WO2000042838A3 - Molecular profiling for heterosis selection - Google Patents

Molecular profiling for heterosis selection Download PDF

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Publication number
WO2000042838A3
WO2000042838A3 PCT/US2000/001422 US0001422W WO0042838A3 WO 2000042838 A3 WO2000042838 A3 WO 2000042838A3 US 0001422 W US0001422 W US 0001422W WO 0042838 A3 WO0042838 A3 WO 0042838A3
Authority
WO
WIPO (PCT)
Prior art keywords
heterosis
selection
methods
molecular profiling
expression
Prior art date
Application number
PCT/US2000/001422
Other languages
French (fr)
Other versions
WO2000042838A2 (en
Inventor
Ben Bowen
Mei Guo
Oscar Smith
Original Assignee
Pioneer Hi Bred Int
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Pioneer Hi Bred Int filed Critical Pioneer Hi Bred Int
Priority to MXPA01007325A priority Critical patent/MXPA01007325A/en
Priority to CA002358509A priority patent/CA2358509A1/en
Priority to AU26213/00A priority patent/AU2621300A/en
Priority to EP00904457A priority patent/EP1143787A2/en
Publication of WO2000042838A2 publication Critical patent/WO2000042838A2/en
Publication of WO2000042838A3 publication Critical patent/WO2000042838A3/en

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/6895—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for plants, fungi or algae
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6809—Methods for determination or identification of nucleic acids involving differential detection
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/156—Polymorphic or mutational markers
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/158—Expression markers

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Engineering & Computer Science (AREA)
  • Analytical Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Biotechnology (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • Biophysics (AREA)
  • Molecular Biology (AREA)
  • Physics & Mathematics (AREA)
  • Genetics & Genomics (AREA)
  • General Health & Medical Sciences (AREA)
  • Immunology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • Botany (AREA)
  • Mycology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Breeding Of Plants And Reproduction By Means Of Culturing (AREA)

Abstract

Methods of correlating molecular profile information and heterosis are provided. Selection for dominant, additive, or under/overdominant markers provides for improved heterosis. Selection for the number of expression products in an expression profile provides for improved heterosis. Methods of identifying and cloning nucleic acids linked to heterotic traits are provided. Methods of identifying parentage by consideration of expression profiles are provided.
PCT/US2000/001422 1999-01-21 2000-01-19 Molecular profiling for heterosis selection WO2000042838A2 (en)

Priority Applications (4)

Application Number Priority Date Filing Date Title
MXPA01007325A MXPA01007325A (en) 1999-01-21 2000-01-19 Molecular profiling for heterosis selection.
CA002358509A CA2358509A1 (en) 1999-01-21 2000-01-19 Molecular profiling for heterosis selection
AU26213/00A AU2621300A (en) 1999-01-21 2000-01-19 Molecular profiling for heterosis selection
EP00904457A EP1143787A2 (en) 1999-01-21 2000-01-19 Molecular profiling for heterosis selection

Applications Claiming Priority (4)

Application Number Priority Date Filing Date Title
US11661799P 1999-01-21 1999-01-21
US60/116,617 1999-01-21
US16636899P 1999-11-17 1999-11-17
US60/166,368 1999-11-17

Publications (2)

Publication Number Publication Date
WO2000042838A2 WO2000042838A2 (en) 2000-07-27
WO2000042838A3 true WO2000042838A3 (en) 2001-03-29

Family

ID=26814421

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US2000/001422 WO2000042838A2 (en) 1999-01-21 2000-01-19 Molecular profiling for heterosis selection

Country Status (6)

Country Link
EP (1) EP1143787A2 (en)
AU (1) AU2621300A (en)
CA (1) CA2358509A1 (en)
HU (1) HUP0200319A3 (en)
MX (1) MXPA01007325A (en)
WO (1) WO2000042838A2 (en)

Families Citing this family (11)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP1179175A2 (en) * 1999-05-14 2002-02-13 Karolinska Innovations AB Materials and methods relating to disease diagnosis
AU2002364153A1 (en) * 2001-12-11 2003-06-23 Lynx Therapeutics, Inc. Genetic analysis of gene expression in heterosis
WO2005075668A1 (en) * 2004-02-03 2005-08-18 Hybrid Biosciences Pty Ltd Method of identifying genes which promote hybrid vigour and hybrid debility and uses thereof
US20100050281A1 (en) * 2005-07-29 2010-02-25 Peter Hamilton Kay Identification of Genes and Their Products Which Promote Hybrid Vigour or Hybrid Debility and Uses Thereof
GB2436564A (en) * 2006-03-31 2007-10-03 Plant Bioscience Ltd Prediction of heterosis and other traits by transcriptome analysis
WO2007118212A1 (en) * 2006-04-06 2007-10-18 Monsanto Technology Llc Method of predicting a trait of interest
US20080083042A1 (en) * 2006-08-14 2008-04-03 David Butruille Maize polymorphisms and methods of genotyping
ES2381457T3 (en) 2007-12-28 2012-05-28 Pioneer Hi-Bred International Inc. Use of a structural variation to analyze genomic differences for the prediction of heterosis
WO2010041190A1 (en) * 2008-10-06 2010-04-15 Yissum Research Development Company Of The Hebrew University Of Jerusalem Ltd. Induced heterosis related mutations
US9842252B2 (en) 2009-05-29 2017-12-12 Monsanto Technology Llc Systems and methods for use in characterizing agricultural products
GB201110888D0 (en) * 2011-06-28 2011-08-10 Vib Vzw Means and methods for the determination of prediction models associated with a phenotype

Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1984004758A1 (en) * 1983-05-26 1984-12-06 Plant Resources Inst Process for genetic mapping and cross-breeding thereon for plants

Patent Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1984004758A1 (en) * 1983-05-26 1984-12-06 Plant Resources Inst Process for genetic mapping and cross-breeding thereon for plants

Non-Patent Citations (4)

* Cited by examiner, † Cited by third party
Title
GALLAIS A: "Heterosis: its genetic basis and its utilisation in plant breeding", EUPHYTICA, vol. 39, 1988, pages 95 - 104, XP000979609 *
PAULS K P: "Plant biotechnology for crop improvement", BIOTECHNOLOGY ADVANCES,GB,ELSEVIER PUBLISHING, BARKING, vol. 13, no. 4, 1995, pages 673 - 693, XP004044846, ISSN: 0734-9750 *
RUAN Y ET AL.: "Towards Arabidopsis genome analysis: monitoring expression profiles of 1400 genes using cDNA microarrays", THE PLANT JOURNAL, vol. 15, no. 6, 1998, pages 821 - 833, XP000960486 *
TSAFTARIS S A: "Molecular aspects of heterosis in plants", PHYSIOLOGICA PLANTARUM, vol. 94, 1995, pages 362 - 370, XP000980108 *

Also Published As

Publication number Publication date
HUP0200319A3 (en) 2003-12-29
WO2000042838A2 (en) 2000-07-27
HUP0200319A2 (en) 2002-05-29
MXPA01007325A (en) 2002-06-04
AU2621300A (en) 2000-08-07
CA2358509A1 (en) 2000-07-27
EP1143787A2 (en) 2001-10-17

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