WO1999027928A1 - Inhibitors of farnesyl-protein transferase - Google Patents

Inhibitors of farnesyl-protein transferase Download PDF

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Publication number
WO1999027928A1
WO1999027928A1 PCT/US1998/025325 US9825325W WO9927928A1 WO 1999027928 A1 WO1999027928 A1 WO 1999027928A1 US 9825325 W US9825325 W US 9825325W WO 9927928 A1 WO9927928 A1 WO 9927928A1
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Prior art keywords
substituted
unsubstituted
alkyl
aryl
heterocycle
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PCT/US1998/025325
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French (fr)
Inventor
Terrence M. Ciccarone
S. Jane Desolms
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Merck & Co., Inc.
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Priority claimed from GBGB9807364.6A external-priority patent/GB9807364D0/en
Application filed by Merck & Co., Inc. filed Critical Merck & Co., Inc.
Priority to AU16111/99A priority Critical patent/AU1611199A/en
Priority to EP98960530A priority patent/EP1035849A4/en
Priority to CA002311921A priority patent/CA2311921A1/en
Publication of WO1999027928A1 publication Critical patent/WO1999027928A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D471/00Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00
    • C07D471/02Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00 in which the condensed system contains two hetero rings
    • C07D471/04Ortho-condensed systems

Definitions

  • Ras protein is part of a signalling pathway that links cell surface growth factor receptors to nuclear signals initiating cellular proliferation.
  • Biological and biochemical studies of Ras action indicate that Ras functions like a G-regulatory protein.
  • Ras In the inactive state, Ras is bound to GDP.
  • Ras Upon growth factor receptor activation Ras is induced to exchange GDP for GTP and undergoes a conformational change.
  • the GTP-bound form of Ras propagates the growth stimulatory signal until the signal is terminated by the intrinsic GTPase activity of Ras, which returns the protein to its inactive GDP bound form (D.R. Lowy and D.M. Willumsen, Ann. Rev. Biochem. 62:851-891 (1993)).
  • ras genes are found in many human cancers, including colorectal carcinoma, exocrine pancreatic carcinoma, and myeloid leukemias.
  • the protein products of these genes are defective in their GTPase activity and constitutively transmit a growth stimulatory signal.
  • Ras must be localized to the plasma membrane for both normal and oncogenic functions. At least 3 post-translational modifications are involved with Ras membrane localization, and all 3 modifications occur at the C-terminus of Ras.
  • the Ras C-terminus contains a sequence motif termed a "CAAX” or "Cys-Aaa-ZAaa - Xaa” box (Cys is cysteine, Aaa is an aliphatic amino acid, the Xaa is any amino acid) (Willumsen et al, Nature 310:583-586 (1984)).
  • this motif serves as a signal sequence for the enzymes farnesyl-protein transferase or geranylgeranyl-protein transferase, which catalyze the alkylation of the cysteine residue of the CAAX motif with a C15 or C20 isoprenoid, respectively.
  • the Ras protein is one of several proteins that are known to undergo posttranslational famesylation.
  • Other farnesylated proteins include the Ras-related GTP-binding proteins such as Rho, fungal mating factors, the nuclear lamins, and the gamma subunit of transducin.
  • James, et al., J. Biol. Chem. 269, 14182 (1994) have identified a peroxisome associated protein Pxf which is also farnesylated. James, et al., have also suggested that there are farnesylated proteins of unknown structure and function in addition to those listed above.
  • Farnesyl-protein transferase utilizes farnesyl pyrophosphate to covalently modify the Cys thiol group of the Ras CAAX box with a farnesyl group (Reiss et al., Cell, 62:81-88 (1990); Schaber et al, J. Biol. Chem., 265:14701-14704 (1990); Schafer et al., Science, 249:1133-1139 (1990); Manne et al, Proc. Natl. Acad. Sci USA, 87:7541-7545 (1990)).
  • Inhibition of farnesyl pyrophosphate biosynthesis by inhibiting HMG-CoA reductase blocks Ras membrane localization in cultured cells.
  • FPTase farnesyl-protein transferase
  • FPP farnesyl diphosphate
  • Ras protein substrates
  • Such inhibitors may inhibit protein prenylation while serving as alternate substrates for the farnesyl-protein transferase enzyme, or may be purely competitive inhibitors (U.S. Patent 5,141,851, University of Texas; N.E. Kohl et al, Science, 260:1934-1937 (1993); Graham, et al., J. Med. Chem., 37, 725 (1994)).
  • deletion of the thiol from a CAAX derivative has been shown to dramatically reduce the inhibitory potency of the compound.
  • thiol group potentially places limitations on the therapeutic application of FPTase inhibitors with respect to pharmacokinetics, pharmacodynamics and toxicity. Therefore, a functional replacement for the thiol is desirable. It has recently been shown that farnesyl-protein transferase inhibitors are inhibitors of proliferation of vascular smooth muscle cells and are therefore useful in the prevention and therapy of arteriosclerosis and diabetic disturbance of blood vessels (JP H7-112930). It has also recently been disclosed that certain 1,2,3,4-tetrahydroisoquinoline peptidomimetic compounds, some of which incorporate an imidazole moiety, are inhibitors of FPTase (U.S. Pat. No. 5,439,918, EP 0 618 221 A2 and EP 0 675 112 Al ).
  • the present invention comprises non-thiol compounds which inhibit farnesyl-protein transferase. Further contained in this invention are chemotherapeutic compositions containing these farnesyl transferase inhibitors and methods for their production.
  • the compounds of this invention are useful in the inhibition of farnesyl-protein transferase and the famesylation of the oncogene protein Ras.
  • the inhibitors of farnesyl-protein transferase are illustrated by the formula A:
  • Rla, Rib and R ⁇ c are independently selected from: a) hydrogen, b) unsubstituted or substituted aryl, unsubstituted or substituted heterocycle, C3-C10 cycloalkyl, C2-C6 alkenyl, C2-C6 alkynyl, R ⁇ O-, R9S(0) m -, R 8 C(0)NR8-, CN, NO2,
  • R2 is selected from: H; unsubstituted or substituted C ⁇ _8 alkyl, unsubstituted or substituted C2-8 alkenyl, unsubstituted or substituted aryl,
  • aryl or heterocycle unsubstituted or substituted with one or two groups selected from: a) C1-4 alkyl,
  • R ⁇ and R ⁇ b are independently absent or selected from: H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted heteroaryl, unsubstituted or substituted aralkyl and unsubstituted or substituted heteroar alkyl;
  • R4 is independently selected from: a) hydrogen, b) unsubstituted or substituted aryl, unsubstituted or substituted heterocycle, C3-C10 cycloalkyl, C2-C6 alkenyl, C2-C6 alkynyl, perfluoroalkyl, F, Cl, Br, R80-, R9S(0) m -, R8C(O)NR 8 -, CN, NO2, R82N-C(NR8)-, R8C(0)-, R 8 OC(O)-, N3, -N(R8)2, or R9 ⁇ C(O)NR 8 -, and c) Ci-C ⁇ alkyl unsubstituted or substituted by aryl, heterocycle, C3-C10 cycloalkyl, C2-C6 alkenyl, C2-C6 alkynyl, perfluoroalkyl, F, Cl, Br, R 8 O-, R 9 S(O) m -, R8C(0)
  • R5 is independently selected from: a) hydrogen, b) C2-C6 alkenyl, C2-C6 alkynyl, C3-C6 cycloalkyl, perfluoroalkyl, F, Cl, Br, R80-, R 9 S(O) m -, R8C(O)NR 8 -, CN,
  • R 6 , R 7 and R 7a are independently selected from: H; C1-.4 alkyl, C3-6 cycloalkyl, heterocycle, aryl, Ci_4 perfluoroalkyl, unsubstituted or substituted with one or two substituents selected from: a) Ci-4 alkoxy, b) substituted or unsubstituted aryl or substituted or unsubstituted heterocycle, c) halogen, d) HO,
  • R" and R' may be joined in a ring;
  • R 7 and R 7a may be joined in a ring;
  • R8 is independently selected from hydrogen, C1-C6 alkyl, benzyl, 2,2,2- trifluoroethyl and aryl;
  • R9 is independently selected from CyCQ alkyl and aryl
  • RlO is selected from: H; R8C(O)-; R9S(O) m -; unsubstituted or substituted Ci-4 alkyl, unsubstituted or substituted C3.6 cycloalkyl, unsubstituted or substituted heterocycle, unsubstituted or substituted aryl, substituted aroyl, unsubstituted or substituted heteroaroyl, substituted arylsulfonyl, unsubstituted or substituted heteroarylsulfonyl, wherein the substituted group is substituted with one or two substituents selected from: a) Cl-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO, R" e)
  • RU is selected from
  • J and K are independently selected from N, NH or CHy;
  • V is selected from: a) hydrogen, b) heterocycle, c) aryl, d) C1-C20 alkyl wherein from 0 to 4 carbon atoms are replaced with a a heteroatom selected from O, S, and N, and e) C2-C20 alkenyl, provided that V is not hydrogen if A * * * - is S(O) m and V is not hydrogen if A***- is a bond, n is 0 and A*2 is S(O) m ;
  • W is a heterocycle
  • n 0, 1, 2, 3 or 4
  • p 0, 1, 2, 3 or 4
  • q 0, 1, 2, 3 or 4
  • r is 0 to 5, provided that r is 0 when V is hydrogen; s is l or 2; t is 0 or 1; and y is l or 2; the dashed lines represent optional double bonds;
  • Rla and Rlc are independently selected from: hydrogen, C3-C10 cycloalkyl, R8Q-, -N(R8)2, F or Ci-C ⁇ alkyl;
  • R * 3 is independently selected from: a) hydrogen, b) unsubstituted or substituted aryl, unsubstituted or substituted heterocycle, C3-C6 cycloalkyl, R 8 O-, -N(R 8 )2 or C2-C6 alkenyl, c) C1-C6 alkyl unsubstituted or substituted by unsubstituted or substituted aryl, heterocycle, C3-C6 cycloalkyl, C2-C6 alkenyl, R80-, or -N(R 8 ) 2 ;
  • R2 is selected from: a) Cl-8 alkyl, unsubstituted or substituted with one or more of:
  • R ⁇ a and R ⁇ b are independently absent or selected from:
  • R4 is independently selected from: a) hydrogen, b) Ci-C ⁇ alkyl, C2-C6 alkenyl, C2-C6 alkynyl, C1-C6 perfluoroalkyl, F, Cl, R 8 O-, R8C(O)NR 8 -, CN, NO2, (R 8 )2N- C(NR8)-, R ⁇ C(O)-, R8 ⁇ C(O)-, -N(R8)2, or R9 ⁇ C(O)NR8-, and c) C1-C6 alkyl substituted by C1-C6 perfluoroalkyl, R8O-, R8C(O)NR8-, (R8) 2 N-C(NR8)-, R8C(0)-, R 8 OC(O)-, -N(R8)2, or R9OC(O)NR 8 -;
  • R5 is selected from: a) hydrogen, b) C2-C6 alkenyl, C2-C6 alkynyl, C3-C6 cycloalkyl, C1-C6 perfluoroalkyl, F, Cl, R 8 O-, R 9 S(O) m -, R8c(O)NR 8 -, CN, NO2, (R8) 2 N-C(NR8)-, R ⁇ c(O)-, R ⁇ C(O)-, -N(R8)2, or R90C(0)NR 8 -, and c) Cl-C ⁇ alkyl unsubstituted or substituted by Ci-C ⁇ perfluoroalkyl, F, Cl, R80-, R 9 S(O) m -, R8C(O)NR8-, CN,
  • R 6 , R 7 and R 7a are independently selected from: H; Ci-4 alkyl, C3-6 cycloalkyl, aryl, heterocycle, unsubstituted or substituted with: a) Ci-4 alkoxy, b) halogen, or c) substituted or unsubstituted aryl or substituted or unsubstituted heterocycle;
  • R is independently selected from hydrogen, Ci-C ⁇ alkyl, benzyl, 2,2,2- trifluoroethyl and aryl;
  • R9 is independently selected from Ci-C ⁇ alkyl and aryl
  • RlO is selected from: H; R8C(O)-; R9S(O) -; unsubstituted or substituted Ci-4 alkyl, unsubstituted or substituted C3-6 cycloalkyl, unsubstituted or substituted heterocycle, unsubstituted or substituted aryl, substituted aroyl, unsubstituted or substituted heteroaroyl, substituted arylsulfonyl, unsubstituted or substituted heteroarylsulfonyl, wherein the substituted group is substituted with one or two substituents selected from: a) Ci-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO,
  • RU is selected from H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted aralkyl, unsubstituted or substituted heteroaryl and unsubstituted or substituted heteroar alkyl;
  • J and K are independently selected from N or CH y ;
  • V is selected from: a) heterocycle selected from pyrrolidinyl, imidazolinyl, pyridinyl, thiazolyl, oxazolyl, indolyl, quinolinyl, isoquinolinyl, triazolyl and thienyl, and b) aryl;
  • W is a heterocycle selected from pyrrolidinyl, triazolyl, imidazolyl, pyridinyl, thiazolyl, indolyl, quinolinyl, or isoquinolinyl;
  • inhibitors of farnesyl-protein transferase are illustrated by the formula C:
  • Rla and Rlc are independently selected from: hydrogen, C3-C10 cycloalkyl, R80-, -N(R8) 2J F or Cl-C ⁇ alkyl;
  • Rib is independently selected from: a) hydrogen, b) unsubstituted or substituted aryl, unsubstituted or substituted heterocycle, C3-C6 cycloalkyl, R8O-, -N(R 8 )2 or C2-C6 alkenyl, c) Ci-C ⁇ alkyl unsubstituted or substituted by unsubstituted or substituted aryl, heterocycle, C3-C6 cycloalkyl, C2-C6 alkenyl, R 8 O-, or -N(R 8 ) 2 ;
  • R2 is selected from: a) Cl-8 alkyl, unsubstituted or substituted with one or more of: 1) aryl or heterocycle, unsubstituted or substituted with: i) C1-4 alkyl, ii) (CH 2 ) p OR 6 , iii) (CH2) P NR 6 R 7 , iv) halogen, v) Ci-4 perfluoroalkyl,
  • R8a and R ⁇ b are independently absent or selected from: H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted heteroaryl, unsubstituted or substituted aralkyl and unsubstituted or substituted heteroaralkyl;
  • R is independently selected from: a) hydrogen, b) Ci-C ⁇ alkyl, C2-C6 alkenyl, C2-C6 alkynyl, Ci-C ⁇ perfluoroalkyl, F, Cl, R 8 O-, R S C(O)NR8-, CN, NO2, (R 8 )2N- C(NR 8 )-, R ⁇ C(O)-, R 8 OC(O)-, -N(R8) 2J or R9 ⁇ C(O)NR8-, and c) C1-C6 alkyl substituted by Cl-C ⁇ perfluoroalkyl, R 8 O-,
  • R5 is selected from: a) hydrogen, b) C2-C6 alkenyl, C 2 -C6 alkynyl, C3-C6 cycloalkyl, C1-C6 perfluoroalkyl, F, Cl, R80-, R9s(0) m -, R S C(O)NR8-, CN, NO 2 , (R8) 2 N-C(NR8)-, R8c(0)-, R8 ⁇ C(0)-, -N(R8) 2 , or
  • R 6 , R 7 and R 7a are independently selected from:
  • R8 is independently selected from hydrogen, C_-CQ alkyl, benzyl, 2,2,2- trifluoroethyl and aryl;
  • R9 is independently selected from C1-C6 alkyl and aryl
  • RlO is selected from: H; R8C(O)-; R S(O) m -; unsubstituted or substituted Ci-4 alkyl, unsubstituted or substituted C3-6 cycloalkyl, unsubstituted or substituted heterocycle, unsubstituted or substituted aryl, substituted aroyl, unsubstituted or substituted heteroaroyl, substituted arylsulfonyl, unsubstituted or substituted heteroarylsulfonyl, wherein the substituted group is substituted with one or two substituents selected from: a) Ci-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO, R* e)
  • RU is selected from
  • V is selected from: a) heterocycle selected from pyrrolidinyl, imidazolinyl, pyridinyl, thiazolyl, oxazolyl, indolyl, quinolinyl, isoquinolinyl, triazolyl and thienyl; and b) aryl;
  • W is a heterocycle selected from pyrrolidinyl, triazolyl, imidazolyl, pyridinyl, thiazolyl, indolyl, quinolinyl, or isoquinolinyl;
  • n 0, 1 or 2
  • n 0, 1, 2, 3 or 4
  • p is 1, 2 or 3
  • q is 0 or 1
  • r is 0 to 5, provided that r is 0 when V is hydrogen; s is 1 or 2; and t is 1;
  • Rla and Rlc are independently selected from: hydrogen, C3-C10 cycloalkyl, R 8 O-, -N(R8)2, F or Ci-C ⁇ alkyl;
  • Rib is independently selected from: a) hydrogen, b) aryl, heterocycle, C3-C10 cycloalkyl, R 8 O-, -N(R 8 )2, F or C2-
  • CQ alkenyl c) unsubstituted or substituted C1-C6 alkyl wherein the substituent on the substituted C1-C6 alkyl is selected from unsubstituted or substituted aryl, heterocycle, C3-C10 cycloalkyl, C2-C6 alkenyl, R 8 O- and -N(R 8 ) 2 ;
  • R2 is selected from: H; unsubstituted or substituted Cl-8 alkyl, unsubstituted or substituted C2-8 alkenyl, unsubstituted or substituted aryl, unsubstituted or substituted heterocycle, 0 ' 0 and S(O) 2 R 6 , wherein the substituted group is substituted with one or more of:
  • aryl or heterocycle unsubstituted or substituted with one or two groups selected from: a) Ci-4 alkyl, b) (CH 2 )pOR 6 c) (CH 2 ) p NR 6 R 7 , d) halogen, e) Ci-4 perfluoroalkyl,
  • R8a and R ⁇ b are independently absent or selected from:
  • R4 is independently selected from: a) hydrogen, b) aryl, substituted aryl, heterocycle, substituted heterocycle,
  • Ci-Ce alkyl C 2 -C 6 alkenyl, C 2 -C 6 alkynyl, Ci-C 6 perfluoroalkyl, F, Cl, R 8 O-, R 8 C(O)NR8 ⁇ , CN, NO2, (R 8 ) 2 N- C(NR8)-, R8C(O)-, -N(R8)2, or R9 ⁇ C(O)NR8-, and c) C1-C6 alkyl substituted by C1-C6 perfluoroalkyl, R 8 O-, R8C(O)NR8-, (R8)2N-C(NR8)-, R8c(0)-, -N(R8)2, or R90C(0)NR 8 -;
  • R ⁇ and R ⁇ b are independently hydrogen, Ci-C ⁇ alkyl, cyclopropyl, trifluoromethyl and halogen;
  • R 6 , R 7 and R 7 a are independently selected from:
  • R8 is independently selected from hydrogen, C1-C6 alkyl, 2,2,2- trifluoroethyl, benzyl and aryl;
  • R9 is independently selected from C1-C6 alkyl and aryl
  • RlO is selected from: H; R8C(O)-; R S(O) m -; unsubstituted or substituted Ci-4 alkyl, unsubstituted or substituted C3-6 cycloalkyl, unsubstituted or substituted heterocycle, unsubstituted or substituted aryl, substituted aroyl, unsubstituted or substituted heteroaroyl, substituted arylsulfonyl, unsubstituted or substituted heteroarylsulfonyl, wherein the substituted group is substituted with one or two substituents selected from: a) Ci-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO, • > ⁇ o R£
  • RU is selected from
  • J and K are independently selected from N or CHy;
  • V is selected from: a) hydrogen, b) heterocycle selected from pyrrolidinyl, imidazolinyl, pyridinyl, thiazolyl, oxazolyl, indolyl, quinolinyl, isoquinolinyl, triazolyl and thienyl, c) aryl, d) C1-C20 alkyl wherein from 0 to 4 carbon atoms are replaced with a a heteroatom selected from O, S, and N, and e) C2-C20 alkenyl, and provided that V is not hydrogen if Al is S(O) m and V is not hydrogen if Al is a bond, n is 0 and A-2 is S(O) m ; X is a bond, -S(O) m - or -NR 10 -;
  • n 0, 1, 2, 3 or 4
  • p 0, 1, 2, 3 or 4
  • q is 0 or 1
  • r is 0 to 5, provided that r is 0 when V is hydrogen; and y is 1 or 2;
  • Rla and Rlc are independently selected from: hydrogen, C3-C10 cycloalkyl, R8O-, -N(R 8 ) , F or Ci-C ⁇ alkyl;
  • Rib is independently selected from: a) hydrogen, b) aryl, heterocycle, C3-C10 cycloalkyl, R 8 O-, -N(R 8 )2, F or C2-
  • C ⁇ alkenyl c) unsubstituted or substituted Cl-C ⁇ alkyl wherein the substituent on the substituted C1-C6 alkyl is selected from unsubstituted or substituted aryl, heterocycle, C3-C10 cycloalkyl, C2-C6 alkenyl, R 8 O- and -N(R8) 2 ;
  • R2 is selected from: H; unsubstituted or substituted Cl-8 alkyl, unsubstituted or substituted C2-8 alkenyl, unsubstituted or substituted aryl,
  • aryl or heterocycle unsubstituted or substituted with one or two groups selected from: a) C1-4 alkyl,
  • R ⁇ a and R ⁇ b are independently absent or selected from:
  • R4 is independently selected from: a) hydrogen, b) aryl, substituted aryl, heterocycle, substituted heterocycle,
  • R ⁇ a an d R,5b a re independently hydrogen, C1-C6 alkyl, cyclopropyl, trifluoromethyl and halogen;
  • R 6 , R7 and R a are independently selected from:
  • R8 is independently selected from hydrogen, Ci-C ⁇ alkyl, 2,2,2- trifluoroethyl, benzyl and aryl;
  • R is independently selected from C1-C6 alkyl and aryl
  • RlO is selected from: H; R8C(O)-; R9S(O) m -; unsubstituted or substituted Ci-4 alkyl, unsubstituted or substituted C3-6 cycloalkyl, unsubstituted or substituted heterocycle, unsubstituted or substituted aryl, substituted aroyl, unsubstituted or substituted heteroaroyl, substituted arylsulfonyl, unsubstituted or substituted heteroarylsulfonyl, wherein the substituted group is substituted with one or two substituents selected from: a) Ci-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO,
  • RU is selected from
  • V is selected from: a) hydrogen, b) heterocycle selected from pyrrolidinyl, imidazolinyl, pyridinyl, thiazolyl, oxazolyl, indolyl, quinolinyl, isoquinolinyl, triazolyl and thienyl, c) aryl, d) C1-C2O alkyl wherein from 0 to 4 carbon atoms are replaced with a a heteroatom selected from O, S, and N, and e) C 2 -C 2 o alkenyl, and provided that V is not hydrogen if Al is S(O) m and V is not hydrogen if Al is a bond, n is 0 and A 2 is S(O) m ;
  • the inhibitors of farnesyl-protein transferase are illustrated by the formula F:
  • Rla and Rlc are independently selected from: hydrogen, C3-C10 cycloalkyl or Cl-C ⁇ alkyl;
  • R b is independently selected from: a) hydrogen, b) aryl, heterocycle, C3-C10 cycloalkyl, R 8 O-, -N(R 8 )2, F or C 2 - C6 alkenyl, c) C1-C6 alkyl unsubstituted or substituted by aryl, heterocycle, C3-C10 cycloalkyl, C 2 -C ⁇ alkenyl, R 8 O-, or -
  • R 2 is selected from: H; unsubstituted or substituted Cl-8 alkyl,
  • aryl or heterocycle unsubstituted or substituted with one or two groups selected from: a) Ci-4 alkyl, b) (CH 2 ) p OR 6 , c) (CH 2 ) p NR 6 R7, d) halogen, e) Ci- perfluoroalkyl,
  • R8a i s selected from:
  • R4 is independently selected from: a) hydrogen, b) aryl, substituted aryl, heterocycle, substituted heterocycle,
  • Ci-C ⁇ perfluoroalkyl F, Cl, R 8 O-, R8C(O)NR8-, CN, NO 2 , (R 8 ) 2 N- C(NR 8 )-, R8C(O)-, -N(R8) 2 , or R9QC(O)NR 8 -, and c) Ci-C ⁇ alkyl substituted by Ci-C ⁇ perfluoroalkyl, R 8 O-, R8C(O)NR8-, (R8) 2 N-C(NR8)-, R8C(0)-, -N(R 8 ) 2 , or R90C(0)NR 8 -;
  • R ⁇ a and R ⁇ b are independently hydrogen, ethyl, cyclopropyl or methyl
  • R 6 , R7 and R7a a re independently selected from:
  • R is independently selected from hydrogen, Ci-C ⁇ alkyl, 2,2,2- trifluoroethyl, benzyl and aryl;
  • R is independently selected from C1-C6 alkyl and aryl
  • Rl° is selected from: H; R 8 C(O)-; R 9 S(O) m -; unsubstituted or substituted Cl-4 alkyl, wherein the substituted alkyl group is substituted with one or two substituents selected from: a) Cl-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO,
  • RU is selected from
  • Al is selected from: a bond, -C(O)-, O, -N(R 8 )-, or S(O) m ;
  • n is 0 or 1; provided that n is not 0 if Al is a bond, O, -N(R8)-, or
  • the inhibitors of farnesyl-protein transferase are illustrated by the formula G:
  • Rla and Rlc are independently selected from: hydrogen, R8 ⁇ -, -N(R8)2, F, C3-C10 cycloalkyl or Ci-C ⁇ alkyl;
  • Rib is independently selected from: a) hydrogen, b) aryl, heterocycle, C3-C10 cycloalkyl, R 8 O-, -N(R 8 )2, F or C2- CQ alkenyl, c) Cl-C ⁇ alkyl unsubstituted or substituted by aryl, heterocycle, C3-C10 cycloalkyl, C2-C6 alkenyl, R80-, or - N(R8) 2 ;
  • R 2 is selected from: H; unsubstituted or substituted Cl-8 alkyl,
  • R ⁇ a is selected from: H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted heteroaryl, unsubstituted or substituted aralkyl and unsubstituted or substituted heteroaralkyl;
  • R4 is independently selected from: a) hydrogen, b) aryl, substituted aryl, heterocycle, substituted heterocycle, C1-C6 alkyl, C 2 -C6 alkenyl, C 2 -C6 alkynyl, Ci-C ⁇ perfluoroalkyl, F, Cl, R 8 O-, R 8 C(0)NR8-, CN, NO2, (R 8 )2N-
  • R ⁇ and R ⁇ b are independently hydrogen, ethyl, cyclopropyl or methyl
  • R 6 , R7 and R7a are independently selected from:
  • R8 is independently selected from hydrogen, Cl-C ⁇ alkyl, 2,2,2- trifluoroethyl, benzyl and aryl;
  • R9 is independently selected from C1-C6 alkyl and aryl
  • RlO is selected from: H; R8C(O)-; R9S(O) -; unsubstituted or substituted Ci-4 alkyl, wherein the substituted alkyl group is substituted with one or two substituents selected from: a) Cl-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO,
  • RU is selected from H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted aralkyl, unsubstituted or substituted heteroaryl and unsubstituted or substituted heteroaralkyl;
  • the inhibitors of farnesyl-protein transferase are illustrated by the formula H:
  • Rla and Rlc are independently selected from: hydrogen, C3-C10 cycloalkyl or C1-C6 alkyl;
  • Ri is independently selected from: a) hydrogen, b) aryl, heterocycle, C3-C10 cycloalkyl, R 8 O-, -N(R 8 )2 or F, c) C1-C6 alkyl unsubstituted or substituted by aryl, heterocycle, C3-C10 cycloalkyl, R 8 O-, or -N(R 8 )2;
  • R 2 is selected from: H; unsubstituted or substituted Ci-8 alkyl,
  • R3a is selected from: H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted heteroaryl, unsubstituted or substituted aralkyl and unsubstituted or substituted heteroaralkyl;
  • R ⁇ and R ⁇ b are independently hydrogen, ethyl, cyclopropyl or methyl
  • R 6 , R7 and R 7a are independently selected from:
  • R8 is independently selected from hydrogen, C1-C6 alkyl, 2,2,2- trifluoroethyl, benzyl and aryl;
  • R9 is independently selected from Ci-C ⁇ alkyl and aryl
  • RlO is selected from: H; R8C(O)-; R S(O) m -; unsubstituted or substituted Cl-4 alkyl, wherein the substituted alkyl group is substituted with one or two substituents selected from: a) Cl-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO,
  • RU is selected from
  • the inhibitors of farnesyl-protein transferase are illustrated by the formula I:
  • Rla and Rlc are independently selected from: hydrogen, R 8 O-, -N(R 8 )2, F, C3-C10 cycloalkyl or Cl-C ⁇ alkyl;
  • Rib is independently selected from: a) hydrogen, b) aryl, heterocycle or C3-C10 cycloalkyl, c) C1-C6 alkyl unsubstituted or substituted by aryl, heterocycle, C3-C10 cycloalkyl, C2-C6 alkenyl, R 8 O-, or
  • R 2 is selected from: H; unsubstituted or substituted Cl-8 alkyl,
  • R3a i selected from:
  • R ⁇ a and R ⁇ b are independently hydrogen, ethyl, cyclopropyl or methyl
  • R 6 , R 7 and R 7a are independently selected from:
  • R8 is independently selected from hydrogen, Ci-C ⁇ alkyl, 2,2,2- trifluoroethyl, benzyl and aryl;
  • R9 is independently selected from C_-CQ alkyl and aryl
  • RlO is selected from: H; R8C(O)-; R9S(O) m -; unsubstituted or substituted Cl-4 alkyl, wherein the substituted alkyl group is substituted with one or two substituents selected from: a) Ci-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO,
  • RU is selected from
  • Al is selected from: a bond, -C(O)-, O, -N(R 8 )-, or S(0) m ;
  • the compounds of the present invention may have asymmetric centers and occur as racemates, racemic mixtures, and as individual diastereomers, with all possible isomers, including optical isomers, being included in the present invention.
  • any substituent, term, or variable e.g. aryl, heterocycle, Rl a , R etc.
  • its definition on each occurence is independent from the definition at every other occurence.
  • combinations of substituents/or variables are permissible only if such combinations result in stable compounds.
  • alkyl is intended to include both branched and straight-chain saturated aliphatic hydrocarbon groups having the specified number of carbon atoms; “alkoxy” represents an alkyl group of indicated number of carbon atoms attached through an oxygen bridge.
  • Halogen or “halo” as used herein means fluoro, chloro, bromo and iodo.
  • aryl is intended to mean any stable monocyclic, bi cyclic or tri cyclic carbon ring of up to 7 members in each ring, wherein at least one ring is aromatic.
  • monocyclic and bicyclic aryl elements include phenyl, naphthyl, tetrahydronaphthyl, indanyl, biphenyl, phenanthryl, anthryl or acenaphthyl.
  • tricyclic aryl elements examples include 10,ll-dihydro-5H- dibenzo[a,d]cyclohepten-5-yl (which is also known as dibenzylsuberyl), 9-fluorenyl and 9,10-dihydroanthracen-9-yl.
  • aryl is a monocyclic or bicyclic carbon ring.
  • heterocycle or heterocyclic represents a stable 5- to 7-membered monocyclic or stable 8- to 11-membered bicyclic heterocyclic ring or stable 13- to 15-membered tricyclic heterocyclic ring, which is either saturated or unsaturated, and which consists of carbon atoms and from one to four heteroatoms selected from the group consisting of N, O, and S, and including any bicyclic group in which any of the above-defined heterocyclic rings is fused to a benzene ring.
  • the heterocyclic ring may be attached at any heteroatom or carbon atom which results in the creation of a stable structure.
  • Examples of monocyclic and bicyclic heterocyclic elements include, but are not limited to, azepinyl, benzimidazolyl, benzisoxazolyl, benzofurazanyl, benzopyranyl, benzothiopyranyl, benzofuryl, benzothiazolyl, benzothienyl, benzoxazolyl, chromanyl, cinnolinyl, dihydrobenzofuryl, dihydrobenzothienyl, dihydrobenzothiopyranyl, dihydrobenzothiopyranyl sulfone, furyl, imidazolidinyl, imidazolinyl, imidazolyl, indolinyl, indolyl, isochromanyl, isoindolinyl, isoquinolinyl, isothiazolidinyl, isothiazolyl, isothiazolidinyl, morpholinyl, naphthyridinyl,
  • tricyclic heterocyclic elements include, but are not limited to, 6,ll-dihydro-5H- benzo [5 ,6] cyclohepta [ 1 ,2-b] pyridine , 9, 10-dihydro-4H-3-thia- benzo[f]azulen-4-yl and 9-xanthenyl.
  • the 6,ll-dihydro-5H- benzo [5, 6] cyclohepta [1,2-b] pyridine moiety has the following structure:
  • heterocyclic is a monocyclic or bicyclic moiety.
  • heteroaryl is intended to mean any stable monocyclic, bicyclic or tricyclic carbon ring of up to 7 members in each ring, wherein at least one ring is aromatic and wherein from one to four carbon atoms are replaced by heteroatoms selected from the group consisting of N, O, and S.
  • Examples of monocyclic and bicyclic heteroaryl elements include, but are not limited to, benzimidazolyl, benzisoxazolyl, benzofurazanyl, benzopyranyl, benzothiopyranyl, benzofuryl, benzothiazolyl, benzothienyl, benzoxazolyl, chromanyl, cinnolinyl, dihydrobenzofuryl, dihydrobenzothienyl, dihydrobenzothiopyranyl, dihydrobenzothiopyranyl sulfone, furyl, imidazolyl, indolinyl, indolyl, isochromanyl, isoindolinyl, isoquinolinyl, isothiazolyl, naphthyridinyl, oxadiazolyl, pyridyl, pyrazinyl, pyrazolyl, pyridazinyl, pyrimidinyl, pyrroly
  • heteroaryl examples include, but are not limited to, 6,ll-dihydro-5H- benzo[5,6]cyclohepta[l,2-b]pyridine.
  • heteroaryl is a monocyclic or bicyclic moiety.
  • aralkyl is intended to mean an aryl moiety, as defined above, attached through a Ci-Cg alkyl linker, where alkyl is defined above. Examples of aralkyls inlcude, but are not limited to, benzyl and naphthylmethyl.
  • heteroaralkyl is intended to mean a heteroalkyl moiety, as defined above, attached through a Ci-Cg alkyl linker, where alkyl is defined above.
  • heteroaralkyls include, but are not limited to, 2-pyridylmethyl, 2-imidazolylethyl and 2- quinolinylmethyl.
  • substituted alkyl is intended to include the branch or straight-chain alkyl group of 1 to 6 carbon atoms unless otherwise indicated, wherein the carbon atoms may be substituted with F, Cl, Br, CF3, N3, NO , NH 2> oxo, -OH, -0(C ⁇ - C 6 alkyl), S(O) 0 -2- (Cl- C 6 alkyl)S(O) 0 -2-, (Cl- C 6 alkyl)S(O) 0 - 2 (Cl- C 6 alkyl)-, C3-C10 cycloalkyl, C 2 -C ⁇ alkenyl, C 2 -C 6 alkynyl, -C(O)NH, (Cl- C 6 alkyl)C(O)NH-, H2N-C(NH)-, (Cl- C 6 alkyl)C(O)-, -0(Ci-C6 alkyl)
  • substituted aryl As used herein, the terms “substituted aryl”, “substituted heterocycle”, “substituted aralkyl “, “substituted heteroaralkyl “ and “substituted cycloalkyl” are intended to include the cyclic group containing from 1 to 3 substitutents in addition to the point of attachment to the rest of the compound.
  • Such substitutents are preferably selected from the group which includes but is not limited to F, Cl, Br, CF3, NH 2 , N(Ci-C ⁇ alkyl)2, NO2, CN, (Ci-C ⁇ alkyDO-, -OH, (C ⁇ -C 6 alkyl)S(O) m -, (Ci-C ⁇ alkyl)C(0)NH-, H 2 N- C(NH)-, (C1-C6 alkyl)C(O)-, (Ci-C 6 alkyl)OC(O)-, N 3 ,(C ⁇ -C 6 alkyl)OC(O)NH- and C1-C20 alkyl.
  • cyclic amine moieties are formed.
  • examples of such cyclic moieties include, but are not limited to:
  • Such cyclic moieties may optionally include another heteroatom(s).
  • heteroatom-containing cyclic amine moieties include, but are not limited to:
  • Lines drawn into the ring systems from substituents indicate that the indicated bond may be attached to any of the substitutable ring carbon or nitrogen atoms.
  • Rla and Ri are independently selected from: hydrogen, -N(R 8 )2, R 8 C(O)NR 8 - or Ci-C ⁇ alkyl which is unsubstituted or substituted by -N(R8) 2 , R8O- or R8C(O)NR 8 -.
  • R is selected from: a) Cl-8 alkyl, unsubstituted or substituted with one or more of:
  • R2 comprises at least one unsubstituted or substituted phenyl.
  • R4 is selected from: hydrogen, perfluoroalkyl, F, Cl, Br, R 8 O-, R 9 S(O)m-, CN, NO2, R 8 2 N-C(NR 8 )-, R 8 C(O)-, N3, -N(R 8 )2, R9 ⁇ C(O)NR8- and Ci-C ⁇ alkyl.
  • R ⁇ is hydrogen
  • R 7 b is Ci-C ⁇ alkyl substituted with hydrogen or an unsubstituted or substituted aryl group.
  • R8 is selected from H, Ci-C ⁇ alkyl and benzyl.
  • a and A 2 are independently selected from: a bond, -C(O)NR8-, -NR 8 C(O)-, O, -N(R8)-, -S(O)2N(R 8 )- and-N(R8)S(O) 2 -.
  • V is selected from hydrogen, heterocycle and aryl.
  • W is imidazolyl.
  • n, p and r are independently 0, 1, or 2. More preferably, r is 1. Preferably t is 1.
  • the pharmaceutically acceptable salts of the compounds of this invention include the conventional non-toxic salts of the compounds of this invention as formed, e.g., from non-toxic inorganic or organic acids.
  • such conventional non- toxic salts include those derived from inorganic acids such as hydrochloric, hydrobromic, sulfuric, sulfamic, phosphoric, nitric and the like: and the salts prepared from organic acids such as acetic, propionic, succinic, glycolic, stearic, lactic, malic, tartaric, citric, ascorbic, pamoic, maleic, hydroxymaleic, phenylacetic, glutamic, benzoic, salicylic, sulfanilic, 2-acetoxy-benzoic, fumaric, toluenesulfonic, methanesulfonic, ethane disulfonic, oxalic, isethionic, trifluoroacetic and the like.
  • any substituent or variable e.g., Rl a , Z, n, etc.
  • - N(R8)2 represents -NH2, -NHCH3, -NHC2H5, etc.
  • substituents and substitution patterns on the compounds of the instant invention can be selected by one of ordinary skill in the art to provide compounds that are chemically stable and that can be readily synthesized by techniques known in the art, as well as those methods set forth below, from readily available starting materials.
  • the pharmaceutically acceptable salts of the compounds of this invention can be synthesized from the compounds of this invention which contain a basic moiety by conventional chemical methods. Generally, the salts are prepared either by ion exchange chromatography or by reacting the free base with stoichiometric amounts or with an excess of the desired salt-forming inorganic or organic acid in a suitable solvent or various combinations of solvents.
  • the compounds of this invention are prepared by employing reactions as shown in Schemes 1-3, in addition to other standard manipulations such as ester hydrolysis, cleavage of protecting groups, etc., as may be known in the literature or exemplified in the experimental procedures. While stereochemistry is shown in the Schemes, a person of ordinary skill in the art would understand that the illustrated compounds represent racemic mixtures which may be separated at a subsequent purification step or may be utilized as the racemic mixture.
  • R is RU or a protected precursor thereof; and R' is R3a 0 r R3b 0 r protected precursor thereof.
  • the instant compounds are useful as pharmaceutical agents for mammals, especially for humans. These compounds may be administered to patients for use in the treatment of cancer.
  • Examples of the type of cancer which may be treated with the compounds of this invention include, but are not limited to, colorectal carcinoma, exocrine pancreatic carcinoma, myeloid leukemias and neurological tumors. Such tumors may arise by mutations in the ras genes themselves, mutations in the proteins that can regulate Ras activity (i.e., neurofibromin (NF-1), neu, ser, abl, lck, fyn) or by other mechanisms.
  • the compounds of the instant invention inhibit farnesyl- protein transferase and the famesylation of the oncogene protein Ras.
  • the instant compounds may also inhibit tumor angiogenesis, thereby affecting the growth of tumors (J. Rak et al. Cancer Research, 55:4575- 4580 (1995)). Such anti-angiogenesis properties of the instant compounds may also be useful in the treatment of certain forms of blindness related to retinal vascularization.
  • the compounds of this invention are also useful for inhibiting other proliferative diseases, both benign and malignant, wherein Ras proteins are aberrantly activated as a result of oncogenic mutation in other genes (i.e., the Ras gene itself is not activated by mutation to an oncogenic form) with said inhibition being accomplished by the administration of an effective amount of the compounds of the invention to a mammal in need of such treatment.
  • the compounds are useful in the treatment of neurofibromatosis, which is a benign proliferative disorder.
  • the instant compounds may also be useful in the treatment of certain viral infections, in particular in the treatment of hepatitis delta and related viruses (J.S. Glenn et al. Science, 256:1331-1333 (1992).
  • the compounds of the instant invention are also useful in the prevention of restenosis after percutaneous transluminal coronary angioplasty by inhibiting neointimal formation (C. Indolfi et al. Nature medicine, 1:541-545(1995).
  • the instant compounds may also be useful in the treatment and prevention of polycystic kidney disease (D.L. Schaffner et al. American Journal of Pathology, 142:1051-1060 (1993) and B. Cowley, Jr. et al J ⁇ Sf- ⁇ -B Journal, 2:A3160 (1988)).
  • the instant compounds may also be useful for the treatment of fungal infections.
  • the compounds of this instant invention are selective inhibitors of farnesyl- protein transferase.
  • a compound is considered a selective inhibitor of farnesyl-protein transferase, for example, when its in vitro farnesyl- protein transferase inhibitory activity, as assessed by the assay described in Example 2, is at least 100 times greater than the in vitro activity of the same compound against geranylgeranyl-protein transferase-type I in the assay described in Example 3.
  • a selective compound exhibits at least 1000 times greater activity against one of the enzymatic activities when comparing geranylgeranyl-protein transferase-type I inhibition and farnesyl-protein transferase inhibition.
  • the compounds of this instant invention are dual inhibitors of farnesyl- protein transferase and geranylgeranyl-protein transferase type I. Such a dual inhibitor will exhibit certain characteristics when assessed in in vitro assays, which are dependent on the type of assay employed.
  • the dual inhibitor compound has an in vitro inhibitory activity (IC50) that is less than about 12 ⁇ M against K4B-Ras dependent activation of MAP kinases in cells. More preferably, the dual inhibitor compound has an in vitro inhibitory activity (IC50) against K4B-Ras dependent activation of MAP kinases in cells which is more than about 5 times lower than the inhibitory activity (IC50) against Myr-Ras dependent activation of MAP kinases in cells. Also more preferably, in a SEAP assay, the dual inhibitor compound has an inhibitory activity (IC50) that is less than about 10 nM against H-Ras dependent activation of MAP kinases in cells.
  • IC50 in vitro inhibitory activity
  • the dual inhibitor compound has an in vitro inhibitory activity (IC50) that is less than about 5 ⁇ M against transfer of a geranylgeranyl residue to a protein or peptide substrate comprising a CAAXO motif by geranylgeranyl-protein transferase type I in the presence of a modulating anion.
  • IC50 in vitro inhibitory activity
  • the dual inhibitor compound has an in vitro inhibitory activity (IC50) that is less than about 1 ⁇ M against transfer of a geranylgeranyl residue to a protein or peptide substrate comprising a CAAXG motif by geranylgeranyl- protein transferase type I in the presence of a modulating anion.
  • IC50 in vitro inhibitory activity
  • the dual inhibitor compound has an in vitro inhibitory activity (IC50) in the in vitro assay as described in Example 2 that is less than about 1 ⁇ M against transfer of a farnesyl residue to a protein or peptide substrate, comprising a CAAX motif, by farnesyl-protein transferase.
  • the dual inhibitor compound has an in vitro inhibitory activity (IC50) that is less than about lOOnM against transfer of a farnesyl residue to a protein or peptide substrate, comprising a CAAX- motif, by farnesyl-protein transferase. Also preferably, the dual inhibitor compound has an in vitro inhibitory activity (IC50) in the in vitro assay as described in Example 5, that is less than about 100 nM against the anchorage independent growth of H-ras- transformed mammalian fibroblasts.
  • IC50 in vitro inhibitory activity
  • the protein or peptide substrate utilized in the instant assay may incorporate any CAAX motif that is geranylgeranylated by GGTase-
  • CAAX will refer to such motifs that may be geranylgeranylated by GGTase-I. It is understood that some of the
  • G "CAAX " containing protein or peptide substrates may also be farnesylated by farnesyl-protein transferase.
  • farnesyl-protein transferase may also be farnesylated by farnesyl-protein transferase.
  • CAAX motifs include (the corresponding human protein is in parentheses): CVIM (K4B-Ras) SE .ID.NO. 1, CVLL (mutated H-Ras) SEQ.ID.NO. 2, CWM (N-Ras) SEQ.ID.NO. 3, CUM (K4A-Ras) SEQ.ID.NO 4, CLLL (Rap-IA) SEQ.ID.NO. 5, CQLL (Rap-IB) SEQ.ID.NO. 6, CSIM SEQ.ID.NO. 7, CAIM SEQ.ID.NO. 8, CKVL SEQ.ID.NO. 9 and CLIM SEQ.ID.NO. 10 (PFX).
  • the CAAX motif is CVIM SEQ.ID.NO. 1.
  • CAAX is used to designate a protein or peptide substrate that incorporates four amino acid C- terminus motif that is farnesylated by farnesyl-protein transferase. It is
  • CAAX containing protein or peptide substrates may also be geranylgeranylated by GGTase-I.
  • GGTase-I geranylgeranylated by GGTase-I.
  • CAAX motifs include (the corresponding human protein is in parentheses): CVLS (H-ras) SEQ.ID.NO. 11, CVIM (K4B-Ras)
  • the compounds of this invention may be administered to mammals, preferably humans, either alone or, preferably, in combination with pharmaceutically acceptable carriers or diluents, optionally with known adjuvants, such as alum, in a pharmaceutical composition, according to standard pharmaceutical practice.
  • the compounds can be administered orally or parenterally, including the intravenous, intramuscular, intraperitoneal, subcutaneous, rectal and topical routes of administration.
  • the selected compound may be administered, for example, in the form of tablets or capsules, or as an aqueous solution or suspension.
  • carriers which are commonly used include lactose and corn starch, and lubricating agents, such as magnesium stearate, are commonly added.
  • useful diluents include lactose and dried corn starch.
  • aqueous suspensions are required for oral use, the active ingredient is combined with emulsifying and suspending agents. If desired, certain sweetening and/or flavoring agents may be added.
  • sterile solutions of the active ingredient are usually prepared, and the pH of the solutions should be suitably adjusted and buffered.
  • the total concentration of solutes should be controlled in order to render the preparation isotonic.
  • the present invention also encompasses a pharmaceutical composition useful in the treatment of cancer, comprising the administration of a therapeutically effective amount of the compounds of this invention, with or without pharmaceutically acceptable carriers or diluents.
  • suitable compositions of this invention include aqueous solutions comprising compounds of this invention and pharmacolo-gically acceptable carriers, e.g., saline, at a pH level, e.g., 7.4. The solutions may be introduced into a patient's intramuscular blood-stream by local bolus injection.
  • composition is intended to encompass a product comprising the specified ingredients in the specific amounts, as well as any product which results, directly or indirectly, from combination of the specific ingredients in the specified amounts.
  • the daily dosage will normally be determined by the prescribing physician with the dosage generally varying according to the age, weight, and response of the individual patient, as well as the severity of the patient's symptoms.
  • a suitable amount of compound is administered to a mammal undergoing treatment for cancer.
  • Administration occurs in an amount between about 0.1 mg/kg of body weight to about 60 mg/kg of body weight per day, preferably of between 0.5 mg/kg of body weight to about 40 mg/kg of body weight per day.
  • the compounds of the instant invention are also useful as a component in an assay to rapidly determine the presence and quantity of farnesyl-protein transferase (FPTase) in a composition.
  • FPTase farnesyl-protein transferase
  • the composition to be tested may be divided and the two portions contacted with mixtures which comprise a known substrate of FPTase (for example a tetrapeptide having a cysteine at the amine terminus) and farnesyl pyrophosphate and, in one of the mixtures, a compound of the instant invention.
  • the chemical content of the assay mixtures may be determined by well known immunological, radiochemical or chromatographic techniques. Because the compounds of the instant invention are selective inhibitors of FPTase, absence or quantitative reduction of the amount of substrate in the assay mixture without the compound of the instant invention relative to the presence of the unchanged substrate in the assay containing the instant compound is indicative of the presence of FPTase in the composition to be tested.
  • potent inhibitor compounds of the instant invention may be used in an active site titration assay to determine the quantity of enzyme in the sample.
  • a series of samples composed of aliquots of a tissue extract containing an unknown amount of farnesyl-protein transferase, an excess amount of a known substrate of FPTase (for example a tetrapeptide having a cysteine at the amine terminus) and farnesyl pyrophosphate are incubated for an appropriate period of time in the presence of varying concentrations of a compound of the instant invention.
  • concentration of a sufficiently potent inhibitor i.e., one that has a Ki substantially smaller than the concentration of enzyme in the assay vessel
  • concentration of a sufficiently potent inhibitor i.e., one that has a Ki substantially smaller than the concentration of enzyme in the assay vessel
  • Example 1 Example 1 as set forth below.
  • Step A 4-phenyl-6,7-dihydro-4-H-imidazo[4,5]pyridine-l,5,6(S)- tricarboxylic acid 1.5-di-tert-butyl ester
  • Step B 6(S)- ⁇ 2-[3-(4-cyano-benzyl)-3H-imidazol-4yl]ethylcarbamoyl ⁇ -
  • Step C 4-phenyl-4,5,6,7-tetrahydro-lH-imidazo[4,5] pyridine- ⁇ (S)- carboxylic acid ⁇ 2-[3-(4-cyano-benzyl)-3H -imidazol-4-yl]- ethyll-amide
  • Ras-CVLS SEQ.ID.NO. 11, Ras-CVIM SEQ.ID.NO. 1 and Ras-CAIL SEQ.ID.NO. 12 were prepared as described by Schaber et a , J. Biol. Chem. 265:14701-14704 (1990), Pompliano, et aL, Biochemistry 31:3800 (1992) and Gibbs et al., PNAS U.S.A. 86:6630-6634 (1989), respectively.
  • Bovine FPTase was assayed in a volume of 100 ml containing 100 mM N-(2-hydroxy ethyl) piperazine-iV- (2-ethane sulfonic acid) (HEPES), pH 7.4, 5 mM MgCl2, 5 mM dithiothreitol (DTT), 100 mM [ 3 H] -farnesyl diphosphate ([ 3 H]-FPP; 740 CBq/mmol, New England Nuclear), 650 nM Ras-CVLS and 10 mg/ml FPTase at 31°C for 60 min. Reactions were initiated with FPTase and stopped with 1 ml of 1.0 M HCL in ethanol.
  • Precipitates were collected onto filter-mats using a TomTec Mach II cell harvestor, washed with 100% ethanol, dried and counted in an LKB b-plate counter.
  • the assay was linear with respect to both substrates, FPTase levels and time; less than 10% of the [3HJ-FPP was utilized during the reaction period.
  • Purified compounds were dissolved in 100% dimethyl sulfoxide (DMSO) and were diluted 20-fold into the assay. Percentage inhibition is measured by the amount of incorporation of radioactivity in the presence of the test compound when compared to the amount of incorporation in the absence of the test compound.
  • DMSO dimethyl sulfoxide
  • Human FPTase was prepared as described by Omer et aL , Biochemistry 32:5167-5176 (1993). Human FPTase activity was assayed as described above with the exception that 0.1% (w/v) polyethylene glycol 20,000, 10 mM ZnCl2 and 100 nM Ras-CVIM were added to the reaction mixture. Reactions were performed for 30 min., stopped with 100 ml of 30% (v/v) trichloroacetic acid (TCA) in ethanol and processed as described above for the bovine enzyme.
  • TCA trichloroacetic acid
  • the modified geranylgeranyl-protein transferase inhibition assay is carried out at room temperature.
  • a typical reaction contains (in a final volume of 50 mL): [3 H] geranylgeranyl diphosphate, biotinylated
  • Ras peptide 50 mM HEPES, pH 7.5, a modulating anion (for example 10 mM glycerophosphate or 5mM ATP), 5 mM MgCl2, 10 mM ZnCl2, 0.1%
  • the GGTase-type I enzyme employed in the assay is prepared as described in U.S. Pat. No. 5,470,832, incorporated by reference.
  • the Ras peptide is derived from the K4B-Ras protein and has the following sequence: biotinyl-GKKKKKKSKTKCVIM (single amino acid code) (SEQ.ID.NO.: 13).
  • Reactions are initiated by the addition of GGTase and stopped at timed intervals (typically 15 min) by the addition of 200 mL of a 3 mg/mL suspension of streptavidin SPA beads (Scintillation Proximity Assay beads, Amersham) in 0.2 M sodium phosphate, pH 4, containing 50 mM EDTA, and 0.5% BSA. The quenched reactions are allowed to stand for 2 hours before analysis on a Packard TopCount scintillation counter.
  • streptavidin SPA beads Scintillation Proximity Assay beads
  • inhibitors are prepared as concentrated solutions in 100% dimethyl sulfoxide and then diluted 25-fold into the enzyme assay mixture.
  • IC50 values are determined with Ras peptide near JKM concentrations. Enzyme and nonsaturating substrate conditions for inhibitor IC50 determinations are as follows: 75 pM GGTase-I, 1.6 mM Ras peptide, 100 nM geranylgeranyl diphosphate.
  • the cell lines used in this assay consist of either Ratl or NIH3T3 cells transformed by either viral H-ras; an N-ras chimeric gene in which the C-terminal hypervariable region of viral-H-ras was substituted with the corresponding region from the N-ras gene; or ras-CVLL, a viral-H-ras mutant in which the C-terminal exon encodes leucine instead of serine, making the encoded protein a substrate for geranylgeranylation by GGTase-I.
  • the assay can also be performed using cell lines transformed with human H-ras, N-ras or K4B-ras.
  • the assay is performed essentially as described in DeClue, J.E. et al., Cancer Research 51:712-717, (1991). Cells in 10 cm dishes at 50-75% confluency are treated with the test compound(s) (final concentration of solvent, methanol or dimethyl sulfoxide, is 0.1%). After 4 hours at 37°C, the cells are labelled in 3 ml methionine-free DMEM supplemented with 10% regular DMEM, 2% fetal bovine serum, 400 mCi [35 S] methionine (1000 Ci/mmol) and test compound(s).
  • lovastatin a compound that blocks Ras processing in cells by inhibiting the rate-limiting step in the isoprenoid biosynthetic pathway (Hancock, J.F. et al. Cell, 57:1167 (1989); DeClue, J.E. et al. Cancer Res. , 51:712 (1991); Sinensky, M. et al. J. Biol. Chem., 265:19937 (1990)), serve as a positive control in this assay.
  • the cells are lysed in 1 ml lysis buffer (1% NP40/20 mM HEPES, pH 7.5/5 mM MgCl2/lmM DTT/10 mg/ml aprotinen/2 mg/ml leupeptin/2 mg/ml antipain/0.5 mM PMSF) and the lysates cleared by centrifugation at 100,000 x g for 45 min.
  • the media is removed, the cells washed, and 3 ml of media containing the same or a different test compound added. Following an additional 16 hour incubation, the lysis is carried out as above.
  • the immunoprecipitates are washed four times with IP buffer (20 nM HEPES, pH 7.5/1 mM EDTA/1% Triton X-100.0.5% deoxycholate/0.1%/SDS/0.1 M NaCl) boiled in SDS-PAGE sample buffer and loaded on 13% acrylamide gels. When the dye front reached the bottom, the gel is fixed, soaked in Enlightening, dried and autoradiographed. The intensities of the bands corresponding to prenylated and nonprenylated Ras proteins are compared to determine the percent inhibition of prenyl transfer to protein.
  • IP buffer 20 nM HEPES, pH 7.5/1 mM EDTA/1% Triton X-100.0.5% deoxycholate/0.1%/SDS/0.1 M NaCl
  • SALSA Soft Agar-Like Surrogate Assay measures the inhibition of anchorage-independent growth by prenyl-transferase inhibitors. Only transformed cells are able to grow anchorage- independently in the SALSA format. Additionally, cells growing in the SALSA format grow in clumps, resembling the colonies formed in soft agar. SALSA may been used to measure the growth inhibition by prenyl-transferase inhibitors in a variety of transformed cell lines, including Ratl f ⁇ broblasts transformed with viral-H-ras (H-ras/ratl), as well as a panel of human tumor cell lines (HTL's).
  • SALSA is performed in 96-well plates that are coated with a thin film of the polymer, PolyHEMA (Poly(2-hydroxyethyl methacrylate)), which prevents cells from attaching to the plate.
  • Ratl fibroblast cells transformed with v-Ha-ras (this cell line has been deposited in the ATCC on August 19, 1997 under the terms of the Budapest convention and has been given a designation of ATCC CRL 12387) are seeded at 5000 cells/well, grown for 4 hr, then vehicle or half-log dilutions of test compound (in either an 8 or 12 point titration) are added. The cells are then grown for 6 days at 37 degrees, without changing the growth media or adding fresh compound.
  • cell growth is assessed via a colorimetric assay that measures the cleavage of the tetrazolium dye, MTT, to an insoluble purple formazan, a reaction dependent upon mitochondrial dehydrogenases.
  • MTT tetrazolium dye
  • SDS is added to 9% w/v to lyse the cells and solubilize the insoluble MTT-formazan.
  • the amount of MTT metabolism is quantitated via spectrophotometric detection at 570 nM. Dose-inhibition curves and IC ⁇ o's are determined.
  • SEAP reporter plasmid pDSElOO The SEAP reporter plasmid, pDSElOO was constructed by ligating a restriction fragment containing the SEAP coding sequence into the plasmid pCMV-RE-AKI.
  • the SEAP gene is derived from the plasmid pSEAP2-Basic (Clontech, Palo Alto, CA).
  • the plasmid pCMV- RE-AKI was constructed by Deborah Jones (Merck) and contains 5 sequential copies of the 'dyad symmetry response element' cloned upstream of a 'CAT-TATA' sequence derived from the cytomegalovirus immediate early promoter.
  • the plasmid also contains a bovine growth hormone poly- A sequence.
  • the plasmid, pDSElOO was constructed as follows. A restriction fragment encoding the SEAP coding sequence was cut out of the plasmid pSEAP2-Basic using the restriction enzymes EcoRl and Hpal. The ends of the linear DNA fragments were filled in with the Klenow fragment of E. coli DNA Polymerase I. The 'blunt ended' DNA containing the SEAP gene was isolated by electrophoresing the digest in an agarose gel and cutting out the 1694 base pair fragment. The vector plasmid pCMV-RE-AKI was linearized with the restriction enzyme Bgl- II and the ends filled in with Klenow DNA Polymerase I.
  • the SEAP DNA fragment was blunt end ligated into the pCMV-RE-AKI vector and the ligation products were transformed into DH5-alpha E. coli cells (Gibco-BRL). Transformants were screened for the proper insert and then mapped for restriction fragment orientation. Properly oriented recombinant constructs were sequenced across the cloning junctions to verify the correct sequence. The resulting plasmid contains the SEAP coding sequence downstream of the DSE and CAT-TATA promoter elements and upstream of the BGH poly-A sequence.
  • a DNA fragment containing viral-H-r ⁇ s can be PCRed from plasmid "H- 1" (Ellis R. et al. J. Virol. 36, 408, 1980) using the following oligos.
  • Antisense 5'CACATCTAGATCAGGACAGCACAGACTTGCAGC 3'. (SEQ.ID.NO.: 15)
  • the sense strand oligo also optimizes the 'Kozak' translation initiation sequence immediately 5' to the ATG start site.
  • cysteine 186 would be mutated to a serine by substituting a G residue for a C residue in the C-terminal antisense oligo.
  • the PCR primer oligos introduce an Xhol site at the 5' end and a Xbal site at the 3'end.
  • the Xhol-Xbal fragment can be ligated into the mammalian expression plasmid pCI (Promega) cut with Xhol and Xbal. This results in a plasmid in which the recombinant myr- viral-H-ras gene is constitutively transcribed from the CMV promoter of the pCI vector.
  • a viral-H-r ⁇ s clone with a C-terminal sequence encoding the amino acids CVLL can be cloned from the plasmid "H-l" (Ellis R. et al. J. Virol. 36, 408, 1980) by PCR using the following oligos.
  • Antisense strand
  • the sense strand oligo optimizes the 'Kozak' sequence and adds an Xhol site.
  • the antisense strand mutates serine 189 to leucine and adds an Xbal site.
  • the PCR fragment can be trimmed with Xhol and Xbal and ligated into the Xhol-Xbal cut vector pCI (Promega). This results in a plasmid in which the mutated viral-H-r ⁇ s-CVLL gene is constitutively transcribed from the CMV promoter of the pCI vector.
  • the human c-H-r ⁇ s gene can be PCRed from a human cerebral cortex cDNA library (Clontech) using the following oligonucleotide primers.
  • the primers will amplify a c-H-r ⁇ s encoding DNA fragment with the primers contributing an optimized 'Kozak' translation start sequence, an EcoRI site at the N-terminus and a Sal I stite at the C-terminal end.
  • the c- H-ras fragment can be ligated ligated into an EcoRI -Sal I cut mutagenesis vector pAlter-1 (Promega). Mutation of glutamine-61 to a leucine can be accomplished using the manufacturer's protocols and the following oligonucleotide:
  • the mutated c-H-r ⁇ s-Leu61 can be excised from the pAlter-1 vector, using EcoRI and Sal I, and be directly ligated into the vector pCI (Promega) which has been digested with EcoRI and Sal I.
  • the new recombinant plasmid will constitutively transcribe c-H-r ⁇ s-Leu61 from the CMV promoter of the pCI vector.
  • the human c-N-r ⁇ s gene can be PCRed from a human cerebral cortex cDNA library (Clontech) using the following oligonucleotide primers.
  • Antisense strand 5'-GAGAGTCGACTTGTTACATCACCACACATGGC-3' (SEQ.ID.NO.
  • the primers will amplify a c-N-r ⁇ s encoding DNA fragment with the primers contributing an optimized 'Kozak' translation start sequence, an EcoRI site at the N-terminus and a Sal I stite at the C-terminal end.
  • the c- N-ras fragment can be ligated into an EcoRI -Sal I cut mutagenesis vector pAlter-1 (Promega). Mutation of glycine-12 to a valine can be accomplished using the manufacturer's protocols and the following oligonucleotide:
  • the mutated c-N-r ⁇ s-Val-12 can be excised from the pAlter-1 vector, using EcoRI and Sal I, and be directly ligated into the vector pCI
  • the new recombinant plasmid will constitutively transcribe c-N-r ⁇ s-Val-12 from the CMV promoter of the pCI vector.
  • the human c-K-r ⁇ s gene can be PCRed from a human cerebral cortex cDNA library (Clontech) using the following oligonucleotide primers.
  • Antisense strand 5'-CTCTGTCGACGTATTTACATAATTACACACTTTGTC-3' (SEQ.ID.NO.: 25)
  • the primers will amplify a c-K-r ⁇ s encoding DNA fragment with the primers contributing an optimized 'Kozak' translation start sequence, a Kpnl site at the N-terminus and a Sal I stite at the C-terminal end.
  • the c- K-r ⁇ s fragment can be ligated into a Kpnl -Sal I cut mutagenesis vector pAlter-1 (Promega). Mutation of cysteine-12 to a valine can be accomplished using the manufacturer's protocols and the following oligonucleotide :
  • the mutated c-K-r ⁇ s-Val-12 can be excised from the pAlter-1 vector, using Kpnl and Sal I, and be directly ligated into the vector pCI (Promega) which has been digested with Kpnl and Sal I.
  • the new recombinant plasmid will constitutively transcribe c-K-r ⁇ s-Val-12 from the CMV promoter of the pCI vector.
  • Human C33A cells (human epitheial carcenoma - ATTC collection) are seeded in 10cm tissue culture plates in DMEM + 10% fetal calf serum + IX Pen Strep + IX glutamine + IX NEAA. Cells are grown at 37°C in a 5% C02 atmosphere until they reach 50 -80% of conflunecy.
  • transient transfection is performed by the CaP04 method (Sambrook et al., 1989).
  • expression plasmids for H-r ⁇ s, N- ras, K-r ⁇ s, Myr-r ⁇ s or H-r ⁇ s-CVLL are co-precipitated with the DSE- SEAP reporter construct.
  • 600ml of CaCl2 -DNA solution is added dropwise while vortexing to 600ml of 2X HBS buffer to give 1.2ml of precipitate solution (see recipes below). This is allowed to sit at room temperature for 20 to 30 minutes. While the precipitate is forming, the media on the C33A cells is replaced with DMEM (minus phenol red; Gibco cat. # 31053-028)+ 0.5% charcoal stripped calf serum + IX
  • the CaP ⁇ 4-DNA precipitate is added dropwise to the cells and the plate rocked gently to distribute. DNA uptake is allowed to proceed for 5-6 hrs at 37°C under a 5% CO2 atmosphere. Following the DNA incubation period, the cells are washed with PBS and trypsinized with 1ml of 0.05% trypsin. The 1 ml of trypsinized cells is diluted into 10ml of phenol red free DMEM + 0.2% charcoal stripped calf serum + IX (Pen/Strep, Glutamine and NEAA ).
  • Transfected cells are plated in a 96 well microtiter plate (lOOml/well) to which drug, diluted in media, has already been added in a volume of 100ml.
  • the final volume per well is 200ml with each drug concentration repeated in triplicate over a range of half-log steps.
  • Incubation of cells and drugs is for 36 hrs at 37° under C02- At the end of the incubation period, cells are examined microscopically for evidence of cell distress.
  • 100ml of media containing the secreted alkaline phosphatase is removed from each well and transferred to a microtube array for heat treatment at 65°C for 1 hr to inactivate endogenous alkaline phosphatases (but not the heat stable secreted phosphatase).
  • the heat treated media is assayed for alkaline phosphatase by a luminescence assay using the luminescence reagent CSPD® (Tropix, Bedford, Mass.).
  • a volume of 50 ml media is combinRased with 200 ml of CSPD cocktail and incubated for 60 minutes at room temperature. Luminesence is monitored using an ML2200 microplate luminometer (Dynatech). Luminescence reflects the level of activation of the fos reporter construct stimulated by the transiently expressed protein.
  • DNA-CaP ⁇ 4 precipitate for 10cm. plate of cells
  • Rodent fibroblasts transformed with oncogenically mutated human Ha-r ⁇ s or Ki-r ⁇ s (10 cells/animal in 1 ml of DMEM salts) are injected subcutaneously into the left flank of 8-12 week old female nude mice (Harlan) on day 0.
  • the mice in each oncogene group are randomly assigned to a vehicle, compound or combination treatment group.
  • Animals are dosed subcutaneously starting on day 1 and daily for the duration of the experiment.
  • the farnesyl-protein transferase inhibitor may be administered by a continuous infusion pump.
  • Compound, compound combination or vehicle is delivered in a total volume of 0.1 ml. Tumors are excised and weighed when all of the vehicle-treated animals exhibited lesions of 0.5 - 1.0 cm in diameter, typically 11-15 days after the cells were injected. The average weight of the tumors in each treatment group for each cell line is calculated.

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Abstract

The present invention is directed to compounds which inhibit farnesyl-protein transferase (FTase) and the farnesylation of the oncogene protein Ras. The invention is further directed to chemotherapeutic compositions containing the compounds of this invention and methods for inhibiting farnesyl-protein transferase and the farnesylation of the oncogene protein Ras.

Description

TITLE OF THE INVENTION
INHIBITORS OF FARNESYL-PROTEIN TRANSFERASE
BACKGROUND OF THE INVENTION The Ras protein is part of a signalling pathway that links cell surface growth factor receptors to nuclear signals initiating cellular proliferation. Biological and biochemical studies of Ras action indicate that Ras functions like a G-regulatory protein. In the inactive state, Ras is bound to GDP. Upon growth factor receptor activation Ras is induced to exchange GDP for GTP and undergoes a conformational change. The GTP-bound form of Ras propagates the growth stimulatory signal until the signal is terminated by the intrinsic GTPase activity of Ras, which returns the protein to its inactive GDP bound form (D.R. Lowy and D.M. Willumsen, Ann. Rev. Biochem. 62:851-891 (1993)). Mutated ras genes are found in many human cancers, including colorectal carcinoma, exocrine pancreatic carcinoma, and myeloid leukemias. The protein products of these genes are defective in their GTPase activity and constitutively transmit a growth stimulatory signal. Ras must be localized to the plasma membrane for both normal and oncogenic functions. At least 3 post-translational modifications are involved with Ras membrane localization, and all 3 modifications occur at the C-terminus of Ras. The Ras C-terminus contains a sequence motif termed a "CAAX" or "Cys-Aaa-ZAaa - Xaa" box (Cys is cysteine, Aaa is an aliphatic amino acid, the Xaa is any amino acid) (Willumsen et al, Nature 310:583-586 (1984)). Depending on the specific sequence, this motif serves as a signal sequence for the enzymes farnesyl-protein transferase or geranylgeranyl-protein transferase, which catalyze the alkylation of the cysteine residue of the CAAX motif with a C15 or C20 isoprenoid, respectively. (S. Clarke., Ann. Rev. Biochem. 61:355-386 (1992); W.R. Schafer and J. Rine, Ann. Rev. Genetics 30:209-237 (1992)). The Ras protein is one of several proteins that are known to undergo posttranslational famesylation. Other farnesylated proteins include the Ras-related GTP-binding proteins such as Rho, fungal mating factors, the nuclear lamins, and the gamma subunit of transducin. James, et al., J. Biol. Chem. 269, 14182 (1994) have identified a peroxisome associated protein Pxf which is also farnesylated. James, et al., have also suggested that there are farnesylated proteins of unknown structure and function in addition to those listed above.
Inhibition of farnesyl-protein transferase has been shown to block the growth of Ras-transformed cells in soft agar and to modify other aspects of their transformed phenotype. It has also been demonstrated that certain inhibitors of farnesyl-protein transferase selectively block the processing of the Ras oncoprotein intracellularly (N.E. Kohl et al. , Science, 260:1934-1937 (1993) and G.L. James et al., Science, 260:1937-1942 (1993). Recently, it has been shown that an inhibitor of farnesyl-protein transferase blocks the growth of ras- dependent tumors in nude mice (N.E. Kohl et al., Proc. Natl. Acad. Sci U.S.A., 91:9141-9145 (1994) and induces regression of mammary and salivary carcinomas in ras transgenic mice (N.E. Kohl et al. , Nature Medicine, 1:792-797 (1995).
Indirect inhibition of farnesyl-protein transferase in vivo has been demonstrated with lovastatin (Merck & Co., Rahway, NJ) and compactin (Hancock et al., ibid; Casey et al., ibid; Schafer et al., Science 245:379 (1989)). These drugs inhibit HMG-CoA reductase, the rate limiting enzyme for the production of polyisoprenoids including farnesyl pyrophosphate. Farnesyl-protein transferase utilizes farnesyl pyrophosphate to covalently modify the Cys thiol group of the Ras CAAX box with a farnesyl group (Reiss et al., Cell, 62:81-88 (1990); Schaber et al, J. Biol. Chem., 265:14701-14704 (1990); Schafer et al., Science, 249:1133-1139 (1990); Manne et al, Proc. Natl. Acad. Sci USA, 87:7541-7545 (1990)). Inhibition of farnesyl pyrophosphate biosynthesis by inhibiting HMG-CoA reductase blocks Ras membrane localization in cultured cells. However, direct inhibition of farnesyl- protein transferase would be more specific and attended by fewer side effects than would occur with the required dose of a general inhibitor of isoprene biosynthesis. Inhibitors of farnesyl-protein transferase (FPTase) have been described in two general classes. The first are analogs of farnesyl diphosphate (FPP), while the second class of inhibitors is related to the protein substrates (e.g., Ras) for the enzyme. The peptide derived inhibitors that have been described are generally cysteine containing molecules that are related to the CAAX motif that is the signal for protein prenylation. (Schaber et al., ibid; Reiss et. al., ibid; Reiss et al., PNAS, 88:732-736 (1991)). Such inhibitors may inhibit protein prenylation while serving as alternate substrates for the farnesyl-protein transferase enzyme, or may be purely competitive inhibitors (U.S. Patent 5,141,851, University of Texas; N.E. Kohl et al, Science, 260:1934-1937 (1993); Graham, et al., J. Med. Chem., 37, 725 (1994)). In general, deletion of the thiol from a CAAX derivative has been shown to dramatically reduce the inhibitory potency of the compound. However, the thiol group potentially places limitations on the therapeutic application of FPTase inhibitors with respect to pharmacokinetics, pharmacodynamics and toxicity. Therefore, a functional replacement for the thiol is desirable. It has recently been shown that farnesyl-protein transferase inhibitors are inhibitors of proliferation of vascular smooth muscle cells and are therefore useful in the prevention and therapy of arteriosclerosis and diabetic disturbance of blood vessels (JP H7-112930). It has also recently been disclosed that certain 1,2,3,4-tetrahydroisoquinoline peptidomimetic compounds, some of which incorporate an imidazole moiety, are inhibitors of FPTase (U.S. Pat. No. 5,439,918, EP 0 618 221 A2 and EP 0 675 112 Al ).
It is, therefore, an object of this invention to develop novel peptidomimetic compounds that do not have a thiol moiety, and that will inhibit farnesyl-protein transferase and thus, the post- translational famesylation of proteins. It is a further object of this invention to develop chemotherapeutic compositions containing the compounds of this invention and methods for producing the compounds of this invention. SUMMARY OF THE INVENTION
The present invention comprises non-thiol compounds which inhibit farnesyl-protein transferase. Further contained in this invention are chemotherapeutic compositions containing these farnesyl transferase inhibitors and methods for their production.
The compounds of this invention are illustrated by the formula A:
Figure imgf000006_0001
DETAILED DESCRIPTION OF THE INVENTION
The compounds of this invention are useful in the inhibition of farnesyl-protein transferase and the famesylation of the oncogene protein Ras. In a first embodiment of this invention, the inhibitors of farnesyl-protein transferase are illustrated by the formula A:
Figure imgf000006_0002
wherein: Rla, Rib and R^c are independently selected from: a) hydrogen, b) unsubstituted or substituted aryl, unsubstituted or substituted heterocycle, C3-C10 cycloalkyl, C2-C6 alkenyl, C2-C6 alkynyl, R^O-, R9S(0)m-, R8C(0)NR8-, CN, NO2,
(R8)2N-C(NR8)-, R8c(O)-, R8θC(O)-, N3, -N(R8)2, or R9OC(O)NR8-, c) Ci-Cβ alkyl unsubstituted or substituted by unsubstituted or substituted aryl, heterocyclic, C3-C10 cycloalkyl, C2-C6 alkenyl, C2-C6 alkynyl, R8O-, R9s(0)m-, R8C(O)NR8-, CN,
(R8)2N-C(NR8)-, R8C(0)-, R8OC(O)-, N3, -N(R8)2, or R9OC(O)-NR8-;
R2 is selected from: H; unsubstituted or substituted Cι_8 alkyl, unsubstituted or substituted C2-8 alkenyl, unsubstituted or substituted aryl,
Figure imgf000007_0001
unsubstituted or substituted heterocycle, O ' O and
-S(O)2R6, wherein the substituted group is substituted with one or more of:
1) aryl or heterocycle, unsubstituted or substituted with one or two groups selected from: a) C1-4 alkyl,
Figure imgf000007_0002
d) halogen, e) Ci-4 perfluoroalkyl,
2) C3-6 cycloalkyl,
3) OR6,
4) SR6, S(O)R6, SO2R6, 5) — NR6R7
Figure imgf000008_0001
— O^ .NR6R7
8) Y 0
9) — 0. .OR6
Y 0
10) \ ^NR6R7
0
11) — S02-NR6R7
Figure imgf000008_0002
14)
~ 00R6
15) Cl-8 alkyl, or
16) Cl-8 perfluoroalkyl
R^ and R^b are independently absent or selected from: H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted heteroaryl, unsubstituted or substituted aralkyl and unsubstituted or substituted heteroar alkyl;
R4 is independently selected from: a) hydrogen, b) unsubstituted or substituted aryl, unsubstituted or substituted heterocycle, C3-C10 cycloalkyl, C2-C6 alkenyl, C2-C6 alkynyl, perfluoroalkyl, F, Cl, Br, R80-, R9S(0)m-, R8C(O)NR8-, CN, NO2, R82N-C(NR8)-, R8C(0)-, R8OC(O)-, N3, -N(R8)2, or R9θC(O)NR8-, and c) Ci-Cρ alkyl unsubstituted or substituted by aryl, heterocycle, C3-C10 cycloalkyl, C2-C6 alkenyl, C2-C6 alkynyl, perfluoroalkyl, F, Cl, Br, R8O-, R9S(O)m-, R8C(0)NH-, CN, H2N-C(NH)-, R8C(O)-, R8θC(O)-, N3, -N(R8)2, or R8θC(O)NH-;
R5 is independently selected from: a) hydrogen, b) C2-C6 alkenyl, C2-C6 alkynyl, C3-C6 cycloalkyl, perfluoroalkyl, F, Cl, Br, R80-, R9S(O)m-, R8C(O)NR8-, CN,
NO2, (R8)2N-C-(NR8)-, R8C(0)-, R8OC(O)-, N3, -N(R8)2, or R9OC(O)NR8-, and c) C1-C6 alkyl, unsubstituted or substituted by perfluoroalkyl, F, Cl, Br, R80-, R9S(O)m-, R8C(O)NR8-, CN, (R8)2N- C(NR8)-, RβC(O)-, R8OC(O)-, N3, -N(R8)2, or R9OC(O)NR8-;
R6, R7 and R7a are independently selected from: H; C1-.4 alkyl, C3-6 cycloalkyl, heterocycle, aryl, Ci_4 perfluoroalkyl, unsubstituted or substituted with one or two substituents selected from: a) Ci-4 alkoxy, b) substituted or unsubstituted aryl or substituted or unsubstituted heterocycle, c) halogen, d) HO,
Figure imgf000010_0001
g) -S(0)mR9 or
Figure imgf000010_0002
R" and R' may be joined in a ring; R7 and R7a may be joined in a ring;
R8 is independently selected from hydrogen, C1-C6 alkyl, benzyl, 2,2,2- trifluoroethyl and aryl;
R9 is independently selected from CyCQ alkyl and aryl;
RlO is selected from: H; R8C(O)-; R9S(O)m-; unsubstituted or substituted Ci-4 alkyl, unsubstituted or substituted C3.6 cycloalkyl, unsubstituted or substituted heterocycle, unsubstituted or substituted aryl, substituted aroyl, unsubstituted or substituted heteroaroyl, substituted arylsulfonyl, unsubstituted or substituted heteroarylsulfonyl, wherein the substituted group is substituted with one or two substituents selected from: a) Cl-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO, R" e)
0
ORfc f)
O
g) -S(0)mR
Figure imgf000011_0001
i) C3-6 cycloalkyl;
RU is selected from
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted aralkyl, unsubstituted or substituted heteroaryl and unsubstituted or substituted heteroaralkyl;
A***- and A^ are independently selected from: a bond, -CH=CH-, -C≡C-,
-C(O)-, -C(0)NR8-, -NR8C(O)-, O, -N(R8)-, -S(O)2N(R8)-, -
Figure imgf000011_0002
J and K are independently selected from N, NH or CHy;
V is selected from: a) hydrogen, b) heterocycle, c) aryl, d) C1-C20 alkyl wherein from 0 to 4 carbon atoms are replaced with a a heteroatom selected from O, S, and N, and e) C2-C20 alkenyl, provided that V is not hydrogen if A***- is S(O)m and V is not hydrogen if A***- is a bond, n is 0 and A*2 is S(O)m;
W is a heterocycle; X is a bond, -C(=0)NRl°-, -NRl0C(=O)-, -S(O)m-, -NRlO-, O or -C(=0)-;
m is 0, 1 or 2; n is 0, 1, 2, 3 or 4; p is 0, 1, 2, 3 or 4; q is 0, 1, 2, 3 or 4; r is 0 to 5, provided that r is 0 when V is hydrogen; s is l or 2; t is 0 or 1; and y is l or 2; the dashed lines represent optional double bonds;
or an optical isomer or pharmaceutically acceptable salt thereof.
In a further embodiment of this invention, the inhibitors of farnesyl-protein transferase are illustrated by the formula B:
Figure imgf000012_0002
V - A1(CR1 a 2)nA2(CR1 a 2)n
Figure imgf000012_0001
B
wherein:
Rla and Rlc are independently selected from: hydrogen, C3-C10 cycloalkyl, R8Q-, -N(R8)2, F or Ci-Cβ alkyl;
R *3 is independently selected from: a) hydrogen, b) unsubstituted or substituted aryl, unsubstituted or substituted heterocycle, C3-C6 cycloalkyl, R8O-, -N(R8)2 or C2-C6 alkenyl, c) C1-C6 alkyl unsubstituted or substituted by unsubstituted or substituted aryl, heterocycle, C3-C6 cycloalkyl, C2-C6 alkenyl, R80-, or -N(R8)2;
R2 is selected from: a) Cl-8 alkyl, unsubstituted or substituted with one or more of:
1) aryl or heterocycle, unsubstituted or substituted with: i) C1-4 alkyl,
Figure imgf000013_0001
iv) halogen, v) Cl-4 perfluoroalkyl,
2) OR6,
3) SR6, SO2R6, or
4) \ NR6R7
O b)
Figure imgf000013_0002
c) aryl, unsubstituted or substituted with one or more of:
1) Cl-8 alkyl,
2) Cl-8 perfluoroalkyl,
3) OR6,
4) SR6, SO2R6, or
5) \ .NR6R7
O d) -SO2R6;
R^a and R^b are independently absent or selected from:
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted heteroaryl, unsubstituted or substituted aralkyl and unsubstituted or substituted heteroaralkyl;
R4 is independently selected from: a) hydrogen, b) Ci-Cβ alkyl, C2-C6 alkenyl, C2-C6 alkynyl, C1-C6 perfluoroalkyl, F, Cl, R8O-, R8C(O)NR8-, CN, NO2, (R8)2N- C(NR8)-, RδC(O)-, R8θC(O)-, -N(R8)2, or R9θC(O)NR8-, and c) C1-C6 alkyl substituted by C1-C6 perfluoroalkyl, R8O-, R8C(O)NR8-, (R8)2N-C(NR8)-, R8C(0)-, R8OC(O)-, -N(R8)2, or R9OC(O)NR8-;
R5 is selected from: a) hydrogen, b) C2-C6 alkenyl, C2-C6 alkynyl, C3-C6 cycloalkyl, C1-C6 perfluoroalkyl, F, Cl, R8O-, R9S(O)m-, R8c(O)NR8-, CN, NO2, (R8)2N-C(NR8)-, Rβc(O)-, RδθC(O)-, -N(R8)2, or R90C(0)NR8-, and c) Cl-Cβ alkyl unsubstituted or substituted by Ci-Cβ perfluoroalkyl, F, Cl, R80-, R9S(O)m-, R8C(O)NR8-, CN,
(R8)2N-C(NR8)-, R8C(O)-, R8θC(0)-, -N(R8)2, or R90C(0)NR8-;
R6, R7 and R7a are independently selected from: H; Ci-4 alkyl, C3-6 cycloalkyl, aryl, heterocycle, unsubstituted or substituted with: a) Ci-4 alkoxy, b) halogen, or c) substituted or unsubstituted aryl or substituted or unsubstituted heterocycle;
R is independently selected from hydrogen, Ci-Cβ alkyl, benzyl, 2,2,2- trifluoroethyl and aryl;
R9 is independently selected from Ci-Cβ alkyl and aryl;
RlO is selected from: H; R8C(O)-; R9S(O) -; unsubstituted or substituted Ci-4 alkyl, unsubstituted or substituted C3-6 cycloalkyl, unsubstituted or substituted heterocycle, unsubstituted or substituted aryl, substituted aroyl, unsubstituted or substituted heteroaroyl, substituted arylsulfonyl, unsubstituted or substituted heteroarylsulfonyl, wherein the substituted group is substituted with one or two substituents selected from: a) Ci-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO,
R^ e)
O
OR8 f) O g) -S(0)mR9
Figure imgf000015_0001
i) C3-6 cycloalkyl;
RU is selected from H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted aralkyl, unsubstituted or substituted heteroaryl and unsubstituted or substituted heteroar alkyl;
Al and A-2 are independently selected from: a bond, -CH=CH-, -C≡C-, -C(O)-, -C(O)NR8-, O, -N(R8)-, or S(O)m;
J and K are independently selected from N or CHy;
V is selected from: a) heterocycle selected from pyrrolidinyl, imidazolinyl, pyridinyl, thiazolyl, oxazolyl, indolyl, quinolinyl, isoquinolinyl, triazolyl and thienyl, and b) aryl;
W is a heterocycle selected from pyrrolidinyl, triazolyl, imidazolyl, pyridinyl, thiazolyl, indolyl, quinolinyl, or isoquinolinyl;
X is a bond, -C(=O)NRl°-, -NRl°C(=O)-, -S(O)m- or -NRl°-;
Figure imgf000016_0001
n is 0, 1, 2, 3 or 4; p IS 1, 2 or 3; q is O or l; r is 0 to 5, provided that r is 0 when V is hydrogen; s is l or 2; t is 1; and y is l or 2;
the dashed lines represent optional double bonds;
or an optical isomer or pharmaceutically acceptable salt thereof.
In another embodiment of this invention, the inhibitors of farnesyl-protein transferase are illustrated by the formula C:
Figure imgf000017_0001
wherein:
Rla and Rlc are independently selected from: hydrogen, C3-C10 cycloalkyl, R80-, -N(R8)2J F or Cl-Cβ alkyl;
Rib is independently selected from: a) hydrogen, b) unsubstituted or substituted aryl, unsubstituted or substituted heterocycle, C3-C6 cycloalkyl, R8O-, -N(R8)2 or C2-C6 alkenyl, c) Ci-Cρ alkyl unsubstituted or substituted by unsubstituted or substituted aryl, heterocycle, C3-C6 cycloalkyl, C2-C6 alkenyl, R8O-, or -N(R8)2;
R2 is selected from: a) Cl-8 alkyl, unsubstituted or substituted with one or more of: 1) aryl or heterocycle, unsubstituted or substituted with: i) C1-4 alkyl, ii) (CH2)pOR6, iii) (CH2)PNR6R7, iv) halogen, v) Ci-4 perfluoroalkyl,
2) OR6,
3) SR6, SO2R6, or 4) NR6R7
O b)
Figure imgf000018_0001
c) aryl, unsubstituted or substituted with one or more of:
1) Cl-8 alkyl,
2) Cl-8 perfluoroalkyl,
3) OR6,
4) SR6, SO2R6, or
5) \ .NR6R7 o d) -SO2R6;
R8a and R^b are independently absent or selected from: H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted heteroaryl, unsubstituted or substituted aralkyl and unsubstituted or substituted heteroaralkyl;
R is independently selected from: a) hydrogen, b) Ci-Cβ alkyl, C2-C6 alkenyl, C2-C6 alkynyl, Ci-Cβ perfluoroalkyl, F, Cl, R8O-, RSC(O)NR8-, CN, NO2, (R8)2N- C(NR8)-, RδC(O)-, R8OC(O)-, -N(R8)2J or R9θC(O)NR8-, and c) C1-C6 alkyl substituted by Cl-Cβ perfluoroalkyl, R8O-,
R8C(0)NR8-, (R8)2N-C(NR8)-, R8C(0)-, R8OC(O)-, -N(R8)2, or R90C(0)NR8-;
R5 is selected from: a) hydrogen, b) C2-C6 alkenyl, C2-C6 alkynyl, C3-C6 cycloalkyl, C1-C6 perfluoroalkyl, F, Cl, R80-, R9s(0)m-, RSC(O)NR8-, CN, NO2, (R8)2N-C(NR8)-, R8c(0)-, R8θC(0)-, -N(R8)2, or
R9θC(O)NR8-, and c) Ci-Cβ alkyl unsubstituted or substituted by C1-C6 perfluoroalkyl, F, Cl, R80-, R9S(0)m-, R8C(O)NR8-, CN, (R8)2N-C(NR8)-, R8c(0)-, R8OC(O)-, -N(R8)2, or R90C(0)NR8-;
R6, R7 and R7a are independently selected from:
H; Ci-4 alkyl, C3-6 cycloalkyl, aryl, heterocycle, unsubstituted or substituted with: a) Ci-4 alkoxy, b) halogen, or c) substituted or unsubstituted aryl or substituted or unsubstituted heterocycle;
R8 is independently selected from hydrogen, C_-CQ alkyl, benzyl, 2,2,2- trifluoroethyl and aryl;
R9 is independently selected from C1-C6 alkyl and aryl;
RlO is selected from: H; R8C(O)-; R S(O)m-; unsubstituted or substituted Ci-4 alkyl, unsubstituted or substituted C3-6 cycloalkyl, unsubstituted or substituted heterocycle, unsubstituted or substituted aryl, substituted aroyl, unsubstituted or substituted heteroaroyl, substituted arylsulfonyl, unsubstituted or substituted heteroarylsulfonyl, wherein the substituted group is substituted with one or two substituents selected from: a) Ci-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO, R* e)
O
OR£ f)
O
g) S(0)mR
Figure imgf000020_0001
i) C3-6 cycloalkyl;
RU is selected from
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted aralkyl, unsubstituted or substituted heteroaryl and unsubstituted or substituted heteroaralkyl;
Al and A^ are independently selected from: a bond, -CH=CH-, -C≡C-,
-C(O)-, -C(O)NR8-, O, -N(R8)-, or S(O)m;
V is selected from: a) heterocycle selected from pyrrolidinyl, imidazolinyl, pyridinyl, thiazolyl, oxazolyl, indolyl, quinolinyl, isoquinolinyl, triazolyl and thienyl; and b) aryl;
W is a heterocycle selected from pyrrolidinyl, triazolyl, imidazolyl, pyridinyl, thiazolyl, indolyl, quinolinyl, or isoquinolinyl;
X is a bond, -C(=O)NRl°-, -NRl°C(=O)-, -S(O)m- or -NR10-;
m is 0, 1 or 2; n is 0, 1, 2, 3 or 4; p is 1, 2 or 3; q is 0 or 1; r is 0 to 5, provided that r is 0 when V is hydrogen; s is 1 or 2; and t is 1;
the dashed lines represent optional double bonds;
or an optical isomer or pharmaceutically acceptable salt thereof.
In a preferred embodiment of this invention, the inhibitors of farnesyl-protein transferase are illustrated by the formula D:
Figure imgf000021_0001
D
wherein:
Rla and Rlc are independently selected from: hydrogen, C3-C10 cycloalkyl, R8O-, -N(R8)2, F or Ci-Cβ alkyl;
Rib is independently selected from: a) hydrogen, b) aryl, heterocycle, C3-C10 cycloalkyl, R8O-, -N(R8)2, F or C2-
CQ alkenyl, c) unsubstituted or substituted C1-C6 alkyl wherein the substituent on the substituted C1-C6 alkyl is selected from unsubstituted or substituted aryl, heterocycle, C3-C10 cycloalkyl, C2-C6 alkenyl, R8O- and -N(R8)2;
R2 is selected from: H; unsubstituted or substituted Cl-8 alkyl, unsubstituted or substituted C2-8 alkenyl, unsubstituted or substituted aryl,
Figure imgf000022_0001
unsubstituted or substituted heterocycle, 0 ' 0 and S(O)2R6, wherein the substituted group is substituted with one or more of:
1) aryl or heterocycle, unsubstituted or substituted with one or two groups selected from: a) Ci-4 alkyl, b) (CH2)pOR6 c) (CH2)pNR6R7, d) halogen, e) Ci-4 perfluoroalkyl,
2) C3-6 cycloalkyl,
3) OR6, 4) SR6, S(O)R6, SO2R6,
5) — NR6R7
Figure imgf000022_0002
— O^ . NR6R7
8) Y 0
9) — O. .OR6
Y 0
10) \ ^ NR6R7 0
11 ) — S02- NR6R7
Figure imgf000023_0001
15) Cl-8 alkyl, or
16) Cl-8 perfluoroalkyl;
R8a and R^b are independently absent or selected from:
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted heteroaryl, unsubstituted or substituted aralkyl and unsubstituted or substituted heteroaralkyl;
R4 is independently selected from: a) hydrogen, b) aryl, substituted aryl, heterocycle, substituted heterocycle,
Ci-Ce alkyl, C2-C6 alkenyl, C2-C6 alkynyl, Ci-C6 perfluoroalkyl, F, Cl, R8O-, R8C(O)NR8~, CN, NO2, (R8)2N- C(NR8)-, R8C(O)-, -N(R8)2, or R9θC(O)NR8-, and c) C1-C6 alkyl substituted by C1-C6 perfluoroalkyl, R8O-, R8C(O)NR8-, (R8)2N-C(NR8)-, R8c(0)-, -N(R8)2, or R90C(0)NR8-;
R^ and R^b are independently hydrogen, Ci-Cβ alkyl, cyclopropyl, trifluoromethyl and halogen;
R6, R7 and R7 a are independently selected from:
H; Ci-4 alkyl, C3-6 cycloalkyl, aryl, heterocycle, unsubstituted or substituted with: a) Ci-4 alkoxy, b) halogen, or c) substituted or unsubstituted aryl or substituted or unsubstituted heterocycle;
R8 is independently selected from hydrogen, C1-C6 alkyl, 2,2,2- trifluoroethyl, benzyl and aryl;
R9 is independently selected from C1-C6 alkyl and aryl;
RlO is selected from: H; R8C(O)-; R S(O)m-; unsubstituted or substituted Ci-4 alkyl, unsubstituted or substituted C3-6 cycloalkyl, unsubstituted or substituted heterocycle, unsubstituted or substituted aryl, substituted aroyl, unsubstituted or substituted heteroaroyl, substituted arylsulfonyl, unsubstituted or substituted heteroarylsulfonyl, wherein the substituted group is substituted with one or two substituents selected from: a) Ci-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO, > Ύ o
OR* f)
O
g) -S(0)mR
Figure imgf000025_0001
i) C3-6 cycloalkyl;
RU is selected from
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted aralkyl, unsubstituted or substituted heteroaryl and unsubstituted or substituted heteroaralkyl;
Al and A*****' are independently selected from: a bond, -CH=CH-, -C≡C-, -C(O)-, -C(O)NR8-, O, -N(R8)-, or S(O)m;
J and K are independently selected from N or CHy;
V is selected from: a) hydrogen, b) heterocycle selected from pyrrolidinyl, imidazolinyl, pyridinyl, thiazolyl, oxazolyl, indolyl, quinolinyl, isoquinolinyl, triazolyl and thienyl, c) aryl, d) C1-C20 alkyl wherein from 0 to 4 carbon atoms are replaced with a a heteroatom selected from O, S, and N, and e) C2-C20 alkenyl, and provided that V is not hydrogen if Al is S(O)m and V is not hydrogen if Al is a bond, n is 0 and A-2 is S(O)m; X is a bond,
Figure imgf000026_0001
-S(O)m- or -NR10-;
m is 0, 1 or 2; n is 0, 1, 2, 3 or 4; p is 0, 1, 2, 3 or 4; q is 0 or 1; r is 0 to 5, provided that r is 0 when V is hydrogen; and y is 1 or 2;
the dashed lines represent optional double bonds;
or an optical isomer or pharmaceutically acceptable salt thereof.
In a preferred embodiment of this invention, the inhibitors of farnesyl-protein transferase are illustrated by the formula E:
Figure imgf000026_0002
wherein:
Rla and Rlc are independently selected from: hydrogen, C3-C10 cycloalkyl, R8O-, -N(R8) , F or Ci-Cβ alkyl;
Rib is independently selected from: a) hydrogen, b) aryl, heterocycle, C3-C10 cycloalkyl, R8O-, -N(R8)2, F or C2-
Cβ alkenyl, c) unsubstituted or substituted Cl-Cβ alkyl wherein the substituent on the substituted C1-C6 alkyl is selected from unsubstituted or substituted aryl, heterocycle, C3-C10 cycloalkyl, C2-C6 alkenyl, R8O- and -N(R8)2;
R2 is selected from: H; unsubstituted or substituted Cl-8 alkyl, unsubstituted or substituted C2-8 alkenyl, unsubstituted or substituted aryl,
Figure imgf000027_0001
unsubstituted or substituted heterocycle, 0 ' 0 and S(O)2R6 wherein the substituted group is substituted with one or more of:
1) aryl or heterocycle, unsubstituted or substituted with one or two groups selected from: a) C1-4 alkyl,
Figure imgf000027_0002
d) halogen, e) Cl-4 perfluoroalkyl,
2) C3-6 cycloalkyl,
3) OR6, 4) SR6, S(O)R6, SO2R6,
5) — NR6R7
Figure imgf000027_0003
8) "°γNR6R7 o
9)
Y O
Figure imgf000028_0001
11 ) — S02- NR6R7
Figure imgf000028_0002
13) ^ R6
O
Figure imgf000028_0003
15) Ci_8 alkyl, or 16) Cl-8 perfluoroalkyl;
R^a and R^b are independently absent or selected from:
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted heteroaryl, unsubstituted or substituted aralkyl and unsubstituted or substituted heter oar alkyl;
R4 is independently selected from: a) hydrogen, b) aryl, substituted aryl, heterocycle, substituted heterocycle,
Ci-Cβ alkyl, C2-C6 alkenyl, C2-Cβ alkynyl, Cl-C6 perfluoroalkyl, F, Cl, R8O-, R8C(O)NR -, CN, NO2, (R8)2N- C(NR8)-, R8c(0)-, -N(R8)2, or R9θC(O)NR8-, and c) C1-C6 alkyl substituted by C1-C6 perfluoroalkyl, R8O-, R8C(O)NR8-, (R8)2N-C(NR8)-, R8C(0)-, -N(R8)2, or R90C(0)NR8-;
R^a and R,5b are independently hydrogen, C1-C6 alkyl, cyclopropyl, trifluoromethyl and halogen;
R6, R7 and R a are independently selected from:
H; Ci-4 alkyl, C3-6 cycloalkyl, aryl, heterocycle, unsubstituted or substituted with: a) Ci-4 alkoxy, b) halogen, or c) substituted or unsubstituted aryl or substituted or unsubstituted heterocycle;
R8 is independently selected from hydrogen, Ci-Cβ alkyl, 2,2,2- trifluoroethyl, benzyl and aryl;
R is independently selected from C1-C6 alkyl and aryl;
RlO is selected from: H; R8C(O)-; R9S(O)m-; unsubstituted or substituted Ci-4 alkyl, unsubstituted or substituted C3-6 cycloalkyl, unsubstituted or substituted heterocycle, unsubstituted or substituted aryl, substituted aroyl, unsubstituted or substituted heteroaroyl, substituted arylsulfonyl, unsubstituted or substituted heteroarylsulfonyl, wherein the substituted group is substituted with one or two substituents selected from: a) Ci-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO,
Figure imgf000030_0001
V0B» f) 0
g) -S(O)mR9
Figure imgf000030_0002
i) C3-6 cycloalkyl;
RU is selected from
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted aralkyl, unsubstituted or substituted heteroaryl and unsubstituted or substituted heteroaralkyl;
Al and A****** are independently selected from: a bond, -CH=CH-, -C≡C-,
-C(O)-, -C(O)NR8-, O, -N(R8)-, or S(O)m;
V is selected from: a) hydrogen, b) heterocycle selected from pyrrolidinyl, imidazolinyl, pyridinyl, thiazolyl, oxazolyl, indolyl, quinolinyl, isoquinolinyl, triazolyl and thienyl, c) aryl, d) C1-C2O alkyl wherein from 0 to 4 carbon atoms are replaced with a a heteroatom selected from O, S, and N, and e) C2-C2o alkenyl, and provided that V is not hydrogen if Al is S(O)m and V is not hydrogen if Al is a bond, n is 0 and A2 is S(O)m;
X is a bond, -C(=O)NRl0-, -NRl0C(=O)-, -S(0)m- or -NRlO-; m is 0, 1 or 2; n is 0, 1, 2, 3 or 4; p is 0, 1, 2, 3 or 4; q is 0 or 1; and r is 0 to 5, provided that r is 0 when V is hydrogen;
the dashed lines represent optional double bonds;
or an optical isomer or pharmaceutically acceptable salt thereof.
In a preferred embodiment of this invention, the inhibitors of farnesyl-protein transferase are illustrated by the formula F:
1
Figure imgf000031_0001
wherein:
Rla and Rlc are independently selected from: hydrogen, C3-C10 cycloalkyl or Cl-Cβ alkyl;
R b is independently selected from: a) hydrogen, b) aryl, heterocycle, C3-C10 cycloalkyl, R8O-, -N(R8)2, F or C2- C6 alkenyl, c) C1-C6 alkyl unsubstituted or substituted by aryl, heterocycle, C3-C10 cycloalkyl, C2-Cβ alkenyl, R8O-, or -
N(R8)2; R2 is selected from: H; unsubstituted or substituted Cl-8 alkyl,
Figure imgf000032_0001
unsubstituted or substituted aryl, O ' O and -S(O)2R6, wherein the substituted group is substituted with one or more of:
1) aryl or heterocycle, unsubstituted or substituted with one or two groups selected from: a) Ci-4 alkyl, b) (CH2)pOR6, c) (CH2)pNR6R7, d) halogen, e) Ci- perfluoroalkyl,
2) C3-6 cycloalkyl,
3) OR6,
4) SR6, S(O)R6, SO2R6,
NR 6b DR7
5)
Figure imgf000032_0002
— 0^/ NR6R7
8) Y 0
9) — O^/OR6
Y 0
10) \ ^ NR6R7 0
11 ) — S02- NR6R7
Figure imgf000033_0001
13)
R6
0
Figure imgf000033_0002
15) Cl-8 alkyl, or
16) Cl-8 perfluoroalkyl;
R8a is selected from:
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted heteroaryl, unsubstituted or substituted aralkyl and unsubstituted or substituted heteroar alkyl;
R4 is independently selected from: a) hydrogen, b) aryl, substituted aryl, heterocycle, substituted heterocycle,
Cι-C-6 alkyl, C2-Cβ alkenyl, C2-C6 alkynyl, Ci-Cβ perfluoroalkyl, F, Cl, R8O-, R8C(O)NR8-, CN, NO2, (R8)2N- C(NR8)-, R8C(O)-, -N(R8)2, or R9QC(O)NR8-, and c) Ci-Cβ alkyl substituted by Ci-Cβ perfluoroalkyl, R8O-, R8C(O)NR8-, (R8)2N-C(NR8)-, R8C(0)-, -N(R8)2, or R90C(0)NR8-;
R^a and R^b are independently hydrogen, ethyl, cyclopropyl or methyl;
R6, R7 and R7a are independently selected from:
H; Cl-4 alkyl, C3-6 cycloalkyl, aryl, heterocycle, unsubstituted or substituted with: a) Cl-4 alkoxy, b) halogen, or c) substituted or unsubstituted aryl or substituted or unsubstituted heterocycle;
R is independently selected from hydrogen, Ci-Cρ alkyl, 2,2,2- trifluoroethyl, benzyl and aryl;
R is independently selected from C1-C6 alkyl and aryl;
Rl° is selected from: H; R8C(O)-; R9S(O)m-; unsubstituted or substituted Cl-4 alkyl, wherein the substituted alkyl group is substituted with one or two substituents selected from: a) Cl-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO,
R9 e)
O OR8 f)
O g) -S(0)mR9 h) N(R8)2, or i) C3-6 cycloalkyl;
RU is selected from
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted aralkyl, unsubstituted or substituted heteroaryl and unsubstituted or substituted heteroaralkyl;
Al is selected from: a bond, -C(O)-, O, -N(R8)-, or S(O)m;
X is a bond, -C(=O)NRlO-, -NRlOC(=O)-, -S(O)m- or -NR10-;
n is 0 or 1; provided that n is not 0 if Al is a bond, O, -N(R8)-, or
S(O)m; m is 0, 1 or 2; p is 0, 1, 2, 3 or 4; r is 1 or 2; and q is 0 or 1;
or an optical isomer or pharmaceutically acceptable salt thereof.
In a preferred embodiment of this invention, the inhibitors of farnesyl-protein transferase are illustrated by the formula G:
Figure imgf000035_0001
wherein:
Rla and Rlc are independently selected from: hydrogen, R8θ-, -N(R8)2, F, C3-C10 cycloalkyl or Ci-Cβ alkyl;
Rib is independently selected from: a) hydrogen, b) aryl, heterocycle, C3-C10 cycloalkyl, R8O-, -N(R8)2, F or C2- CQ alkenyl, c) Cl-Cβ alkyl unsubstituted or substituted by aryl, heterocycle, C3-C10 cycloalkyl, C2-C6 alkenyl, R80-, or - N(R8)2;
R2 is selected from: H; unsubstituted or substituted Cl-8 alkyl,
Figure imgf000036_0001
unsubstituted or substituted aryl, O ' O and -S(O)2R6, wherein the substituted group is substituted with one or more of:
1) aryl or heterocycle, unsubstituted or substituted with one or two groups selected from: a) Cl-4 alkyl,
Figure imgf000036_0002
d) halogen, e) Cl-4 perfluoroalkyl,
2) C3-6 cycloalkyl, 3) OR6,
4) SR6, S(O)R6, SO2R6,
5) — NR6R7
Figure imgf000037_0001
— O^ .NR6R7
8) Y 0
9) — O^ .OR6
Y 0
10) \ ^NR6R7 0
11) — S02-NR6R7
Figure imgf000037_0002
14)
0
15) Cl-8 alkyl, or
16) Ci-8 perfluoroalkyl;
R^a is selected from: H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted heteroaryl, unsubstituted or substituted aralkyl and unsubstituted or substituted heteroaralkyl;
R4 is independently selected from: a) hydrogen, b) aryl, substituted aryl, heterocycle, substituted heterocycle, C1-C6 alkyl, C2-C6 alkenyl, C2-C6 alkynyl, Ci-Cβ perfluoroalkyl, F, Cl, R8O-, R8C(0)NR8-, CN, NO2, (R8)2N-
C(NR8)-, R8c(0)-, -N(R8)2, or R9θC(O)NR8-, and c) C1-C6 alkyl substituted by Ci-Cβ perfluoroalkyl, R8O-, R8C(O)NR8-, (R8)2N-C(NR8)-, R8c(0)-, -N(R8)2, or R90C(0)NR8-;
R^ and R^b are independently hydrogen, ethyl, cyclopropyl or methyl;
R6, R7 and R7a are independently selected from:
H; Cl-4 alkyl, C3-6 cycloalkyl, aryl, heterocycle, unsubstituted or substituted with: a) Cl-4 alkoxy, b) halogen, or c) substituted or unsubstituted aryl or substituted or unsubstituted heterocycle;
R8 is independently selected from hydrogen, Cl-Cβ alkyl, 2,2,2- trifluoroethyl, benzyl and aryl;
R9 is independently selected from C1-C6 alkyl and aryl;
RlO is selected from: H; R8C(O)-; R9S(O) -; unsubstituted or substituted Ci-4 alkyl, wherein the substituted alkyl group is substituted with one or two substituents selected from: a) Cl-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO,
Figure imgf000039_0001
9) -S(0)mR9
Figure imgf000039_0002
i) C3-6 cycloalkyl;
RU is selected from H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted aralkyl, unsubstituted or substituted heteroaryl and unsubstituted or substituted heteroaralkyl; X is a bond, -C(=0)NR10-, -NRl0C(=O)-, -S(O)m- or -NRlO-;
n is O or l; m is 0, 1 or 2; p is 0, 1, 2, 3 or 4, provided that p is not 0 if X is a bond, -NR8- or
0; q is 0 or 1; and r is l or 2; or an optical isomer or pharmaceutically acceptable salt thereof.
In a preferred embodiment of this invention, the inhibitors of farnesyl-protein transferase are illustrated by the formula H:
Figure imgf000040_0001
wherein:
Rla and Rlc are independently selected from: hydrogen, C3-C10 cycloalkyl or C1-C6 alkyl;
Ri is independently selected from: a) hydrogen, b) aryl, heterocycle, C3-C10 cycloalkyl, R8O-, -N(R8)2 or F, c) C1-C6 alkyl unsubstituted or substituted by aryl, heterocycle, C3-C10 cycloalkyl, R8O-, or -N(R8)2;
R2 is selected from: H; unsubstituted or substituted Ci-8 alkyl,
Figure imgf000040_0002
unsubstituted or substituted aryl, O ' O and -S(O)2R6, wherein the substituted group is substituted with one or more of:
1) aryl or heterocycle, unsubstituted or substituted with one or two groups selected from: a) Cl-4 alkyl,
Figure imgf000040_0003
d) halogen, e) Cl-4 perfluoroalkyl,
2) C3-6 cycloalkyl,
3) OR6, 4) SR6, S(O)R6, SO2R6, 5) — NR6R7
Figure imgf000041_0001
— O^ .NR6R7
8) Y 0
9) — 0. .OR6
Y 0
10) \ .NR6R7
0
11) — SO2-NR6R7
Figure imgf000041_0002
13)
-r 0 R6
14)
ΆΓOR6
0
15) Cl-8 alkyl, or
16) Cl-8 perfluoroalkyl;
R3a is selected from: H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted heteroaryl, unsubstituted or substituted aralkyl and unsubstituted or substituted heteroaralkyl;
R^ and R^b are independently hydrogen, ethyl, cyclopropyl or methyl;
R6, R7 and R7a are independently selected from:
H; Cl-4 alkyl, C3-6 cycloalkyl, aryl, heterocycle, unsubstituted or substituted with: a) Ci-4 alkoxy, b) halogen, or c) substituted or unsubstituted aryl or substituted or unsubstituted heterocycle;
R8 is independently selected from hydrogen, C1-C6 alkyl, 2,2,2- trifluoroethyl, benzyl and aryl;
R9 is independently selected from Ci-Cβ alkyl and aryl;
RlO is selected from: H; R8C(O)-; R S(O)m-; unsubstituted or substituted Cl-4 alkyl, wherein the substituted alkyl group is substituted with one or two substituents selected from: a) Cl-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO,
R* e)
O
OR8 f) O g) ~S(0)mR9
Figure imgf000043_0001
i) C3-6 cycloalkyl;
RU is selected from
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted aralkyl, unsubstituted or substituted heteroaryl and unsubstituted or substituted heteroar alkyl;
X is a bond, -C(=O)NRlO-, -NRl°C(=O)-, -S(O)m- or -NRlO-
m is 0, 1 or 2; p is 0, 1, 2, 3 or 4; q is 0 or 1; and
or an optical isomer or pharmaceutically acceptable salt thereof.
In a preferred embodiment of this invention, the inhibitors of farnesyl-protein transferase are illustrated by the formula I:
Figure imgf000043_0002
wherein:
Rla and Rlc are independently selected from: hydrogen, R8O-, -N(R8)2, F, C3-C10 cycloalkyl or Cl-Cβ alkyl; Rib is independently selected from: a) hydrogen, b) aryl, heterocycle or C3-C10 cycloalkyl, c) C1-C6 alkyl unsubstituted or substituted by aryl, heterocycle, C3-C10 cycloalkyl, C2-C6 alkenyl, R8O-, or
Figure imgf000044_0001
R2 is selected from: H; unsubstituted or substituted Cl-8 alkyl,
Figure imgf000044_0002
unsubstituted or substituted aryl, O ' O and -S(O)2R6, wherein the substituted group is substituted with one or more of:
1) aryl or heterocycle, unsubstituted or substituted with one or two groups selected from: a) Cl-4 alkyl, b) (CH2)pOR6, c) (CH2)PNR6R7, d) halogen, e) Cl-4 perfluoroalkyl,
2) C3-6 cycloalkyl, 3) OR6,
4) SR6, S(O)R6, SO2R6,
6D7
5) NR°R
Figure imgf000044_0003
~ O^ . NR6R7
8) Y O
9) — O^/OR6
Y 0
10) \ . NR6R7 0
11 ) — S02- NR6R7
Figure imgf000045_0001
13)
-r 0 R6
14)
^ 0R6
0
15) Cl-8 alkyl, or
16) Cl-8 perfluoroalkyl;
R3a i selected from:
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted heteroaryl, unsubstituted or substituted aralkyl and unsubstituted or substituted heteroar alkyl;
R^a and R^b are independently hydrogen, ethyl, cyclopropyl or methyl;
R6, R7 and R7a are independently selected from:
H; Cl-4 alkyl, C3_6 cycloalkyl, aryl, heterocycle, unsubstituted or substituted with: a) Cl-4 alkoxy, b) halogen, or c) substituted or unsubstituted aryl or substituted or unsubstituted heterocycle;
R8 is independently selected from hydrogen, Ci-Cβ alkyl, 2,2,2- trifluoroethyl, benzyl and aryl;
R9 is independently selected from C_-CQ alkyl and aryl;
RlO is selected from: H; R8C(O)-; R9S(O)m-; unsubstituted or substituted Cl-4 alkyl, wherein the substituted alkyl group is substituted with one or two substituents selected from: a) Ci-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO,
Figure imgf000046_0001
g) -S(O)mR9
Figure imgf000046_0002
i) C3-6 cycloalkyl;
RU is selected from
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted aralkyl, unsubstituted or substituted heteroaryl and unsubstituted or substituted heteroaralkyl; Al is selected from: a bond, -C(O)-, O, -N(R8)-, or S(0)m;
X is a bond, -C(=O)NRl0-, -NR10C(=O)-, -S(O)m- or -NRl°-;
m is 0, 1 or 2; n is O or 1; p is 1, 2 or 3; and q is O or l;
or an optical isomer or pharmaceutically acceptable salt thereof.
Specific examples of the compounds of the invention are:
Figure imgf000047_0001
4-phenyl-4,5,6,7-tetrahydro-lH-imidazo[4,5] pyridine-6(S)-carboxylic acid {2-[3-(4-cyano-benzyl)-3H -imidazol-4-yι]-ethyl}-amide;
or an optical isomer or a pharmaceutically acceptable salt thereof.
The compounds of the present invention may have asymmetric centers and occur as racemates, racemic mixtures, and as individual diastereomers, with all possible isomers, including optical isomers, being included in the present invention. When any substituent, term, or variable (e.g. aryl, heterocycle, Rla, R etc.) occurs more than one time in any formula or generic structure its definition on each occurence is independent from the definition at every other occurence. Also, combinations of substituents/or variables are permissible only if such combinations result in stable compounds.
As used herein, "alkyl" is intended to include both branched and straight-chain saturated aliphatic hydrocarbon groups having the specified number of carbon atoms; "alkoxy" represents an alkyl group of indicated number of carbon atoms attached through an oxygen bridge. "Halogen" or "halo" as used herein means fluoro, chloro, bromo and iodo.
As used herein, "aryl" is intended to mean any stable monocyclic, bi cyclic or tri cyclic carbon ring of up to 7 members in each ring, wherein at least one ring is aromatic. Examples of monocyclic and bicyclic aryl elements include phenyl, naphthyl, tetrahydronaphthyl, indanyl, biphenyl, phenanthryl, anthryl or acenaphthyl. Examples of tricyclic aryl elements include 10,ll-dihydro-5H- dibenzo[a,d]cyclohepten-5-yl (which is also known as dibenzylsuberyl), 9-fluorenyl and 9,10-dihydroanthracen-9-yl. Preferably, "aryl" is a monocyclic or bicyclic carbon ring.
The term heterocycle or heterocyclic, as used herein, represents a stable 5- to 7-membered monocyclic or stable 8- to 11-membered bicyclic heterocyclic ring or stable 13- to 15-membered tricyclic heterocyclic ring, which is either saturated or unsaturated, and which consists of carbon atoms and from one to four heteroatoms selected from the group consisting of N, O, and S, and including any bicyclic group in which any of the above-defined heterocyclic rings is fused to a benzene ring. The heterocyclic ring may be attached at any heteroatom or carbon atom which results in the creation of a stable structure. Examples of monocyclic and bicyclic heterocyclic elements include, but are not limited to, azepinyl, benzimidazolyl, benzisoxazolyl, benzofurazanyl, benzopyranyl, benzothiopyranyl, benzofuryl, benzothiazolyl, benzothienyl, benzoxazolyl, chromanyl, cinnolinyl, dihydrobenzofuryl, dihydrobenzothienyl, dihydrobenzothiopyranyl, dihydrobenzothiopyranyl sulfone, furyl, imidazolidinyl, imidazolinyl, imidazolyl, indolinyl, indolyl, isochromanyl, isoindolinyl, isoquinolinyl, isothiazolidinyl, isothiazolyl, isothiazolidinyl, morpholinyl, naphthyridinyl, oxadiazolyl, 2-oxoazepinyl, 2-oxopyrrolidinyl, pyridyl, pyrazinyl, pyrazolidinyl, pyrazolyl, pyridazinyl, pyrimidinyl, pyrrolidinyl, pyrrolyl, quinazolinyl, quinolinyl, quinoxalinyl, tetrahydrofuryl, tetrahydroisoquinolinyl, tetrahydroquinolinyl, thiamorpholinyl, thiamorpholinyl sulfoxide, thiazolyl, thiazolinyl, thienofuryl, thienothienyl, and thienyl. Examples of tricyclic heterocyclic elements include, but are not limited to, 6,ll-dihydro-5H- benzo [5 ,6] cyclohepta [ 1 ,2-b] pyridine , 9, 10-dihydro-4H-3-thia- benzo[f]azulen-4-yl and 9-xanthenyl. The 6,ll-dihydro-5H- benzo [5, 6] cyclohepta [1,2-b] pyridine moiety has the following structure:
Figure imgf000049_0001
Preferably, "heterocyclic" is a monocyclic or bicyclic moiety.
As used herein, "heteroaryl" is intended to mean any stable monocyclic, bicyclic or tricyclic carbon ring of up to 7 members in each ring, wherein at least one ring is aromatic and wherein from one to four carbon atoms are replaced by heteroatoms selected from the group consisting of N, O, and S. Examples of monocyclic and bicyclic heteroaryl elements include, but are not limited to, benzimidazolyl, benzisoxazolyl, benzofurazanyl, benzopyranyl, benzothiopyranyl, benzofuryl, benzothiazolyl, benzothienyl, benzoxazolyl, chromanyl, cinnolinyl, dihydrobenzofuryl, dihydrobenzothienyl, dihydrobenzothiopyranyl, dihydrobenzothiopyranyl sulfone, furyl, imidazolyl, indolinyl, indolyl, isochromanyl, isoindolinyl, isoquinolinyl, isothiazolyl, naphthyridinyl, oxadiazolyl, pyridyl, pyrazinyl, pyrazolyl, pyridazinyl, pyrimidinyl, pyrrolyl, quinazolinyl, quinolinyl, quinoxalinyl, tetrahydroisoquinolinyl, tetrahydroquinolinyl, thiazolyl, thienofuryl, thienothienyl, and thienyl. Examples of tricyclic heteroaryl elements include, but are not limited to, 6,ll-dihydro-5H- benzo[5,6]cyclohepta[l,2-b]pyridine. Preferably, "heteroaryl" is a monocyclic or bicyclic moiety. As used herein, "aralkyl" is intended to mean an aryl moiety, as defined above, attached through a Ci-Cg alkyl linker, where alkyl is defined above. Examples of aralkyls inlcude, but are not limited to, benzyl and naphthylmethyl. As used herein, "heteroaralkyl" is intended to mean a heteroalkyl moiety, as defined above, attached through a Ci-Cg alkyl linker, where alkyl is defined above. Examples of heteroaralkyls include, but are not limited to, 2-pyridylmethyl, 2-imidazolylethyl and 2- quinolinylmethyl. As used herein, the term "substituted alkyl" is intended to include the branch or straight-chain alkyl group of 1 to 6 carbon atoms unless otherwise indicated, wherein the carbon atoms may be substituted with F, Cl, Br, CF3, N3, NO , NH2> oxo, -OH, -0(Cι- C6 alkyl), S(O)0-2- (Cl- C6 alkyl)S(O)0-2-, (Cl- C6 alkyl)S(O)0- 2(Cl- C6 alkyl)-, C3-C10 cycloalkyl, C2-Cβ alkenyl, C2-C6 alkynyl, -C(O)NH, (Cl- C6 alkyl)C(O)NH-, H2N-C(NH)-, (Cl- C6 alkyl)C(O)-, -0(Ci-C6 alkyl)CF3, (Cl- C6 alkyl)OC(O)-, (Cl- C6 alkyl)O(Cι- C6 alkyl)-, (Cl- C6 alkyl)C(0)2(Ci- C6 alkyl)-, (Cl- C6 alkyl)OC(O)NH-, aryl, benzyl, heterocycle, aralkyl, heteroaralkyl, halo-aryl, halo- benzyl, halo-heterocycle, cyano-aryl, cyano-benzyl and cyano- heterocycle.
As used herein, the terms "substituted aryl", "substituted heterocycle", "substituted aralkyl ", "substituted heteroaralkyl " and "substituted cycloalkyl" are intended to include the cyclic group containing from 1 to 3 substitutents in addition to the point of attachment to the rest of the compound. Such substitutents are preferably selected from the group which includes but is not limited to F, Cl, Br, CF3, NH2, N(Ci-Cβ alkyl)2, NO2, CN, (Ci-Cβ alkyDO-, -OH, (Cι-C6 alkyl)S(O)m-, (Ci-Cβ alkyl)C(0)NH-, H2N- C(NH)-, (C1-C6 alkyl)C(O)-, (Ci-C6 alkyl)OC(O)-, N3,(Cι-C6 alkyl)OC(O)NH- and C1-C20 alkyl.
When R6 and R7 or R7 and R7a are combined to form a ring, cyclic amine moieties are formed. Examples of such cyclic moieties include, but are not limited to:
Figure imgf000051_0001
In addition, such cyclic moieties may optionally include another heteroatom(s). Examples of such heteroatom-containing cyclic amine moieties include, but are not limited to:
Figure imgf000051_0002
Lines drawn into the ring systems from substituents (such as from R2, R3; R4 etc.) indicate that the indicated bond may be attached to any of the substitutable ring carbon or nitrogen atoms.
Preferably, Rla and Ri are independently selected from: hydrogen, -N(R8)2, R8C(O)NR8- or Ci-Cβ alkyl which is unsubstituted or substituted by -N(R8)2, R8O- or R8C(O)NR8-. Preferably, R is selected from: a) Cl-8 alkyl, unsubstituted or substituted with one or more of:
1) aryl or heterocycle, unsubstituted or substituted with: i) Cl-4 alkyl, ii) (CH2)pOR6, iii) (CH2)PNR6R7, iv) halogen, v) Cl-4 perfluoroalkyl,
2) OR6,
3) SR6, SO2R6, or
4) \ NR6R7
Y 0 ; b)
Figure imgf000052_0001
c) aryl, unsubstituted or substituted with one or more ! of:
1) Cl-8 alkyl,
2) Cl-8 perfluoroalkyl,
3) OR6,
4) SR6, SO2R6, or
5) \ . NR6R7 o d) -SO2R6
Preferably, R2 comprises at least one unsubstituted or substituted phenyl.
Preferably, R4 is selected from: hydrogen, perfluoroalkyl, F, Cl, Br, R8O-, R9S(O)m-, CN, NO2, R8 2N-C(NR8)-, R8C(O)-, N3, -N(R8)2, R9θC(O)NR8- and Ci-Cβ alkyl.
Preferably, R^ is hydrogen.
Preferably, R7b is Ci-Cβ alkyl substituted with hydrogen or an unsubstituted or substituted aryl group.
Preferably, R8 is selected from H, Ci-Cβ alkyl and benzyl. Preferably, A and A2 are independently selected from: a bond, -C(O)NR8-, -NR8C(O)-, O, -N(R8)-, -S(O)2N(R8)- and-N(R8)S(O)2-.
Preferably, V is selected from hydrogen, heterocycle and aryl.
Preferably, W is imidazolyl. Preferably, X is a bond, -C(=O)NRl0-, -NRl0c(=O)- or - NR10-.
Preferably, n, p and r are independently 0, 1, or 2. More preferably, r is 1. Preferably t is 1.
Preferably, the moiety
Figure imgf000053_0001
is selected from:
Figure imgf000053_0002
The pharmaceutically acceptable salts of the compounds of this invention include the conventional non-toxic salts of the compounds of this invention as formed, e.g., from non-toxic inorganic or organic acids. For example, such conventional non- toxic salts include those derived from inorganic acids such as hydrochloric, hydrobromic, sulfuric, sulfamic, phosphoric, nitric and the like: and the salts prepared from organic acids such as acetic, propionic, succinic, glycolic, stearic, lactic, malic, tartaric, citric, ascorbic, pamoic, maleic, hydroxymaleic, phenylacetic, glutamic, benzoic, salicylic, sulfanilic, 2-acetoxy-benzoic, fumaric, toluenesulfonic, methanesulfonic, ethane disulfonic, oxalic, isethionic, trifluoroacetic and the like.
It is intended that the definition of any substituent or variable (e.g., Rla, Z, n, etc.) at a particular location in a molecule be independent of its definitions elsewhere in that molecule. Thus, - N(R8)2 represents -NH2, -NHCH3, -NHC2H5, etc. It is understood that substituents and substitution patterns on the compounds of the instant invention can be selected by one of ordinary skill in the art to provide compounds that are chemically stable and that can be readily synthesized by techniques known in the art, as well as those methods set forth below, from readily available starting materials.
The pharmaceutically acceptable salts of the compounds of this invention can be synthesized from the compounds of this invention which contain a basic moiety by conventional chemical methods. Generally, the salts are prepared either by ion exchange chromatography or by reacting the free base with stoichiometric amounts or with an excess of the desired salt-forming inorganic or organic acid in a suitable solvent or various combinations of solvents.
Abbreviations used in the description of the chemistry and in the Examples that follow are:
Ac2θ Acetic anhydride;
Boc t-Butoxycarbonyl;
CBz Carbobenzyloxy;
DBU l,8-diazabicyclo[5.4.0]undec-7-ene;
DMAP 4-Dimethylaminopyridine;
DME 1,2-Dimethoxyethane;
DMF Dimethylformamide;
EDC l-(3-dimethylaminopropyl)-3-ethyl-carbodiimide hydrochloride;
Et3N Triethylamine;
EtOAc Ethyl acetate;
FAB Fast atom bombardment;
HOBT 1-Hydroxybenzotriazole hydrate;
HOOBT 3-Hydroxy-l,2,2-benzotriazin-4(3H)-one;
HPLC High-performance liquid chromatography;
MCPBA m-Chloroperoxybenzoic acid;
MsCl Methanesulfonyl chloride;
NaHMDS Sodium bis(trimethylsilyl)amide; Py Pyridine;
TFA Trifluoroacetic acid;
THF Tetrahydrofuran.
The compounds of this invention are prepared by employing reactions as shown in Schemes 1-3, in addition to other standard manipulations such as ester hydrolysis, cleavage of protecting groups, etc., as may be known in the literature or exemplified in the experimental procedures. While stereochemistry is shown in the Schemes, a person of ordinary skill in the art would understand that the illustrated compounds represent racemic mixtures which may be separated at a subsequent purification step or may be utilized as the racemic mixture.
These reactions may be employed in a linear sequence to provide the compounds of the invention or they may be used to synthesize fragments which are subsequently joined by the reductive alkylation or acylation reactions described in the Schemes.
SCHEME 1
Figure imgf000056_0001
8 Diastereomer B SCHEME 2
Figure imgf000057_0001
Figure imgf000057_0002
SCHEME 2A
Figure imgf000058_0001
Figure imgf000058_0002
SCHEME 2B
Figure imgf000059_0001
Figure imgf000059_0002
SCHEME 3
Figure imgf000060_0001
Figure imgf000060_0002
SCHEME 3 (CONT'D.)
Figure imgf000061_0001
Pd(PPh3)4 NDMBA
Figure imgf000061_0002
In the above Schemes, it is understood that
R is RU or a protected precursor thereof; and R' is R3a 0r R3b 0r protected precursor thereof.
The instant compounds are useful as pharmaceutical agents for mammals, especially for humans. These compounds may be administered to patients for use in the treatment of cancer. Examples of the type of cancer which may be treated with the compounds of this invention include, but are not limited to, colorectal carcinoma, exocrine pancreatic carcinoma, myeloid leukemias and neurological tumors. Such tumors may arise by mutations in the ras genes themselves, mutations in the proteins that can regulate Ras activity (i.e., neurofibromin (NF-1), neu, ser, abl, lck, fyn) or by other mechanisms. The compounds of the instant invention inhibit farnesyl- protein transferase and the famesylation of the oncogene protein Ras. The instant compounds may also inhibit tumor angiogenesis, thereby affecting the growth of tumors (J. Rak et al. Cancer Research, 55:4575- 4580 (1995)). Such anti-angiogenesis properties of the instant compounds may also be useful in the treatment of certain forms of blindness related to retinal vascularization.
The compounds of this invention are also useful for inhibiting other proliferative diseases, both benign and malignant, wherein Ras proteins are aberrantly activated as a result of oncogenic mutation in other genes (i.e., the Ras gene itself is not activated by mutation to an oncogenic form) with said inhibition being accomplished by the administration of an effective amount of the compounds of the invention to a mammal in need of such treatment. For example, the compounds are useful in the treatment of neurofibromatosis, which is a benign proliferative disorder.
The instant compounds may also be useful in the treatment of certain viral infections, in particular in the treatment of hepatitis delta and related viruses (J.S. Glenn et al. Science, 256:1331-1333 (1992). The compounds of the instant invention are also useful in the prevention of restenosis after percutaneous transluminal coronary angioplasty by inhibiting neointimal formation (C. Indolfi et al. Nature medicine, 1:541-545(1995). The instant compounds may also be useful in the treatment and prevention of polycystic kidney disease (D.L. Schaffner et al. American Journal of Pathology, 142:1051-1060 (1993) and B. Cowley, Jr. et al JΑSf-δ-B Journal, 2:A3160 (1988)).
The instant compounds may also be useful for the treatment of fungal infections.
In a preferred embodiment of the instant invention the compounds of this instant invention are selective inhibitors of farnesyl- protein transferase. A compound is considered a selective inhibitor of farnesyl-protein transferase, for example, when its in vitro farnesyl- protein transferase inhibitory activity, as assessed by the assay described in Example 2, is at least 100 times greater than the in vitro activity of the same compound against geranylgeranyl-protein transferase-type I in the assay described in Example 3. Preferably, a selective compound exhibits at least 1000 times greater activity against one of the enzymatic activities when comparing geranylgeranyl-protein transferase-type I inhibition and farnesyl-protein transferase inhibition.
In another preferred embodiment of the instant invention the compounds of this instant invention are dual inhibitors of farnesyl- protein transferase and geranylgeranyl-protein transferase type I. Such a dual inhibitor will exhibit certain characteristics when assessed in in vitro assays, which are dependent on the type of assay employed.
In a SEAP assay, such as described in Example 6, it is preferred that the dual inhibitor compound has an in vitro inhibitory activity (IC50) that is less than about 12 μM against K4B-Ras dependent activation of MAP kinases in cells. More preferably, the dual inhibitor compound has an in vitro inhibitory activity (IC50) against K4B-Ras dependent activation of MAP kinases in cells which is more than about 5 times lower than the inhibitory activity (IC50) against Myr-Ras dependent activation of MAP kinases in cells. Also more preferably, in a SEAP assay, the dual inhibitor compound has an inhibitory activity (IC50) that is less than about 10 nM against H-Ras dependent activation of MAP kinases in cells.
In a GGTase plus anion assay, such as described in Example 3, it is preferred that the dual inhibitor compound has an in vitro inhibitory activity (IC50) that is less than about 5 μM against transfer of a geranylgeranyl residue to a protein or peptide substrate comprising a CAAXO motif by geranylgeranyl-protein transferase type I in the presence of a modulating anion. More preferably, the dual inhibitor compound has an in vitro inhibitory activity (IC50) that is less than about 1 μM against transfer of a geranylgeranyl residue to a protein or peptide substrate comprising a CAAXG motif by geranylgeranyl- protein transferase type I in the presence of a modulating anion. Preferably, the dual inhibitor compound has an in vitro inhibitory activity (IC50) in the in vitro assay as described in Example 2 that is less than about 1 μM against transfer of a farnesyl residue to a protein or peptide substrate, comprising a CAAX motif, by farnesyl-protein transferase. more preferably, the dual inhibitor compound has an in vitro inhibitory activity (IC50) that is less than about lOOnM against transfer of a farnesyl residue to a protein or peptide substrate, comprising a CAAX- motif, by farnesyl-protein transferase. Also preferably, the dual inhibitor compound has an in vitro inhibitory activity (IC50) in the in vitro assay as described in Example 5, that is less than about 100 nM against the anchorage independent growth of H-ras- transformed mammalian fibroblasts.
The protein or peptide substrate utilized in the instant assay may incorporate any CAAX motif that is geranylgeranylated by GGTase-
I. The term "CAAX " will refer to such motifs that may be geranylgeranylated by GGTase-I. It is understood that some of the
G "CAAX " containing protein or peptide substrates may also be farnesylated by farnesyl-protein transferase. In particular such
C
"CAAX " motifs include (the corresponding human protein is in parentheses): CVIM (K4B-Ras) SE .ID.NO. 1, CVLL (mutated H-Ras) SEQ.ID.NO. 2, CWM (N-Ras) SEQ.ID.NO. 3, CUM (K4A-Ras) SEQ.ID.NO 4, CLLL (Rap-IA) SEQ.ID.NO. 5, CQLL (Rap-IB) SEQ.ID.NO. 6, CSIM SEQ.ID.NO. 7, CAIM SEQ.ID.NO. 8, CKVL SEQ.ID.NO. 9 and CLIM SEQ.ID.NO. 10 (PFX). Preferably, the CAAX motif is CVIM SEQ.ID.NO. 1.
F As used herein, the term "CAAX " is used to designate a protein or peptide substrate that incorporates four amino acid C- terminus motif that is farnesylated by farnesyl-protein transferase. It is
F understood that certain of the "CAAX " containing protein or peptide substrates may also be geranylgeranylated by GGTase-I. In particular
F such "CAAX " motifs include (the corresponding human protein is in parentheses): CVLS (H-ras) SEQ.ID.NO. 11, CVIM (K4B-Ras)
SEQ.ID.NO. 1 and CWM (N-Ras) SEQ.ID.NO.3.
The compounds of this invention may be administered to mammals, preferably humans, either alone or, preferably, in combination with pharmaceutically acceptable carriers or diluents, optionally with known adjuvants, such as alum, in a pharmaceutical composition, according to standard pharmaceutical practice. The compounds can be administered orally or parenterally, including the intravenous, intramuscular, intraperitoneal, subcutaneous, rectal and topical routes of administration.
For oral use of a chemotherapeutic compound according to this invention, the selected compound may be administered, for example, in the form of tablets or capsules, or as an aqueous solution or suspension. In the case of tablets for oral use, carriers which are commonly used include lactose and corn starch, and lubricating agents, such as magnesium stearate, are commonly added. For oral administration in capsule form, useful diluents include lactose and dried corn starch. When aqueous suspensions are required for oral use, the active ingredient is combined with emulsifying and suspending agents. If desired, certain sweetening and/or flavoring agents may be added. For intramuscular, intraperitoneal, subcutaneous and intravenous use, sterile solutions of the active ingredient are usually prepared, and the pH of the solutions should be suitably adjusted and buffered. For intravenous use, the total concentration of solutes should be controlled in order to render the preparation isotonic.
The present invention also encompasses a pharmaceutical composition useful in the treatment of cancer, comprising the administration of a therapeutically effective amount of the compounds of this invention, with or without pharmaceutically acceptable carriers or diluents. Suitable compositions of this invention include aqueous solutions comprising compounds of this invention and pharmacolo-gically acceptable carriers, e.g., saline, at a pH level, e.g., 7.4. The solutions may be introduced into a patient's intramuscular blood-stream by local bolus injection.
As used herein, the term "composition" is intended to encompass a product comprising the specified ingredients in the specific amounts, as well as any product which results, directly or indirectly, from combination of the specific ingredients in the specified amounts.
When a compound according to this invention is administered into a human subject, the daily dosage will normally be determined by the prescribing physician with the dosage generally varying according to the age, weight, and response of the individual patient, as well as the severity of the patient's symptoms.
In one exemplary application, a suitable amount of compound is administered to a mammal undergoing treatment for cancer. Administration occurs in an amount between about 0.1 mg/kg of body weight to about 60 mg/kg of body weight per day, preferably of between 0.5 mg/kg of body weight to about 40 mg/kg of body weight per day.
The compounds of the instant invention are also useful as a component in an assay to rapidly determine the presence and quantity of farnesyl-protein transferase (FPTase) in a composition. Thus the composition to be tested may be divided and the two portions contacted with mixtures which comprise a known substrate of FPTase (for example a tetrapeptide having a cysteine at the amine terminus) and farnesyl pyrophosphate and, in one of the mixtures, a compound of the instant invention. After the assay mixtures are incubated for an sufficient period of time, well known in the art, to allow the FPTase to farnesylate the substrate, the chemical content of the assay mixtures may be determined by well known immunological, radiochemical or chromatographic techniques. Because the compounds of the instant invention are selective inhibitors of FPTase, absence or quantitative reduction of the amount of substrate in the assay mixture without the compound of the instant invention relative to the presence of the unchanged substrate in the assay containing the instant compound is indicative of the presence of FPTase in the composition to be tested.
It would be readily apparent to one of ordinary skill in the art that such an assay as described above would be useful in identifying tissue samples which contain farnesyl-protein transferase and quantitating the enzyme. Thus, potent inhibitor compounds of the instant invention may be used in an active site titration assay to determine the quantity of enzyme in the sample. A series of samples composed of aliquots of a tissue extract containing an unknown amount of farnesyl-protein transferase, an excess amount of a known substrate of FPTase (for example a tetrapeptide having a cysteine at the amine terminus) and farnesyl pyrophosphate are incubated for an appropriate period of time in the presence of varying concentrations of a compound of the instant invention. The concentration of a sufficiently potent inhibitor (i.e., one that has a Ki substantially smaller than the concentration of enzyme in the assay vessel) required to inhibit the enzymatic activity of the sample by 50% is approximately equal to half of the concentration of the enzyme in that particular sample.
EXAMPLES
Examples provided are intended to assist in a further understanding of the invention. Particular materials employed, species and conditions are intended to be further illustrative of the invention and not limitative of the reasonable scope thereof. Purification by HPLC was utilized for Example 1 as set forth below.
EXAMPLE 1
Preparation of 4-phenyl-4,5,6,7-tetrahydro-lH-imidazo[4,5] pyridine-6(S)- carboxylic acid {2-F3-(4-cyano-benzyl)-3H -imidazol-4-yll-ethyl)-amide
Step A: 4-phenyl-6,7-dihydro-4-H-imidazo[4,5]pyridine-l,5,6(S)- tricarboxylic acid 1.5-di-tert-butyl ester
To a solution of L-histidine (3.1g, 0.02mol) and KOH (1.12g, 0.02mol) in water (50ml) and EtOH (50ml) was added benzaldehyde (3.06ml, 0.03mol). The resulting solution was heated at 70°C for 18h. The solvents were removed in vacua. The residue was dissolved in THF (70ml) and water (30ml) and Boc anhydryde (4.37g, 0.04mol) was added and the mixture was stirred for 18h at 25°C. The solvents were removed in vacuo and the residue was partitioned with EtOAc and water. The water layer was adjusted to pH=5 with 1M HC1 and extracted twice with EtOAc. The EtOAc layers from the pH=5 extraction were combined and dried with brine and magnesium sulfate. The EtOAc was removed in vacuo to obtain the title compound as a solid which was used in the next step as is. FAB mas spectrum m/e 444 (m+1).
Step B: 6(S)-{2-[3-(4-cyano-benzyl)-3H-imidazol-4yl]ethylcarbamoyl}-
4-phenyl-6,7-dihydro-4H-imidazo[4,5-] pyridine-1,5- dicarboxylic acid di-tert-buty\ ester
To a solution of the product as described in Step A above, [4- phenyl-6,7-dihydro-4-H-imidazo[4,5]pyridine-l,5,6(S)-tricarboxylic acid 1,5-di-tert-butyl ester] (0.34g, 0.826mm), cyanobenzyl histamine
(5)(0.187g, 0.826mm), HOBt (0.126g, 0.826mm), EDC (0.158g, 0.826mm) in DMF (5ml) was added NMM (0.27ml, 2.48mm). The solvents were removed in vacuo and the residue was partitioned with EtOAc and saturated sodium bicarbonate. The EtOAc layer was dried with brine and magnesium sulfate. The EtOAc was removed in vacuo to obtain the title compound as a solid which was used in the next step as is.
Step C: 4-phenyl-4,5,6,7-tetrahydro-lH-imidazo[4,5] pyridine-β(S)- carboxylic acid {2-[3-(4-cyano-benzyl)-3H -imidazol-4-yl]- ethyll-amide
To a solution of 6(S)-{2-[3-(4-cyano-benzyl)-3H-imidazol- 4yl]ethylcarbamoyl}-4-phenyl-6,7-dihydro-4H-imidazo[4,5-] pyridine-1,5- dicarboxylic acid di-tert-butyl ester (0.58g) in CH2CI2 (10ml) was added TFA (5ml) and the solution was stirred 45min. The solvents were removed in vacuo and the crude product was purified by preparative HPLC to obtain diastereomer A and diastereomer B as the title compounds.
EXAMPLE 2
In vitro inhibition of ras farnesyl transferase
Assays of farnesyl-protein transferase. Partially purified bovine FPTase and Ras peptides (Ras-CVLS SEQ.ID.NO. 11, Ras-CVIM SEQ.ID.NO. 1 and Ras-CAIL SEQ.ID.NO. 12) were prepared as described by Schaber et a , J. Biol. Chem. 265:14701-14704 (1990), Pompliano, et aL, Biochemistry 31:3800 (1992) and Gibbs et al., PNAS U.S.A. 86:6630-6634 (1989), respectively. Bovine FPTase was assayed in a volume of 100 ml containing 100 mM N-(2-hydroxy ethyl) piperazine-iV- (2-ethane sulfonic acid) (HEPES), pH 7.4, 5 mM MgCl2, 5 mM dithiothreitol (DTT), 100 mM [3H] -farnesyl diphosphate ([3H]-FPP; 740 CBq/mmol, New England Nuclear), 650 nM Ras-CVLS and 10 mg/ml FPTase at 31°C for 60 min. Reactions were initiated with FPTase and stopped with 1 ml of 1.0 M HCL in ethanol. Precipitates were collected onto filter-mats using a TomTec Mach II cell harvestor, washed with 100% ethanol, dried and counted in an LKB b-plate counter. The assay was linear with respect to both substrates, FPTase levels and time; less than 10% of the [3HJ-FPP was utilized during the reaction period. Purified compounds were dissolved in 100% dimethyl sulfoxide (DMSO) and were diluted 20-fold into the assay. Percentage inhibition is measured by the amount of incorporation of radioactivity in the presence of the test compound when compared to the amount of incorporation in the absence of the test compound.
Human FPTase was prepared as described by Omer et aL , Biochemistry 32:5167-5176 (1993). Human FPTase activity was assayed as described above with the exception that 0.1% (w/v) polyethylene glycol 20,000, 10 mM ZnCl2 and 100 nM Ras-CVIM were added to the reaction mixture. Reactions were performed for 30 min., stopped with 100 ml of 30% (v/v) trichloroacetic acid (TCA) in ethanol and processed as described above for the bovine enzyme.
The compounds of the instant invention described in the above Examples were tested for inhibitory activity against human FPTase by the assay described above and were found to have IC50 of <50 μM.
EXAMPLE 3
Modified In vitro GGTase inhibition asssay
The modified geranylgeranyl-protein transferase inhibition assay is carried out at room temperature. A typical reaction contains (in a final volume of 50 mL): [3 H] geranylgeranyl diphosphate, biotinylated
Ras peptide, 50 mM HEPES, pH 7.5, a modulating anion (for example 10 mM glycerophosphate or 5mM ATP), 5 mM MgCl2, 10 mM ZnCl2, 0.1%
PEG (15-20,000), 2 mM dithiothreitol, and geranylgeranyl-protein transferase type I(GGTase). The GGTase-type I enzyme employed in the assay is prepared as described in U.S. Pat. No. 5,470,832, incorporated by reference. The Ras peptide is derived from the K4B-Ras protein and has the following sequence: biotinyl-GKKKKKKSKTKCVIM (single amino acid code) (SEQ.ID.NO.: 13). Reactions are initiated by the addition of GGTase and stopped at timed intervals (typically 15 min) by the addition of 200 mL of a 3 mg/mL suspension of streptavidin SPA beads (Scintillation Proximity Assay beads, Amersham) in 0.2 M sodium phosphate, pH 4, containing 50 mM EDTA, and 0.5% BSA. The quenched reactions are allowed to stand for 2 hours before analysis on a Packard TopCount scintillation counter.
For inhibition studies, assays are run as described above, except inhibitors are prepared as concentrated solutions in 100% dimethyl sulfoxide and then diluted 25-fold into the enzyme assay mixture. IC50 values are determined with Ras peptide near JKM concentrations. Enzyme and nonsaturating substrate conditions for inhibitor IC50 determinations are as follows: 75 pM GGTase-I, 1.6 mM Ras peptide, 100 nM geranylgeranyl diphosphate.
EXAMPLE 4
Cell-based in vitro ras prenylation assay
The cell lines used in this assay consist of either Ratl or NIH3T3 cells transformed by either viral H-ras; an N-ras chimeric gene in which the C-terminal hypervariable region of viral-H-ras was substituted with the corresponding region from the N-ras gene; or ras-CVLL, a viral-H-ras mutant in which the C-terminal exon encodes leucine instead of serine, making the encoded protein a substrate for geranylgeranylation by GGTase-I. The assay can also be performed using cell lines transformed with human H-ras, N-ras or K4B-ras. The assay is performed essentially as described in DeClue, J.E. et al., Cancer Research 51:712-717, (1991). Cells in 10 cm dishes at 50-75% confluency are treated with the test compound(s) (final concentration of solvent, methanol or dimethyl sulfoxide, is 0.1%). After 4 hours at 37°C, the cells are labelled in 3 ml methionine-free DMEM supplemented with 10% regular DMEM, 2% fetal bovine serum, 400 mCi [35 S] methionine (1000 Ci/mmol) and test compound(s). Cells treated with lovastatin, a compound that blocks Ras processing in cells by inhibiting the rate-limiting step in the isoprenoid biosynthetic pathway (Hancock, J.F. et al. Cell, 57:1167 (1989); DeClue, J.E. et al. Cancer Res. , 51:712 (1991); Sinensky, M. et al. J. Biol. Chem., 265:19937 (1990)), serve as a positive control in this assay. After an additional 20 hours, the cells are lysed in 1 ml lysis buffer (1% NP40/20 mM HEPES, pH 7.5/5 mM MgCl2/lmM DTT/10 mg/ml aprotinen/2 mg/ml leupeptin/2 mg/ml antipain/0.5 mM PMSF) and the lysates cleared by centrifugation at 100,000 x g for 45 min. Alternatively, four hours after the additon of the labelling media, the media is removed, the cells washed, and 3 ml of media containing the same or a different test compound added. Following an additional 16 hour incubation, the lysis is carried out as above. Aliquots of lysates containing equal numbers of acid-precipitable counts are bought to 1 ml with IP buffer (lysis buffer lacking DTT) and immunoprecipitated with the ras-specific monoclonal antibody Y13-259 (Furth, M.E. et al., J. Virol. 43:294-304, (1982)). Following a 2 hour antibody incubation at 4°C, 200 ml of a 25% suspension of protein A-Sepharose coated with rabbit anti rat IgG is added for 45 min. The immunoprecipitates are washed four times with IP buffer (20 nM HEPES, pH 7.5/1 mM EDTA/1% Triton X-100.0.5% deoxycholate/0.1%/SDS/0.1 M NaCl) boiled in SDS-PAGE sample buffer and loaded on 13% acrylamide gels. When the dye front reached the bottom, the gel is fixed, soaked in Enlightening, dried and autoradiographed. The intensities of the bands corresponding to prenylated and nonprenylated Ras proteins are compared to determine the percent inhibition of prenyl transfer to protein.
EXAMPLE 5
Cell-based in vitro anchorage independent growth assay (SALSA)
SALSA (Soft Agar-Like Surrogate Assay) measures the inhibition of anchorage-independent growth by prenyl-transferase inhibitors. Only transformed cells are able to grow anchorage- independently in the SALSA format. Additionally, cells growing in the SALSA format grow in clumps, resembling the colonies formed in soft agar. SALSA may been used to measure the growth inhibition by prenyl-transferase inhibitors in a variety of transformed cell lines, including Ratl fϊbroblasts transformed with viral-H-ras (H-ras/ratl), as well as a panel of human tumor cell lines (HTL's).
SALSA is performed in 96-well plates that are coated with a thin film of the polymer, PolyHEMA (Poly(2-hydroxyethyl methacrylate)), which prevents cells from attaching to the plate. Ratl fibroblast cells transformed with v-Ha-ras (this cell line has been deposited in the ATCC on August 19, 1997 under the terms of the Budapest convention and has been given a designation of ATCC CRL 12387) are seeded at 5000 cells/well, grown for 4 hr, then vehicle or half-log dilutions of test compound (in either an 8 or 12 point titration) are added. The cells are then grown for 6 days at 37 degrees, without changing the growth media or adding fresh compound. At day 6, cell growth is assessed via a colorimetric assay that measures the cleavage of the tetrazolium dye, MTT, to an insoluble purple formazan, a reaction dependent upon mitochondrial dehydrogenases. At day 6, the cells are incubated for 4 hr with 0.5 mg/ml MTT, and then SDS is added to 9% w/v to lyse the cells and solubilize the insoluble MTT-formazan. The amount of MTT metabolism is quantitated via spectrophotometric detection at 570 nM. Dose-inhibition curves and ICδo's are determined.
EXAMPLE 6
Construction of SEAP reporter plasmid pDSElOO The SEAP reporter plasmid, pDSElOO was constructed by ligating a restriction fragment containing the SEAP coding sequence into the plasmid pCMV-RE-AKI. The SEAP gene is derived from the plasmid pSEAP2-Basic (Clontech, Palo Alto, CA). The plasmid pCMV- RE-AKI was constructed by Deborah Jones (Merck) and contains 5 sequential copies of the 'dyad symmetry response element' cloned upstream of a 'CAT-TATA' sequence derived from the cytomegalovirus immediate early promoter. The plasmid also contains a bovine growth hormone poly- A sequence.
The plasmid, pDSElOO was constructed as follows. A restriction fragment encoding the SEAP coding sequence was cut out of the plasmid pSEAP2-Basic using the restriction enzymes EcoRl and Hpal. The ends of the linear DNA fragments were filled in with the Klenow fragment of E. coli DNA Polymerase I. The 'blunt ended' DNA containing the SEAP gene was isolated by electrophoresing the digest in an agarose gel and cutting out the 1694 base pair fragment. The vector plasmid pCMV-RE-AKI was linearized with the restriction enzyme Bgl- II and the ends filled in with Klenow DNA Polymerase I. The SEAP DNA fragment was blunt end ligated into the pCMV-RE-AKI vector and the ligation products were transformed into DH5-alpha E. coli cells (Gibco-BRL). Transformants were screened for the proper insert and then mapped for restriction fragment orientation. Properly oriented recombinant constructs were sequenced across the cloning junctions to verify the correct sequence. The resulting plasmid contains the SEAP coding sequence downstream of the DSE and CAT-TATA promoter elements and upstream of the BGH poly-A sequence.
Cloning of a Myristylated viral-H-rαs expression plasmid
A DNA fragment containing viral-H-rαs can be PCRed from plasmid "H- 1" (Ellis R. et al. J. Virol. 36, 408, 1980) using the following oligos.
Sense strand:
5'TCTCCTCGAGGCCACCATGGGGAGTAGCAAGAGCAAGCCTAA GGACCCCAGCCAGCGCCGGATGACAGAATACAAGCTTGTGGTG G 3'. (SEQ.ID.NO.: 14)
Antisense: 5'CACATCTAGATCAGGACAGCACAGACTTGCAGC 3'. (SEQ.ID.NO.: 15)
A sequence encoding the first 15 aminoacids of the v-src gene, containing a myristylation site, is incorporated into the sense strand oligo. The sense strand oligo also optimizes the 'Kozak' translation initiation sequence immediately 5' to the ATG start site. To prevent prenylation at the viral-rαs C-terminus, cysteine 186 would be mutated to a serine by substituting a G residue for a C residue in the C-terminal antisense oligo. The PCR primer oligos introduce an Xhol site at the 5' end and a Xbal site at the 3'end. The Xhol-Xbal fragment can be ligated into the mammalian expression plasmid pCI (Promega) cut with Xhol and Xbal. This results in a plasmid in which the recombinant myr- viral-H-ras gene is constitutively transcribed from the CMV promoter of the pCI vector.
Cloning of a viral-H-rαs-CVLL expression plasmid
A viral-H-rαs clone with a C-terminal sequence encoding the amino acids CVLL can be cloned from the plasmid "H-l" (Ellis R. et al. J. Virol. 36, 408, 1980) by PCR using the following oligos.
Sense strand:
5'TCTCCTCGAGGCCACCATGACAGAATACAAGCTTGTGGTGG-3' (SEQ.ID.NO.: 16)
Antisense strand:
5'CACTCTAGACTGGTGTCAGAGCAGCACACACTTGCAGC-3'
(SEQ.ID.NO.: 17)
The sense strand oligo optimizes the 'Kozak' sequence and adds an Xhol site. The antisense strand mutates serine 189 to leucine and adds an Xbal site. The PCR fragment can be trimmed with Xhol and Xbal and ligated into the Xhol-Xbal cut vector pCI (Promega). This results in a plasmid in which the mutated viral-H-rαs-CVLL gene is constitutively transcribed from the CMV promoter of the pCI vector.
Cloning of c-H-rαs-Leu61 expression plasmid
The human c-H-rαs gene can be PCRed from a human cerebral cortex cDNA library (Clontech) using the following oligonucleotide primers.
Sense strand:
5'-GAGAGAATTCGCCACCATGACGGAATATAAGCTGGTGG-3' (SEQ.ID.NO.: 18) Antisense strand:
5'-GAGAGTCGACGCGTCAGGAGAGCACACACTTGC-3' (SEQ.ID.NO.: 19)
The primers will amplify a c-H-rαs encoding DNA fragment with the primers contributing an optimized 'Kozak' translation start sequence, an EcoRI site at the N-terminus and a Sal I stite at the C-terminal end. After trimming the ends of the PCR product with EcoRI and Sal I, the c- H-ras fragment can be ligated ligated into an EcoRI -Sal I cut mutagenesis vector pAlter-1 (Promega). Mutation of glutamine-61 to a leucine can be accomplished using the manufacturer's protocols and the following oligonucleotide:
5'-CCGCCGGCCTGGAGGAGTACAG-3' (SEQ.ID.NO.: 20)
After selection and sequencing for the correct nucleotide substitution, the mutated c-H-rαs-Leu61 can be excised from the pAlter-1 vector, using EcoRI and Sal I, and be directly ligated into the vector pCI (Promega) which has been digested with EcoRI and Sal I. The new recombinant plasmid will constitutively transcribe c-H-rαs-Leu61 from the CMV promoter of the pCI vector.
Cloning of a c-N-rαs-Val-12 expression plasmid
The human c-N-rαs gene can be PCRed from a human cerebral cortex cDNA library (Clontech) using the following oligonucleotide primers.
Sense strand:
5'-GAGAGAATTCGCCACCATGACTGAGTACAAACTGGTGG-3' (SEQ.ID.NO.: 21)
Antisense strand: 5'-GAGAGTCGACTTGTTACATCACCACACATGGC-3' (SEQ.ID.NO.
22) The primers will amplify a c-N-rαs encoding DNA fragment with the primers contributing an optimized 'Kozak' translation start sequence, an EcoRI site at the N-terminus and a Sal I stite at the C-terminal end. After trimming the ends of the PCR product with EcoRI and Sal I, the c- N-ras fragment can be ligated into an EcoRI -Sal I cut mutagenesis vector pAlter-1 (Promega). Mutation of glycine-12 to a valine can be accomplished using the manufacturer's protocols and the following oligonucleotide:
5'-GTTGGAGCAGTTGGTGTTGGG-3' (SEQ.ID.NO.: 23)
After selection and sequencing for the correct nucleotide substitution, the mutated c-N-rαs-Val-12 can be excised from the pAlter-1 vector, using EcoRI and Sal I, and be directly ligated into the vector pCI
(Promega) which has been digested with EcoRI and Sal I. The new recombinant plasmid will constitutively transcribe c-N-rαs-Val-12 from the CMV promoter of the pCI vector.
Cloning of a c-K-r s-Val-12 expression plasmid
The human c-K-rαs gene can be PCRed from a human cerebral cortex cDNA library (Clontech) using the following oligonucleotide primers.
Sense strand:
5'-GAGAGGTACCGCCACCATGACTGAATATAAACTTGTGG-3' (SEQ.ID.NO.: 24)
Antisense strand: 5'-CTCTGTCGACGTATTTACATAATTACACACTTTGTC-3' (SEQ.ID.NO.: 25)
The primers will amplify a c-K-rαs encoding DNA fragment with the primers contributing an optimized 'Kozak' translation start sequence, a Kpnl site at the N-terminus and a Sal I stite at the C-terminal end. After trimming the ends of the PCR product with Kpn I and Sal I, the c- K-rαs fragment can be ligated into a Kpnl -Sal I cut mutagenesis vector pAlter-1 (Promega). Mutation of cysteine-12 to a valine can be accomplished using the manufacturer's protocols and the following oligonucleotide :
5'-GTAGTTGGAGCTGTTGGCGTAGGC-3' (SEQ.ID.NO.: 26)
After selection and sequencing for the correct nucleotide substitution, the mutated c-K-røs-Val-12 can be excised from the pAlter-1 vector, using Kpnl and Sal I, and be directly ligated into the vector pCI (Promega) which has been digested with Kpnl and Sal I. The new recombinant plasmid will constitutively transcribe c-K-rαs-Val-12 from the CMV promoter of the pCI vector.
SEAP assay
Human C33A cells (human epitheial carcenoma - ATTC collection) are seeded in 10cm tissue culture plates in DMEM + 10% fetal calf serum + IX Pen Strep + IX glutamine + IX NEAA. Cells are grown at 37°C in a 5% C02 atmosphere until they reach 50 -80% of conflunecy.
The transient transfection is performed by the CaP04 method (Sambrook et al., 1989). Thus, expression plasmids for H-rαs, N- ras, K-rαs, Myr-rαs or H-rαs-CVLL are co-precipitated with the DSE- SEAP reporter construct. For 10cm plates 600ml of CaCl2 -DNA solution is added dropwise while vortexing to 600ml of 2X HBS buffer to give 1.2ml of precipitate solution (see recipes below). This is allowed to sit at room temperature for 20 to 30 minutes. While the precipitate is forming, the media on the C33A cells is replaced with DMEM (minus phenol red; Gibco cat. # 31053-028)+ 0.5% charcoal stripped calf serum + IX
(Pen/Strep, Glutamine and nonessential aminoacids). The CaPθ4-DNA precipitate is added dropwise to the cells and the plate rocked gently to distribute. DNA uptake is allowed to proceed for 5-6 hrs at 37°C under a 5% CO2 atmosphere. Following the DNA incubation period, the cells are washed with PBS and trypsinized with 1ml of 0.05% trypsin. The 1 ml of trypsinized cells is diluted into 10ml of phenol red free DMEM + 0.2% charcoal stripped calf serum + IX (Pen/Strep, Glutamine and NEAA ). Transfected cells are plated in a 96 well microtiter plate (lOOml/well) to which drug, diluted in media, has already been added in a volume of 100ml. The final volume per well is 200ml with each drug concentration repeated in triplicate over a range of half-log steps.
Incubation of cells and drugs is for 36 hrs at 37° under C02- At the end of the incubation period, cells are examined microscopically for evidence of cell distress. Next, 100ml of media containing the secreted alkaline phosphatase is removed from each well and transferred to a microtube array for heat treatment at 65°C for 1 hr to inactivate endogenous alkaline phosphatases (but not the heat stable secreted phosphatase).
The heat treated media is assayed for alkaline phosphatase by a luminescence assay using the luminescence reagent CSPD® (Tropix, Bedford, Mass.). A volume of 50 ml media is combinRased with 200 ml of CSPD cocktail and incubated for 60 minutes at room temperature. Luminesence is monitored using an ML2200 microplate luminometer (Dynatech). Luminescence reflects the level of activation of the fos reporter construct stimulated by the transiently expressed protein.
DNA-CaPθ4 precipitate for 10cm. plate of cells
Ras expression plasmid (lmg/ml) 10ml DSE-SEAP Plasmid (lmg/ml) 2ml
Sheared Calf Thymus DNA (lmg/ml) 8ml 2M CaCl2 74ml dH2θ 506ml
2X HBS Buffer 280mM NaCl lOmM KC1
1.5mM Na2HPθ4 2H2O
12mM dextrose 50mM HEPES Final pH = 7.05
Luminesence Buffer (26ml)
Assay Buffer 20ml
Emerald Reagent™ (Tropix) 2.5ml lOOmM homoarginine 2.5ml
CSPD Reagent® (Tropix) 1.0ml
Assay Buffer
Add 0.05M Na2Cθ3 to 0.05M NaHCθ3 to obtain pH 9.5. Make ImM in MgCl2
EXAMPLE 7
In vivo tumor growth inhibition assay (nude mouse)
In vivo efficacy as an inhibitor of the growth of cancer cells may be confirmed by several protocols well known in the art. Examples of such in vivo efficacy studies are described by N. E. Kohl et al. (Nature Medicine, 1:792-797 (1995)) and N. E. Kohl et al. (Proc. Nat. Acad. Sci. U.S.A. , 91:9141-9145 (1994)).
Rodent fibroblasts transformed with oncogenically mutated human Ha-rαs or Ki-rαs (10 cells/animal in 1 ml of DMEM salts) are injected subcutaneously into the left flank of 8-12 week old female nude mice (Harlan) on day 0. The mice in each oncogene group are randomly assigned to a vehicle, compound or combination treatment group.
Animals are dosed subcutaneously starting on day 1 and daily for the duration of the experiment. Alternatively, the farnesyl-protein transferase inhibitor may be administered by a continuous infusion pump. Compound, compound combination or vehicle is delivered in a total volume of 0.1 ml. Tumors are excised and weighed when all of the vehicle-treated animals exhibited lesions of 0.5 - 1.0 cm in diameter, typically 11-15 days after the cells were injected. The average weight of the tumors in each treatment group for each cell line is calculated.

Claims

WHAT IS CLAIMED IS:
1. A compound which inhibits farnesyl-protein transferase of the formula A:
Figure imgf000082_0002
V - A1(CR1 a 2)nA2(CR1 a 2)n
Figure imgf000082_0001
A
wherein:
Rla. Rib ancl Rlc are independently selected from: a) hydrogen, b) unsubstituted or substituted aryl, unsubstituted or substituted heterocycle, C3-C10 cycloalkyl, C2-C6 alkenyl, C2-C6 alkynyl, R80-, R9S(0)m-, R8C(0)NR8-, CN, NO2, (R8)2N-C(NR8)-, R8C(0)-, R8OC(O)-, N3, -N(R8)2J or R90C(0)NR8-, c) C1-C6 alkyl unsubstituted or substituted by unsubstituted or substituted aryl, heterocyclic, C3-C10 cycloalkyl, C -C6 alkenyl, C2-C╬▓ alkynyl, R80-, R9S(0)m-, R8C(0)NR8-, CN, (R8)2N-C(NR8)-, RSC(O)-, R8OC(0)-, N3, -N(R8)2, or R9OC(0)-NR8-;
R^ is selected from: H; unsubstituted or substituted Cl-8 alkyl, unsubstituted or substituted C2-8 alkenyl, unsubstituted or substituted aryl,
Figure imgf000082_0003
unsubstituted or substituted heterocycle, O ' O and
-S(0)2R6, wherein the substituted group is substituted with one or more of: 1) aryl or heterocycle, unsubstituted or substituted with one or two groups selected from: a) Cl-4 alkyl, b) (CH2)pOR6, c) (CH2)pNR R7, d) halogen, e) Cl-4 perfluoroalkyl,
2) C3-6 cycloalkyl,
3) OR6, 4) SR6, S(0)R6, S0 R6,
6D7
5) ΓÇö NR┬░R
Figure imgf000083_0001
8) - ╬│NR6R7
O
9) ΓÇö O^/OR6
T O
10) \^NR6R7
O
11) ΓÇö S02-NR6R7
Figure imgf000083_0002
Figure imgf000084_0001
14)
^τ 0-0R6
15) Cl-8 alkyl, or
16) Cl-8 perfluoroalkyl;
R3a and R3b are independently absent or selected from: H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted heteroaryl, unsubstituted or substituted aralkyl and unsubstituted or substituted heteroaralkyl;
R4 is independently selected from: a) hydrogen, b) unsubstituted or substituted aryl, unsubstituted or substituted heterocycle, C3-C10 cycloalkyl, C2-C╬▓ alkenyl, C -C╬▓ alkynyl, perfluoroalkyl, F, Cl, Br, R8O-, R9S(0)m-,
R8C(0)NR8-, CN, N02, R82N-C(NR8)-, R╬▓c(O)-, R8OC(0)-, N3, -N(R8)2, or R90C(0)NR8-, and c) C1-C6 alkyl unsubstituted or substituted by aryl, heterocycle, C3-C10 cycloalkyl, C2-C6 alkenyl, C2-C6 alkynyl, perfluoroalkyl, F, Cl, Br, R8O-, R9S(0)m-,
R8C(O)NH-, CN, H2N-C(NH)-, R8C(O)-, R╬▓╬╕C(O)-, N3, -N(R8)2, or R8╬╕C(0)NH-;
R5 is independently selected from: a) hydrogen, b) C2-C6 alkenyl, C2-C6 alkynyl, C3-C6 cycloalkyl, perfluoroalkyl, F, Cl, Br, R80-, R9S(0)m-, R8C(0)NR8-, CN, NO2, (R8)2N-C-(NR8)-, R8C(0)-, R8╬╕C(0)-, N3, -N(R8) , or R90C(0)NR8-, and c) C1-C6 alkyl, unsubstituted or substituted by perfluoroalkyl, F, Cl, Br, R80-, R9S(0)m-, R8C(0)NR8-, CN, (R8)2N- C(NR8)-, R8C(0)-, R8╬╕C(0)-, N3, -N(R8)2, or R90C(0)NR8-;
R6, R7 and R7a are independently selected from: H; Cl-4 alkyl, C3-6 cycloalkyl, heterocycle, aryl, Cl-4 perfluoroalkyl, unsubstituted or substituted with one or two substituents selected from: a) Cl-4 alkoxy, b) substituted or unsubstituted aryl or substituted or unsubstituted heterocycle, c) halogen, d) HO,
R* e)
O
OR£ f)
O g) -S(0)mR9 , or
h) N(R8)2; or
R6 and R7 may be joined in a ring; R7 and R7a may be joined in a ring;
R8 is independently selected from hydrogen, C1-C6 alkyl, benzyl, 2,2,2- trifluoroethyl and aryl;
R9 is independently selected from C1-C6 alkyl and aryl;
Rl┬░ is selected from: H; R8C(0)-; R9S(0)m-; unsubstituted or substituted Cl-4 alkyl, unsubstituted or substituted C3-6 cycloalkyl, unsubstituted or substituted heterocycle, unsubstituted or substituted aryl, substituted aroyl, unsubstituted or substituted heteroaroyl, substituted arylsulfonyl, unsubstituted or substituted heteroarylsulfonyl, wherein the substituted group is substituted with one or two substituents selected from: a) Cl-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO,
e)
O
OR8 f) O
g) -S(0)mR 9
Figure imgf000086_0001
i) C3-6 cycloalkyl;
RU is selected from
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted aralkyl, unsubstituted or substituted heteroaryl and unsubstituted or substituted heteroaralkyl;
Al and A-2 are independently selected from: a bond, -CH=CH-, -CΓëíC-, -C(O)-, -C(0)NR8-, -NR8C(0)-, O, -N(R8)-, -S(0)2N(R8)-, -
Figure imgf000086_0002
J and K are independently selected from N, NH or CHy;
V is selected from: a) hydrogen, b) heterocycle, c) aryl, d) C1-C20 alkyl wherein from 0 to 4 carbon atoms are replaced with a a heteroatom selected from O, S, and N, and e) C2-C20 alkenyl, provided that V is not hydrogen if Al is S(0)m and V is not hydrogen if Al is a bond, n is 0 and A-2 is S(0)m;
W is a heterocycle;
X is a bond, -C(=0)NRl┬░-, -NRl0C(=O)-, -S(0)m-, -NRlO-, O or -C(=0)-;
m is 0, 1 or 2; n is 0, 1, 2, 3 or 4; p is 0, 1, 2, 3 or 4; q is 0, 1, 2, 3 or 4; r is 0 to 5, provided that r is 0 when V is hydrogen; s is l or 2; t is 0 or 1; and y is l or 2; the dashed lines represent optional double bonds;
or an optical isomer or pharmaceutically acceptable salt thereof.
2. The compound according to Claim 1, which inhibits farnesyl-protein transferase, of the formula B:
Figure imgf000087_0001
B wherein:
Rla and Rlc are independently selected from: hydrogen, C3-C10 cycloalkyl, R80-, -N(R8)2, F or Ci-C╬▓ alkyl;
Rib is independently selected from: a) hydrogen, b) unsubstituted or substituted aryl, unsubstituted or substituted heterocycle, C3-C6 cycloalkyl, R80-, -N(R8)2 or C2-C6 alkenyl, c) C1-C6 alkyl unsubstituted or substituted by unsubstituted or substituted aryl, heterocycle, C3-C6 cycloalkyl, C2-C6 alkenyl, R8O-, or -N(R8)2;
R2 is selected from: a) Cl-8 alkyl, unsubstituted or substituted with one or more of:
1) aryl or heterocycle, unsubstituted or substituted with: i) Cl-4 alkyl, ii) (CH2)pOR6, iii) (CH2)pNR6R7, iv) halogen, v) Cl-4 perfluoroalkyl, 2) OR6,
3) SR6, S0 R6, or
4) ^ NR6R7
O b)
Figure imgf000088_0001
c) aryl, unsubstituted or substituted with one or more of:
1) Ci-8 alkyl,
2) Ci-8 perfluoroalkyl,
3) OR6,
4) SR6, SO2R6, or
5) \ .NR6R7
O d) -SO2R6;
R3a and R3b are independently absent or selected from:
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted heteroaryl, unsubstituted or substituted aralkyl and unsubstituted or substituted heteroaralkyl;
R4 is independently selected from: a) hydrogen, b) Cl-C╬▓ alkyl, C2-C6 alkenyl, C2-C6 alkynyl, Ci-C6 perfluoroalkyl, F, Cl, R80-, R8C(0)NR8-, CN, N02, (R8)2N- C(NR8)-, R8C(0)-, R8OC(0)-, -N(R8)2, or R9╬╕C(0)NR8-, and c) C1-C6 alkyl substituted by Cl-C╬▓ perfluoroalkyl, R8O-, R8C(0)NR8-, (R8)2N-C(NR8)-, R╬▓c(O)-, R╬▓╬╕C(O)-, -N(R8)2, or R9OC(0)NR8-;
R5 is selected from: a) hydrogen, b) C2-C6 alkenyl, C2-C6 alkynyl, C3-C6 cycloalkyl, Ci-C╬▓ perfluoroalkyl, F, Cl, R80-, R9S(0)m-, R8C(0)NR8-, CN, NO2, (R8)2N-C(NR8)-, R8C(0)-, R8╬╕C(0)-, -N(R8)2J or R90C(0)NR8-, and c) Cl-C╬▓ alkyl unsubstituted or substituted by Ci-C╬▓ perfluoroalkyl, F, Cl, R80-, R9S(0)m-, R8C(0)NR8-, CN, (R8)2N-C(NR8)-, R8C(0)-, R8╬╕C(0)-, -N(R8)2, or R90C(0)NR8-;
R6, R7 and R ' a are independently selected from: H; Cl-4 alkyl, C3-6 cycloalkyl, aryl, heterocycle, unsubstituted or substituted with: a) Cl-4 alkoxy, b) halogen, or c) substituted or unsubstituted aryl or substituted or unsubstituted heterocycle;
R8 is independently selected from hydrogen, Ci-C╬▓ alkyl, benzyl, 2,2,2- trifluoroethyl and aryl;
R9 is independently selected from Ci-C╬▓ alkyl and aryl;
RIO is selected from: H; R8C(0)-; R9S(0) -; unsubstituted or substituted Cl-4 alkyl, unsubstituted or substituted C3-6 cycloalkyl, unsubstituted or substituted heterocycle, unsubstituted or substituted aryl, substituted aroyl, unsubstituted or substituted heteroaroyl, substituted arylsulfonyl, unsubstituted or substituted heteroarylsulfonyl, wherein the substituted group is substituted with one or two substituents selected from: a) Ci-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO,
╬▓)
O
ORfc f)
O
g) - S(0)mR
Figure imgf000091_0001
i) C3-6 cycloalkyl;
RU is selected from
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted aralkyl, unsubstituted or substituted heteroaryl and unsubstituted or substituted heteroaralkyl;
A and A-2 are independently selected from: a bond, -CH=CH-, -C=C-,
-C(O)-, -C(0)NR8-, O, -N(R8)-, or S(0)m;
J and K are independently selected from N or CHy;
V is selected from: a) heterocycle selected from pyrrolidinyl, imidazolinyl, pyridinyl, thiazolyl, oxazolyl, indolyl, quinolinyl, isoquinolinyl, triazolyl and thienyl, and b) aryl;
W is a heterocycle selected from pyrrolidinyl, triazolyl, imidazolyl, pyridinyl, thiazolyl, indolyl, quinolinyl, or isoquinolinyl;
X is a bond, -C(=0)NR10-, -NRl0C(=O)-, -S(0)m- or -NRlO-j
Figure imgf000091_0002
n is 0, 1, 2, 3 or 4; p is 1, 2 or 3; q is O or 1; r is 0 to 5, provided that r is 0 when V is hydrogen; s is l or 2; t is 1; and y is l or 2; the dashed lines represent optional double bonds;
or an optical isomer or pharmaceutically acceptable salt thereof.
3. The compound according to Claim 1, which inhibits farnesyl-protein transferase, of the formula C:
Figure imgf000092_0001
V - A1(CR1 a 2)nA2(CR1 a 2)n
Figure imgf000092_0002
wherein:
Rla and Rlc are independently selected from: hydrogen, C3-C10 cycloalkyl, R8O-, -N(R8)2, F or Ci-C╬▓ alkyl;
Rib is independently selected from: a) hydrogen, b) unsubstituted or substituted aryl, unsubstituted or substituted heterocycle, C3-C6 cycloalkyl, R8O-, -N(R8)2 or C2-C6 alkenyl, c) C1-C6 alkyl unsubstituted or substituted by unsubstituted or substituted aryl, heterocycle, C3-C6 cycloalkyl, C2-C╬▓ alkenyl, R8O-, or -N(R8)2;
R2 is selected from: a) Cl-8 alkyl, unsubstituted or substituted with one or more of: 1) aryl or heterocycle, unsubstituted or substituted with: i) Cl-4 alkyl, ii) (CH2)pOR6 iii) (CH2)pNR6R7, iv) halogen, v) Cl-4 perfluoroalkyl,
2) OR6,
3) SR6, S02R6, or
4) ^ NR6R7
O b)
Figure imgf000093_0001
c) aryl, unsubstituted or substituted with one or more of:
1) Cl-8 alkyl,
2) Cl-8 perfluoroalkyl,
3) OR6,
4) SR6, SO2R6, or
5) \ . NR6R7
O d) -S02R6;
R3a and R3b are independently absent or selected from:
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted heteroaryl, unsubstituted or substituted aralkyl and unsubstituted or substituted heteroaralkyl;
R4 is independently selected from: a) hydrogen, b) Ci-C╬▓ alkyl, C2-C6 alkenyl, C2-C6 alkynyl, Ci-C╬▓ perfluoroalkyl, F, Cl, R80-, RSC(0)NR8-, CN, N02, (R8)2N- C(NR8)-, R8C(0)-, R8╬╕C(0)-, -N(R8)2, or R9╬╕C(0)NR8-, and c) C1-C6 alkyl substituted by C1-C6 perfluoroalkyl, R8O-, R8C(0)NR8-, (R8)2N-C(NR8)-, R8C(0)-, R8╬╕C(0)-, -N(R8)2, or R90C(0)NR8-;
R5 is selected from: a) hydrogen, b) C2-C6 alkenyl, C2-C╬▓ alkynyl, C3-C6 cycloalkyl, Ci-C╬▓ perfluoroalkyl, F, Cl, R80-, R9S(0)m-, R8C(0)NR8-, CN, N0 , (R8)2N-C(NR8)-, R8C(0)-, R8OC(0)-, -N(R8)2, or
R9╬╕C(0)NR8-, and c) C1-C6 alkyl unsubstituted or substituted by Ci-C╬▓ perfluoroalkyl, F, Cl, R80-, R9s(0)m-, R8C(0)NR8-, CN,
(R8)2N-C(NR8)-, R8C(0)-, R8OC(0)-, -N(R8)2J or R90C(0)NR8-;
R6, R7 and R7a are independently selected from: H; Cl-4 alkyl, C3-6 cycloalkyl, aryl, heterocycle, unsubstituted or substituted with: a) Cl-4 alkoxy, b) halogen, or c) substituted or unsubstituted aryl or substituted or unsubstituted heterocycle;
R8 is independently selected from hydrogen, C1-C6 alkyl, benzyl, 2,2,2- trifluoroethyl and aryl;
R9 is independently selected from C1-C6 alkyl and aryl;
RlO is selected from: H; R8C(0)-; R9S(0)m-; unsubstituted or substituted Cl-4 alkyl, unsubstituted or substituted C3-6 cycloalkyl, unsubstituted or substituted heterocycle, unsubstituted or substituted aryl, substituted aroyl, unsubstituted or substituted heteroaroyl, substituted arylsulfonyl, unsubstituted or substituted heteroarylsulfonyl, wherein the substituted group is substituted with one or two substituents selected from: a) Cl-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO,
Rfc e)
O
OR8 f) O
g) -S(0)mR9
Figure imgf000095_0001
i) C3-6 cycloalkyl;
RU is selected from
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted aralkyl, unsubstituted or substituted heteroaryl and unsubstituted or substituted heteroaralkyl;
Al and A-2 are independently selected from: a bond, -CH=CH-, -C=C-, -C(O)-, -C(0)NR8-, O, -N(R8)-, or S(0)m;
V is selected from: a) heterocycle selected from pyrrolidinyl, imidazolinyl, pyridinyl, thiazolyl, oxazolyl, indolyl, quinolinyl, isoquinolinyl, triazolyl and thienyl; and b) aryl; W is a heterocycle selected from pyrrolidinyl, triazolyl, imidazolyl, pyridinyl, thiazolyl, indolyl, quinolinyl, or isoquinolinyl;
X is a bond, -C(=0)NRl┬░-, -NR10C(=O)-, -S(0)m- or -NR10-;
Figure imgf000096_0001
p is 1, 2 or 3; q is O or 1; r is 0 to 5, provided that r is 0 when V is hydrogen; s is 1 or 2; and t is 1;
the dashed lines represent optional double bonds;
or an optical isomer or pharmaceutically acceptable salt thereof.
4. The compound according to Claim 1, which inhibits farnesyl-protein transferase, of the formula D:
Figure imgf000096_0002
D wherein:
Rla and Rlc are independently selected from: hydrogen, C3-C10 cycloalkyl, R80-, -N(R8)2, F or Cl-C╬▓ alkyl;
Ri is independently selected from: a) hydrogen, b) aryl, heterocycle, C3-C10 cycloalkyl, R8O-, -N(R8)2, F or C2- CQ alkenyl, c) unsubstituted or substituted Ci-C╬▓ alkyl wherein the substituent on the substituted Cl-C╬▓ alkyl is selected from unsubstituted or substituted aryl, heterocycle, C3-C10 cycloalkyl, C2-C6 alkenyl, R8O- and -N(R8)2;
R2 is selected from: H; unsubstituted or substituted Cl-8 alkyl, unsubstituted or substituted C2-8 alkenyl, unsubstituted or substituted aryl,
Figure imgf000097_0001
unsubstituted or substituted heterocycle, O ' O and
S(0)2R6 in the substituted group is substituted with one or more of:
1) aryl or heterocycle, unsubstituted or substituted with one or two groups selected from: a) Cl-4 alkyl, b) (CH2)pOR6, c) (CH2)pNR6R7, d) halogen, e) Cl-4 perfluoroalkyl,
2) C3-6 cycloalkyl,
3) OR6,
4) SR6, S(0)R6, SO2R6,
5) ΓÇö NR6R7
Figure imgf000097_0002
ΓÇö O^ . NR6R7
8) T 0
9) ΓÇö O. .OR6
Y 0
10) \ ^ NR6R7 0
11 ) ΓÇö S02- NR6R7
Figure imgf000098_0001
13)
-r 0 R6
Figure imgf000098_0002
15) Cl-8 alkyl, or
16) Cl-8 perfluoroalkyl;
R and R3 are independently absent or selected from:
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted heteroaryl, unsubstituted or substituted aralkyl and unsubstituted or substituted heteroaralkyl;
R4 is independently selected from: a) hydrogen, b) aryl, substituted aryl, heterocycle, substituted heterocycle,
Cl-C╬▓ alkyl, C2-C6 alkenyl, C2-C6 alkynyl, Cl-C╬▓ perfluoroalkyl, F, Cl, R80-, R8C(0)NR8-, CN, NO2, (R8)2N- C(NR8)-, R8C(0)-, -N(R8)2, or R9╬╕C(O)NR8-, and c) C1-C6 alkyl substituted by C1-C6 perfluoroalkyl, R8O-, R8C(O)NR8-, (R8)2N-C(NR8)-, R8c(O)-, -N(R8)2, or R9OC(O)NR8-;
R^a and R^b are independently hydrogen, C1-C6 alkyl, cyclopropyl, trifluoromethyl and halogen;
R6, R7 and R7a are independently selected from:
H; Cl-4 alkyl, C3-6 cycloalkyl, aryl, heterocycle, unsubstituted or substituted with: a) Cl-4 alkoxy, b) halogen, or c) substituted or unsubstituted aryl or substituted or unsubstituted heterocycle;
R8 is independently selected from hydrogen, C1-C6 alkyl, 2,2,2- trifluoroethyl, benzyl and aryl;
R9 is independently selected from Ci-C╬▓ alkyl and aryl;
RI is selected from: H; R8C(0)-; R9S(0) unsubstituted or substituted Cl-4 alkyl, unsubstituted or substituted C3-6 cycloalkyl, unsubstituted or substituted heterocycle, unsubstituted or substituted aryl, substituted aroyl, unsubstituted or substituted heteroaroyl, substituted arylsulfonyl, unsubstituted or substituted heteroarylsulfonyl, wherein the substituted group is substituted with one or two substituents selected from: a) Cl-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO, e) Ύ 0 R9
Figure imgf000100_0001
g) -S(0)mR9
Figure imgf000100_0002
i) C3-6 cycloalkyl;
RU is selected from
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted aralkyl, unsubstituted or substituted heteroaryl and unsubstituted or substituted heteroaralkyl;
Al and A-2 are independently selected from: a bond, -CH=CH-, -CΓëíC-, -C(O)-, -C(0)NR8-, O, -N(R8)-, or S(0)m;
J and K are independently selected from N or CHyj
V is selected from: a) hydrogen, b) heterocycle selected from pyrrolidinyl, imidazolinyl, pyridinyl, thiazolyl, oxazolyl, indolyl, quinolinyl, isoquinolinyl, triazolyl and thienyl, c) aryl, d) Cl-C20 alkyl wherein from 0 to 4 carbon atoms are replaced with a a heteroatom selected from O, S, and N, and e) C2-C2o alkenyl, and provided that V is not hydrogen if Al is S(0)m and V is not hydrogen if Al is a bond, n is 0 and A-2 is S(0) ; X is a bond, -C(=0)NR10-, -NRl0c(=O)-, -S(0)m- or -NRlO-
m is 0, 1 or 2; n is 0, 1, 2, 3 or 4;
Figure imgf000101_0001
q is O or 1; r is 0 to 5, provided that r is 0 when V is hydrogen; and y is l or 2;
the dashed lines represent optional double bonds;
or an optical isomer or pharmaceutically acceptable salt thereof.
5. The compound according to Claim 1, which inhibits farnesyl-protein transferase, of the formula E:
Figure imgf000101_0002
wherein:
Rla and Rlc are independently selected from: hydrogen, C3-C10 cycloalkyl, R8O-, -N(R8)2J F or C1-C6 alkyl;
Rib is independently selected from: a) hydrogen, b) aryl, heterocycle, C3-C10 cycloalkyl, R8O-, -N(R8)2, F or C2-
CQ alkenyl, c) unsubstituted or substituted C1-C6 alkyl wherein the substituent on the substituted C1-C6 alkyl is selected from unsubstituted or substituted aryl, heterocycle, C3-C10 cycloalkyl, C2-C6 alkenyl, R8O- and -N(R8)2;
R2 is selected from: H; unsubstituted or substituted Cl-8 alkyl, unsubstituted or substituted C2-8 alkenyl, unsubstituted or substituted aryl,
Figure imgf000102_0001
unsubstituted or substituted heterocycle, O ' O and -
S(0)2R6, wherein the substituted group is substituted with one or more of:
1) aryl or heterocycle, unsubstituted or substituted with one or two groups selected from: a) Cl-4 alkyl, b) (CH2)pOR6, c) (CH2)pNR R7, d) halogen, e) Cl-4 perfluoroalkyl,
2) C3-6 cycloalkyl,
3) OR6,
4) SR6, S(0)R6, SO2R6,
5) ΓÇö NR6R7
Figure imgf000102_0002
ΓÇö O^ . NR6R7
8) Y 0
9) ΓÇö O^/OR6
Y 0
10) \ ^ NR6R7 0
11) ΓÇö S02-NR6R7
Figure imgf000103_0001
15) Cl-8 alkyl, or
16) Cl-8 perfluoroalkyl;
R3a and R3b are independently absent or selected from:
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted heteroaryl, unsubstituted or substituted aralkyl and unsubstituted or substituted heteroaralkyl;
R4 is independently selected from: a) hydrogen, b) aryl, substituted aryl, heterocycle, substituted heterocycle,
Ci-C6 alkyl, C2-C6 alkenyl, C2-C6 alkynyl, Cl-C╬▓ perfluoroalkyl, F, Cl, R80-, R8c(0)NR8-, CN, NO2, (R8)2N- C(NR8)-, R8C(0)-, -N(R8)2, or R9╬╕C(0)NR8-, and c) C1-C6 alkyl substituted by Ci-C╬▓ perfluoroalkyl, R80-, R8C(0)NR8-, (R8)2N-C(NR8)-, R8c(0)-, -N(R8)2, or R9OC(0)NR8-;
R^ and R^b are independently hydrogen, Ci-C╬▓ alkyl, cyclopropyl, trifluorom ethyl and halogen;
R6, R7 and R7a are independently selected from:
H; Cl-4 alkyl, C3-6 cycloalkyl, aryl, heterocycle, unsubstituted or substituted with: a) Cl-4 alkoxy, b) halogen, or c) substituted or unsubstituted aryl or substituted or unsubstituted heterocycle;
R8 is independently selected from hydrogen, C1-C6 alkyl, 2,2,2- trifluoroethyl, benzyl and aryl;
R9 is independently selected from C1-C6 alkyl and aryl;
R is selected from: H; R8C(0)-; R9S(0)m unsubstituted or substituted C╬╣_4 alkyl, unsubstituted or substituted C3-6 cycloalkyl, unsubstituted or substituted heterocycle, unsubstituted or substituted aryl, substituted aroyl, unsubstituted or substituted heteroaroyl, substituted arylsulfonyl, unsubstituted or substituted heteroarylsulfonyl, wherein the substituted group is substituted with one or two substituents selected from: a) Cl-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO,
Figure imgf000105_0001
OR£ f)
O
g) -S(0)mR
h) N(R8)2, or i) C3-6 cycloalkyl;
RU is selected from
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted aralkyl, unsubstituted or substituted heteroaryl and unsubstituted or substituted heteroaralkyl;
Al and A2 are independently selected from: a bond, -CH=CH-, -CΓëíC-, -C(O)-, -C(0)NR8-, O, -N(R8)-, or S(0)m;
V is selected from: a) hydrogen, b) heterocycle selected from pyrrolidinyl, imidazolinyl, pyridinyl, thiazolyl, oxazolyl, indolyl, quinolinyl, isoquinolinyl, triazolyl and thienyl, c) aryl, d) C1-C20 alkyl wherein from 0 to 4 carbon atoms are replaced with a a heteroatom selected from O, S, and N, and e) C2-C20 alkenyl, and provided that V is not hydrogen if A is S(0)m and V is not hydrogen if Al is a bond, n is 0 and A2 is S(0)m;
X is a bond, -C(=O)NRl0-, -NRl┬░C(=0)-, -S(0)m- or -NRlO.j m is 0, 1 or 2; n is 0, 1, 2, 3 or 4; p is 0, 1, 2, 3 or 4; q is 0 or 1; and r is 0 to 5, provided that r is 0 when V is hydrogen;
the dashed lines represent optional double bonds;
or an optical isomer or pharmaceutically acceptable salt thereof.
6. The compound according to Claim 5, which inhibits farnesyl-protein transferase, of the formula F:
Figure imgf000106_0001
wherein:
Rla and Rlc are independently selected from: hydrogen, C3-C10 cycloalkyl or C1-C6 alkyl;
Rib is independently selected from: a) hydrogen, b) aryl, heterocycle, C3-C10 cycloalkyl, R80-, -N(R8)2, F or C2- C╬▓ alkenyl, c) C1-C6 alkyl unsubstituted or substituted by aryl, heterocycle, C3-C10 cycloalkyl, C2-C6 alkenyl, R80-, or -
N(R8)2; R2 is selected from: H; unsubstituted or substituted Cl-8 alkyl,
Figure imgf000107_0001
unsubstituted or substituted aryl, O ' O ancy -S(0)2R6, wherein the substituted group is substituted with one or more of:
1) aryl or heterocycle, unsubstituted or substituted with one or two groups selected from: a) Cl-4 alkyl, b) (CH2)pOR6, c) (CH2)PNR6R7, d) halogen, e) Cl-4 perfluoroalkyl,
2) C3-6 cycloalkyl,
3) OR6,
4) SR6, S(0)R6, SO2R6,
NR 6┬░DR7
5)
Figure imgf000107_0002
ΓÇö O. . NR6R7
8) Y 0
9) ΓÇö O^/OR6
Y 0
10) \ . NR6R7 0
11 ) ΓÇö S02- NR6R7
Figure imgf000108_0001
13)
AT
0
14)
^r 0 0R╬┤
15) Cl -8 alkyl, or
18) Cl -8 perfluoroalkyl
R3a is selected from:
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted heteroaryl, unsubstituted or substituted aralkyl and unsubstituted or substituted heteroaralkyl;
R4 is independently selected from: a) hydrogen, b) aryl, substituted aryl, heterocycle, substituted heterocycle,
Ci-C╬▓ alkyl, C2-C6 alkenyl, C2-C6 alkynyl, Ci -C╬▓ perfluoroalkyl, F, Cl, R80-, R8C(0)NR8-, CN, N02, (R8)2N- C(NR8)-, RSC(O)-, -N(R8)2, or R9OC(O)NR8-, and c) Cl-C╬▓ alkyl substituted by Ci-C╬▓ perfluoroalkyl, R80-, R8C(0)NR8-, (R8)2N-C(NR8)-, R8C(0)-, -N(R8)2, or R9OC(0)NR8-;
R^a and R^ are independently hydrogen, ethyl, cyclopropyl or methyl;
R6, R ' and R ' a are independently selected from:
H; Ci-4 alkyl, C3-6 cycloalkyl, aryl, heterocycle, unsubstituted or substituted with: a) Cl-4 alkoxy, b) halogen, or c) substituted or unsubstituted aryl or substituted or unsubstituted heterocycle;
R8 is independently selected from hydrogen, Ci-C╬▓ alkyl, 2,2,2- trifluoroethyl, benzyl and aryl;
R9 is independently selected from C1-C6 alkyl and aryl;
Rl0 is selected from: H; R8C(0)-; R9S(0)m-; unsubstituted or substituted Cl-4 alkyl, wherein the substituted alkyl group is substituted with one or two substituents selected from: a) Cl-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO,
R' e)
O
OR8 f) O g) -S(0)mR9 h) N(R8)2, or i) C3-6 cycloalkyl;
RU is selected from
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted aralkyl, unsubstituted or substituted heteroaryl and unsubstituted or substituted heteroaralkyl;
Al is selected from: a bond, -C(O)-, O, -N(R8)-, or S(0)m;
X is a bond, -C(=0)NR10-, -NR10C(=O)-, -S(0)m- or -NRlO-;
n is 0 or 1; provided that n is not 0 if Al is a bond, O, -N(R8)-, or
S(0)m; m is 0, 1 or 2; p is 0, 1, 2, 3 or 4; r is 1 or 2; and q is 0 or 1;
or an optical isomer or pharmaceutically acceptable salt thereof.
7. The compound according to Claim 1, which inhibits farnesyl-protein transferase, of the formula G:
Figure imgf000110_0001
wherein:
Rla and Rlc are independently selected from: hydrogen, R80-, -N(R8)2, F, C3-C10 cycloalkyl or Ci-C╬▓ alkyl;
Rib is independently selected from: a) hydrogen, b) aryl, heterocycle, C3-C10 cycloalkyl, R80-, -N(R8)2, F or C2- C╬▓ alkenyl, c) C -CQ alkyl unsubstituted or substituted by aryl, heterocycle, C3-C10 cycloalkyl, C2-C6 alkenyl, R8O-, or - N(R8)2;
R2 is selected from: H; unsubstituted or substituted Cl-8 alkyl,
Figure imgf000111_0001
unsubstituted or substituted aryl, O ' O and -S(0)2R6, wherein the substituted group is substituted with one or more of:
1) aryl or heterocycle, unsubstituted or substituted with one or two groups selected from: a) Cl-4 alkyl, b) (CH2)pOR6, c) (CH2)pNR6R7, d) halogen, e) Cl-4 perfluoroalkyl,
2) C3-6 cycloalkyl, 3) OR6,
4) SR6, S(0)R6, S02R6,
5) ΓÇö NR6R7
Figure imgf000112_0001
8) -O╬│NR^R7
O
9) ΓÇö O^ ^OR6
Y O
10) \^NR6R7
O
11) ΓÇö S02-NR6R7
Figure imgf000112_0002
13) ~ΎR6
O
14) " OR6 o
15) Cl-8 alkyl, or
16) Cl-8 perfluoroalkyl;
R3a is selected from: H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted heteroaryl, unsubstituted or substituted aralkyl and unsubstituted or substituted heteroaralkyl;
R4 is independently selected from: a) hydrogen, b) aryl, substituted aryl, heterocycle, substituted heterocycle, Ci-C╬▓ alkyl, C2-C6 alkenyl, C2-C6 alkynyl, C╬╣-C6 perfluoroalkyl, F, Cl, R80-, R8C(0)NR8-, CN, N02, (R8)2N-
C(NR8)-, R8C(0)-, -N(R8)2, or R9OC(0)NR8-, and c) Cl-C6 alkyl substituted by Ci-C╬▓ perfluoroalkyl, R80-, R8C(0)NR8-, (R8)2N-C(NR8)-, R8C(0)-, -N(R8)2, or R9OC(0)NR8-;
R^a and R^b are independently hydrogen, ethyl, cyclopropyl or methyl;
R6, R7 and R7a are independently selected from:
H; Ci_4 alkyl, C3-6 cycloalkyl, aryl, heterocycle, unsubstituted or substituted with: a) Ci-4 alkoxy, b) halogen, or c) substituted or unsubstituted aryl or substituted or unsubstituted heterocycle;
R8 is independently selected from hydrogen, C1-C6 alkyl, 2,2,2- trifluoroethyl, benzyl and aryl;
R9 is independently selected from C -CQ alkyl and aryl;
Rl is selected from: H; R8C(0)-; R S(0)m unsubstituted or substituted Cl-4 alkyl, wherein the substituted alkyl group is substituted with one or two substituents selected from: a) Cl-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO,
Figure imgf000114_0001
g) Γûá - S(0)mR9
h) N(R8)2, or i) C3-6 cycloalkyl;
RU is selected from H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted aralkyl, unsubstituted or substituted heteroaryl and unsubstituted or substituted heteroaralkyl; X is a bond, -C(=O)NRl0-, -NRl┬░C(=0)-, -S(0)m- or -NR10-;
n is O or l; m is 0, 1 or 2; p is 0, 1, 2, 3 or 4, provided that p is not 0 if X is a bond, -NR8- or
0; q is 0 or 1; and r is l or 2; or an optical isomer or pharmaceutically acceptable salt thereof.
8. The compound according to Claim 6, which inhibits farnesyl-protein transferase, of the formula H:
Figure imgf000115_0001
wherein:
Rla and Rlc are independently selected from: hydrogen, C3-C10 cycloalkyl or Cl-C╬▓ alkyl;
Rib is independently selected from: a) hydrogen, b) aryl, heterocycle, C3-C10 cycloalkyl, R80-, -N(R8)2 or F, c) Ci-C╬▓ alkyl unsubstituted or substituted by aryl, heterocycle, C3-C10 cycloalkyl, R80-, or -N(R8)2;
R2 is selected from: H; unsubstituted or substituted Cl-8 alkyl,
Figure imgf000115_0002
unsubstituted or substituted aryl, O ' O and -S(0)2R6, wherein the substituted group is substituted with one or more of:
1) aryl or heterocycle, unsubstituted or substituted with one or two groups selected from: a) Cl-4 alkyl, b) (CH2)pOR6 c) (CH2)pNR6R7, d) halogen, e) C╬╣_4 perfluoroalkyl,
2) C3-6 cycloalkyl,
3) OR6, 4) SR6, S(0)R6, SO2R6, 5) ΓÇö NR6R7
Figure imgf000116_0001
ΓÇö 0^/NR6R7
8) Y 0
9) ΓÇö O. .OR6
Y 0
10) \ ,NR6R7 0
11) ΓÇö S02-NR6R7
Figure imgf000116_0002
13)
-r 0 R6
14) τ 00R6
15) Cl-8 alkyl, or
16) Cl-8 perfluoroalkyl;
R3a i selected from: H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted heteroaryl, unsubstituted or substituted aralkyl and unsubstituted or substituted heteroaralkyl;
R^a and R^b are independently hydrogen, ethyl, cyclopropyl or methyl;
R6, R7 and R7a are independently selected from:
H; Cl-4 alkyl, C3-6 cycloalkyl, aryl, heterocycle, unsubstituted or substituted with: a) Cl-4 alkoxy, b) halogen, or c) substituted or unsubstituted aryl or substituted or unsubstituted heterocycle;
R8 is independently selected from hydrogen, C1-C6 alkyl, 2,2,2- trifluoroethyl, benzyl and aryl;
R9 is independently selected from C1-C6 alkyl and aryl;
RlO is selected from: H; R8C(0)-; R9S(0) -; unsubstituted or substituted Cl-4 alkyl, wherein the substituted alkyl group is substituted with one or two substituents selected from: a) Cl-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO,
R e)
O
OR* f)
O g) -S(0)mR h) N(R8)2, or i) C3-6 cycloalkyl;
RU is selected from
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted aralkyl, unsubstituted or substituted heteroaryl and unsubstituted or substituted heteroaralkyl;
X is a bond, -C(=0)NRl┬░-, -NRl┬░C(=0)-, -S(0)m- or -NRlO-;
m is 0, 1 or 2; p is 0, 1, 2, 3 or 4; q is 0 or 1; and
or an optical isomer or pharmaceutically acceptable salt thereof.
9. The compound according to Claim 7, which inhibits farnesyl-protein transferase, of the formula I:
1
Figure imgf000118_0001
wherein:
Rla and Rlc are independently selected from: hydrogen, R80-, -N(R8)2, F, C3-C10 cycloalkyl or C1-C6 alkyl; Rib is independently selected from: a) hydrogen, b) aryl, heterocycle or C3-C10 cycloalkyl, c) Ci-C╬▓ alkyl unsubstituted or substituted by aryl, heterocycle, C3-C10 cycloalkyl, C2-C6 alkenyl, R8O-, or N(R8)2;
R2 is selected from: H; unsubstituted or substituted Cl-8 alkyl,
Figure imgf000119_0001
unsubstituted or substituted aryl, O ' O an(j -S(0)2R6, wherein the substituted group is substituted with one or more of:
1) aryl or heterocycle, unsubstituted or substituted with one or two groups selected from: a) Cl-4 alkyl,
Figure imgf000119_0002
d) halogen, e) Cl-4 perfluoroalkyl,
2) C3-6 cycloalkyl,
3) OR6, 4) SR6, S(0)R6, SO2R6,
6D7
5) NRbR
Figure imgf000119_0003
ΓÇö O^ . NR6R7
8) Y 0
9) ΓÇö O. .OR6
Y 0
10) \ ^ NR6R7 0
1 1 ) ΓÇö S02- NR6R7
Figure imgf000120_0001
13)
-z 0-R6
14)
-r 0 0R6
15) Cl-8 alkyl, or
16) Cl-8 perfluoroalkyl;
R3a i selected from:
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted heteroaryl, unsubstituted or substituted aralkyl and unsubstituted or substituted heteroaralkyl;
R^ and R^b are independently hydrogen, ethyl, cyclopropyl or methyl;
R6, R7 and R7a are independently selected from:
H; Cl-4 alkyl, C3-6 cycloalkyl, aryl, heterocycle, unsubstituted or substituted with: a) Ci-4 alkoxy, b) halogen, or c) substituted or unsubstituted aryl or substituted or unsubstituted heterocycle;
R8 is independently selected from hydrogen, Ci-C╬▓ alkyl, 2,2,2- trifluoroethyl, benzyl and aryl;
R is independently selected from Ci-C╬▓ alkyl and aryl;
Rl is selected from: H; R8C(0)-; R9S(0)m unsubstituted or substituted Ci-4 alkyl, wherein the substituted alkyl group is substituted with one or two substituents selected from: a) Cl-4 alkoxy, b) aryl or heterocycle, c) halogen, d) HO,
Rfc e)
O
ORfc f)
O
g) - S(0)mR
h) N(R8)2, or i) C3-6 cycloalkyl;
RU is selected from
H, unsubstituted or substituted alkyl, unsubstituted or substituted aryl, unsubstituted or substituted aralkyl, unsubstituted or substituted heteroaryl and unsubstituted or substituted heteroaralkyl; Al is selected from: a bond, -C(O)-, O, -N(R8)-, or S(0)m;
X is a bond, -C(=O)NRl0-, -NRl0C(=O)-, -S(0)m- or -NR10-;
m is 0, 1 or 2; n is O or l; p is 1, 2 or 3; and q is O or l;
or an optical isomer or pharmaceutically acceptable salt thereof.
10. A compound which inhibits farnesyl-protein transferase which is:
Figure imgf000122_0001
4-phenyl-4,5,6,7-tetrahydro-lH-imidazo[4,5] pyridine-6(S)-carboxylic acid {2-[3-(4-cyano-benzyl)-3H -imidazol-4-yl]-ethyl}-amide;
or an optical isomer or pharmaceutically acceptable salt thereof.
11. A pharmaceutical composition comprising a pharmaceutical carrier, and dispersed therein, a therapeutically effective amount of a compound of Claim 1.
12. A pharmaceutical composition comprising a pharmaceutical carrier, and dispersed therein, a therapeutically effective amount of a compound of Claim 3.
13. A pharmaceutical composition comprising a pharmaceutical carrier, and dispersed therein, a therapeutically effective amount of a compound of Claim 4.
14. A pharmaceutical composition comprising a pharmaceutical carrier, and dispersed therein, a therapeutically effective amount of a compound of Claim 5.
15. A pharmaceutical composition comprising a pharmaceutical carrier, and dispersed therein, a therapeutically effective amount of a compound of Claim 10.
16. A method for inhibiting farnesyl-protein transferase which comprises administering to a mammal in need thereof a therapeutically effective amount of a composition of Claim 11.
17. A method for inhibiting farnesyl-protein transferase which comprises administering to a mammal in need thereof a therapeutically effective amount of a composition of Claim 12.
18. A method for inhibiting farnesyl-protein transferase which comprises administering to a mammal in need thereof a therapeutically effective amount of a composition of Claim 13.
19. A method for inhibiting farnesyl-protein transferase which comprises administering to a mammal in need thereof a therapeutically effective amount of a composition of Claim 14.
20. A method for inhibiting farnesyl-protein transferase which comprises administering to a mammal in need thereof a therapeutically effective amount of a composition of Claim 15.
21. A method for treating cancer which comprises administering to a mammal in need thereof a therapeutically effective amount of a composition of Claim 11.
22. A method for treating cancer which comprises administering to a mammal in need thereof a therapeutically effective amount of a composition of Claim 12.
23. A method for treating cancer which comprises administering to a mammal in need thereof a therapeutically effective amount of a composition of Claim 13.
24. A method for treating cancer which comprises administering to a mammal in need thereof a therapeutically effective amount of a composition of Claim 14.
25. A method for treating cancer which comprises administering to a mammal in need thereof a therapeutically effective amount of a composition of Claim 15.
26. A method for treating neurofibromin benign proliferative disorder which comprises administering to a mammal in need thereof a therapeutically effective amount of a composition of Claim 11.
27. A method for treating blindness related to retinal vascularization which comprises administering to a mammal in need thereof a therapeutically effective amount of a composition of Claim 11.
28. A method for treating infections from hepatitis delta and related viruses which comprises administering to a mammal in need thereof a therapeutically effective amount of a composition of Claim 11.
29. A method for preventing restenosis which comprises administering to a mammal in need thereof a therapeutically effective amount of a composition of Claim 11.
30. A method for treating polycystic kidney disease which comprises administering to a mammal in need thereof a therapeutically effective amount of a composition of Claim 11.
31. A pharmaceutical composition made by combining the compound of Claim 1 and a pharmaceutically acceptable carrier.
32. A process for making a pharmaceutical composition comprising combining a compound of Claim 1 and a pharmaceutically acceptable carrier.
PCT/US1998/025325 1997-12-04 1998-11-30 Inhibitors of farnesyl-protein transferase WO1999027928A1 (en)

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US6903085B1 (en) 1999-08-24 2005-06-07 Astrazeneca, Ab Substituted piperidine compounds useful as modulators of chemokine receptor activity
US6958350B2 (en) 2001-02-19 2005-10-25 Astrazeneca Ab Chemical compounds
US6960602B2 (en) 2001-03-22 2005-11-01 Astrazeneca Ab Piperidine derivatives as modulators of chemokine receptors
US7192973B2 (en) 2001-11-15 2007-03-20 Astrazeneca Ab Piperidine derivatives and their use as modulators of chemokine receptor activity (especially CCR5)
US7211595B2 (en) 2000-11-30 2007-05-01 Abbott Laboratories Farnesyltransferase inhibitors
US7294636B2 (en) 2003-05-09 2007-11-13 Astrazeneca Ab Chemical compounds

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AU703203B2 (en) * 1996-01-30 1999-03-18 Merck & Co., Inc. Inhibitors of farnesyl-protein transferase
EP0891360A4 (en) * 1996-04-03 2002-05-15 Merck & Co Inc Inhibitors of farnesyl-protein transferase
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Cited By (8)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6903085B1 (en) 1999-08-24 2005-06-07 Astrazeneca, Ab Substituted piperidine compounds useful as modulators of chemokine receptor activity
US7211595B2 (en) 2000-11-30 2007-05-01 Abbott Laboratories Farnesyltransferase inhibitors
US7323570B2 (en) 2000-11-30 2008-01-29 Abbott Laboratories Farnesyltransferase inhibitors
US6958350B2 (en) 2001-02-19 2005-10-25 Astrazeneca Ab Chemical compounds
US6960602B2 (en) 2001-03-22 2005-11-01 Astrazeneca Ab Piperidine derivatives as modulators of chemokine receptors
US7192973B2 (en) 2001-11-15 2007-03-20 Astrazeneca Ab Piperidine derivatives and their use as modulators of chemokine receptor activity (especially CCR5)
US6706888B2 (en) 2002-02-08 2004-03-16 Yuhan Corporation Processes for preparing imidazole derivatives and salts thereof
US7294636B2 (en) 2003-05-09 2007-11-13 Astrazeneca Ab Chemical compounds

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CA2311921A1 (en) 1999-06-10

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