WO2001036685A3 - Differential gene expression in cancer - Google Patents

Differential gene expression in cancer Download PDF

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Publication number
WO2001036685A3
WO2001036685A3 PCT/US2000/031809 US0031809W WO0136685A3 WO 2001036685 A3 WO2001036685 A3 WO 2001036685A3 US 0031809 W US0031809 W US 0031809W WO 0136685 A3 WO0136685 A3 WO 0136685A3
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WO
WIPO (PCT)
Prior art keywords
cancer
gene expression
differential gene
methods
glioblastoma
Prior art date
Application number
PCT/US2000/031809
Other languages
French (fr)
Other versions
WO2001036685A2 (en
Inventor
Roger A Kroes
Joseph R Moskal
Hirotaka Yamamoto
Original Assignee
Nyxis Neurotherapies Inc
Roger A Kroes
Joseph R Moskal
Hirotaka Yamamoto
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Nyxis Neurotherapies Inc, Roger A Kroes, Joseph R Moskal, Hirotaka Yamamoto filed Critical Nyxis Neurotherapies Inc
Priority to AU19223/01A priority Critical patent/AU1922301A/en
Publication of WO2001036685A2 publication Critical patent/WO2001036685A2/en
Publication of WO2001036685A3 publication Critical patent/WO2001036685A3/en

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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6809Methods for determination or identification of nucleic acids involving differential detection
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • C12Q1/6886Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/118Prognosis of disease development
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/136Screening for pharmacological compounds

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  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Analytical Chemistry (AREA)
  • Wood Science & Technology (AREA)
  • Immunology (AREA)
  • Genetics & Genomics (AREA)
  • Physics & Mathematics (AREA)
  • Pathology (AREA)
  • Biotechnology (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • General Health & Medical Sciences (AREA)
  • General Engineering & Computer Science (AREA)
  • Biophysics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Oncology (AREA)
  • Hospice & Palliative Care (AREA)
  • Medicines Containing Material From Animals Or Micro-Organisms (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)

Abstract

The invention is directed towards methods for ascertaining gene expression characteristic for cancer, in particular brain cancers such as glioblastoma, and the sequences identified thereby. Compositions, methods and kits encompassing such are provided herein.
PCT/US2000/031809 1999-11-17 2000-11-17 Differential gene expression in cancer WO2001036685A2 (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
AU19223/01A AU1922301A (en) 1999-11-17 2000-11-17 Differential gene expression in cancer

Applications Claiming Priority (4)

Application Number Priority Date Filing Date Title
US16610699P 1999-11-17 1999-11-17
US16605699P 1999-11-17 1999-11-17
US60/166,106 1999-11-17
US60/166,056 1999-11-17

Publications (2)

Publication Number Publication Date
WO2001036685A2 WO2001036685A2 (en) 2001-05-25
WO2001036685A3 true WO2001036685A3 (en) 2002-01-10

Family

ID=26861932

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US2000/031809 WO2001036685A2 (en) 1999-11-17 2000-11-17 Differential gene expression in cancer

Country Status (2)

Country Link
AU (1) AU1922301A (en)
WO (1) WO2001036685A2 (en)

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US10167314B2 (en) 2009-10-05 2019-01-01 Northwestern University Methods of treating depression and other related diseases

Families Citing this family (23)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20030232056A1 (en) 1999-09-10 2003-12-18 Corixa Corporation Compositions and methods for the therapy and diagnosis of ovarian cancer
US6710170B2 (en) 1999-09-10 2004-03-23 Corixa Corporation Compositions and methods for the therapy and diagnosis of ovarian cancer
US20020142957A1 (en) * 2000-08-07 2002-10-03 Hepler William T. Compositions and methods for the therapy and diagnosis of colon cancer
NZ543751A (en) 2003-05-23 2008-05-30 Genentech Inc Compositions and methods for the diagnosis and treatment of tumors of glial origin
CN101336300A (en) * 2005-12-16 2008-12-31 健泰科生物技术公司 Method for diagnosing, prognosing and treating glioma
WO2010033757A1 (en) 2008-09-18 2010-03-25 Naurex, Inc. Nmda receptor modulators and uses thereof
KR101692275B1 (en) 2010-02-11 2017-01-04 노오쓰웨스턴 유니버시티 Secondary structure stabilized nmda receptor modulators and uses thereof
BR112012020142A2 (en) 2010-02-11 2020-08-18 Northwestern University nmda receptor modulators with stabilized secondary structure and their uses.
US8747530B2 (en) 2011-02-15 2014-06-10 Lta Corporation Systems for water extraction from air
KR20150110784A (en) 2013-01-29 2015-10-02 노렉스, 인크. Spiro-lactam nmda receptor modulators and uses thereof
BR112015018087B1 (en) 2013-01-29 2022-09-20 Aptinyx Inc SPIRO-LACTAMA N-METHYL-D-ASPARTATE (NMDA) RECEPTOR MODULATING COMPOUNDS, PHARMACEUTICAL COMPOSITION AND USE THEREOF
JP2016506961A (en) 2013-01-29 2016-03-07 ノーレックス, インコーポレイテッドNaurex, Inc. Spirolactam NMDA receptor modulator and use thereof
EA031905B1 (en) 2013-01-29 2019-03-29 Аптиникс Инк. Spiro-lactam nmda receptor modulators and use thereof
JP6531042B2 (en) 2013-01-29 2019-06-12 アプティニックス インコーポレイテッド Spirolactam NMDA receptor modulators and uses thereof
WO2017201285A1 (en) 2016-05-19 2017-11-23 Aptinyx Inc. Spiro-lactam nmda receptor modulators and uses thereof
CN109415372B (en) 2016-05-19 2021-01-15 阿普廷伊克斯股份有限公司 Spiro-lactam NMDA receptor modulators and uses thereof
ES2972533T3 (en) 2016-08-01 2024-06-13 Tenacia Biotechnology Hong Kong Co Ltd Spirolactam-based NMDA receptor modulators and their uses
KR102462288B1 (en) 2016-08-01 2022-11-01 앱티닉스 인크. Spiro-lactam and bis-spiro-lactam NMDA receptor modulators and uses thereof
CN109937204B (en) 2016-08-01 2022-11-25 阿普廷伊克斯股份有限公司 Spiro-lactam NMDA receptor modulators and uses thereof
ES2973283T3 (en) 2016-08-01 2024-06-19 Tenacia Biotechnology Hong Kong Co Ltd Spirolactam NMDA receptor modulators and uses thereof
SG11201900554YA (en) 2016-08-01 2019-02-27 Aptinyx Inc Spiro-lactam nmda modulators and methods of using same
BR112020015710A2 (en) 2018-01-31 2020-12-08 Aptinyx Inc. SPIRAL-LACTAM MODULATORS OF NMDA RECEPTORS AND USES OF THE SAME
US12012413B2 (en) 2019-11-11 2024-06-18 Tenacia Biotechnology (Hong Kong) Co., Limited Methods of treating painful diabetic peripheral neuropathy

Citations (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1998053319A2 (en) * 1997-05-21 1998-11-26 The Johns Hopkins University Gene expression profiles in normal and cancer cells
US5858712A (en) * 1997-02-06 1999-01-12 Incyte Pharmaceuticals, Inc. CDNA encoding a LEA-motif developmental protein homologous to avian px19
WO1999022243A1 (en) * 1997-10-24 1999-05-06 Human Genome Sciences, Inc. 148 human secreted proteins
WO1999023252A1 (en) * 1997-11-05 1999-05-14 Isis Innovation Limited Cancer gene
WO1999024469A1 (en) * 1997-11-07 1999-05-20 Genetics Institute, Inc. Secreted proteins and polynucleotides encoding them
WO1999053062A2 (en) * 1998-04-16 1999-10-21 Cedars-Sinai Health System, Et Al Isolated sh3 genes associated with myeloproliferative disorders and leukemia, and uses thereof
WO2000028090A2 (en) * 1998-11-12 2000-05-18 Nyxis, Inc. Diagnostic assay for cancer

Patent Citations (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5858712A (en) * 1997-02-06 1999-01-12 Incyte Pharmaceuticals, Inc. CDNA encoding a LEA-motif developmental protein homologous to avian px19
WO1998053319A2 (en) * 1997-05-21 1998-11-26 The Johns Hopkins University Gene expression profiles in normal and cancer cells
WO1999022243A1 (en) * 1997-10-24 1999-05-06 Human Genome Sciences, Inc. 148 human secreted proteins
WO1999023252A1 (en) * 1997-11-05 1999-05-14 Isis Innovation Limited Cancer gene
WO1999024469A1 (en) * 1997-11-07 1999-05-20 Genetics Institute, Inc. Secreted proteins and polynucleotides encoding them
WO1999053062A2 (en) * 1998-04-16 1999-10-21 Cedars-Sinai Health System, Et Al Isolated sh3 genes associated with myeloproliferative disorders and leukemia, and uses thereof
WO2000028090A2 (en) * 1998-11-12 2000-05-18 Nyxis, Inc. Diagnostic assay for cancer

Non-Patent Citations (6)

* Cited by examiner, † Cited by third party
Title
DATABASE EBI [online] EMBL; 12 April 1997 (1997-04-12), STRAUSBERG R. ET AL: "National Cancer Institute, Cancer Genome Anatomy Project (CGAP), Tumor gene index", XP002181163, Database accession no. EM_EST:HS1191117 *
DATABASE EBI [online] EMBL; 27 April 1997 (1997-04-27), ADAMS M.D. ET AL: "Use of a random BAC End Sequence Database for Sequence-Ready Map Building", XP002181161, Database accession no. EM_GSS:AQ005923 *
DATABASE EBI [online] EMBL; 27 July 1999 (1999-07-27), AGOSTINO M.J. ET AL: "SECRETED PROTEINS AND POLYNUCLEOTIDES ENCODING THEM", XP002181162, Database accession no. GSN:AAX60579 *
DATABASE EBI [online] EMBL; 5 January 1998 (1998-01-05), HILLIER ET AL: "WashU-NCI human EST Project", XP002174758, Database accession no. EM_EST:AA705392 *
LAL ANITA ET AL: "A public database for gene expression in human cancers.", CANCER RESEARCH, vol. 59, no. 21, 1 November 1999 (1999-11-01), pages 5403 - 5407, XP002174720, ISSN: 0008-5472 *
YAMAGUCHI FUMIO ET AL: "Differential expression of two fibroblast growth factor-receptor genes is associated with malignant progression in human astrocytomas.", PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES, vol. 91, no. 2, 1994, 1994, pages 484 - 488, XP002141422, ISSN: 0027-8424 *

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US10167314B2 (en) 2009-10-05 2019-01-01 Northwestern University Methods of treating depression and other related diseases

Also Published As

Publication number Publication date
WO2001036685A2 (en) 2001-05-25
AU1922301A (en) 2001-05-30

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