a medicament for treating cancer, developmental or immune diseases, or other diseases caused by abnormal expression of human ribosomal protein L23.
本发明的其它方面由于本文的技术的公开, 对本领域的技术人员而言是显而易 见的。  Other aspects of the invention will be apparent to those skilled in the art from the disclosure of the techniques herein.
本说明书和权利要求书中使用的下列术语除非特别说明具有如下的含义:  The following terms used in this specification and claims have the following meanings unless specifically stated otherwise:
"核酸序列" 是指寡核苷酸、 核苷酸或多核苷酸及其片段或部分, 也可以指基因组 或合成的 DNA或 RNA , 它们可以是单链或双链的, 代表有义链或反义链。 类似地, 术语 "氨 基酸序列" 是指寡肽、 肽、 多肽或蛋白质序列及其片段或部分。 当本发明中的 "氨基酸 序列" 涉及一种天然存在的蛋白质分子的氨基酸序列时, 这种 "多肽" 或 "蛋白质" 不 意味着将氨基酸序列限制为与所述蛋白质分子相关的完整的天然氨基酸。  "Nucleic acid sequence" refers to oligonucleotides, nucleotides or polynucleotides and fragments or parts thereof, and can also refer to genomic or synthetic DNA or RNA, which can be single-stranded or double-stranded, representing the sense strand or Antisense strand. Similarly, the term "amino acid sequence" refers to an oligopeptide, peptide, polypeptide or protein sequence and fragments or portions thereof. When the "amino acid sequence" in the present invention relates to the amino acid sequence of a naturally occurring protein molecule, such "polypeptide" or "protein" does not mean to limit the amino acid sequence to a complete natural amino acid related to the protein molecule .
蛋白质或多核苷酸 "变体" 是指一种具有一个或多个氨基酸或核苷酸改变的氨基酸 序列或编码它的多核苷酸序列。 所述改变可包括氨基酸序列或核苷酸序列中氨基酸或核 苷酸的缺失、 插入或替换。 变体可具有 "保守性" 改变, 其中替换的氨基酸具有与原氨 基酸相类似的结构或化学性质, 如用亮氨酸替换异亮氨酸。 变体也可具有非保守性改变, 如用色氨酸替换甘氨酸。  A protein or polynucleotide "variant" refers to an amino acid sequence having one or more amino acids or nucleotide changes or a polynucleotide sequence encoding it. The changes may include deletions, insertions or substitutions of amino acids or nucleotides in the amino acid sequence or nucleotide sequence. Variants can have "conservative" changes, in which the substituted amino acid has a structural or chemical property similar to that of the original amino acid, such as replacing isoleucine with leucine. Variants can also have non-conservative changes, such as replacing glycine with tryptophan.
"缺失" 是指在氨基酸序列或核苷酸序列中一个或多个氨基酸或核苷酸的缺失。 "插入" 或 "添加" 是指在氨基酸序列或核苷酸序列中的改变导致与天然存在的分子相 比, 一个或多个氨基酸或核苷酸的增加。 "替换" 是指由不同的氨基酸或核苷酸替换一个或 多个氨基酸或核苷酸。  "Deletion" refers to the deletion of one or more amino acids or nucleotides in an amino acid sequence or nucleotide sequence. "Insertion" or "addition" refers to an alteration in the amino acid sequence or nucleotide sequence that results in an increase in one or more amino acids or nucleotides compared to a naturally occurring molecule. "Replacement" refers to the replacement of one or more amino acids or nucleotides with different amino acids or nucleotides.
"生物活性" 是指具有天然分子的结构、 调控或生物化学功能的蛋白质。 类似地, 术语 "免疫学活性" 是指天然的、 重组的或合成蛋白质及其片段在合适的动物或细胞中诱导特定 免疫反应以及与特异性抗体结合的能力。  "Biological activity" refers to a protein that has the structure, regulation, or biochemical function of a natural molecule. Similarly, the term "immunologically active" refers to the ability of natural, recombinant, or synthetic proteins and fragments thereof to induce a specific immune response and to bind specific antibodies in a suitable animal or cell.
"激动剂" 是指当与人核糖体蛋白 L23结合时, 一种可引起该蛋白质改变从而调节 该蛋白质活性的分子。 激动剂可以包括蛋白质、 核酸、 碳水化合物或任何其它可结合人 核糖体蛋白 L23的分子。 An "agonist" refers to a molecule that, when combined with human ribosomal protein L23, can cause the protein to change, thereby regulating the activity of the protein. Agonists can include proteins, nucleic acids, carbohydrates, or any other binding human Molecule of ribosomal protein L23.
"拮抗剂" 或 "抑制物" 是指当与人核糖体蛋白 L23结合时, 一种可封闭或调节人 核糖体蛋白 L23的生物学活性或免疫学活性的分子。 拮抗剂和抑制物可以包括蛋白质、 核酸、 碳水化合物或任何其它可结合人核糖体蛋白 L23的分子。  An "antagonist" or "inhibitor" refers to a molecule that, when combined with human ribosomal protein L23, can block or regulate the biological or immunological activity of human ribosomal protein L23. Antagonists and inhibitors may include proteins, nucleic acids, carbohydrates or any other molecule that can bind to human ribosomal protein L23.
"调节" 是指人核糖体蛋白 L23的功能发生改变, 包括蛋白质活性的升高或降低、 结合特性的改变及人核糖体蛋白 L23的任何其它生物学性质、 功能或免疫性质的改变。  "Regulation" refers to a change in the function of human ribosomal protein L23, including an increase or decrease in protein activity, a change in binding properties, and any other biological, functional, or immune properties of human ribosomal protein L23.
"基本上纯"是指基本上不含天然与其相关的其它蛋白、 脂类、 糖类或其它物质。 本领域 的技术人员能用标准的蛋白质纯化技术纯化人核糖体蛋白 L23。 基本上纯的人核糖体蛋白 L23 在非还原性聚丙烯酰胺凝胶上能产生单一的主带。 人核糖体蛋白 L23 多肽的纯度可用 氨基酸序列分析。  "Substantially pure" means substantially free of other proteins, lipids, sugars or other substances with which it is naturally associated. Those skilled in the art can purify human ribosomal protein L23 using standard protein purification techniques. The substantially pure human ribosomal protein L23 produces a single main band on a non-reducing polyacrylamide gel. The purity of human ribosomal protein L23 peptide can be analyzed by amino acid sequence.
"互补的" 或 "互补" 是指在允许的盐浓度和温度条件下通过碱基配对的多核苷酸 天然结合。 例如, 序列 "C- T-G-A" 可与互补的序列 "G-A-C- T" 结合。 两个单链分子之 间的互补可以是部分的或全部的。 核酸链之间的互补程度对于核酸链之间杂交的效率及 强度有明显影响。  "Complementary" or "complementary" refers to a polynucleotide that naturally binds by base-pairing under conditions of acceptable salt concentration and temperature. For example, the sequence "C-T-G-A" can be combined with the complementary sequence "G-A-C-T". The complementarity between two single-stranded molecules can be partial or complete. The degree of complementarity between nucleic acid strands has a significant effect on the efficiency and strength of hybridization between nucleic acid strands.
"同源性" 是指互补的程度, 可以是部分同源或完全同源。 "部分同源" 是指一种 部分互补的序列, 其至少可部分抑制完全互补的序列与靶核酸的杂交。 这种杂交的抑制 可通过在严格性程度降低的条件下进行杂交 (Sou thern印迹或 Nor thern印迹等) 来检测。 基本上同源的序列或杂交探针可竞争和抑制完全同源的序列与靶序列在的严格性程度降 低的条件下的结合。 这并不意味严格性程度降低的条件允许非特异性结合, 因为严格性 程度降低的条件要求两条序列相互的结合为特异性或选择性相互作用。  "Homology" refers to the degree of complementarity and can be partially homologous or completely homologous. "Partial homology" refers to a partially complementary sequence that at least partially inhibits hybridization of a fully complementary sequence to a target nucleic acid. This inhibition of hybridization can be detected by performing hybridization (Sou thern blot or Nor thern blot, etc.) under conditions of reduced stringency. Substantially homologous sequences or hybridization probes can compete and inhibit the binding of completely homologous sequences to the target sequence under conditions of reduced stringency. This does not mean that the conditions of reduced stringency allow non-specific binding, because the conditions of reduced stringency require that two sequences bind to each other as a specific or selective interaction.
"相同性百分率" 是指在两种或多种氨基酸或核酸序列比较中序列相同或相似的百 分率。 可用电子方法测定相同性百分率, 如通过 MEGAL IGN程序 ( Lasergene sof tware package, DNASTAR, Inc. , Madi son Wi s. ) 。 MEGALIGN程序可根据不同的方法如 Cl us ter 法比较两种或多种序列(H igg ins , D. G. 和 P. M. Sharp (1988) Gene 73: 237-244)。 Clus ter法通过检查所有配对之间的距离将各组序列排列成簇。 然后将各簇以成对或成 组分配。 两个氨基酸序列如序列 A和序列 B之间的相同性百分率通过下式计算:  "Percent identity" refers to the percentage of sequences that are identical or similar in the comparison of two or more amino acid or nucleic acid sequences. The percent identity can be determined electronically, such as by the MEGAL IGN program (Lasergene sof tware package, DNASTAR, Inc., Madi son Wis.). The MEGALIGN program can compare two or more sequences according to different methods such as Cluster method (Higgins, D. G. and P. M. Sharp (1988) Gene 73: 237-244). The Clus ter method arranges groups of sequences into clusters by checking the distance between all pairs. The clusters are then allocated in pairs or groups. The percent identity between two amino acid sequences such as sequence A and sequence B is calculated by the following formula:
序列 A与序列 B之间匹配的残基个数  Number of matching residues between sequence A and sequence B
X 100 序列 A的残基数一序列 A中间隔残基数一序列 B中间隔残基数  X 100 Number of residues in sequence A-number of spacer residues in sequence A-number of spacer residues in sequence B
也可以通过 Clus ter法或用本领域周知的方法如 Jo tun He in 测定核酸序列之间的相 同性百分率(He i n J. , (1990) Methods in emzumol ogy 183: 625-645) . Phases between nucleic acid sequences can also be determined by the Clus ter method or by methods known in the art such as Jo tun He in. Percent homosexuality (He in J., (1990) Methods in emzumol ogy 183: 625-645).
"相似性" 是指氨基酸序列之间排列对比时相应位置氨基酸残基的相同或保守性取 代的程度。 用于保守性取代的氨基酸例如, 带负电荷的氨基酸可包括天冬氨酸和谷氨酸; 带正电荷的氨基酸可包括赖氨酸和精氨酸; 具有不带电荷的头部基团有相似亲水性的氨 基酸可包括亮氨酸、 异亮氨酸和缬氨酸; 甘氨酸和丙氨酸; 天冬酰胺和谷氨酰胺; 丝氨 酸和苏氨酸; 苯丙氨酸和酪氨酸。  "Similarity" refers to the degree to which the amino acid residues at the corresponding positions are replaced by the same or conservative substitutions in the alignment between amino acid sequences. Amino acids used for conservative substitutions, for example, negatively charged amino acids may include aspartic acid and glutamic acid; positively charged amino acids may include lysine and arginine; having an uncharged head group is Similar hydrophilic amino acids may include leucine, isoleucine and valine; glycine and alanine; asparagine and glutamine; serine and threonine; phenylalanine and tyrosine.
"反义" 是指与特定的 DNA或 RNA序列互补的核苷酸序列。 "反义链" 是指与 "有义 链" 互补的核酸链。  "Antisense" refers to a nucleotide sequence that is complementary to a particular DNA or RNA sequence. "Antisense strand" refers to a nucleic acid strand that is complementary to the "sense strand".
"衍生物" 是指 HFP或编码其的核酸的化学修饰物。 这种化学修饰物可以是用烷基、 酰基或氨基替换氢原子。 核酸衍生物可编码保留天然分子的主要生物学特性的多肽。  "Derivative" refers to a chemical modification of HFP or a nucleic acid encoding it. This chemical modification may be the replacement of a hydrogen atom with an alkyl, acyl or amino group. Nucleic acid derivatives can encode polypeptides that retain the main biological properties of natural molecules.
"抗体" 是指完整的抗体分子及其片段, 如 Fa、 (&1)') 2及1^ , 其能特异性结合人 核糖体蛋白 L2 3的抗原决定簇。 "Antibody" refers to a complete antibody molecule and its fragments, such as Fa, (& 1) ') 2 and 1 ^, which can specifically bind to the epitope of human ribosomal protein L2 3.
"人源化抗体" 是指非抗原结合区域的氨基酸序列被替换变得与人抗体更为相似, 但仍保留原始结合活性的抗体。  A "humanized antibody" refers to an antibody in which the amino acid sequence of a non-antigen binding region is replaced to become more similar to a human antibody, but still retains the original binding activity.
"分离的" 一词指将物质从它原来的环境 (例如, 若是自然产生的就指其天然环境) 之中移出。 比如说, 一个自然产生的多核苷酸或多肽存在于活动物中就是没有被分离出 来, 但同样的多核苷酸或多肽同一些或全部在自然系统中与之共存的物质分开就是分离 的。 这样的多核苷酸可能是某一载体的一部分, 也可能这样的多核苷酸或多肽是某一组 合物的一部分。 既然载体或组合物不是它天然环境的成分, 它们仍然是分离的。 如本发明所用, "分离的" 是指物质从其原始环境中分离出来 (如果是天然 的物质, 原始环境即是天然环境) 。 如活体细胞内的天然状态下的多聚核苷酸和 多肽是没有分离纯化的, 但同样的多聚核苷酸或多肽如从天然状态中同存在的其 他物质中分开, 则为分离纯化的。  The term "isolated" refers to the removal of a substance from its original environment (for example, its natural environment if it occurs naturally). For example, a naturally occurring polynucleotide or polypeptide is not isolated when it is present in a living thing, but the same polynucleotide or polypeptide is separated from some or all of the substances that coexist with it in the natural system. Such a polynucleotide may be part of a vector, or such a polynucleotide or polypeptide may be part of a composition. Since the carrier or composition is not a component of its natural environment, they are still isolated. As used herein, "isolated" refers to the separation of a substance from its original environment (if it is a natural substance, the original environment is the natural environment). For example, polynucleotides and polypeptides in a natural state in a living cell are not isolated and purified, but the same polynucleotides or polypeptides are separated and purified if they are separated from other substances existing in the natural state. .
如本文所用, "分离的人核糖体蛋白 L23 " 是指人核糖体蛋白 L2 3 基本上不 含天然与其相关的其它蛋白、 脂类、 糖类或其它物质。 本领域的技术人员能用标 准的蛋白质纯化技术纯化人核糖体蛋白 L23。 基本上纯的多肽在非还原聚丙烯酰 胺凝胶上能产生单一的主带。 人核糖体蛋白 L23多肽的纯度能用氨基酸序列分析。  As used herein, "isolated human ribosomal protein L23" means that human ribosomal protein L2 3 is substantially free of other proteins, lipids, sugars, or other substances with which it is naturally associated. Those skilled in the art can purify human ribosomal protein L23 using standard protein purification techniques. Substantially pure polypeptides can produce a single main band on a non-reducing polyacrylamide gel. The purity of the human ribosomal protein L23 polypeptide can be analyzed by amino acid sequence.
本发明提供了一种新的多肽一一人核糖体蛋白 L23 , 其基本上是由 SEQ ID NO: 2 所示的氨基酸序列组成的。 本发明的多肽可以是重组多肽、 天然多肽、 合成多肽, 优选重组多肽。 本发明的多肽可以是天然纯化的产物, 或是化学合成的产物, 或使 用重组技术从原核或真核宿主(例如, 细菌、 酵母、 高等植物、 昆虫和哺乳动物细胞) 中产生。 根据重组生产方案所用的宿主, 本发明的多肽可以是糖基化的, 或可以是 非糖基化的。 本发明的多肽还可包括或不包括起始的甲硫氨酸残基。 The present invention provides a new polypeptide, human ribosomal protein L23, which is basically composed of the amino acid sequence shown in SEQ ID NO: 2. The polypeptide of the present invention may be a recombinant polypeptide, a natural polypeptide, a synthetic polypeptide, A recombinant polypeptide is preferred. The polypeptides of the present invention can be naturally purified products or chemically synthesized products, or can be produced from prokaryotic or eukaryotic hosts (eg, bacteria, yeast, higher plants, insects, and mammalian cells) using recombinant techniques. Depending on the host used in the recombinant production protocol, the polypeptide of the invention may be glycosylated, or it may be non-glycosylated. Polypeptides of the invention may also include or exclude starting methionine residues.
本发明还包括人核糖体蛋白 L23 的片段、 衍生物和类似物。 如本发明所用, 术语 "片段" 、 "衍生物" 和 "类似物" 是指基本上保持本发明的人核糖体蛋白 L23 相同的生物学功能或活性的多肽。 本发明多肽的片段、 衍生物或类似物可以 是: ( I ) 这样一种, 其中一个或多个氨基酸残基被保守或非保守氨基酸残基 (优 选的是保守氨基酸残基) 取代, 并且取代的氨基酸可以是也可以不是由遗传密码 子编码的; 或者 ( Π ) 这样一种, 其中一个或多个氨基酸残基上的某个基团被其 它基团取代包含取代基; 或者 ( I I I ) 这样一种, 其中成熟多肽与另一种化合物 (比如延长多肽半衰期的化合物, 例如聚乙二醇) 融合; 或者 ( IV ) 这样一种, 其中附加的氨基酸序列融合进成熟多肽而形成的多肽序列 (如前导序列或分泌序 列或用来纯化此多肽的序列或蛋白原序列) 通过本文的阐述, 这样的片段、 衍生 物和类似物被认为在本领域技术人员的知识范围之内。  The invention also includes fragments, derivatives and analogs of human ribosomal protein L23. As used in the present invention, the terms "fragment", "derivative" and "analog" refer to a polypeptide that substantially maintains the same biological function or activity of the human ribosomal protein L23 of the present invention. A fragment, derivative or analog of the polypeptide of the present invention may be: (I) a kind in which one or more amino acid residues are substituted with conservative or non-conservative amino acid residues (preferably conservative amino acid residues), and the substitution The amino acid may or may not be encoded by a genetic codon; or (Π) such a type in which one or more amino acid residues are substituted with other groups to include a substituent; or (III) such One, in which the mature polypeptide is fused to another compound (such as a compound that prolongs the half-life of the polypeptide, such as polyethylene glycol); or (IV) such a polypeptide sequence in which the additional amino acid sequence is fused into the mature polypeptide ( Such as the leader sequence or secreted sequence or the sequence used to purify this polypeptide or protease sequence) As explained herein, such fragments, derivatives and analogs are considered to be within the knowledge of those skilled in the art.
本发明提供了分离的核酸 (多核苷酸) , 基本由编码具有 SEQ ID NO: 2 氨基 酸序列的多肽的多核苷酸组成。 本发明的多核苷酸序列包括 SEQ ID NO: 1 的核苷 酸序列。 本发明的多核苷酸是从人胎脑组织的 cDNA 文库中发现的。 它包含的多 核苷酸序列全长为 707 个碱基, 其开放读框 ( 20-640 ) 编码了 206 个氨基酸。 根 据氨基酸序列同源比较发现, 此多肽与 L22 蛋白有 33%的同源性, 可推断出该人 核糖体蛋白 L23具有 L22蛋白相似的结构和功能。  The present invention provides an isolated nucleic acid (polynucleotide), which basically consists of a polynucleotide encoding a polypeptide having the amino acid sequence of SEQ ID NO: 2. The polynucleotide sequence of the present invention includes a nucleotide sequence of SEQ ID NO: 1. The polynucleotide of the present invention is found from a cDNA library of human fetal brain tissue. It contains a polynucleotide sequence of 707 bases in length and its open reading frame (20-640) encodes 206 amino acids. Based on the amino acid sequence homology comparison, it was found that this polypeptide has 33% homology with the L22 protein, and it can be deduced that the human ribosomal protein L23 has a similar structure and function to the L22 protein.
本发明的多核苷酸可以是 DNA形式或是 RNA形式。 DNA形式包括 cDM、 基因组 DNA或人工合成的 DNA。 DNA 可以是单链的或是双链的。 DNA 可以是编码链或非编 码链。 编码成熟多肽的编码区序列可以与 SEQ ID N0: 1 所示的编码区序列相同或 者是简并的变异体。 如本发明所用, "简并的变异体" 在本发明中是指编码具有 SEQ ID NO: 2 的蛋白质或多肽, 但与 SEQ ID NO: 1 所示的编码区序列有差别的核 酸序列。  The polynucleotide of the present invention may be in the form of DNA or RNA. DNA forms include cDM, genomic DNA or synthetic DNA. DNA can be single-stranded or double-stranded. DNA can be coding or non-coding. The coding region sequence encoding the mature polypeptide may be the same as the coding region sequence shown in SEQ ID NO: 1 or it may be a degenerate variant. As used herein, a "degenerate variant" refers to a nucleic acid sequence encoding a protein or polypeptide having SEQ ID NO: 2 but different from the coding region sequence shown in SEQ ID NO: 1 in the present invention.
编码 SEQ ID NO: 2 的成熟多肽的多核苷酸包括: 只有成熟多肽的编码序列; 成熟多肽的编码序列和各种附加编码序列; 成熟多肽的编码序列 (和任选的附加 编码序列) 以及非编码序列。 The polynucleotide encoding the mature polypeptide of SEQ ID NO: 2 includes: only the coding sequence of the mature polypeptide; the coding sequence of the mature polypeptide and various additional coding sequences; the coding sequence of the mature polypeptide (and optional additional coding sequences) Coded sequences) and non-coded sequences.
术语 "编码多肽的多核苷酸" 是指包括编码此多肽的多核苷酸和包括附加编 码和 /或非编码序列的多核苷酸。  The term "polynucleotide encoding a polypeptide" refers to a polynucleotide that includes the polypeptide and a polynucleotide that includes additional coding and / or non-coding sequences.
本发明还涉及上述描述多核苷酸的变异体, 其编码与本发明有相同的氨基酸 序列的多肽或多肽的片断、 类似物和衍生物。 此多核苷酸的变异体可以是天然发 生的等位变异体或非天然发生的变异体。 这些核苷酸变异体包括取代变异体、 缺 失变异体和插入变异体。 如本领域所知的, 等位变异体是一个多核苷酸的替换形 式, 它可能是一个或多个核苷酸的取代、 缺失或插入, 但不会从实质上改变其编 码的多肽的功能。  The invention also relates to variants of the polynucleotides described above, which encode polypeptides or fragments, analogs and derivatives of polypeptides having the same amino acid sequence as the invention. This polynucleotide variant can be a naturally occurring allelic variant or a non-naturally occurring variant. These nucleotide variants include substitution variants, deletion variants, and insertion variants. As known in the art, an allelic variant is an alternative form of a polynucleotide that may be a substitution, deletion, or insertion of one or more nucleotides, but does not substantially change the function of the polypeptide it encodes .
本发明还涉及与以上所描述的序列杂交的多核苷酸 (两个序列之间具有至少 50% , 优选具有 70%的相同性) 。 本发明特别涉及在严格条件下与本发明所述多核 苷酸可杂交的多核苷酸。 在本发明中, "严格条件" 是指: (1)在较低离子强度和 较高温度下的杂交和洗脱, 如 0. 2xSSC, 0. 1°/。SDS, 60 °C ;或(2)杂交时加用变性剂, 如 50% (v/v)甲酰胺, 0. 1%小牛血清 / 0. l%F ico l l , 42 °C等; 或(3)仅在两条序列之 间的相同性至少在 95%以上,更好是 97%以上时才发生杂交。 并且, 可杂交的多核 苷酸编码的多肽与 SEQ ID NO: 2所示的成熟多肽有相同的生物学功能和活性。  The invention also relates to a polynucleotide that hybridizes to the sequence described above (having at least 50%, preferably 70% identity between the two sequences). The present invention particularly relates to polynucleotides that can hybridize to the polynucleotides of the present invention under stringent conditions. In the present invention, "strict conditions" means: (1) hybridization and elution at lower ionic strength and higher temperature, such as 0.2xSSC, 0.1 ° /. SDS, 60 ° C; or (2) adding denaturants during hybridization, such as 50% (v / v) formamide, 0.1% calf serum / 0.1% F ico ll, 42 ° C, etc .; or (3) Hybridization occurs only when the identity between the two sequences is at least 95%, and more preferably 97%. Moreover, the polypeptide encoded by the hybridizable polynucleotide has the same biological function and activity as the mature polypeptide shown in SEQ ID NO: 2.
本发明还涉及与以上所描述的序列杂交的核酸片段。 如本发明所用, "核酸片 段"的长度至少含 10 个核苷酸, 较好是至少 20-30 个核苷酸, 更好是至少 50-60 个核苷酸, 最好是至少 100个核苷酸以上。 核酸片段也可用于核酸的扩增技术(如 PCR)以确定和 /或分离编码人核糖体蛋白 L23的多核苷酸。  The invention also relates to nucleic acid fragments that hybridize to the sequences described above. As used in the present invention, a "nucleic acid fragment" contains at least 10 nucleotides in length, preferably at least 20-30 nucleotides, more preferably at least 50-60 nucleotides, and most preferably at least 100 nuclei. Glycylic acid or more. Nucleic acid fragments can also be used in nucleic acid amplification techniques, such as PCR, to identify and / or isolate polynucleotides encoding human ribosomal protein L23.
本发明中的多肽和多核苷酸优选以分离的形式提供, 更佳地被纯化至均质。  The polypeptides and polynucleotides in the present invention are preferably provided in an isolated form and are more preferably purified to homogeneity.
本发明的编码人核糖体蛋白 L23 的特异的多核苷酸序列能用多种方法获得。 例如, 用本领域熟知的杂交技术分离多核苷酸。 这些技术包括但不局限于: 1)用 探针与基因组或 cDNA文库杂交以检出同源的多核苷酸序列, 和 2)表达文库的抗体 筛选以检出具有共同结构特征的克隆的多核苷酸片段。  The specific polynucleotide sequence encoding the human ribosomal protein L23 of the present invention can be obtained by various methods. For example, polynucleotides are isolated using hybridization techniques well known in the art. These techniques include, but are not limited to: 1) hybridization of probes to genomic or cDNA libraries to detect homologous polynucleotide sequences, and 2) antibody screening of expression libraries to detect cloned polynucleosides with common structural characteristics Acid fragments.
本发明的 DM 片段序列也能用下列方法获得: 1)从基因组 DNA 分离双链 DNA 序列; 2)化学合成 DNA序列以获得所述多肽的双链 DNA。  The DM fragment sequence of the present invention can also be obtained by the following methods: 1) isolating the double-stranded DNA sequence from the genomic DNA; 2) chemically synthesizing the DNA sequence to obtain the double-stranded DNA of the polypeptide.
上述提到的方法中, 分离基因组 DNA 最不常用。 DNA 序列的直接化学合成是 经常选用的方法。 更经常选用的方法是 cDNA 序列的分离。 分离感兴趣的 cDNA 的 标准方法是从高表达该基因的供体细胞分离 mMA并进行逆转录, 形成质粒或噬菌 体 cDNA 文库。 提取 mRNA 的方法已有多种成熟的技术, 试剂盒也可从商业途径获 得(Qiagene)。 而构建 cDNA 文库也是通常的方法(Sambrook, et al. , Molecular Cloning, A Laboratory Manual, Cold Spring Harbor Laboratory. New York, 1989)。 还可得到商业供应的 cDNA文库, 如 Clontech公司的不同 cDNA文库。 当结合使用 聚合酶反应技术时, 即使极少的表达产物也能克隆。 Of the methods mentioned above, genomic DNA isolation is the least commonly used. Direct chemical synthesis of DNA sequences is often the method of choice. The more commonly used method is the isolation of cDNA sequences. Isolation of cDNA of interest The standard method is to isolate mMA from donor cells that highly express the gene and perform reverse transcription to form a plasmid or phage cDNA library. There are many mature techniques for extracting mRNA, and kits are also commercially available (Qiagene). The construction of cDNA libraries is also a common method (Sambrook, et al., Molecular Cloning, A Laboratory Manual, Cold Spring Harbor Laboratory. New York, 1989). Commercially available cDNA libraries are also available, such as different cDNA libraries from Clontech. When polymerase reaction technology is used in combination, even very small expression products can be cloned.
可用常规方法从这些 cDNA 文库中筛选本发明的基因。 这些方法包括(但不限 于): (l)DM-DM或 DNA-RNA杂交; (2)标志基因功能的出现或丧失; (3)测定人核 糖体蛋白 L23 的转录本的水平; (4)通过免疫学技术或测定生物学活性, 来检测基 因表达的蛋白产物。 上述方法可单用, 也可多种方法联合应用。  The genes of the present invention can be selected from these cDNA libraries by conventional methods. These methods include (but are not limited to): (l) DM-DM or DNA-RNA hybridization; (2) the presence or absence of marker gene functions; (3) measuring the level of human ribosomal protein L23 transcripts; (4) Detection of gene-expressed protein products by immunological techniques or determination of biological activity. The above methods can be used singly or in combination.
在第(1)种方法中, 杂交所用的探针是与本发明的多核苷酸的任何一部分同 源, 其长度至少 10个核苷酸, 较好是至少 30个核苷酸, 更好是至少 50个核苷酸, 最好是至少 100个核苷酸。 此外, 探针的长度通常在 2000个核苷酸之内, 较佳的 为 1000个核苷酸之内。 此处所用的探针通常是在本发明的基因序列信息的基础上 化学合成的 DNA序列。 本发明的基因本身或者片段当然可以用作探针。 DNA探针的 标记可用放射性同位素, 荧光素或酶(如碱性磷酸酶)等。  In the method (1), the probe used for hybridization is homologous to any part of the polynucleotide of the present invention, and its length is at least 10 nucleotides, preferably at least 30 nucleotides, more preferably At least 50 nucleotides, preferably at least 100 nucleotides. In addition, the length of the probe is usually within 2,000 nucleotides, preferably within 1000 nucleotides. The probe used here is generally a DNA sequence chemically synthesized based on the gene sequence information of the present invention. The genes or fragments of the present invention can of course be used as probes. DNA probes can be labeled with radioisotopes, luciferin, or enzymes (such as alkaline phosphatase).
在第(4)种方法中, 检测人核糖体蛋白 L23基因表达的蛋白产物可用免疫学技 术如 Western印迹法, 放射免疫沉淀法, 酶联免疫吸附法(ELISA)等。  In the method (4), the protein product of human ribosomal protein L23 gene expression can be detected by immunological techniques such as Western blotting, radioimmunoprecipitation, and enzyme-linked immunosorbent assay (ELISA).
应用 PCR技术扩增 DNA/RNA的方法(Saiki, et al. Science 1985; 230: 1350-1354) 被优选用于获得本发明的基因。 特别是很难从文库中得到全长的 cDNA 时, 可优选 使用 RACE法(RACE- cDNA末端快速扩增法), 用于 PCR的引物可根据本文所公开的 本发明的多核苷酸序列信息适当地选择, 并可用常规方法合成。 可用常规方法如 通过凝胶电泳分离和纯化扩增的 DNA/RNA片段。  A method for amplifying DNA / RNA by PCR (Saiki, et al. Science 1985; 230: 1350-1354) is preferably used to obtain the gene of the present invention. In particular, when it is difficult to obtain full-length cDNA from a library, the RACE method (RACE-rapid amplification of cDNA ends) can be preferably used. The primers used for PCR can be appropriately based on the polynucleotide sequence information of the present invention disclosed herein. Select and synthesize using conventional methods. The amplified DNA / RNA fragments can be isolated and purified by conventional methods such as by gel electrophoresis.
如上所述得到的本发明的基因, 或者各种 DNA 片段等的多核苷酸序列可用常 规方法如双脱氧链终止法(Sanger et al. PNAS, 1977, 74: 5463-5467)测定。 这 类多核苷酸序列测定也可用商业测序试剂盒等。 为了获得全长的 cDNA序列, 测序 需反复进行。 有时需要测定多个克隆的 cDNA序列, 才能拼接成全长的 cDNA序列。  The polynucleotide sequence of the gene of the present invention or various DNA fragments and the like obtained as described above can be determined by a conventional method such as dideoxy chain termination method (Sanger et al. PNAS, 1977, 74: 5463-5467). Such polynucleotide sequences can also be determined using commercial sequencing kits. In order to obtain the full-length cDNA sequence, sequencing must be repeated. Sometimes it is necessary to determine the cDNA sequence of multiple clones in order to splice into a full-length cDNA sequence.
本发明也涉及包含本发明的多核苷酸的载体, 以及用本发明的载体或直接用 人核糖体蛋白 L23 编码序列经基因工程产生的宿主细胞, 以及经重组技术产生本 发明所述多肽的方法。 The present invention also relates to a vector comprising the polynucleotide of the present invention, and a host cell that is genetically engineered using the vector of the present invention or directly using the human ribosomal protein L23 coding sequence, and that the present invention is produced by recombinant technology. A method of inventing the polypeptide.
本发明中, 编码人核糖体蛋白 L23 的多核苷酸序列可插入到载体中, 以构成 含有本发明所述多核苷酸的重组载体。 术语 "载体" 指本领域熟知的细菌质粒、 噬菌体、 酵母质粒、 植物细胞病毒、 哺乳动物细胞病毒如腺病毒、 逆转录病毒或 其它载体。 在本发明中适用的载体包括但不限于: 在细菌中表达的基于 T7启动子 的表达载体(Ros enberg, et a l . Gene, 1987, 56: 125); 在哺乳动物细胞中表达的 pMSXND 表达载体(Lee and Na thans, J B i o Chem. 263: 3521, 1988)和在毘虫细胞 中表达的来源于杆状病毒的载体。 总之, 只要能在宿主体内复制和稳定, 任何质 粒和载体都可以用于构建重组表达载体。 表达载体的一个重要特征是通常含有复 制起始点、 启动子、 标记基因和翻译调控元件。  In the present invention, a polynucleotide sequence encoding human ribosomal protein L23 can be inserted into a vector to constitute a recombinant vector containing the polynucleotide of the present invention. The term "vector" refers to bacterial plasmids, phages, yeast plasmids, plant cell viruses, mammalian cell viruses such as adenoviruses, retroviruses, or other vectors well known in the art. Vectors suitable for use in the present invention include, but are not limited to: T7 promoter-based expression vectors (Ros enberg, et al. Gene, 1987, 56: 125) expressed in bacteria; pMSXND expression vectors expressed in mammalian cells (Lee and Na thans, JBio Chem. 263: 3521, 1988) and baculovirus-derived vectors expressed in miracidial cells. In short, as long as it can be replicated and stabilized in the host, any plasmid and vector can be used to construct a recombinant expression vector. An important feature of expression vectors is that they usually contain replication origins, promoters, marker genes, and translational regulatory elements.
本领域的技术人员熟知的方法能用于构建含编码人核糖体蛋白 L23 的 DNA 序 列和合适的转录 /翻译调控元件的表达载体。 这些方法包括体外重组 MA技术、 DNA 合成技术、 体内重组技术等(Sambroook, et a l. Mo lecul ar C l oning, a Labora tory Manua l , co l d Spr ing Harbor Labora tory. New York, 1989)。 所述的 DNA序歹 'J可 有效连接到表达载体中的适当启动子上, 以指导 mRNA合成。 这些启动子的代表性 例子有: 大肠杆菌的 l ac或 trp启动子; λ噬菌体的 PL启动子; 真核启动子包括 CMV 立即早期启动子、 HSV胸苷激酶启动子、 早期和晚期 SV40 启动子、 反转录病 毒的 LTRs 和其它一些已知的可控制基因在原核细胞或真核细胞或其病毒中表达的 启动子。 表达载体还包括翻译起始用的核糖体结合位点和转录终止子等。 在载体 中插入增强子序列将会使其在高等真核细胞中的转录得到增强。 增强子是 DM 表 达的顺式作用因子, 通常大约有 10到 300个碱基对, 作用于启动子以增强基因的 转录。 可举的例子包括在复制起始点晚期一侧的 100到 270个碱基对的 SV40增强 子、 在复制起始点晚期一侧的多瘤增强子以及腺病毒增强子等。 Methods well known to those skilled in the art can be used to construct expression vectors containing a DNA sequence encoding human ribosomal protein L23 and appropriate transcriptional / translational regulatory elements. These methods include in vitro recombination MA technology, DNA synthesis technology, in vivo recombination technology, etc. (Sambroook, et al. Mo lecul ar Cloning, a Labora tory Manua, cold Harbor Labora tory. New York, 1989). The DNA sequence 'J' can be effectively linked to an appropriate promoter in an expression vector to guide mRNA synthesis. Representative examples of these promoters are: the l ac or trp promoter of E. coli; the PL promoter of lambda phage; eukaryotic promoters include the CMV immediate early promoter, the HSV thymidine kinase promoter, and the early and late SV40 promoters Promoters, retroviral LTRs, and other known promoters that control the expression of genes in prokaryotic or eukaryotic cells or their viruses. The expression vector also includes a ribosome binding site and a transcription terminator for translation initiation. Insertion of enhancer sequences into the vector will enhance its transcription in higher eukaryotic cells. Enhancers are cis-acting factors expressed by DM, usually about 10 to 300 base pairs, which act on promoters to enhance gene transcription. Illustrative examples include SV40 enhancers of 100 to 270 base pairs on the late side of the origin of replication, polyoma enhancers on the late side of the origin of replication, and adenovirus enhancers.
此外, 表达载体优选地包含一个或多个选择性标记基因, 以提供用于选择转 化的宿主细胞的表型性状, 如真核细胞培养用的二氢叶酸还原酶、 新霉素抗性以 及绿色荧光蛋白(GFP) , 或用于大肠杆菌的四环素或氨苄青霉素抗性等。  In addition, the expression vector preferably contains one or more selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as dihydrofolate reductase, neomycin resistance, and green for eukaryotic cell culture. Fluorescent protein (GFP), or tetracycline or ampicillin resistance for E. coli.
本领域一般技术人员都清楚如何选择适当的载体 /转录调控元件 (如启动子、 增强子等) 和选择性标记基因。  Those of ordinary skill in the art will know how to select appropriate vector / transcription control elements (such as promoters, enhancers, etc.) and selectable marker genes.
本发明中, 编码人核糖体蛋白 L23 的多核苷酸或含有该多核苷酸的重组载体 附 In the present invention, a polynucleotide encoding human ribosomal protein L23 or a recombinant vector containing the polynucleotide Attach
可转图化或转导入宿主细胞, 以构成含有该多核苷酸或重组载体的基因工程化宿主 细胞。 术语 "宿主细胞" 指原核细胞, 如细菌细胞; 或是低等真核细胞, 如酵母 简 It can be transduced or transduced into host cells to constitute a genetically engineered host cell containing the polynucleotide or recombinant vector. The term "host cell" refers to a prokaryotic cell, such as a bacterial cell; or a lower eukaryotic cell, such as yeast.
细胞; 或是高等真核细胞, 如哺乳动物细胞。 代表性例子有: 大肠杆菌, 链霉菌 属; 细菌细胞如鼠说伤寒沙门氏菌; 真菌细胞如酵母; 植物细胞; 昆虫细胞如果蝇Cells; or higher eukaryotic cells, such as mammalian cells. Representative examples are: E. coli, Streptomyces; bacterial cells such as Salmonella typhimurium; fungal cells such as yeast; plant cells; insect cells such as flies
S2或 Sf 9; 动物细胞如明 CH0、 COS或 Bowes黑素瘤细胞等。 S2 or Sf 9; animal cells such as bright CH0, COS or Bowes melanoma cells.
用本发明所述的 DNA序列或含有所述 DNA序列的重组载体转化宿主细胞可用 本领域技术人员熟知的常规技术进行。 当宿主为原核生物如大肠杆菌时, 能吸收 DNA 的感受态细胞可在指数生长期后收获, 用 CaC l *处理, 所用的步骤在本领域 众所周知。 可供选择的是用 MgC l 2。 如果需要, 转化也可用电穿孔的方法进行。 当 宿主是真核生物, 可选用如下的 DNA 转染方法: 磷酸钙共沉淀法, 或者常规机械 方法如显微注射、 电穿孔、 脂质体包装等。 Transformation of a host cell with a DNA sequence described in the present invention or a recombinant vector containing the DNA sequence can be performed using conventional techniques well known to those skilled in the art. When the host is a prokaryote such as E. coli, competent cells capable of absorbing DNA can be harvested after the exponential growth phase and treated with CaCl *. The steps used are well known in the art. The alternative is to use MgC l 2 . If necessary, transformation can also be performed by electroporation. When the host is a eukaryotic organism, the following DNA transfection methods can be used: calcium phosphate co-precipitation method, or conventional mechanical methods such as microinjection, electroporation, and liposome packaging.
通过常规的重组 DNA 技术, 利用本发明的多核苷酸序列可用来表达或生产重 组的人核糖体蛋白 L23 (Sc i ence , 1984 ; 224: 1431)。 一般来说有以下步骤:  Using conventional recombinant DNA technology, the polynucleotide sequence of the present invention can be used to express or produce recombinant human ribosomal protein L23 (Scence, 1984; 224: 1431). Generally there are the following steps:
(1) .用本发明的编码人 人核糖体蛋白 L23 的多核苷酸(或变异体), 或用含有 该多核苷酸的重组表达载体转化或转导合适的宿主细胞;  (1) using the polynucleotide (or variant) encoding human human ribosomal protein L23 of the present invention, or transforming or transducing a suitable host cell with a recombinant expression vector containing the polynucleotide;
(2) .在合适的培养基中培养宿主细胞;  (2) culturing host cells in a suitable medium;
(3) .从培养基或细胞中分离、 纯化蛋白质。  (3) Isolate and purify protein from culture medium or cells.
在步骤 ( 2 ) 中, 根据所用的宿主细胞, 培养中所用的培养基可选自各种常 规培养基。 在适于宿主细胞生长的条件下进行培养。 当宿主细胞生长到适当的细 胞密度后, 用合适的方法(如温度转换或化学诱导)诱导选择的启动子, 将细胞再 培养一段时间。  In step (2), the medium used in the culture may be selected from various conventional mediums according to the host cells used. Culture is performed under conditions suitable for host cell growth. After the host cells have grown to an appropriate cell density, the selected promoter is induced by a suitable method (such as temperature conversion or chemical induction), and the cells are cultured for a period of time.
在步骤 ( 3 ) 中, 重组多肽可包被于细胞内、 或在细胞膜上表达、 或分泌到细 胞外。 如果需要, 可利用其物理的、 化学的和其它特性通过各种分离方法分离和 纯化重组的蛋白。 这些方法是本领域技术人员所熟知的。 这些方法包括但并不限 于: 常规的复性处理、 蛋白沉淀剂处理(盐析方法)、 离心、 渗透破菌、 超声波处 理、超离心、分子筛层析(凝胶过滤)、吸附层析、离子交换层析、高效液相层析(HPLC) 和其它各种液相层析技术及这些方法的结合。 下列附图用于说明本发明的具体实施方案, 而不用于限定由权利要求书所界 定的本发明范围。 In step (3), the recombinant polypeptide may be coated in a cell, expressed on a cell membrane, or secreted outside the cell. If desired, recombinant proteins can be isolated and purified by various separation methods using their physical, chemical, and other properties. These methods are well known to those skilled in the art. These methods include, but are not limited to: conventional renaturation treatment, protein precipitant treatment (salting out method), centrifugation, osmotic disruption, ultrasonic treatment, ultracentrifugation, molecular sieve chromatography (gel filtration), adsorption chromatography, ionization Exchange chromatography, high performance liquid chromatography (HPLC), and various other liquid chromatography techniques and combinations of these methods. The following drawings are used to illustrate specific embodiments of the invention, but not to limit the scope of the invention as defined by the claims.
图 1是本发明人核糖体蛋白 L23和 L22蛋白的氨基酸序列同源性比较图。 上方 序列是人核糖体蛋白 L23, 下方序列是 L22蛋白。 相同氨基酸在两个序列间用单字 符氨基酸表示, 相似氨基酸用 "+" 表示。  Fig. 1 is a comparison diagram of the amino acid sequence homology of the human ribosomal protein L23 and L22 proteins of the present invention. The upper sequence is the human ribosomal protein L23, and the lower sequence is the L22 protein. Identical amino acids are represented by single character amino acids between the two sequences, and similar amino acids are represented by "+".
图 2为分离的人核糖体蛋白 L23的聚丙烯酰胺凝胶电泳图(SDS- PAGE )。 23kDa 为蛋白质的分子量。 箭头所指为分离出的蛋白条带。 实 现 本 发 明 的 最 佳 方 式  Figure 2 is a polyacrylamide gel electrophoresis image (SDS-PAGE) of the isolated human ribosomal protein L23. 23kDa is the molecular weight of the protein. The arrow indicates the isolated protein band. The best way to implement the invention
下面结合具体实施例, 进一步阐述本发明。 应理解, 这些实施例仅用于说明 本发明而不用于限制本发明的范围。 下列实施例中未注明具体条件的实验方法, 通常按照常规条件如 Sambrook 等人, 分子克隆: 实验室手册(New York: Co ld Spr ing Harbor Laboratory Press, 1989)中所述的条件, 或按照制造厂商所建议 的条件。  The present invention is further described below with reference to specific embodiments. It should be understood that these examples are only used to illustrate the present invention and not to limit the scope of the present invention. The experimental methods without specific conditions in the following examples are usually performed according to the general conditions such as Sambrook et al., Molecular Cloning: Laboratory Manual (New York: Colling Harbor Laboratory Press, 1989), or following Conditions recommended by the manufacturer.
实施例 1 : 人核糖体蛋白 L23的克隆  Example 1: Cloning of human ribosomal protein L23
用异硫氰酸胍 /酚 /氯仿一步法提取人胎脑总 RNA。 用 Quik mRNA Isolat ion Ki t Human fetal brain total RNA was extracted by one-step method with guanidine isothiocyanate / phenol / chloroform. Quik mRNA Isolat ion Ki t
( Qiegene 公司产品) 从总 RNA中分离 poly (A) mRNA。 2ug poly (A) mRNA经逆转录形 成 cDNA。 用 Smart cDNA克隆试剂盒 (购自 Clontech ) 将 cDNA片段定向插入到 pBSK (+) 载体(Clontech公司产品)的多克隆位点上, 转化 DH5 α , 细菌形成 cDNA文库。 用 Dye terminate cycle react ion sequencing ki t (Perkin-Elmer公司产品) 和 ABI 377自动 测序仪 (Perkin- Elmer公司)测定所有克隆的 5'和 y末端的序列。 将测定的 cDNA序列与 已有的公共 DNA序列数据库 (Genebank ) 进行比较, 结果发现其中一个克隆 1012E11的 cDNA序列为新的 DNA。 通过合成一系列引物对该克隆所含的插入 cDNA片段进行双向测 定。 结果表明, 1012E11克隆所含的全长 cDNA为 707bp (如 Seq ID NO: 1所示), 从第 20bp 至 640bp有一个 621bp的开放阅读框架 ( 0RF ) , 编码一个新的蛋白质 (如 Seq ID NO: 2 所示) 。 我们将此克隆命名为 PBS-1012E11 , 编码的蛋白质命名为人核糖体蛋白 L23。 (Qiegene product) Isolate poly (A) mRNA from total RNA. 2ug poly (A) mRNA was formed into cDNA by reverse transcription. The Smart cDNA cloning kit (purchased from Clontech) was used to insert the cDNA fragment into the multiple cloning site of pBSK (+) vector (Clontech) to transform DH5α. The bacteria formed a cDNA library. Dye terminate cycle reaction ion sequencing kit (Perkin-Elmer) and ABI 377 automatic sequencer (Perkin-Elmer) were used to determine the 5 'and y-terminal sequences of all clones. The determined cDNA sequence was compared with the existing public DNA sequence database (Genebank), and it was found that the cDNA sequence of one of the clones 1012E11 was new DNA. The inserted cDNA fragment contained in this clone was determined in both directions by synthesizing a series of primers. The results showed that the full-length cDNA contained in the 1012E11 clone was 707 bp (as shown in Seq ID NO: 1), and there was a 621 bp open reading frame (0RF) from 20 bp to 640 bp, encoding a new protein (such as Seq ID NO : As shown in 2). We named this clone PBS-1012E11 and the encoded protein was named human ribosomal protein L23.
实施例 2: cDNA 克隆的同源检索 Example 2: Homologous search of cDNA clones
将本发明的人核糖体蛋白 L23的序列及其编码的蛋白序列, 用 Mas t程序 (Bas iclocal Alignment search tool) [Altschul, SF et al. J.Mol.Biol.1990; 215: 403-10] , 在 Genbank、 Swissport等数据库进行同源检索。 与 本发明的人核糖体蛋白 L23同源性最高的基因是一种已知的 L22蛋白, 其编码的蛋白在 Genbank的准入号为 X84708。蛋白质同源结果示于图 1, 两者高度同源,其相同性为 33%; 相似性为 52%。 实施例 3: 用 RT- PCR方法克隆编码人核糖体蛋白 L23的基因 The sequence of the human ribosomal protein L23 of the present invention and the protein sequence encoded by the same are used by the Mas t program (Basiclocal Alignment search tool) [Altschul, SF et al. J. Mol. Biol. 1990; 215: 403-10], homology search was performed in databases such as Genbank and Swissport. The gene with the highest homology to the human ribosomal protein L23 of the present invention is a known L22 protein, and its encoded protein has the accession number X84708 in Genbank. The protein homology results are shown in Figure 1. The two are highly homologous with 33% identity; 52% similarity. Example 3: Cloning of a gene encoding human ribosomal protein L23 by RT-PCR
用胎脑细胞总 RNA为模板,以 oligo-dT为引物进行逆转录反应合成 cDNA,用 Qiagene 的试剂盒纯化后,用下列引物进行 PCR扩增:  CDNA was synthesized using fetal brain total RNA as a template and oligo-dT as a primer for reverse transcription reaction. After purification with Qiagene's kit, the following primers were used for PCR amplification:
Primerl: 5'- GGTAGCGGGAGGGCGAAAGATGGC —3, (SEQ ID NO: 3)  Primerl: 5'- GGTAGCGGGAGGGCGAAAGATGGC —3, (SEQ ID NO: 3)
Primer2: 5'- TCAATTTTTGTTTATTTTTAGAAA -3' (SEQ ID NO: 4)  Primer2: 5'- TCAATTTTTGTTTATTTTTAGAAA -3 '(SEQ ID NO: 4)
Primerl为位于 SEQ ID NO: 1的 5,端的第 lbp开始的正向序列;  Primerl is a forward sequence starting at lbp of the 5th end of SEQ ID NO: 1;
Primer2为 SEQ ID NO: 1的中的 3'端反向序列。  Primer2 is the 3 'end reverse sequence in SEQ ID NO: 1.
扩增反应的条件: 在 50 μ 1的反应体积中含有 50mmol/L KC1, 10腿 ol/L Tris- CI, (pH8.5), 1.5mmol/L MgCl2, 200 μ mol/L dNTP, lOpmol引物, 1U的 Taq DNA聚合酶 (Clontech公司产品)。 在 PE9600型 DNA热循环仪(Perkin- Elmer公司)上按下列条件反 应 25个周期: 94°C 30sec; 55。C 30sec; 72。C 2min。 在 -?0时同时设(3-&(^ 为阳 性对照和模板空白为阴性对照。 扩增产物用 QIAGEN公司的试剂盒纯化, 用 TA克隆试剂 盒连接到 PCR载体上 (Invitrogen公司产品) 。 DNA序列分析结果表明 PCR产物的 DNA序 列与 SEQ ID NO: 1所示的 1- 707bp完全相同。 实施例 4: Northern 印迹法分析人核糖体蛋白 L23基因的表达: Amplification reaction conditions: 50 mmol / L KC1, 10 legs ol / L Tris-CI, (pH8.5), 1.5 mmol / L MgCl 2 , 200 μ mol / L dNTP, lOpmol in a 50 μ 1 reaction volume Primer, 1U of Taq DNA polymerase (Clontech). The reaction was performed on a PE9600 DNA thermal cycler (Perkin-Elmer) under the following conditions for 25 cycles: 94 ° C 30sec; 55. C 30sec; 72. C 2min. At-? 0, (3-& (^ is a positive control and template blank is a negative control. Amplification products were purified using QIAGEN's kit, and TA cloning kit was connected to the PCR vector (Invitrogen's product)). The DNA sequence analysis results show that the DNA sequence of the PCR product is exactly the same as the 1-707bp shown in SEQ ID NO: 1. Example 4: Northern blot analysis of human ribosomal protein L23 gene expression:
用一步法提取总 RNA [Anal. Biochem 1987, 162, 156-159] 0 该法包括酸性硫氰酸 胍苯酚 -氯仿抽提。 即用 4M异硫氰酸胍- 25raM柠檬酸钠, 0.2M乙酸钠 ( pH4.0 ) 对组织 进行匀浆, 加入 1倍体积的苯酚和 1/5体积的氯仿-异戊醇 (49: 1) , 混合后离心。 吸 出水相层, 加入异丙醇 (0.8体积) 并将混合物离心得到 RNA沉淀。 将得到的 RNA沉淀 用 70%乙醇洗涤, 干燥并溶于水中。 用 20 g RNA, 在含 20ηιΜ 3- (N-吗啉代) 丙磺酸 (pH7.0) - 5mM乙酸钠 - IfflM EDTA-2.2M甲醛的 1.2%琼脂糖凝胶上进行电泳。 然后转移 至硝酸纤维素膜上。 用 a-32PdATP通过随机引物法制备 32P-标记的 DNA探针。 所用的 DNA 探针为图 1所示的 PCR扩增的人核糖体蛋白 L23编码区序列 QObp至 640bp)。 将 P-标记 的探针 (约 2 xl06cpm/ml) 与转移了 RNA的硝酸纤维素膜在一溶液中于 42°C杂交过夜, 该溶液包含 50%甲酰胺 -25mM KH2P04 ( pH7.4 ) - 5 χ SSC- 5 χ Denhardt's溶液和 200 μ g/ml 鲑精 DNA。 杂交之后, 将滤膜在 1 χ SSC-0.1%SDS中于 55°C洗 30min。 然后, 用 Phosphor Imager进行分析和定量。 实施例 5: 重组人核糖体蛋白 L23的体外表达、 分离和纯化 Total RNA extraction in one step [Anal. Biochem 1987, 162, 156-159] 0 This method involves acid guanidinium thiocyanate-chloroform extraction. That is, the tissue was homogenized with 4M guanidinium isothiocyanate-25raM sodium citrate, 0.2M sodium acetate (pH4.0), and 1 volume of phenol and 1/5 volume of chloroform-isoamyl alcohol (49: 1 ), Mix and centrifuge. Aspirate the aqueous layer, add isopropanol (0.8 vol) and centrifuge the mixture to obtain RNA precipitate. The resulting RNA pellet was washed with 70% ethanol, dried and dissolved in water. Using 20 g of RNA, electrophoresis was performed on a 1.2% agarose gel containing 20 μM 3- (N-morpholino) propanesulfonic acid (pH 7.0)-5 mM sodium acetate-IfflM EDTA-2.2M formaldehyde. It was then transferred to a nitrocellulose membrane. A - 32 PdATP was used to prepare 32 P-labeled DNA probes by random primers. DNA used The probe is the PCR amplified human ribosomal protein L23 coding region sequence (QObp to 640bp) shown in FIG. The P- labeled probes (about 2 xl0 6 cpm / ml) and RNA was transferred to a nitrocellulose membrane overnight at 42 ° C in a hybridization solution, the solution comprising 50% formamide -25mM KH 2 P0 4 ( pH7.4)-5 χ SSC- 5 χ Denhardt's solution and 200 μg / ml salmon sperm DNA. After hybridization, the filter was washed in 1 x SSC-0.1% SDS at 55 ° C for 30 min. Then, Phosphor Imager was used for analysis and quantification. Example 5: In vitro expression, isolation and purification of recombinant human ribosomal protein L23
根据 SEQ ID N0: 1和图 1所示的编码区序列, 设计出一对特异性扩增引物, 序列 如下:  According to SEQ ID NO: 1 and the coding region sequence shown in FIG. 1, a pair of specific amplification primers was designed. The sequences are as follows:
Primer3: 5'- CCCCATATGATGGCGGCGGCAGTACTGGGACAG —3, ( Seq ID No: 5 )  Primer3: 5'- CCCCATATGATGGCGGCGGCAGTACTGGGACAG —3, (Seq ID No: 5)
Primer4: 5,- CATGGATCCTCATAGAGTGTGAACGATGGTCC -3, ( Seq ID No: 6 )  Primer4: 5,-CATGGATCCTCATAGAGTGTGAACGATGGTCC -3, (Seq ID No: 6)
此两段引物的 5,端分别含有 Ndel和 BamHI酶切位点, 其后分别为目的基因 5'端和 3' 端的编码序列, Ndel和 BamHI酶切位点相应于表达载体质粒 pET- 28b (+) (Novagen公司 产品, Cat.No.69865.3)上的选择性内切酶位点。 以含有全长目的基因的 pBS-1012Ell 质粒为模板, 进行 PCR反应。 PCR反应条件为: 总体积 50μ 1中含 pBS- 1012E11质粒 10pg、 引物 Pr imer 3和 Pr imer-4分另 !j为 lOpmol、 Advantage polymerase Mix ( Clontech公司 产品) 1μ 1。 循环参数: 94°C 20s, 60°C 30s, 68。C 2 min,共 25个循环。 用 Ndel和 BamHI 分别对扩增产物和质粒 PET- 28 (+)进行双酶切,分别回收大片段,并用 T4连接酶连接。 连接产物转化用氯化钙法大肠杆细菌 DH5CC,在含卡那霉素 (终浓度 30 g/ml ) 的 LB平 板培养过夜后, 用菌落 PCR方法筛选阳性克隆, 并进行测序。 挑选序列正确的阳性克 隆 (PET-1012E11 ) 用氯化钙法将重组质粒转化大肠杆菌 BL21(DE3)plySs(Novagen公 司产品)。 在含卡那霉素 (终浓度 30 g/ml ) 的 LB液体培养基中, 宿主菌 BL ( pET- 1012E11 ) 在 37。C培养至对数生长期, 加入 IPTG至终浓度 lmmol/L, 继续培养 5小时。 离心收集菌体, 经超声波破菌,离心收集上清, 用能与 6个组氨酸 (6His-Tag) 结合的 亲和层析柱 His. Bind Quick Cartridge ( Novagen公司产品) 进行层析, 得到了纯化 的目的蛋白人核糖体蛋白 L23。 经 SDS-PAGE电泳, 在 23kDa处得到一单一的条带(图 2 )。 将该条带转移至 PVDF膜上用 Edams水解法进行 N-端氨基酸序列分析, 结果 N-端 15个氨 基酸与 SEQ ID NO: 2所示的 N-端 15个氨基酸残基完全相同。 实施例 6 抗人核糖体蛋白 L23抗体的产生 The 5 'ends of these two primers contain Ndel and BamHI restriction sites, respectively, followed by the coding sequences of the 5' and 3 'ends of the target gene, respectively. The Ndel and BamHI restriction sites correspond to the expression vector plasmid pET-28b ( +) (Novagen, Cat. No. 69865.3). PCR was performed using the pBS-1012Ell plasmid containing the full-length target gene as a template. The PCR reaction conditions were as follows: a total volume of 50 μl, containing 10 pg of pBS-1012E11 plasmid, primers Primer 3 and Primer-4, and j is lOpmol, Advantage polymerase Mix (Clontech) 1 μ1. Cycle parameters: 94 ° C 20s, 60 ° C 30s, 68. C 2 min, a total of 25 cycles. Ndel and BamHI were used to double-digest the amplified product and the plasmid PET-28 (+), respectively, and large fragments were recovered and ligated with T4 ligase. The ligation product was transformed into E. coli DH5CC using the calcium chloride method. After being cultured overnight on LB plates containing kanamycin (final concentration 30 g / ml), positive clones were screened by colony PCR method and sequenced. A positive clone (PET-1012E11) with a correct sequence was selected, and the recombinant plasmid was transformed into E. coli BL21 (DE3) plySs (product of Novagen) using the calcium chloride method. The host strain BL (pET-1012E11) was 37 in LB liquid medium containing kanamycin (final concentration 30 g / ml). C. Cultivate to logarithmic growth phase, add IPTG to a final concentration of 1 mmol / L, and continue to cultivate for 5 hours. The bacteria were collected by centrifugation, and the supernatant was collected by centrifugation. The supernatant was collected by centrifugation. The affinity chromatography column His. Bind Quick Cartridge (product of Novagen) was used to obtain 6 histidine (6His-Tag). The purified human ribosomal protein L23 was purified. After SDS-PAGE electrophoresis, a single band was obtained at 23 kDa (Figure 2). The band was transferred to a PVDF membrane and the N-terminal amino acid sequence was analyzed by the Edams hydrolysis method. As a result, the 15 amino acids at the N-terminus were identical to the 15 amino acid residues at the N-terminus shown in SEQ ID NO: 2. Example 6 Production of anti-human ribosomal protein L23 antibodies
用多肽合成仪 (PE公司产品) 合成下述人核糖体蛋白 L23特异性的多肽:  The following peptides specific to human ribosomal protein L23 were synthesized using a peptide synthesizer (product of PE):
NH2-Met-A 1 a— A la— A la-Va l - Leu- G 1 y-Gln-Leu-G 1 y-A 1 a-Leu-Trp-11 e- H i s-COOH (SEQ ID NO: 7)。 将该多肽分别与血蓝蛋白和牛血清白蛋白耦合形成复合, 方法 参见: Avrameas,et a l. Immunochemis try, 1969; 6: 43。 用 4mg上述血蓝蛋白多肽复合 物加上完全弗氏佐剂免疫家兔, 15天后再用血蓝蛋白多肽复合物加不完全弗氏佐剂加 强免疫一次。 采用经 15 g/ml牛血清白蛋白多肽复合物包被的滴定板做 ELISA测定兔 血清中抗体的滴度。 用蛋白 A- Sepharose从抗体阳性的家兔血清中分离总 IgG。 将多肽 结合于溴化氰活化的 Sephar0Se4B柱上, 用亲和层析法从总 IgG中分离抗多肽抗体。 免 疫沉淀法证明纯化的抗体可特异性地与人核糖体蛋白 L23结合。 工 业 实 用 性 NH 2 -Met-A 1 a— A la— A la-Va l-Leu- G 1 y-Gln-Leu-G 1 yA 1 a-Leu-Trp-11 e- H i s-COOH (SEQ ID NO : 7). The polypeptide is coupled with hemocyanin and bovine serum albumin to form a complex, respectively. For the method, see: Avrameas, et al. Immunochemis try, 1969; 6: 43. Rabbits were immunized with 4 mg of the hemocyanin polypeptide complex plus complete Freund's adjuvant, and 15 days later, the hemocyanin polypeptide complex plus incomplete Freund's adjuvant was used to boost immunity once. A titer plate coated with a 15 g / ml bovine serum albumin peptide complex was used as an ELISA to determine antibody titers in rabbit serum. Total IgG was isolated from antibody-positive rabbit sera using protein A-Sepharose. The peptide was bound to a cyanogen bromide-activated Seph arOS e4B column, and anti-peptide antibodies were separated from the total IgG by affinity chromatography. The immunoprecipitation method proved that the purified antibody could specifically bind to human ribosomal protein L23. Industrial applicability
本发明的多肽以及该多肽的拮抗剂、 激动剂和抑制剂可直接用于疾病治疗, 例如, 可治疗恶性肿瘤、 肾上腺缺乏症、 皮肤病、 各类炎症、 HIV 感染和免疫性 疾病等。  The polypeptide of the present invention and the antagonists, agonists and inhibitors of the polypeptide can be directly used in the treatment of diseases, for example, it can treat malignant tumors, adrenal deficiency, skin diseases, various inflammations, HIV infections and immune diseases.
核糖体蛋白在核糖体的翻译过程中起重要作用, 核糖体蛋白的缺失或不恰当 的化学修饰, 或核糖体蛋白的基因发生突变, 都将影响核糖体的功能, 降低多肽 合成的活性, 从而导致各种严重的后果, 例如细胞膜结构不能维持、 细胞代谢失 常、 细胞生长停顿甚至死亡等等, 由此引发各种疾病, 例如发育紊乱、 代谢疾病、 免疫疾病、 细胞死亡等等。 具体就本发明而言, 本发明的多肽或其片段可以用来 治疗或预防发育紊乱而导致的疾病, 这些疾病包括但不限于: 脊柱裂、 无脑畸形、 先天性脑积水、 导水管畸形、 软骨发育不全性侏儒病、 假软骨发育不全症、 生殖 腺发育不全等症; 本发明的多肽或其片段还可以用来治疗或预防代谢紊乱而导致 的疾病, 包括但不限于: 苯丙酮尿症、 白化病、 三甲胺尿症、 高肌氨酸血症等; 本发明的多肽或其片段还可以用来治疗或预防各种免疫缺陷症, 包括但不限于: HIV, 类风湿性关节炎、 慢性活动性肝炎、 系统性红斑狼疮、 硬皮病、 免疫性血 小板减少性紫癜、 自身免疫性间质性肾炎、 自身免疫性心脏病等。 本发明也提供了筛选化合物以鉴定提高(激动剂)或阻遏(拮抗剂)人核糖体蛋 白 L23 的药剂的方法。 激动剂提高人核糖体蛋白 L23 刺激细胞增殖等生物功能, 而拮抗剂阻止和治疗与细胞过度增殖有关的紊乱如各种癌症。 例如, 能在药物的 存在下, 将哺乳动物细胞或表达人核糖体蛋白 L23 的膜制剂与标记的人核糖体蛋 白 L23—起培养。 然后测定药物提高或阻遏此相互作用的能力。 Ribosome proteins play an important role in the process of ribosomal translation. Deletion or inappropriate chemical modification of ribosomal proteins, or mutations in ribosomal protein genes, will affect the function of ribosomes and reduce the activity of peptide synthesis. It leads to various serious consequences, such as unsustainable cell membrane structure, abnormal cell metabolism, cell growth arrest, and even death, etc., which causes various diseases, such as developmental disorders, metabolic diseases, immune diseases, cell death, and so on. Specifically in terms of the present invention, the polypeptide or fragment thereof of the present invention can be used to treat or prevent diseases caused by developmental disorders, including but not limited to: spina bifida, anencephaly, congenital hydrocephalus, aqueduct malformation , Cartilage hypoplasia, dwarfism, pseudochondral hypoplasia, gonad hypoplasia, etc. The polypeptide or fragment thereof of the present invention can also be used to treat or prevent diseases caused by metabolic disorders, including but not limited to: phenylketonuria , Albinism, trimethylamineuria, hypersarcosinemia, etc .; the polypeptides or fragments thereof of the present invention can also be used to treat or prevent various immunodeficiency disorders, including but not limited to: HIV, rheumatoid arthritis, chronic Active hepatitis, systemic lupus erythematosus, scleroderma, immune thrombocytopenic purpura, autoimmune interstitial nephritis, autoimmune heart disease, etc. The invention also provides screening compounds to identify raising (agonist) or repressing (antagonist) human ribosomal eggs. White L23 medicament method. Agonists enhance biological functions such as human ribosomal protein L23 to stimulate cell proliferation, while antagonists prevent and treat disorders related to excessive cell proliferation, such as various cancers. For example, mammalian cells or a membrane preparation expressing human ribosomal protein L23 can be cultured together with labeled human ribosomal protein L23 in the presence of a drug. The ability of the drug to increase or block this interaction is then determined.
人核糖体蛋白 L23 的拮抗剂包括筛选出的抗体、 化合物、 受体缺失物和类似 物等。 人核糖体蛋白 L23 的拮抗剂可以与人核糖体蛋白 L23 结合并消除其功能, 或是抑制该多肽的产生, 或是与该多肽的活性位点结合使该多肽不能发挥生物学 功能。  Antagonists of human ribosomal protein L23 include antibodies, compounds, receptor deletions, and analogs that have been screened. Antagonists of human ribosomal protein L23 can bind to human ribosomal protein L23 and eliminate its function, or inhibit the production of the polypeptide, or bind to the active site of the polypeptide so that the polypeptide cannot perform biological functions.
在筛选作为拮抗剂的化合物时, 可以将人核糖体蛋白 L23 加入生物分析测定 中, 通过测定化合物对人核糖体蛋白 L23 和其受体之间相互作用的影响来确定化 合物是否是拮抗剂。 用上述筛选化合物的同样方法, 可以筛选出起拮抗剂作用的 受体缺失物和类似物。 能与人核糖体蛋白 L23 结合的多肽分子可通过筛选由各种 可能组合的氨基酸结合于固相物组成的随机多肽库而获得。 筛选时, 一般应对人 核糖体蛋白 L23分子进行标记。  When screening compounds as antagonists, human ribosomal protein L23 can be added to a bioanalytical assay to determine whether the compound is an antagonist by measuring the effect of the compound on the interaction between human ribosomal protein L23 and its receptor. Receptor deletions and analogs that act as antagonists can be screened in the same manner as described above for screening compounds. Polypeptide molecules capable of binding to human ribosomal protein L23 can be obtained by screening a random peptide library composed of various possible combinations of amino acids bound to a solid phase. When screening, the human ribosomal protein L23 molecule should generally be labeled.
本发明提供了用多肽, 及其片段、 衍生物、 类似物或它们的细胞作为抗原以 生产抗体的方法。 这些抗体可以是多克隆抗体或单克隆抗体。 本发明还提供了针 对人核糖体蛋白 L23抗原决定簇的抗体。 这些抗体包括(但不限于): 多克隆抗体、 单克隆抗体、 '嵌合抗体、 单链抗体、 Fab片段和 Fab表达文库产生的片段。  The present invention provides a method for producing an antibody using a polypeptide, a fragment, a derivative, an analog thereof, or a cell thereof as an antigen. These antibodies can be polyclonal or monoclonal antibodies. The invention also provides antibodies directed against the human ribosomal protein L23 epitope. These antibodies include (but are not limited to): polyclonal antibodies, monoclonal antibodies, 'chimeric antibodies, single chain antibodies, Fab fragments, and fragments produced by Fab expression libraries.
多克隆抗体的生产可用人核糖体蛋白 L23直接注射免疫动物 (如家兔, 小鼠, 大鼠等) 的方法得到, 多种佐剂可用于增强免疫反应, 包括但不限于弗氏佐剂等。 制备人核糖体蛋白 L23 的单克隆抗体的技术包括但不限于杂交瘤技术(Kohl er and Mi l s tein. Nature, 1975, 256: 495-497) , 三瘤技术, 人 Β-细胞杂交瘤技术, EBV- 杂交瘤技术等。 将人恒定区和非人源的可变区结合的嵌合抗体可用已有的技术生 产(Morr i son et a l , PNAS, 1985, 81: 6851)。 而已有的生产单链抗体的技术(U. S. Pa t No. 4946778)也可用于生产抗人核糖体蛋白 L23的单链抗体。  Polyclonal antibodies can be produced by injecting human ribosomal protein L23 directly into immunized animals (such as rabbits, mice, rats, etc.). A variety of adjuvants can be used to enhance the immune response, including but not limited to Freund's adjuvant. . Techniques for preparing monoclonal antibodies against human ribosomal protein L23 include, but are not limited to, hybridoma technology (Kohler and Mistein. Nature, 1975, 256: 495-497), triple tumor technology, human beta-cell hybridoma technology, EBV-hybridoma technology, etc. Chimeric antibodies that bind human constant regions and non-human variable regions can be produced using existing techniques (Morrison et al., PNAS, 1985, 81: 6851). The existing technology for producing single chain antibodies (U.S. Pat No. 4946778) can also be used to produce single chain antibodies against human ribosomal protein L23.
抗人核糖体蛋白 L23 的抗体可用于免疫组织化学技术中, 检测活检标本中的 人核糖体蛋白 L23。  Antibodies against human ribosomal protein L23 can be used in immunohistochemistry to detect human ribosomal protein L23 in biopsy specimens.
与人核糖体蛋白 L23 结合的单克隆抗体也可用放射性同位素标记, 注入体内 可跟踪其位置和分布。 这种放射性标记的抗体可作为一种非创伤性诊断方法用于 肿瘤细胞的定位和判断是否有转移。 Monoclonal antibodies that bind to human ribosomal protein L23 can also be labeled with radioisotopes and injected into the body to track their location and distribution. This radiolabeled antibody can be used as a non-invasive diagnostic method Localization of tumor cells and judgment of metastasis.
抗体还可用于设计针对体内某一特殊部位的免疫毒素。 如人核糖体蛋白 L2 3 高亲和性的单克隆抗体可与细菌或植物毒素(如白喉毒素, 蓖麻蛋白, 红豆碱等) 共价结合。 一种通常的方法是用巯基交联剂如 SPDP, 攻击抗体的氨基, 通过二硫 键的交换, 将毒素结合于抗体上, 这种杂交抗体可用于杀灭人核糖体蛋白 L2 3 阳 性的细胞。  Antibodies can also be used to design immunotoxins that target a particular part of the body. For example, human ribosomal protein L2 3 high affinity monoclonal antibodies can covalently bind to bacterial or plant toxins (such as diphtheria toxin, ricin, ormosine, etc.). A common method is to attack the amino group of an antibody with a thiol cross-linking agent such as SPDP and bind the toxin to the antibody through the exchange of disulfide bonds. This hybrid antibody can be used to kill human ribosomal protein L2 3 positive cells .
本发明中的抗体可用于治疗或预防与人核糖体蛋白 L23 相关的疾病。 给予适 当剂量的抗体可以刺激或阻断人核糖体蛋白 L23的产生或活性。  The antibodies in the present invention can be used to treat or prevent diseases related to human ribosomal protein L23. Administration of an appropriate dose of antibody can stimulate or block the production or activity of human ribosomal protein L23.
本发明还涉及定量和定位检测人核糖体蛋白 L23 水平的诊断试验方法。 这些 试验是本领域所熟知的, 且包括 FI SH测定和放射免疫测定。 试验中所检测的人核 糖体蛋白 L2 3 水平, 可以用作解释人核糖体蛋白 L23 在各种疾病中的重要性和用 于诊断人核糖体蛋白 L23起作用的疾病。  The invention also relates to a diagnostic test method for quantitatively and locally detecting the level of human ribosomal protein L23. These tests are well known in the art and include FI SH assays and radioimmunoassays. The level of human ribosomal protein L2 3 detected in the test can be used to explain the importance of human ribosomal protein L23 in various diseases and to diagnose diseases in which human ribosomal protein L23 plays a role.
本发明的多肽还可用作肽谱分析, 例如, 多肽可用物理的、 化学或酶进行特 异性切割, 并进行一维或二维或三维的凝胶电泳分析,更好的是进行质谱分析。  The polypeptide of the present invention can also be used for peptide mapping analysis. For example, the polypeptide can be specifically cleaved by physical, chemical or enzymatic analysis, and subjected to one-dimensional or two-dimensional or three-dimensional gel electrophoresis analysis, and more preferably mass spectrometry.
编码人核糖体蛋白 L23 的多核苷酸也可用于多种治疗目的。 基因治疗技术可 用于治疗由于人核糖体蛋白 L23 的无表达或异常 /无活性表达所致的细胞增殖、 发 育或代谢异常。 重组的基因治疗载体(如病毒载体)可设计用于表达变异的人核糖 体蛋白 L23, 以抑制内源性的人核糖体蛋白 L23活性。 例如, 一种变异的人核糖体 蛋白 L23可以是缩短的、 缺失了信号传导功能域的人核糖体蛋白 L2 3 , 虽可与下游 的底物结合, 但缺乏信号传导活性。 因此重组的基因治疗载体可用于治疗人核糖 体蛋白 L23 表达或活性异常所致的疾病。 来源于病毒的表达载体如逆转录病毒、 腺病毒、 腺病毒相关病毒、 单纯疱疹病毒、 细小病毒等可用于将编码人核糖体蛋 白 L23 的多核苷酸转移至细胞内。 构建携带编码人核糖体蛋白 L23 的多核苷酸的 重组病毒载体的方法可见于已有文献(Sambrook, et a l. )。 另外重组编码人核糖体 蛋白 L23的多核苷酸可包装到脂质体中转移至细胞内。  The polynucleotide encoding human ribosomal protein L23 can also be used for a variety of therapeutic purposes. Gene therapy technology can be used to treat abnormal cell proliferation, development or metabolism caused by the non-expression or abnormal / inactive expression of human ribosomal protein L23. Recombinant gene therapy vectors (such as viral vectors) can be designed to express mutated human ribosomal protein L23 to inhibit endogenous human ribosomal protein L23 activity. For example, a mutated human ribosomal protein L23 may be a shortened human ribosomal protein L2 3 lacking a signaling domain, and although it can bind to downstream substrates, it lacks signaling activity. Therefore, the recombinant gene therapy vector can be used for treating diseases caused by abnormal expression or activity of human ribosomal protein L23. Virus-derived expression vectors such as retrovirus, adenovirus, adenovirus-associated virus, herpes simplex virus, parvovirus, etc. can be used to transfer the polynucleotide encoding human ribosomal protein L23 into cells. Methods for constructing recombinant viral vectors carrying a polynucleotide encoding the human ribosomal protein L23 can be found in the existing literature (Sambrook, et al.). In addition, a recombinant polynucleotide encoding human ribosomal protein L23 can be packaged into liposomes and transferred into cells.
多核苷酸导入组织或细胞内的方法包括: 将多核苷酸直接注入到体内组织中; 或在体外通过载体(如病毒、 噬菌体或质粒等)先将多核苷酸导入细胞中, 再将细 胞移植到体内等。  Methods for introducing a polynucleotide into a tissue or cell include: directly injecting the polynucleotide into a tissue in vivo; or introducing the polynucleotide into a cell in vitro through a vector (such as a virus, phage, or plasmid), and then transplanting the cell Into the body and so on.
抑制人核糖体蛋白 L23 mRNA 的寡核苷酸(包括反义 RNA和 DNA)以及核酶也在 本发明的范围之内。 核酶是一种能特异性分解特定 RNA 的酶样 RNA 分子, 其作用 机制是核酶分子与互补的靶 RNA特异性杂交后进行核酸内切作用。反义的 RNA和 DNA 及核酶可用已有的任何 RNA 或 DNA 合成技术获得, 如固相磷酸酰胺化学合成法合 成寡核苷酸的技术已广泛应用。 反义 RNA分子可通过编码该 RNA 的 DNA序列在体 外或体内转录获得。 这种 DNA 序列已整合到载体的 RNA 聚合酶启动子的下游。 为 了增加核酸分子的稳定性, 可用多种方法对其进行修饰, 如增加两侧的序列长度, 核糖核苷之间的连接应用磷酸硫酯键或肽键而非磷酸二酯键。 Oligonucleotides (including antisense RNA and DNA) and ribozymes that inhibit human ribosomal protein L23 mRNA are also present Within the scope of the invention. A ribozyme is an enzyme-like RNA molecule that can specifically decompose specific RNA. Its mechanism of action is that the ribozyme molecule specifically hybridizes with a complementary target RNA and performs endonucleation. Antisense RNA and DNA and ribozymes can be obtained by any existing RNA or DNA synthesis technology, such as the technology for the synthesis of oligonucleotides by solid-phase phosphoramidite chemical synthesis has been widely used. Antisense RNA molecules can be obtained by in vitro or in vivo transcription of a DNA sequence encoding the RNA. This DNA sequence has been integrated downstream of the vector's RNA polymerase promoter. In order to increase the stability of a nucleic acid molecule, it can be modified in a variety of ways, such as increasing the sequence length on both sides, and the ribonucleoside linkages should use phosphate thioester or peptide bonds instead of phosphodiester bonds.
编码人核糖体蛋白 L23 的多核苷酸可用于与人核糖体蛋白 L23 的相关疾病的 诊断。 编码人核糖体蛋白 L23 的多核苷酸可用于检测人核糖体蛋白 L2 3 的表达与 否或在疾病状态下人核糖体蛋白 L23的异常表达。 如编码人核糖体蛋白 L23的 DNA 序列可用于对活检标本进行杂交以判断人核糖体蛋白 L23 的表达状况。 杂交技术 包括 Southern印迹法, Nor thern印迹法、 原位杂交等。 这些技术方法都是公开的 成熟技术, 相关的试剂盒都可从商业途径得到。 本发明的多核苷酸的一部分或全 部可作为探针固定在微阵列(M i croar ray)或 DM 芯片(又称为 "基因芯片" )上, 用于分析组织中基因的差异表达分析和基因诊断。 用人核糖体蛋白 L2 3 特异的引 物进行 RNA-聚合酶链反应(RT-PCR)体外扩增也可检测人核糖体蛋白 L23 的转录产 物。  The polynucleotide encoding human ribosomal protein L23 can be used for the diagnosis of diseases related to human ribosomal protein L23. The polynucleotide encoding human ribosomal protein L23 can be used to detect the expression of human ribosomal protein L2 3 or the abnormal expression of human ribosomal protein L23 in a disease state. For example, the DNA sequence encoding human ribosomal protein L23 can be used to hybridize biopsy specimens to determine the expression of human ribosomal protein L23. Hybridization techniques include Southern blotting, Nor thern blotting, and in situ hybridization. These technical methods are all mature technologies that are publicly available, and related kits are commercially available. Part or all of the polynucleotides of the present invention can be used as probes to be fixed on a microarray (Microcroix) or a DM chip (also known as a "gene chip") for analyzing differential expression analysis of genes in tissues and genes diagnosis. Human ribosomal protein L2 3 specific primers for RNA-polymerase chain reaction (RT-PCR) in vitro amplification can also detect the human ribosomal protein L23 transcription product.
检测人核糖体蛋白 L23基因的突变也可用于诊断人核糖体蛋白 L2 3 相关的疾 病。 人核糖体蛋白 L23 突变的形式包括与正常野生型人核糖体蛋白 L2 3 DNA 序列 相比的点突变、 易位、 缺失、 重组和其它任何异常等。 可用已有的技术如 Sou thern 印迹法、 DNA序列分析、 PCR和原位杂交检测突变。 另外, 突变有可能影响蛋白的 表达, 因此用 Nor thern印迹法、 Wes t ern印迹法可间接判断基因有无突变。  Detection of mutations in the human ribosomal protein L23 gene can also be used to diagnose human ribosomal protein L2 3 related diseases. Human ribosomal protein L23 mutations include point mutations, translocations, deletions, recombinations, and any other abnormalities compared to the normal wild-type human ribosomal protein L2 3 DNA sequence. Mutations can be detected using existing techniques such as Sou thern blotting, DNA sequence analysis, PCR and in situ hybridization. In addition, mutations may affect protein expression. Therefore, Nor thern blotting and Western blotting can be used to indirectly determine whether a gene is mutated.
本发明的序列对染色体鉴定也是有价值的。 该序列会特异性地针对某条人染 色体具体位置且并可以与其杂交。 目前, 需要鉴定染色体上的各基因的具体位点。 现在, 只有很少的基于实际序列数据(重复多态性)的染色体标记物可用于标记染 色体位置。 根据本发明, 为了将这些序列与疾病相关基因相关联, 其重要的第一 步就是将这些 DNA序列定位于染色体上。  The sequences of the invention are also valuable for chromosome identification. This sequence will specifically target a specific position of a human chromosome and can hybridize with it. Currently, specific sites for each gene on the chromosome need to be identified. Currently, only a few chromosome markers based on actual sequence data (repeat polymorphisms) are available for labeling chromosomal positions. According to the present invention, in order to associate these sequences with disease-related genes, an important first step is to locate these DNA sequences on a chromosome.
简而言之, 根据 cDNA制备 PCR引物(优选 15-35bP), 可以将序列定位于染色体 上。 然后, 将这些引物用于 PCR筛选含各条人染色体的体细胞杂合细胞。 只有那 些含有相应于引物的人基因的杂合细胞会产生扩增的片段。 In short, a PCR primer (preferably 15-35b P ) is prepared from the cDNA, and the sequence can be mapped on the chromosome. These primers were then used for PCR screening of somatic hybrid cells containing individual human chromosomes. Only that Hybrid cells containing human genes corresponding to the primers will produce amplified fragments.
体细胞杂合细胞的 PCR定位法, 是将 DNA定位到具体染色体的快捷方法。 使用 本发明的寡核苷酸引物, 通过类似方法, 可利用一组来自特定染色体的片段或大 量基因组克隆而实现亚定位。 可用于染色体定位的其它类似策略包括原位杂交、 用标记的流式分选的染色体预筛选和杂交预选, 从而构建染色体特异的 cDNA库。  PCR localization of somatic hybrid cells is a quick way to localize DNA to specific chromosomes. Using the oligonucleotide primers of the present invention, by a similar method, a set of fragments from a specific chromosome or a large number of genomic clones can be used to achieve sublocalization. Other similar strategies that can be used for chromosomal localization include in situ hybridization, chromosome pre-screening with labeled flow sorting, and pre-selection of hybridization to construct chromosome-specific cDNA libraries.
将 cDNA克隆与中期染色体进行荧光原位杂交(FI SH), 可以在一个步驟中精确 地进行染色体定位。 此技术的综述, 参见 Verma等, Human Chromosomes: a Manua l of Bas ic Techn iques , Pergamon Pres s, New York (1988)。  Fluorescent in situ hybridization (FI SH) of cDNA clones with metaphase chromosomes allows precise chromosomal localization in one step. For a review of this technology, see Verma et al., Human Chromosomes: a Manu l of Basic Techniques, Pergamon Pres s, New York (1988).
一旦序列被定位到准确的染色体位置, 此序列在染色体上的物理位置就可以 与基因图数据相关联。 这些数据可见于例如, V. Mckus i ck, Mende l i an Inher i tance in Man (可通过与 Johns Hopkins Uni vers i ty We lch Med ica l L i brary联机获得)。 然后可通过连锁分析, 确定基因与业已定位到染色体区域上的疾病之间的关系。  Once the sequence is located at the exact chromosomal location, the physical location of the sequence on the chromosome can be correlated with the genetic map data. These data can be found in, for example, V. Mckus ck, Mende l i an Inher i tance in Man (available online with Johns Hopkins University Welch Med ica l L brary). Linkage analysis can then be used to determine the relationship between genes and diseases that have been mapped to chromosomal regions.
接着, 需要测定患病和未患病个体间的 cDM或基因组序列差异。 如果在一些 或所有的患病个体中观察到某突变, 而该突变在任何正常个体中未观察到, 则该 突变可能是疾病的病因。 比较患病和未患病个体, 通常涉及首先寻找染色体中结 构的变化, 如从染色体水平可见的或用基于 cDNA序列的 PCR可检测的缺失或易位。 根据目前的物理作图和基因定位技术的分辨能力, 被精确定位至与疾病有关的染 色体区域的 cDNA , 可以是 50至 500个潜在致病基因间之一种(假定 1兆碱基作图分 辨能力和每 20kb对应于一个基因)。  Next, the difference in cDM or genomic sequence between the affected and unaffected individuals needs to be determined. If a mutation is observed in some or all of the affected individuals and the mutation is not observed in any normal individual, the mutation may be the cause of the disease. Comparing affected and unaffected individuals usually involves first looking for structural changes in the chromosome, such as deletions or translocations that are visible at the chromosomal level or detectable with cDNA sequence-based PCR. According to the resolution capabilities of current physical mapping and gene mapping technology, the cDNA accurately mapped to the chromosomal region associated with the disease can be one of 50 to 500 potentially pathogenic genes (assuming 1 megabase mapping resolution) Capacity and each 20kb corresponds to a gene).
可以将本发明的多肽、 多核苷酸及其模拟物、 激动剂、 拮抗剂和抑制剂与合 适的药物载体组合后使用。 这些载体可以是水、 葡萄糖、 乙醇、 盐类、 缓冲液、 甘油以及它们的组合。 组合物包含安全有效量的多肽或拮抗剂以及不影响药物效 果的载体和赋形剂。 这些组合物可以作为药物用于疾病治疗。  The polypeptides, polynucleotides and mimetics, agonists, antagonists and inhibitors of the present invention can be used in combination with a suitable pharmaceutical carrier. These carriers can be water, glucose, ethanol, salts, buffers, glycerol, and combinations thereof. The composition comprises a safe and effective amount of the polypeptide or antagonist, and carriers and excipients that do not affect the effect of the drug. These compositions can be used as drugs for the treatment of diseases.
本发明还提供含有一种或多种容器的药盒或试剂盒, 容器中装有一种或多种 本发明的药用组合物成分。 与这些容器一起, 可以有由制造、 使用或销售药品或 生物制品的政府管理机构所给出的指示性提示, 该提示反映出生产、 使用或销售 的政府管理机构许可其在人体上施用。 此外, 本发明的多肽可以与其它的治疗化 合物结合使用。  The present invention also provides a kit or kit containing one or more containers containing one or more ingredients of the pharmaceutical composition of the present invention. Along with these containers, there may be instructional instructions given by government agencies that manufacture, use, or sell pharmaceuticals or biological products, which reminders permit their administration on the human body by government agencies that manufacture, use, or sell them. In addition, the polypeptide of the present invention can be used in combination with other therapeutic compounds.
药物组合物可以以方便的方式给药, 如通过局部、 静脉内、 腹膜内、 肌内、 皮下、 鼻内或皮内的给药途径。 人核糖体蛋白 L23 以有效地治疗和 /或预防具体的 适应症的量来给药。 施用于患者的人核糖体蛋白 L23 的量和剂量范围将取决于许 多因素, 如给药方式、 待治疗者的健康条件和诊断医生的判断。 The pharmaceutical composition can be administered in a convenient manner, such as by topical, intravenous, intraperitoneal, intramuscular, Subcutaneous, intranasal or intradermal route of administration. Human ribosomal protein L23 is administered in an amount effective to treat and / or prevent a specific indication. The amount and dose range of human ribosomal protein L23 administered to a patient will depend on many factors, such as the mode of administration, the health conditions of the person to be treated, and the judgment of the diagnostician.
(1)一般信息: (1) General information:
( i i)发明名称: 人核糖体蛋白 L23及其编码序列  (i i) Name of the invention: Human ribosomal protein L23 and its coding sequence
( i i i)序列数目: 7  (i i i) Number of sequences: 7
(2) SEQ I D NO: 1的信息:  (2) Information of SEQ ID D NO: 1:
( i)序列特征:  (i) Sequence characteristics:
(A)长度: 707bP (A) Length: 707b P
(B)类型: 核酸  (B) Type: Nucleic acid
(C)链性: 双链  (C) Chain: double strand
(D)拓扑结构: 线性  (D) Topological structure: linear
( i i)分子类型: cDNA  (i i) Molecular type: cDNA
(x i)序列描述: SEQ I D NO: 1:  (x i) Sequence description: SEQ I D NO: 1:
GGTAGCGGGAGGGCGAAAGATGGCGGCGGCAGTACTGGGACAGTTGGGTGCGTTATGGAT ACATAACCTGAGGAGCCGGGGGAAGCTGGCCTTGGGTGTTTTACCTCAATCATATATCCA CACAAGTGCTTCTCTTGACATTTCTCGAAAATGGGAGAAGAAGAATAAAATTGTTTATCC TCCACAACTGCCTGGAGAACCTCGGAGACCAGCAGAAATCTACCACTGTCGAAGACAAAT AA AATATAGCAAAGACAAGATGTGGTATTTGGCAAA ATTG ATACGAGGAATGTCTATTGA CCAGGCTTTGGCTCAGTTGGAATTCA ATG ACA A AA AAGGGGCCA AA ATAATTAAAGAGGT TCTCTTAGAAGCACA AGATATGGCAGTG AGAGACCATAACGTGG AATTCAGGTCCAATTT ATATATAGCTGAGTCCACCTCAGGACGAGGCCAGTGCCTGAAACGCATCCGCTACCATGG CAGAGGTCGCTTTGGGATCATGGAGAAGGTTTATTGCCATTATTTTGTGA AGTTGGTGGA AGGGCCCCCACCTCCACCTGAGCCACCAAAGACGGCAGTTGCCCATGCCAAAGAGTATAT TCAGCAGCTTCGCAGCCGGACCATCGTTCACACTCTATGATGAGGAGATTCAGACTCCAC AGTGTATATATTTTGCCATTTATTTTCTAAAAATAAACAAAA ATTGA GGTAGCGGGAGGGCGAAAGATGGCGGCGGCAGTACTGGGACAGTTGGGTGCGTTATGGAT ACATAACCTGAGGAGCCGGGGGAAGCTGGCCTTGGGTGTTTTACCTCAATCATATATCCA CACAAGTGCTTCTCTTGACATTTCTCGAAAATGGGAGAAGAAGAATAAAATTGTTTATCC TCCACAACTGCCTGGAGAACCTCGGAGACCAGCAGAAATCTACCACTGTCGAAGACAAAT AA AATATAGCAAAGACAAGATGTGGTATTTGGCAAA ATTG ATACGAGGAATGTCTATTGA CCAGGCTTTGGCTCAGTTGGAATTCA ATG ACA A AA AAGGGGCCA AA ATAATTAAAGAGGT TCTCTTAGAAGCACA AGATATGGCAGTG AGAGACCATAACGTGG AATTCAGGTCCAATTT ATATATAGCTGAGTCCACCTCAGGACGAGGCCAGTGCCTGAAACGCATCCGCTACCATGG CAGAGGTCGCTTTGGGATCATGGAGAAGGTTTATTGCCATTATTTTGTGA AGTTGGTGGA AGGGCCCCCACCTCCACCTGAGCCACCAAAGACGGCAGTTGCCCATGCCAAAGAGTATAT TCAGCAGCTTCGCAGCCGGACCATCGTTCACACTCTATGATGAGGAGATTCAGACTCCAC AGTGTATATATTTTGCCATTTATTTTCTAAAAATAAACAAAA ATTGA
(3) SEQ ID NO: 2的信息: (3) Information of SEQ ID NO: 2:
(i)序列特征:  (i) Sequence characteristics:
(A)长度: 206个氨基酸  (A) Length: 206 amino acids
(B)类型: 氨基酸  (B) Type: Amino acid
(D)拓扑结构: 线性 (ii)分子类型: 多肽 (D) Topological structure: linear (ii) Molecular type: peptide
(xi)序列描述: SEQ ID NO: 2:  (xi) Sequence description: SEQ ID NO: 2:
Met Ala Ala Ala Val Leu Gly Gin Leu Gly Ala Leu Trp lie His Met Ala Ala Ala Val Leu Gly Gin Leu Gly Ala Leu Trp lie His
Asn Leu Arg Ser Arg Gly Lys Leu Ala Leu Gly Val Leu Pro GinAsn Leu Arg Ser Arg Gly Lys Leu Ala Leu Gly Val Leu Pro Gin
Ser Tyr lie His Thr Ser Ala Ser Leu Asp lie Ser Arg Lys TrpSer Tyr lie His Thr Ser Ala Ser Leu Asp lie Ser Arg Lys Trp
Glu Lys Lys Asn Lys lie Val Tyr Pro Pro Gin Leu Pro Gly GluGlu Lys Lys Asn Lys lie Val Tyr Pro Pro Gin Leu Pro Gly Glu
Pro Arg Arg Pro Ala Glu lie Tyr His Cys Arg Arg Gin lie LysPro Arg Arg Pro Ala Glu lie Tyr His Cys Arg Arg Gin lie Lys
Tyr Ser Lys Asp Lys Met Trp Tyr Leu Ala Lys Leu lie Arg GlyTyr Ser Lys Asp Lys Met Trp Tyr Leu Ala Lys Leu lie Arg Gly
Met Ser lie Asp Gin Ala Leu Ala Gin Leu Glu Phe Asn Asp LysMet Ser lie Asp Gin Ala Leu Ala Gin Leu Glu Phe Asn Asp Lys
Lys Gly Ala Lys lie lie Lys Glu Val Leu Leu Glu Ala Gin AspLys Gly Ala Lys lie lie Lys Glu Val Leu Leu Glu Ala Gin Asp
Met Ala Val Arg Asp His Asn Val Glu Phe Arg Ser Asn Leu Tyr lie Ala Glu Ser Thr Ser Gly Arg Gly Gin Cys Leu Lys Arg HeMet Ala Val Arg Asp His Asn Val Glu Phe Arg Ser Asn Leu Tyr lie Ala Glu Ser Thr Ser Gly Arg Gly Gin Cys Leu Lys Arg He
Arg Tyr His Gly Arg Gly Arg Phe Gly lie Met Glu Lys Val TyrArg Tyr His Gly Arg Gly Arg Phe Gly lie Met Glu Lys Val Tyr
Cys His Tyr Phe Val Lys Leu Val Glu Gly Pro Pro Pro Pro ProCys His Tyr Phe Val Lys Leu Val Glu Gly Pro Pro Pro Pro Pro
Glu Pro Pro Lys Thr Ala Val Ala His Ala Lys Glu Tyr He GinGlu Pro Pro Lys Thr Ala Val Ala His Ala Lys Glu Tyr He Gin
Gin Leu Arg Ser Arg Thr He Val His Thr Leu Gin Leu Arg Ser Arg Thr He Val His Thr Leu
(4) SEQ ID NO: 3的信息 (4) Information of SEQ ID NO: 3
(i)序列特征  (i) Sequence characteristics
(A)长度: 24碱基  (A) Length: 24 bases
(B)类型: 核酸  (B) Type: Nucleic acid
(C)链性: 单链  (C) Chain: single chain
(D)拓扑结构: 线性  (D) Topological structure: linear
(Π)分子类型: 寡核苷酸  (Π) Molecular type: Oligonucleotide
(xi)序列描述: SEQ ID NO: 3:  (xi) Sequence description: SEQ ID NO: 3:
GGTAGCGGGAGGGCGAAAGATGGC GGTAGCGGGAGGGCGAAAGATGGC
(5) SEQ ID NO: 4的信息 (5) Information of SEQ ID NO: 4
(i)序列特征  (i) Sequence characteristics
(A)长度: 24碱基 (B)类型: 核酸(A) Length: 24 bases (B) Type: Nucleic acid
(C)链性: 单链 (C) Chain: single chain
(D)拓朴结构: 线性  (D) Topological structure: linear
(i i)分子类型: 寡核苷酸  (i i) Molecular type: Oligonucleotide
(x i)序列描述: SEQ ID NO: 4: (x i) Sequence description: SEQ ID NO: 4:
TCAATTTTTGTTTATTTTTAGAAA TCAATTTTTGTTTATTTTTAGAAA
(6) SEQ ID NO: 5的信息 (6) Information of SEQ ID NO: 5
(i)序列特征  (i) Sequence characteristics
(A)长度: 32碱基  (A) Length: 32 bases
(B)类型: 核酸  (B) Type: Nucleic acid
(C)链性: 单链  (C) Chain: single chain
(D)拓扑结构: 线性  (D) Topological structure: linear
(i i)分子类型: 寡核苷酸  (i i) Molecular type: Oligonucleotide
(xi)序列描述: SEQ ID NO : 5: CAGCCATGGCGGGGAAGAAGAATGTTCTGTCG  (xi) Sequence description: SEQ ID NO: 5: CAGCCATGGCGGGGAAGAAGAATGTTCTGTCG
(7) SEQ ID NO: 6的信息 (7) Information of SEQ ID NO: 6
(i)序列特征  (i) Sequence characteristics
(A)长度: 29碱基  (A) Length: 29 bases
(B)类型: 核酸  (B) Type: Nucleic acid
(C)链性: 单链  (C) Chain: single chain
(D)拓扑结构: 线性  (D) Topological structure: linear
( i i)分子类型: 寡核苷酸  (i i) molecular type: oligonucleotide
(xi)序列描述: SEQ ID NO : 6: (xi) Sequence description: SEQ ID NO: 6:
CCCGGATCCCGCTGCTTGGCCTTCTTCAC CCCGGATCCCGCTGCTTGGCCTTCTTCAC
(8) SEQ ID NO: 7的信息: (8) Information of SEQ ID NO: 7:
(i)序列特征: (A)长度: 15个氨基酸 (i) Sequence characteristics: (A) Length: 15 amino acids
(B)类型: 氨基酸  (B) Type: Amino acid
(D)拓扑结构: 线性  (D) Topological structure: linear
(Π)分子类型: 多肽  (Π) Molecular type: Polypeptide
(xi)序列描述: SEQ ID NO: 7: (xi) Sequence description: SEQ ID NO: 7:
Met-Ala-Gly-Lys-Lys-Asn-Val-Leu-Ser-Ser-Leu-Ala-Val-Tyr-Ala  Met-Ala-Gly-Lys-Lys-Asn-Val-Leu-Ser-Ser-Leu-Ala-Val-Tyr-Ala

Claims

1、 一种分离的多肽-人核糖体蛋白 L23, 其特征在于它包含有: SEQ ID NO: 2 所示的氨基酸序列的多肽、 或其多肽的活性片段、 类似物或衍生物。 1. An isolated polypeptide-human ribosomal protein L23, characterized in that it comprises: a polypeptide having the amino acid sequence shown in SEQ ID NO: 2, or an active fragment, analog, or derivative thereof.
2、 如权利要求 1 所述的多肽, 其特征在于所述多肽、 类似物或衍生物的氨基 酸序列具有与 SEQ ID NO: 2所示的氨基酸序列至少 95%的相同性。  2. The polypeptide according to claim 1, characterized in that the amino acid sequence of the polypeptide, analog or derivative has at least 95% identity with the amino acid sequence shown in SEQ ID NO: 2.
3、 如权利要求 2所述的多肽, 其特征在于它包含具有 SEQ ID NO: 2 所示的氨 基酸序列的多肽。  3. The polypeptide according to claim 2, further comprising a polypeptide having an amino acid sequence represented by SEQ ID NO: 2.
4、 一种分离的多核苷酸, 其特征在于所述多核苷酸包含选自下组中的一种: 4. An isolated polynucleotide, characterized in that said polynucleotide comprises one selected from the group consisting of:
(a) 编码具有 SEQ ID NO: 2 所示氨基酸序列的多肽或其片段、 类似物、 衍生物 的多核苷酸; (a) a polynucleotide encoding a polypeptide having the amino acid sequence shown in SEQ ID NO: 2 or a fragment, analog, or derivative thereof;
(b) 与多核苷酸 (a ) 互补的多核苷酸; 或  (b) a polynucleotide complementary to polynucleotide (a); or
(c) 与 (a ) 或 (b ) 有至少 70%相同性的多核苷酸。  (c) A polynucleotide that is at least 70% identical to (a) or (b).
5、 如权利要求 4所述的多核苷酸,其特征在于所述多核苷酸包含编码具有 SEQ ID NO: 2所示氨基酸序列的多核苷酸。  5. The polynucleotide according to claim 4, wherein the polynucleotide comprises a polynucleotide encoding an amino acid sequence represented by SEQ ID NO: 2.
6、 如权利要求 4所述的多核苷酸,其特征在于所述多核苷酸的序列包含有 SEQ ID NO: 1 中 20- 640位的序列或 SEQ ID NO: 1中 1-707位的序列。  6. The polynucleotide according to claim 4, characterized in that the sequence of the polynucleotide comprises a sequence of positions 20 to 640 in SEQ ID NO: 1 or a sequence of positions 1 to 707 in SEQ ID NO: 1. .
7、 一种含有外源多核苷酸的重组载体, 其特征在于它是由权利要求 4-6 中的 任一权利要求所述多核苷酸与质粒、 病毒或运载体表达载体构建而成的重组载 体。  7. A recombination vector containing an exogenous polynucleotide, characterized in that it is a recombination constructed by the polynucleotide according to any one of claims 4-6 and a plasmid, virus or a carrier expression vector Carrier.
8、 一种含有外源多核苷酸的遗传工程化宿主细胞, 其特征在于它是选自于下 列一种宿主细胞:  8. A genetically engineered host cell containing an exogenous polynucleotide, characterized in that it is selected from one of the following host cells:
(a) 用权利要求 7所述的重组载体转化或转导的宿主细胞; 或  (a) a host cell transformed or transduced with the recombinant vector of claim 7; or
(b) 用权利要求 4- 6中的任一权利要求所述多核苷酸转化或转导的宿主细胞。 (b) a host cell transformed or transduced with a polynucleotide according to any one of claims 4-6.
9、 一种具有人核糖体蛋白 L23 活性的多肽的制备方法, 其特征在于所述方法 包括: 9. A method for preparing a polypeptide having human ribosomal protein L23 activity, characterized in that the method includes:
(a) 在表达人核糖体蛋白 U 3条件下, 培养权利要求 8所述的工程化宿主细胞; (a) culturing the engineered host cell of claim 8 under the condition of expressing human ribosomal protein U3;
(b) 从培养物中分离出具有人核糖体蛋白 L23活性的多肽。 (b) Isolating a polypeptide with human ribosomal protein L23 activity from the culture.
10、 一种能与多肽结合的抗体,其特征在于所述抗体是能与人核糖体蛋白 L23 特异性结合的抗体。 10. An antibody capable of binding to a polypeptide, characterized in that the antibody is capable of binding to human ribosomal protein L23 Specific binding antibody.
11、 一类模拟或调节多肽活性或表达的化合物, 其特征在于它们是模拟、 促进、 拮抗或抑制人核糖体蛋白 L23的活性的化合物。  11. A class of compounds that mimic or regulate the activity or expression of a polypeptide, characterized in that they are compounds that mimic, promote, antagonize or inhibit the activity of human ribosomal protein L23.
12、 如权利要求 11所述的化合物, 其特征在于它是 SEQ ID NO: 1所示的多核苷 酸序列或其片段的反义序列。  12. The compound according to claim 11, characterized in that it is an antisense sequence of a polynucleotide sequence or a fragment thereof as shown in SEQ ID NO: 1.
13、 一种权利要求 11 所述化合物的应用, 其特征在于所述化合物用于调节人 核糖体蛋白 L23在体内、 体外活性的方法。  13. Use of the compound according to claim 11, characterized in that the compound is used for a method for regulating the activity of human ribosomal protein L23 in vivo and in vitro.
14、 一种检测与权利要求 1-3 中的任一权利要求所述多肽相关的疾病或疾病易 感性的方法, 其特征在于其包括检测所述多肽的表达量, 或者检测所述多肽的活 性, 或者检测多核苷酸中引起所述多肽表达量或活性异常的核苷酸变异。  14. A method for detecting a disease or susceptibility to a disease associated with a polypeptide according to any one of claims 1-3, characterized in that it comprises detecting the expression level of the polypeptide, or detecting the activity of the polypeptide Or detecting a nucleotide variation in a polynucleotide that causes abnormal expression or activity of the polypeptide.
15、 如权利要求 1-3 中的任一权利要求所述多肽的应用, 其特征在于它应用于 筛选人核糖体蛋白 L23 的模拟物、 激动剂, 拮抗剂或抑制剂; 或者用于肽指紋图 谱鉴定。  15. Use of a polypeptide according to any one of claims 1-3, characterized in that it is used for screening mimetics, agonists, antagonists or inhibitors of human ribosomal protein L23; or for peptide fingerprinting Atlas identification.
16、 如权利要求 4-6 中的任一权利要求所述的核酸分子的应用, 其特征在于它 作为引物用于核酸扩增反应, 或者作为探针用于杂交反应, 或者用于制造基因芯 片或微阵列。  16. The use of a nucleic acid molecule according to any one of claims 4-6, characterized in that it is used as a primer for a nucleic acid amplification reaction, or as a probe for a hybridization reaction, or for manufacturing a gene chip Or microarray.
17、 如权利要求 1-6 及 11 中的任一权利要求所述的多肽、 多核苷酸或化合物 的应用, 其特征在于用所述多肽、 多核苷酸或其模拟物、 激动剂、 拮抗剂或抑制 剂以安全有效剂量与药学上可接受的载体组成作为诊断或治疗与人核糖体蛋白 L23异常相关的疾病的药物组合物。  17. Use of a polypeptide, polynucleotide or compound according to any one of claims 1-6 and 11, characterized in that the polypeptide, polynucleotide or mimetic, agonist, antagonist is used Or the inhibitor is composed of a safe and effective dose with a pharmaceutically acceptable carrier as a pharmaceutical composition for diagnosing or treating a disease associated with abnormality of human ribosomal protein L23.
18、 权利要求 1-6 及 11 中的任一权利要求所述的多肽、 多核苷酸或化合物的 应用, 其特征在于用所述多肽、 多核苷酸或化合物制备用于治疗如恶性肿瘤, 血 液病, HIV感染和免疫性疾病和各类炎症的药物。  18. Use of a polypeptide, polynucleotide or compound according to any one of claims 1-6 and 11, characterized in that said polypeptide, polynucleotide or compound is used for preparing for treating malignant tumors, blood, etc. Disease, HIV infection and immune diseases and drugs of various inflammations.
PCT/CN2000/000447 1999-11-23 2000-11-20 A new polypeptide-human ribosomal protein l23 and the polynucleotide encoding it WO2001038379A1 (en)

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CN99124084A CN1296975A (en) 1999-11-23 1999-11-23 Polypeptide-human ribosomal protein L23 and polynucleotide for coding said polypeptide

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CN102558333A (en) * 2011-11-21 2012-07-11 西华师范大学 Giant panda ribosomal subunit gene RPL23a recombinant protein and application thereof in preparing anti-cancer drugs
CN102526705B (en) * 2012-02-14 2013-09-25 西华师范大学 Application of human ribosomal protein L23 label peptide in preparation of anti-cancer medicines

Non-Patent Citations (3)

* Cited by examiner, † Cited by third party
Title
DAVYDOVA N.L. ET AL.: "Ribosomal protein L22 from thermus thermophilus: Sequencing, overexpression and crystallisation", FEBS LETT., vol. 369, no. 2-3, 1995, pages 229 - 232 *
DEAK M. ET AL.: "Mitogen- and stress-activated protein kinase-1 (MSK1) is directly activated by MAPK and SAPK2/p38 and may mediate activation of CREB", EMBO J., vol. 17, no. 12, 1998, pages 4426 - 4441 *
UNGE J. ET AL.: "The crystal structure of ribosomal protein L22 from thermus thermophilus: insights into the mechanism of erythromycin resistance", STRUCTURE, vol. 6, no. 12, 1998, pages 1577 - 1586 *

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