US9540632B2 - Method and device for plankton separation - Google Patents
Method and device for plankton separation Download PDFInfo
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- US9540632B2 US9540632B2 US14/615,110 US201514615110A US9540632B2 US 9540632 B2 US9540632 B2 US 9540632B2 US 201514615110 A US201514615110 A US 201514615110A US 9540632 B2 US9540632 B2 US 9540632B2
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- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N13/00—Treatment of microorganisms or enzymes with electrical or wave energy, e.g. magnetism, sonic waves
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12M—APPARATUS FOR ENZYMOLOGY OR MICROBIOLOGY; APPARATUS FOR CULTURING MICROORGANISMS FOR PRODUCING BIOMASS, FOR GROWING CELLS OR FOR OBTAINING FERMENTATION OR METABOLIC PRODUCTS, i.e. BIOREACTORS OR FERMENTERS
- C12M47/00—Means for after-treatment of the produced biomass or of the fermentation or metabolic products, e.g. storage of biomass
- C12M47/02—Separating microorganisms from the culture medium; Concentration of biomass
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N1/00—Microorganisms, e.g. protozoa; Compositions thereof; Processes of propagating, maintaining or preserving microorganisms or compositions thereof; Processes of preparing or isolating a composition containing a microorganism; Culture media therefor
- C12N1/02—Separating microorganisms from their culture media
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N1/00—Microorganisms, e.g. protozoa; Compositions thereof; Processes of propagating, maintaining or preserving microorganisms or compositions thereof; Processes of preparing or isolating a composition containing a microorganism; Culture media therefor
- C12N1/10—Protozoa; Culture media therefor
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N1/00—Microorganisms, e.g. protozoa; Compositions thereof; Processes of propagating, maintaining or preserving microorganisms or compositions thereof; Processes of preparing or isolating a composition containing a microorganism; Culture media therefor
- C12N1/12—Unicellular algae; Culture media therefor
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- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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Definitions
- algae, bacteria and other organisms create health hazards for humans and animals through the production of toxins or bioactive compounds and/or cause deterioration of water quality from production of high biomass.
- toxins in recreational and drinking water can produce many deleterious effects in humans, including but not limited to fever, headache, muscle and joint pain, blisters, stomach cramps, diarrhea, vomiting, mouth ulcers and allergic reactions.
- seizures, liver failure and respiratory arrest may occur. Therefore, increased occurrence of these organisms and resultant problems is of great concern.
- Improving monitoring techniques for surveillance programs and ecological risk assessments would aid in determining how best to manage these aquatic ecosystems, thus, helping to ensure that the waterways are properly managed to maintain their aesthetic, economic, ecological and recreational value.
- the methods and devices of the invention allow the researcher to collect and separate plankton samples for surveillance programs and ecological risk assessments.
- Fast, easy and cost effective methods and devices are described herein that overcome existing limitations associated with the collection, separation and analysis of samples from waterways.
- limitations can include, for example, spatial and temporal variability, toxigenicity, and varying sample quality.
- Methods, devices (e.g., apparatuses) and kits for separating a plankton sample into its component parts utilizing phototactic behavior are described.
- the methods and devices of the claimed invention provide the conditions necessary to initiate, direct and reinforce the movement (e.g., migration) of zooplankton away from phytoplankton in a sample, for use in research requiring separation of plankton samples, for example, to provide measures of phytoplankton and zooplankton biomass.
- the separated plankton samples can yield measures of biomass in different trophic levels.
- a plankton separating device comprising: a darkened chamber and a collection cartridge (e.g., tube) attached to the chamber for allowing entry of highly directional ambient light, wherein the collection tube is of sufficient length to reinforce migration of the zooplankton, thereby separating the plankton into its component parts.
- a collection cartridge e.g., tube
- a plankton separating device comprising: a darkened chamber having at least one port, wherein the port has a closure; and a collection tube attached to the port of the chamber for allowing entry of highly directional ambient light, wherein the collection tube is of sufficient length to reinforce migration of the zooplankton, thereby separating the plankton into its component parts.
- the closure is a stopper or valve.
- the darkened chamber can be configured to be positioned above the transparent collection tube for operation.
- the darkened chamber can have an outer perimeter surrounding a central axis.
- the collection tube can be elongate and extend from the darkened chamber along the central axis, starting beyond a point that makes about a 48° angle to the central axis while extending to the nearest location of maximum outer perimeter dimension of the darkened chamber. This can form a contrast shadow relative to the transparent collection tube, simulating a predator to the zooplankton, minimizing the likelihood that zooplankton that have migrated into the collection tube will migrate back into the darkened chamber. In this way, the zooplankton migration into the tube can be reinforced. Therefore, the collection tube should be of sufficient length to reinforce this negative contrast orientation, and, thus, migration of the zooplankton.
- the collection tube can be transparent and can have one of tapered or straight side walls.
- the outer perimeter of the darkened chamber and the side walls of the transparent collection tube can be generally round.
- the transparent collection tube can extend away from the darkened chamber beyond a point that makes about a 20° ⁇ 2° angle to the central axis while extending to the nearest location of maximum outer perimeter dimension of the darkened chamber.
- the about 20° angle can continue to form a contrast shadow relative to the transparent collection tube that simulates a predator to plankton.
- At least about 40% of the length of the transparent collection tube can extend beyond the point that makes the about a 20° angle.
- the darkened chamber and the transparent collection tube can have outer diameters with a darkened chamber OD b to transparent collection tube OD t ratio of about 3-3.5 to 1.
- the transparent collection tube can have a length with a transparent collection tube length to OD t ratio of about 3.9-5.2 to 1. These ratios can provide a contrast shadow relative to the transparent collection tube, simulating a predator to zooplankton, and sufficient length in the transparent collection tube for zooplankton to migrate and move away from the darkened chamber to minimize zooplankton collected in the transparent collection tube from migrating back into the darkened chamber.
- the device and methods can utilize ambient light and are able to be used in situ. In other words, the devices and methods do not require the use of a light source other than ambient light (e.g., bulb, LED or other illumination). Thus, in some embodiments, the light is ambient. In some embodiments, the device does not include an artificial light source or filter. In some embodiments the device comprises a reflective surface, such as a mirror or foil. In some embodiments, the level of introduced light must be of a sufficient level to initiate positive phototactic movement of the zooplankton to the fluid-filled collection tube. In one aspect, the change in light intensity is sudden. In some embodiments, the stimulus beam of light can be approximately 2 cm, e.g., 21.5 nm or 20 mm.
- the collection tube comprises (e.g., is filled with) a fluid, preferably water, such as filtered water, e.g., in situ filtered water.
- a fluid preferably water, such as filtered water, e.g., in situ filtered water.
- the diluent is in situ filtered water to maintain thermal and chemical equilibrium of the environment for the zooplankton.
- the collection tube is transparent, i.e., entirely transparent. In another embodiment, most (for example, approximately at least 85%, e.g., at least 90%, e.g., at least 95%) or all of the tube is transparent, and the remainder of the tube is translucent or opaque. In another embodiment, most (for example, approximately at least 85%, e.g., at least 90%, e.g., at least 95%) or all of the tube is translucent.
- the darkened chamber can have a capacity of at least about one liter, and the collection tube can have a capacity of at least about 50 ml.
- the opening between the darkened chamber and the transparent collection tube can be, for example, in the range of about 19 mm to 22 mm across.
- the transparent collection tube can have an inner diameter, with at least a portion of which being about 20 mm to 26 mm.
- the length of the transparent collection tube can be at least about 110 mm.
- the ratio of the length of dark region (e.g., darkened chamber) to collection tube length can be about 1-3 to 1.
- a method for separating plankton comprising acclimating a plankton sample comprising zooplankton and phytoplankton in a darkened chamber for a sufficient amount of time to facilitate a response to a change in light intensity; introducing light at a sufficient level to initiate phototactic movement to a collection tube filled with a fluid (e.g., water, for example, filtered water, such as in situ filtered water), wherein the zooplankton is separated from the phytoplankton; collecting a zooplankton sample from the device; and collecting a phytoplankton sample from the device, wherein the plankton is separated to zooplankton and phytoplankton.
- the plankton sample can be a concentrated sample. The concentrated sample can be diluted.
- a method for separating plankton comprising acclimating a plankton sample comprising zooplankton and phytoplankton in a darkened chamber for a sufficient amount of time to facilitate a response to a change in light intensity; introducing light at a sufficient level to initiate positive phototactic movement of the zooplankton to a fluid-filled collection tube, said tube being of sufficient length to reinforce negative contrast orientation, wherein zooplankton is separated from phytoplankton, collecting a zooplankton sample from the collection tube; and collecting a phytoplankton sample from the collection tube, wherein the plankton is separated to zooplankton and phytoplankton.
- the method further includes analyzing (e.g., studying) the sample.
- analysis can comprise, e.g., identification, enumeration, and/or quantification of biomass, quantification of pigment fluorescence, etc.
- the invention relates to a method for separating plankton, comprising placing a plankton sample comprising zooplankton and phytoplankton in a darkened chamber; acclimating the plankton for a sufficient amount of time to facilitate a response by the zooplankton to a change in light intensity; and introducing ambient light to the chamber to initiate phototactic movement of the zooplankton to a collection tube filled with water, the phototactic movement into the collection tube separating the zooplankton from the phytoplankton.
- the collection tube is of sufficient length to reinforce contrast orientation.
- collection tube is transparent.
- the collection tube is located below the darkened chamber at a 90° angle relative to a horizontal base of the darkened chamber. In some embodiments, the collection tube has a length sufficient to ensure that an angle of 48° to normal can be achieved by the zooplankton. In some embodiments, the plankton is acclimated for 20 minutes or less.
- the invention relates to a plankton separation method comprising introducing a plankton sample comprising zooplankton and phytoplankton to a darkened chamber of the devices described herein, acclimating the sample for a sufficient amount of time to facilitate a response to a sudden change in light intensity; introducing highly directional ambient light at a sufficient level to initiate phototactic movement to a collection tube filled with water, said tube of sufficient length to reinforce negative contrast orientation, wherein the zooplankton is separated from the phytoplankton, collecting zooplankton from the collection tube; and collecting phytoplankton from the collection tube, wherein the plankton is separated to zooplankton and phytoplankton samples.
- the invention relates to a plankton separating device comprising a darkened chamber having a port, wherein the port has a closure; and a collection tube attached to the port of the chamber for allowing highly directional ambient light, wherein the collection tube is of sufficient length to reinforce migration of the zooplankton, thereby separating plankton into its component parts, wherein the closure is configured to be changed from a closed state to an open state with the collection tube attached to the port.
- the closure is a stopper or valve.
- the chamber is configured to be positioned above the collection tube during operation, the chamber having an outer perimeter surrounding a central axis, the collection tube being elongated and extending from the darkened chamber along the central axis, starting beyond a point that makes about a 48° angle to the central axis while extending to the nearest location of maximum outer perimeter dimension of the darkened chamber.
- the outer perimeter of the darkened chamber and the side walls of the collection tube are generally round.
- the collection cartridge (tube) is of sufficient length to reinforce contrast orientation.
- collection tube is transparent.
- the collection tube is located below the darkened chamber at a 90° angle relative to a horizontal base of the darkened chamber.
- the collection tube has a length sufficient to ensure that an angle of 48° to normal can be achieved by the zooplankton.
- the collection tube is of a sufficient length to reinforce migration.
- the collection tube has one of tapered or straight side walls.
- the collection tube extends away from the darkened chamber beyond a point that makes about a 20° ⁇ 2° angle to the central axis while extending to the nearest location of maximum outer perimeter dimension of the darkened chamber. In some embodiments, at least about 40% of length of the collection tube extends beyond said point that makes said about a 20° angle.
- the darkened chamber and the collection tube have outer diameters with a darkened chamber ODb to transparent collection tube ODt ratio of about 3-3.5 to 1, the transparent collection tube having a length with a transparent collection tube length to ODt ratio of about 3.9-5.2 to 1, thereby providing a contrast shadow relative to the transparent collection tube simulating a predator to plankton, and sufficient length in the transparent collection tube for plankton to migrate from and move away from the darkened chamber to minimize plankton collected in the transparent collection tube from migrating back into the darkened chamber.
- the darkened chamber has a capacity of at least about one liter
- the collection tube has a capacity of at least about 50 ml.
- the opening between the darkened chamber and the collection tube is in the range of about 19 to about 22 mm across.
- the collection tube has an inner diameter, at least a portion of which being about 20 mm to about 26 mm.
- the length of the collection tube is at least about 110 mm.
- a plankton separation method comprising acclimation of a plankton sample comprising zooplankton and phytoplankton in a darkened chamber of the device for a sufficient amount of time to facilitate a response to a change (e.g., a sudden change) in light intensity; introducing highly directional ambient light for phototactic movement of zooplankton from the darkened chamber to a fluid-filled collection tube of sufficient length to reinforce negative contrast orientation; collecting zooplankton from the collection tube; and collecting phytoplankton from the collection tube, wherein the plankton is separated to zooplankton and phytoplankton.
- a change e.g., a sudden change
- kits are described.
- a kit comprising a plankton separation device of the invention and instructions for using the device is described.
- the kit can comprise a darkened chamber and a collection tube.
- the kit further comprises filtered water.
- Educational materials can be included in with kits.
- Educational materials can include, but are not limited to, any materials which serve to impart knowledge, information, or skills, including, but not limited to, instructions for how to use the device; information regarding how to analyze the samples; information regarding water quality, water studies, and/or plankton; and suggestions for age and/or ability appropriate activities and lab exercises, including for those in age group K-12.
- the invention encompasses methods of measurement and assays of plankton and plankton related materials using the methods and devices described herein.
- the measurement is a measurement of planktonic biomass.
- FIGS. 1A-1C show an embodiment of the separation device, having a darkened chamber ( 10 - 1 ; amber bottle), closure for temporary physical separation ( 20 - 1 , stopper), collection tube ( 30 - 1 ; tube with tapered end) and optional external support ( 40 - 1 ; sling support).
- FIGS. 1D-1F show other embodiments of the device, with external support of rings, a table support, and a c-clamp system.
- FIGS. 1G-1I shows further embodiments of the separation device.
- FIG. 1J is a front view of the embodiment of FIG. 1A with annotations.
- FIG. 1K is a front view of the embodiment of FIG. 1D with annotations.
- FIG. 1L is a front view of a ball valve connected to a filter cone and cartridge.
- FIG. 1M is a side view of an embodiment of a separation device in the present invention including a securement arrangement.
- FIG. 1N is a side view showing another configuration of the securement arrangement of FIG. 1M .
- FIG. 3A and FIG. 3B are plots showing mean separation efficiencies for macrozooplankton and microzooplankton in Lake Cochichewick (A) and Willand Pond (B) on Sep. 4 and Sep. 5, 2013, respectively.
- FIG. 5A and FIG. 5B are plots showing calibration curves for macrozooplankton (solid line) and cyanobacteria (dashed line) for Lake Cochichewick (A) and Willand Pond (B) compared with data from Oct. 10 and Oct. 16, 2013, respectively.
- FIGS. 7A and 7B are graphs showing separation efficiency curves for macrozooplankton biomass versus microcystis equivalents and chlorophyll in Lake Cochichewick on Sep. 4, 2013 and Oct. 10, 2013.
- FIGS. 7C and 7D are graphs showing separation efficiency curves for macrozooplankton biomass versus microcystis equivalents and chlorophyll in Willand Pond Sep. 5, 2013 and Oct. 16, 2013.
- FIGS. 8A and 8B are graphs showing separation efficiency curves for macrozooplankton biomass versus microcystis equivalents and chlorophyll in Lake Cochichewick Sep. 4, 2013, Oct. 10, 2013, and Oct. 29, 2014.
- FIGS. 8C and 8D are graphs showing separation efficiency curves for macrozooplankton biomass versus microcystis equivalents and chlorophyll in Willand Pond Sep. 5, 2013, Oct. 16, 2013 and Sep. 6, 2014.
- FIG. 9 is a graph depicting effect of minimum adapter diameter on separation efficiency. Macrozooplankton in Lake Cochichewick 29 Oct. 2014 with standard errors for each shown. Ambient (t-3.54, df-4, p-0.024), Artificial (t-4.90, df-4, p-0.008).
- FIG. 10 are graphs showing separation efficiencies for individual zooplankters from Lake Cochichewick on Oct. 29, 2014 and Willand Pond on Sep. 6, 2014.
- FIG. 11 is a table of separation efficiencies for zooplankton biomass as observed in Lake Cochichewick 2013-2014.
- FIG. 12 is a table of separation efficiencies for zooplankton biomass as observed in Willand Pond 2013-2014.
- Described herein are methods and devices for limnological studies using plankton separation, for analysis, bioaccumulation selectivity and evaluation of biological community associations. It was found that the methods and devices of the invention allow the researcher to rapidly collect samples for improved routine surveillance programs and ecological risk assessments in situ.
- planktonic populations in the aquatic ecosystems is dynamic and constantly changing in species composition and biomass distribution. Changes in species composition and biomass distribution may affect separation efficiency.
- Plankton particularly phytoplankton
- Plankton have long been used as an indicator of water quality. Because of their short life spans, plankton responds quickly to environmental changes. Some species are very sensitive to organic and/or chemical wastes. Some species have also been associated with noxious blooms causing toxic conditions apart from taste and odor problems. The presence of toxins and potential for bioaccumulation threaten fresh water ecosystems, humans and animals.
- the physical and chemical characteristics of water affect the abundance, species composition, stability and productivity of indigenous populations of aquatic organisms.
- the biological methods used for analyzing (e.g., assessing) water quality include, but are not limited to, collection, counting and identification of aquatic organisms; biomass measurements; measurements of metabolic activity rates; toxicity tests; potential for bioaccumulation of pollutants; and processing and interpretation of biological data.
- the work involving plankton analysis aids in the explanation of the cause of color and turbidity and the presence of objectionable odor, tastes and visible particles in waters; the interpretation of chemical analyse; and the identification of the nature, extent and biological effects of pollution. It also provides data on the status of an aquatic system on a regular basis.
- the process of plankton separation provides a sample of adequate size and improved quality for postanalytical techniques that include, but are not limited to, assays such as enzyme-linked immunosorbent assay (ELISA), inhibition assays and radioassays.
- assays such as enzyme-linked immunosorbent assay (ELISA),
- routine surveillance programs can be improved with the use of the cost-effective methods and devices described herein to determine the relative contribution of the cyanobacteria to the phytoplankton assemblage.
- the toxigenicity of the cyanobacterial community can be assessed with a rapid, cost effective method to obtain samples that yield precise measures of phytoplankton biomass and weight specific toxicity. This information can be used to determine trends in the ecological integrity of the aquatic systems and support the decision making process regarding use attainment.
- Phototactic behavior is a stimulus response that requires a velocity (kinesis) and a direction (orientation). To take advantage of this naturally occurring phenomenon, the researcher must establish a set of necessary conditions before the phenomenon occurs (Nagel 1974).
- a hierarchy of response (Loose 1993) to stimulus would include the relative change in light intensity (Ringelberg 1964) which would exceed the rheobase (Ringelberg, 1964, Daan and Ringelberg, 1969) necessary to initiate a swimming response.
- a positive phototactic response could be anticipated as a result of exposure to a narrow stimulus beam (Forward 1988) (highly directional light) with an angular light distribution that approximates 0° (Schallek 1942).
- Body axis orientation would result from dorsal beam contrast (45° or less) (Ringelberg 1964) (Ringelberg, Flik and Buis 1975) that would control the direction of movement in the vertical plane.
- the orientation of the device serves to reinforce body axis orientation as a flight response from predators.
- the swimming velocity would have to be sufficient to migrate the distance in the time allowed. Any barriers such as spatial requirements, temperature, pressure, angular light distribution, and other environmental conditions would have to be overcome.
- the necessary conditions for the phenomenon to occur were met with each researcher modifying the conditions somewhat (spatial requirements, light source, time, distance and temperature). For example, previous researchers provided illumination, followed by waiting 2 hours, five (5) minutes, 15 minutes and twenty (20) minutes before collecting their respective zooplankton samples. In addition, various volumes were collected. These methods resulted in reduced separation efficiency.
- the methods and devices of the invention allow for the qualitative and quantitative analysis of plankton. Such studies can monitor the impact of environmental changes on ecological integrity.
- the methodology and devices simplify and reduce costs associated with monitoring programs while improving the accuracy of the data collected.
- the device and methods described herein utilize phototactic behavior and contrast orientation for maximal in situ separation of phytoplankton and zooplankton. Further, gathering quantitative data on separation efficiencies, the development of conditions necessary for a desired result based on research objectives can be achieved.
- plankton refers to a diverse group of organisms that live in fresh or salt water. Plankton is usually free floating, suspended in water, nonmotile or insufficiently motile to overcome transport by water currents. Plankton includes phytoplankton and zooplankton.
- phytoplankton generally live near the water surface where there is sufficient light to support photosynthesis.
- phytoplankton include, for example, algae, diatoms, cyanobacteria, dinoflagellates and coccolithophores.
- Phytoplankton can be, for example, unicellular, colonial or filamentous, and is autotrophic (primarily photosynthetic) and can be eaten by zooplankton and other organisms occurring in the same environment.
- Cyanobacteria is photosynthetic bacteria found in freshwater and marine environments, including lakes, streams, ponds, the ocean and other surface waters. Cyanobacteria can include planktonic cells or phototrophic biofilms. It can reproduce exponentially to form extensive and highly visible blooms. This blooming cyanobacteria can produce cyanotoxins in such concentrations that they poison and even kill animals and humans. Cyanotoxins can also accumulate in other animals such as fish and shellfish, and cause poisonings such as shellfish poisoning. Among cyanotoxins are some of the most powerful natural poisons known, including poisons which can cause death by respiratory failure. The toxins include neurotoxins, cytotoxins, hepatotoxins, and endotoxins.
- Zooplankton include, for example, microscopic protozoans, rotifers, cladocerans and copepods and other aquatic organisms.
- the species assemblage of zooplankton also may be useful in assessing water quality.
- Zooplankton can be further separated into size classes, such as macrozooplankton and microzooplankton.
- Macrozooplankton include, but are not limited to, microcrustaceans larger than 63 ums (microns), including but not limited to Cladocerans: Bosmina spp., Chydorineae spp., Ceriodaphnia spp., Daphnia spp., Diaphanosoma spp.; and Copepods: Calanoids-female, Calanoids-male ( Diaptomus spp.), Microcyclops spp., Mesocyclops spp., and all stages of copepodites.
- microcrustaceans larger than 63 ums microns
- Cladocerans Bosmina spp., Chydorineae spp., Ceriodaphnia spp., Daphnia spp., Diaphanosoma spp.
- Copepods Calanoids-female, Calanoids-male ( Diaptomus s
- Microzooplankton include, but are not limited to, microcrustacean nauplii and rotifers larger than 20 um, such as 20-63 microns, including, but not limited to: Keratella spp., Kellicottia spp., Trichocera spp., Asplancha spp., and Ascomorpha spp.
- phototaxis refers to locomotory movement that occurs when a whole organism moves responds to a relative change in light intensity. This can be advantageous for phototrophic organisms as they can orient themselves most efficiently to receive light for photosynthesis. Phototaxis is positive if the movement is in the direction of increasing light intensity and negative if the direction is opposite.
- the variables that initiate phototactic behavior and maximize migration in the present disclosure include but are not limited to, the relative change in light intensity (e.g., without the use of an artificial light source or filter(s)).
- contrast orientation refers to locomotory movements that occur when a whole organism responds to a spatial change in light intensity. This is advantageous to phototactic organisms as they can orient themselves most efficiently to respond to light/dark boundaries that may indicate the presence or absence of predators. Contrast orientation can be positive or negative.
- the plankton is acclimated in the chamber.
- Acclimation for a “sufficient amount of time” means a sufficient amount of time to facilitate a response by the plankton to a change in light intensity, for example, between about 20 and about 45 minutes. In one embodiment, the time is about 20 minutes or less, e.g., about 20 minutes.
- plankton separation times can be based on a number of factors, including, for example, the potential for reverse migration by the zooplankton (for example, about 0-60 minutes, e.g., 1 hr.) and phytoplankton contamination of the zooplankton portion as a result of gravity.
- the desirable phytoplankton “contamination” level typically does not exceed 5%.
- sampling refers to collecting a sample, e.g., a water sample, comprising plankton for monitoring.
- migration potential is the distance traveled by an organism in a desired timeframe.
- plankton net refers to a type of field equipment used to trap plankton. It typically has a polyethylene filter of a defined mesh size and a graduated measuring jar attached to the other end. A handle or ring can hold the net. The mesh size of the net determines the size range of the plankton trapped. For example, a mesh of 50 ums can be used for collecting samples.
- the chamber ( 10 - 1 ) can be of a dark color (e.g., black, amber) and constructed of a durable material, in some embodiments with a conical shape and smooth walled.
- the chamber is constructed so that light is prevented from entering the chamber during the separation phase.
- the chamber can have at least one port ( 12 ) with a closure for temporary separation ( 20 ) (e.g., stopper with plastic rod ( 20 - 1 ), valve, ball valve ( 20 - 2 ) screw cap, or other mechanism to stop fluid communication as needed).
- the chamber has one or more additional sample port(s) ( 14 ) for introduction of the water and/or sample.
- the sample port is located at the top of the chamber and can be of a sufficient size for introduction of sample.
- the sample port (opening) includes a closure ( 16 ), for example a cap ( 16 - 1 ).
- the port ( 14 ) can act as a sample port if there is only one port.
- the port can have openings to the interior of the chamber that further have a closure.
- the internal chamber is darkened and a temporary physical separation (e.g., a closure) between the chamber and a collection tube ( 30 ) is removed.
- the collection tube is of a sufficient size and material to facilitate migration of the zooplankton.
- the collection tube is attached to the chamber ( 10 - 1 ) via a port ( 12 ) and is transparent or translucent or can become transparent for allowing a sufficient amount of highly directional ambient light to enter and facilitate collection of zooplankton.
- the collection tube is conical in shape to facilitate the collection of zooplankton.
- the length of the collection tube can be selected so that the zooplankton can migrate past a 48° angle to the normal within the tube.
- the collection tube optionally includes a valve ( 32 ) e.g., a ratchet valve ( 32 - 1 ), or clamp to permit or stop flow of the zooplankton.
- the collection tube can be a tapered tube.
- the tube has a screw cap on one end and blunt end with cap on the other. The collection tube is of sufficient length for migration and separation of the components of the plankton.
- the separation chamber includes an external support to the device ( 40 ) for example, a bridle/sling ( 40 - 1 ) assembly and/or external rings, for positioning the chamber for use with a table stand ( 40 - 2 ) or a clamping device ( 40 - 3 ).
- an external support to the device ( 40 ) for example, a bridle/sling ( 40 - 1 ) assembly and/or external rings, for positioning the chamber for use with a table stand ( 40 - 2 ) or a clamping device ( 40 - 3 ).
- the darkened container or chamber ( 10 - 1 ) of separating device 6 for containing a sample 11 of water and plankton for separation can be a generally cylindrical bottle with a circular or round outer perimeter or side wall, and have a height H with a generally constant outer diameter OD b that concentrically surrounds a longitudinal central axis X.
- the collection chamber, region, container or tube ( 30 - 1 ) for containing filtered water 13 into which desired plankton 15 can be collected, can be connected to and sealed to the darkened chamber ( 10 - 1 ) at a central outlet, opening or port ( 12 ).
- the collection tube ( 30 - 1 ) can extend in a straight manner from the darkened chamber ( 10 - 1 ) along or aligned with the longitudinal central axis X.
- the collection tube ( 30 - 1 ) is typically transparent and typically operates with existing ambient light, and can have a tapered shape or side walls, being widest at port ( 12 ) and narrowest at ratchet clamp or valve ( 32 - 1 ).
- the device comprises a single port.
- the separating device 6 can be configured to be used in operation with the darkened chamber ( 10 - 1 ) being positioned above the transparent collection tube ( 30 - 1 ), for example with the longitudinal central axis X being vertical or near vertical.
- This can allow plankton such as phototactic zooplankton that are attracted to light, such as ambient light on, within or illuminating the transparent collection tube ( 30 - 1 ), to move or swim vertically downwardly from darkened chamber ( 10 - 1 ) with gravity into the transparent collection tube ( 30 - 1 ). Higher percentages of such plankton tend to swim vertically downwardly with gravity to light, in comparison to swimming to light horizontally or laterally, or vertically upwardly against gravity.
- the transparent collection tube ( 30 - 1 ) vertically below the darkened chamber ( 10 - 1 ) can maximize desired plankton migration toward light to obtain maximum or high separation efficiencies.
- the port ( 12 ) between the darkened chamber ( 10 - 1 ) and the transparent collection tube ( 30 - 1 ) can have a small opening in comparison to the outer perimeter diameter OD b (about 1 ⁇ 3 in size), which produces a narrow defined circular beam or spot of light with high contrast from the transparent collection tube ( 30 - 1 ) vertically upwardly from below along longitudinal axis X into darkened chamber ( 10 - 1 ), which draws phototactic plankton 15 downwardly vertically into the transparent collection tube ( 30 - 1 ).
- the 48° to normal cone angle is the angle A which is measured 48° relative to the longitudinal central axis X and a line extending from a point 38 along longitudinal axis X that intersects or passes through a horizontal or lateral base line 42 at the widest or maximum perimeter or diameter side wall dimension location of darkened chamber ( 10 - 1 ) that is closest to the transparent collection tube ( 30 - 1 ).
- the longitudinal axis X is normal to lateral line 42 .
- a shadow of an object such as darkened chamber ( 10 - 1 ) above plankton 15 (such as zooplankton that have migrated into transparent collection tube ( 30 - 1 )), at a cone angle of 48° or less, can form a concentric contrast shadow relative to the plankton 15 within the interior of the transparent collection tube ( 30 - 1 ).
- That contrast shadow can simulate a predator to the plankton 15 , which tends to cause the plankton 15 to swim downwardly within the transparent collection tube ( 30 - 1 ) away from the darkened chamber ( 10 - 1 ) to maintain separation of the plankton in separating device 6 .
- angle A is larger than 48°, the shadow of the darkened chamber ( 10 - 1 ) typically does not provide enough contrast between light and dark to the plankton 15 to simulate a predator, and some of the plankton 15 within the transparent collection tube ( 30 - 1 ) tends to migrate back into the darkened chamber ( 10 - 1 ). As can be seen in FIG.
- the 48° angle A is located within the darkened chamber ( 10 - 1 ), and the cone angle B measured relative to longitudinal axis X and a line extending from a point 44 along longitudinal axis X, at the transition between the darkened chamber ( 10 - 1 ) and the transparent collection tube ( 30 - 1 ), to the outer perimeter of darkened chamber ( 10 - 1 ) on base line 42 , is less than 48°.
- Angle B is the angle that plankton 15 can migrate past and view the concentric contrast shadow of the darkened chamber ( 10 - 1 ).
- This angle B is less than 48°, such as 41° in some embodiments, and forms a concentric angle and contrast shadow simulating a predator in all directions when the darkened chamber ( 10 - 1 ) and the transparent collection tube ( 30 - 1 ) are both round, that drives the plankton within the transparent collection tube ( 30 - 1 ) downwardly away from the darkened chamber ( 10 - 1 ).
- the transparent collection tube ( 30 - 1 ) is sufficiently long enough to allow the plankton 15 to swim far enough downwardly away from the darkened chamber ( 10 - 1 ) with gravity to not migrate upwardly back into the darkened chamber ( 10 - 1 ) against gravity.
- the darkened chamber ( 10 - 1 ) can be a light impermeable plastic, glass or metal bottle for holding a sample 11 of about 1 liter
- the transparent collection tube ( 30 - 1 ) can be a clear or transparent tapered elongate plastic or glass tube for holding or containing about 50 ml of filtered water 13 and collected plankton 15
- the darkened chamber ( 10 - 1 ) can have a height H of about 166 mm (6.5 in) with a maximum outer perimeter diameter OD b portion of about 94 mm (3.7 in) that is constant until reaching the top of the darkened chamber ( 10 - 1 ).
- the darkened chamber ( 10 - 1 ) can narrow down from the outer perimeter diameter OD b of 94 mm at line 42 to about 30 mm (1.2 in) at port ( 12 ) over a distance Y that can be about 50 mm (2 in).
- the transparent collection tube ( 30 - 1 ) can have a length L of about 150 mm (5.9 in) between port ( 12 ) and ratchet valve ( 32 - 1 ).
- the transparent collection tube ( 30 - 1 ) can be round and have a maximum outer diameter OD t at port ( 12 ) of about 29.5 mm (1.2 in) with a corresponding inner diameter 1D t of about 21.5 mm (0.85 in).
- the opening into the transparent collection tube ( 30 - 1 ) from darkened chamber ( 10 - 1 ) can be about 21 mm ⁇ 2 mm (0.83 in ⁇ 0.08 in). It has been found that smaller openings into the transparent collection tube ( 30 - 1 ), such as 13 mm, hinder the migration of phototactic plankton and result in lower separation efficiencies.
- the outer diameter can taper to about 10 mm (0.4 in) with a corresponding inner diameter of about 7 mm (0.3 in).
- Port ( 14 ) at the top of darkened chamber ( 10 - 1 ) can have a diameter of about 69 mm (2.7 in).
- Angle B can be about 41° ⁇ 2°.
- the transparent collection tube ( 30 - 1 ) can form a narrow circular or round tapering column of water exposed to ambient light, extending downwardly concentrically from darkened chamber ( 10 - 1 ), starting with about 1 ⁇ 3 the diameter of the darkened chamber ( 10 - 1 ).
- a cone angle C of about 20° ⁇ 2°, such as 19°, can extend relative to the longitudinal axis X and a line extending from point 40 along longitudinal axis X within transparent collection tube ( 30 - 1 ) to the maximum outer perimeter diameter OD b at base line 42 .
- About 40% of the length of transparent collection tube ( 30 - 1 ) can extend downwardly below the 19° angle C. This provides enough downwardly vertical space within transparent collection tube ( 30 - 1 ) where collected plankton 15 can swim downwardly far enough away from darkened chamber ( 10 - 1 ) in response to the simulated predatory contrast shadow produced, where the plankton will not migrate back into the darkened chamber ( 10 - 1 ).
- the darkened chamber outer diameter OD b and the transparent collection tube outer diameter OD t can have an OD b to OD t ratio of about 3-3.3 to 1, such as about 3.2 to 1, and there can also be an OD b to transparent collection tube inner diameter ID t ratio, OD b to 1D t ratio of about 4.2-4.6 to 1, such as about 4.4 to 1.
- the transparent collection tube ( 30 - 1 ) can have a length L to outer diameter OD t ratio of about 5-5.2 to 1, such as 5.1 to 1, and a L to 1D t ratio of about 6.8-7.2 to 1, such as about 6.9 to 1.
- the ratio of the dark region length of darkened chamber ( 10 - 1 ) to transparent collection tube length L can be about 1.2-1.6 to 1 such as about 1.4 to 1. Such configurations, dimensions and ratios can maximize separation efficiencies of plankton separation, by using plankton's migration responses to light and predators.
- the darkened chamber ( 10 - 1 ) of separating device 8 can be similar to that in separating device 6 , and can have similar construction, shape and dimensions as previously discussed. Separating device 8 can differ in that instead of having a closure stopper ( 20 - 1 ) for initially separating the sample 11 within the darkened chamber ( 10 - 1 ) from the transparent collection tube ( 30 - 1 ), a valve ( 20 - 2 ) such as a ball valve, can be mounted or connected to port ( 12 ) of the darkened chamber ( 10 - 1 ), and a transparent collection chamber, region, container or tube ( 30 - 2 ) for typically operating in ambient light, can be connected to the bottom or lower end or outlet of valve ( 20 - 2 ).
- a closure stopper ( 20 - 1 ) for initially separating the sample 11 within the darkened chamber ( 10 - 1 ) from the transparent collection tube ( 30 - 1 )
- a valve ( 20 - 2 ) such as a ball valve, can be mounted or connected to port ( 12
- the location of base line 42 and the 48° cone angle A relative to darkened chamber ( 10 - 1 ) are similar to that in separating device 6 .
- the valve ( 20 - 2 ) which can be dark or light impermeable, forms a longer darkened region relative to base line 42 along longitudinal axis X, before reaching transparent collection tube ( 30 - 2 ), that can have a distance Z of about 135 mm (5.3 in).
- the valve ( 20 - 2 ) can have an opening therethrough with an inner diameter of about 20 mm (0.78 in) ⁇ 2 mm (0.08 in).
- the valve ( 20 - 2 ) connected to the darkened chamber ( 10 - 1 ) can form a narrow circular dark column extending concentrically downward from darkened chamber ( 10 - 1 ) before reaching transparent collection tube ( 30 - 2 ), that can be about 121 mm (4.8 in) long.
- the transparent collection tube ( 30 - 2 ) can extend in a straight manner from valve ( 20 - 2 ) along longitudinal axis X, a length of about 111 mm (4.4 in), and can be round or cylindrical with a side wall having a constant outer diameter OD t of about 28 mm (1.1 in) and an inner diameter 1D t of about 25 mm (0.98 in).
- the collection tube ( 30 - 2 ) can form narrow circular, round or cylindrical column of water 13 exposed to ambient light, extending downwardly concentrically from darkened chamber ( 10 - 1 ) and valve ( 20 - 2 ), having about 1 ⁇ 3 the diameter of darkened chamber ( 10 - 1 ).
- the transparent collection tube ( 30 - 2 ) can be used for containing about 50 ml of filtered water 13 and collected plankton 15 .
- the use of the ball valve ( 20 - 2 ) instead of closure stopper ( 20 - 1 ) can provide separating device 8 with more consistent separation results than with separating device 6 .
- the ball valve ( 20 - 2 ) can open the path or port ( 12 ) between the darkened chamber ( 10 - 1 ) and the transparent collection tube ( 30 - 2 ) in a repetitive smooth consistent manner, with a twist of a knob.
- closure stopper ( 20 - 1 ) in separating device 6 a stopper is pushed into or pulled from port ( 12 ) by a stick or rod.
- Cone angle B is measured relative to longitudinal axis X and a line extending from a point 40 along longitudinal axis X at the transition between the darkened valve ( 20 - 2 ) and the transparent collection tube ( 30 - 2 ), that intersects the outer diameter OD b at base line 42 , and is less than 48°.
- angle B can be about 20° ⁇ 2°, such as 19° and can form a concentric contrast shadow of the darkened chamber ( 10 - 1 ) relative to the plankton 15 within the interior of the transparent collection tube ( 30 - 2 ) that effectively simulates a predator to the plankton 15 .
- plankton 15 can swim downwardly with gravity within transparent collection tube ( 30 - 2 ) away from the darkened chamber ( 10 - 1 ) to maintain separation of desired plankton.
- a 19° angle B is less than half that of 48°, the 19° angle is very effective to prevent plankton 15 within transparent collection tube ( 30 - 1 ) from migrating back into darkened chamber ( 10 - 1 ) against gravity, and the full length L of transparent collection tube ( 30 - 2 ) extends below point 40 of the 19° angle B to allow plenty of room for the plankton 15 to migrate downwardly away from darkened chamber ( 10 - 1 ) and valve ( 20 - 2 ) with gravity.
- the darkened chamber outer diameter OD b and the transparent collection tube outer diameter OD t can have an OD b to OD t ratio of about 3.3-3.5 to 1, such as 3.4 to 1, and there can also be an OD b to transparent collection tube inner diameter ID t ratio, OD b to ID t ratio of about 3.5-4 to 1, such as 3.8 to 1.
- the transparent collection tube ( 30 - 2 ) can have a length L to outer diameter OD t ratio of about 3.9-4.2 to 1, such as 4 to 1, and a L to 1D t ratio of about 4.2 to 4.6 to 1, such as 4.4 to 1.
- the ratio of the dark region length consisting of darkened chamber ( 10 - 1 ) and valve ( 20 - 2 ) to transparent collection tube length L can be about 2.5-2.9 to 1, such as 2.7 to 1. About 40% of the darkened region can be a narrow or circular column extending through valve ( 20 - 2 ). These configurations, dimensions and ratios can also maximize separation efficiencies of plankton separation, and also uses plankton's migration responses to light and predators. Although separating devices 6 and 8 typically make use of ambient light entering transparent collection tubes ( 30 - 1 ) and ( 30 - 2 ). If desired, a reflector or a light source 46 can be used and positioned below or to the side of the devices 6 and 8 for directing light 46 a upwardly into collection tubes ( 30 - 1 ) and ( 30 - 2 ).
- the separation devices 6 and 8 are able to obtain higher separation efficiencies of plankton than prior devices.
- the stopper ( 20 - 1 ) or valve ( 20 - 2 ) can keep the sample 11 to be separated, both physically and phototactically isolated within the darkened chamber ( 10 - 1 ) from the transparent collection tubes ( 30 - 1 ) and ( 30 - 2 ), until opened.
- the vertical orientation of the darkened chamber ( 10 - 1 ) being above the transparent collection tubes ( 30 - 1 ) and ( 30 - 2 ) with a circular beam or spot of light being directed vertically upward through a relatively small port ( 12 ) in the darkened chamber ( 10 - 1 ) provides defined light to dark contrast that promotes initial migration of phototactic plankton 15 downwardly toward the light while assisted by and in the direction of gravity.
- the opening between the darkened chamber ( 10 - 1 ) and the transparent collection tube is sized small enough to provide an attractive defined high contrast beam of light, while large enough not to impede plankton migration.
- the transparent collection tubes extend straight down from the darkened chamber ( 10 - 1 ) so that migrating plankton 15 can swim past a 48° angle or less to the longitudinal axis X as described above, such as beyond a 41° point or a 19° or 20° point, within the transparent collection tube.
- the plankton 15 view the concentric contrast shadow of the darkened chamber ( 10 - 1 ) as a predator and tend to move downwardly with gravity, and not migrate back into the darkened chamber ( 10 - 1 ) against gravity.
- the transparent collection tube can have a length that is long enough for the plankton 15 to swim far enough downwardly away from the darkened chamber ( 10 - 1 ) and not to migrate back in.
- the transparent collection tube can extend at least about 40% of the length L of the transparent collection tube beyond the point that makes about a 20° ⁇ 2° angle to the longitudinal axis X as previously described.
- the whole length L of transparent collection tube ( 30 - 2 ) extends beyond the point of the 19° or 20° angle.
- valve ( 20 - 2 ) can be connected to a phytoplankton cartridge and filter cones for processing, as desired.
- separating device 8 can be mounted by a mounting device bracket or arrangement 48 , for example, to a surface or rail, such as on a boat or canoe for use or testing on the water.
- the mounting device 48 can have a C-clamp 26 for securement to the desired surface or rail 24 .
- a bracket body 28 can have a portion 28 a secured to or around a vertical member of the C-clamp 26 , and a portion 28 b for rotatably or pivotably mounting a pivot rod 34 therein about a vertical axis X 1 .
- the separating device 8 can have two spaced securement bands 22 around the darkened chamber ( 10 - 1 ) with securement fixtures 22 a that secure the separating device 8 to the pivot rod 34 .
- the pivot rod 34 can have stop members 36 .
- the pivot rod 34 can allow the separating device 8 to be pivotably adjusted about axis X 1 .
- the separating device 8 can be positioned to extend above C-clamp 26 as shown in FIG. 1M , or below as seen in FIG. 1N .
- the devices, methods and kits can be used together or separately to obtain of well-separated samples of phytoplankton and/or zooplankton.
- One of skill in the art will recognize that modifications and adjustments to the device, kits and methods are encompassed by the scope of the invention described herein.
- Lake Cochichewick in North Andover, Mass. (August-October 2013) and Willand Pond in Dover, N.H. (September-October, 2013).
- Lake Cochichewick is classified as a mesotrophic system and Willand Pond is classified as an oligotrophic system.
- Filtered lake water was prepared by filtering 1 liter of whole lake water through a 50 um mesh ring net and placing it in a 1 liter beaker. Prior to use in the separation device, filtered lake water samples were analyzed following quantification.
- Step 1 A separation device was suspended using a sling apparatus.
- the collection tube was closed off using the ratchet clamp, and filled with filtered lake water.
- the collection tube was then physically separated from the chamber with the use of a black rubber stopper attached to a plastic rod.
- the plankton sample was then poured into the chamber.
- time series or calibration series were conducted, as many separation devices as needed were prepared in this manner concurrently. For example, when a time series for 0, 10, 20 and 30 minutes was conducted, four (4) separation devices were prepared. The rubber stopper was removed, the lid placed on top of the chamber and the timer set for the desired time interval.
- Step 2 At the desired time interval, the desired volume of sample was released from the collection tube by opening the ratchet clamp, dispensing the sample into an appropriate container, and then closing the ratchet clamp. This sample was marked as the “Z” (zooplankton) portion. The remainder of the sample was released from the collection tube by opening the ratchet clamp and dispensing the sample into a 1 L. carboy. This sample was marked as the “P” (phytoplankton) portion.
- Step 3 Phycocyanin (PC) and Chlorophyll (a) (Chla) for the “Z” portion and “P” portion were quantified in vivo, using intact cells without filtration or extraction, using a two-channel hand held AquaFluor fluorometer (Turner Designs, Sunnyvale, Calif.). Using a disposable pipette, 5 mls of each “Z” portion and each “P” portion was placed into a Turner Design methacrylate cuvette. Large specimens of zooplankton were removed from the cuvette using a small tipped disposable pipette prior to analysis. The filled cuvette was placed in the fluorometer and, using channel A, the relative fluorescence units for PC were recorded.
- PC Phycocyanin
- a Chlorophyll
- Step 4 The “Z” portion was preserved using 5% formalin/sucrose. See Haney, J. F. & D. J. Hall, 1973, “Sugar coated Daphnia : A preservation technique for Cladocera,” Limnol. Oceanogr. 16: 970-977.
- the “P” portion was filtered through a 50 um mesh ring net, backwashed and brought to an appropriate volume using filtered lake water, and preserved using 5% formalin/sucrose.
- Step 5 Zooplankton in each “Z” and “P” sample were identified, enumerated and measured. A minimum of 200 individuals were counted in a known subsample volume. The body length (and width as needed) of the first 20 individuals encountered for each genus and/or species was measured. If needed, the count data of the “P” portion was adjusted (Adj. P) to reflect the proportions of sample removed above to quantify phycocyanin and Chlorophyll (a). The count data for the “Z” and “P” portion were adjusted to reflect total sample volume. Dry weight estimates for Daphnia spp. Diaphanosoma spp., Copepods and Bosmina spp. were calculated according to Bottrell, H.
- the proportionate values were arcsine transformed (Zar, Jerrold H., Biostatistical Analysis , Prentice-Hall, Inc. New Jersey, 1974 ed.) and appropriate statistical analysis performed.
- the desired volume of the darkened chamber was one (1) liter.
- the physical requirements of the collection tube transparent, preferably conical and allowing migrating animals to exceed 48° to the normal
- a tube which measured 1′′(D) ⁇ 8′′(L) had a maximum volume of 75 mls, and exceeded the 48° angular criteria at a volume of approximately 50 mls was used.
- a stopper was used to provide a temporary physical separation between the chamber and the collection tube.
- the separation time and volume of the zooplankton and/or phytoplankton samples to be collected were undetermined. Experiments were designed to evaluate the device performance for separation of zooplankton with samples from Lake Cochichewick (August 1) using the methods described in Steps 1-2 and Steps 4-5.
- the first experiment (August 1) was designed to evaluate separation efficiencies for zooplankton using the methods described in Steps 1-2 and 4-5.
- the experimental design was modified to evaluate separation efficiencies using the methods described in Steps 1-5. Additional experiments were conducted using samples from Lake Cochichewick (September 4) and Willand Pond (September 5) with the results shown in FIG. 3A and FIG. 3B .
- the macrozooplankton consistently had the highest mean separation efficiency for both lakes.
- the macrozooplankton comprised 89% of the biomass in Lake Cochichewick and 71% of the biomass in Willand Pond.
- FIG. 4A and FIG. 4B are plots showing calibration curve for macrozooplankton (solid line), cyanobacteria (dashed line), and all phytoplankton (dotted line) for Lake Cochichewick (A) and Willand Pond (B) on Sep. 4 and Sep. 5, 2013, respectively. Confidence intervals are shown in gray.
- FIG. 5A and FIG. 5B compare the September calibration curves with data from samples taken in October for Lake Cochichewick ( FIG. 5A ) and Willand Pond ( FIG. 5B ).
- the macrozooplankton comprised 93% of the biomass in Lake Cochichewick and 91% of the biomass in Willand Pond.
- FIGS. 4A and 4B suggest that, in this context, the researcher should wait 30 minutes before the collection of a 50 ml zooplankton sample, and then collect the remaining 900 mls for a cyanobacterial sample.
- Ambient light was used to simulate the spectral distribution of irradiance in the natural system.
- Filtered lake water was used to address issues related to dissolved substances and the response of the zooplankton to rapid changes in water temperature.
- the design of the separation device with the completely darkened chamber and a transparent collection tube located at a 90 degree vertical position allows for direct illumination which has an angular distribution that approximates 0 (zero).
- the design of the separation device with a completely darkened chamber and transparent collection tube provides the conditions to initiate a positive phototactic response to a sudden change in light intensity (Buchanan, C. B. Goldberg and R. McCartney 1982, “A laboratory method for studying zooplankton swimming behaviors,” Hydrobiologic 94, 77-89). Although measurements of the light intensity were not taken during these experiments, it was assumed that the light intensity exceeds the threshold for instantaneous relative change in light intensity of 0.2 uE m-2 s-1 (the rheobase) necessary for photobehavior to occur.
- the orientation of the device serves to facilitate and reinforce body axis orientation which results from a response to the spatial change in light intensity (light/dark boundaries, contrast and shadows). Daphnia magna have been shown to orient their movements away from overhead shadows as a flight response from predators.
- the length of the separation device and the volume of the zooplankton sample to be collected are determined for migration potential and contrast orientation. By creating a sudden stimulus of dark to light to maximize migration rates, the maximum migration distance of 42 cm was achieved within a specified time. Additionally, by leveraging the influence of contrast orientation by driving the zooplankton past the angle of 48° to the normal, optimal conditions were achieved. The optimum volume to be collected using this collection tube was determined to be 50 mls.
- data is presented from two separation devices.
- Prototype #1 Design elements The device contained design elements as shown in FIG. 1A .
- the darkened chamber was smooth walled and conical in shape, with a volume of 1 L.
- the chamber was constructed to prevent light from entering the chamber during the separation phase (tight fitting lid as needed).
- a stopper was used to provide a temporary physical separation between the chamber and the collection tube.
- the transparent collection tube allowed for the maximum amount of illumination and was conical in shape to facilitate the collection of zooplankton.
- the length of the collection tube was such that the zooplankton could migrate past a 45° angle to the vertical plane within the tube.
- a tube was used with maximum diameter (21.5 mm), minimum diameter (5 mm), length of 150 mm and a maximum volume of 75 mls with rubber tubing (diameter 7 mm) and a clamp. External support to the device was provided via external rings and a sling device.
- Prototype #2 design elements The device contained design elements as shown in FIG. 1D .
- the design was modified to reduce the variability in separation efficiency and to simplify sample handling. It was assumed there was potential for leakage around the rubber stopper and mixing during its removal, thereby increasing the amount of phytoplankton found in the zooplankton sample.
- an adapter with a minimum diameter of 20 mm was used as the temporary darkened physical separation. This was a diameter sufficient to allow for a narrow stimulus beam of light to be refracted at an angle approximating 45° (or less) to the vertical plane and to meet the spatial needs of the migrating zooplankton.
- the conical collection tube, rubber tubing and clamp was replaced with a cylindrical collection cartridge (25 mm diameter) that would continue to meet the spatial needs of the migrating zooplankton and simplify sample handling. Rings were added to provide options for external support.
- Lake Cochichewick in North Andover, Mass., USA (42° 19.7′N: 71°54.9′W) and Willand Pond in Dover, N.H., USA (43° 43.2′N: 70°29.6′W).
- Lake Cochichewick is classified as a mesotrophic system and Willand Pond is classified as an oligotrophic system (Carlson, 1977).
- the deep sites were accessed by kayak.
- the total number of samples collected depended upon the number of trials to be conducted that day. For example, if 12 trials were to be conducted, 12 samples would be collected.
- the concentrated plankton samples were placed together in 1 L darkened HDPE (high density polyethylene) bottles. Typically 8-10 concentrated samples would be collected in a single bottle, and 2 bottles of concentrate collected for testing.
- HDPE high density polyethylene
- Filtered lake water was prepared by filtering 1 L of whole lake water through a 50 um mesh ring net and placing it in a 1 L beaker. Prior to use in the separation device, filtered lake water samples were analyzed following Step 3 below.
- Protoype #1 The separation device was suspended using a sling apparatus. The collection tube was closed off using the ratchet clamp, and filled with filtered lake water. The collection tube was physically separated from the chamber with the use of a black rubber stopper attached to a plastic rod. The plankton sample was poured into the chamber. The rubber stopper was removed, the lid placed on top of the chamber and the timer set for the desired time interval. When volume series, time series or calibration series were conducted, as many separation devices as needed were prepared in this manner concurrently. For example, when a time series for 0, 10, 20 and 30 minutes was conducted, 4 separation devices were prepared.
- Prototype #2 The collection cartridge was attached to the end of the adapter, filled with filtered lake water and then closed. The plankton sample was placed into the chamber. The adapter/collection tube was screwed onto the chamber, which was then suspended with a sling. The adapter was opened and the timer set for the desired time interval.
- Prototype #1 At the desired time interval, the desired volume of sample was released from the collection tube by opening the ratchet clamp, dispensing the sample into a 100 ml sample jar, and then closing the ratchet clamp. This sample was marked as the “Z” (zooplankton) portion. The remainder of the sample was released from the collection tube by opening the ratchet clamp and dispensing the sample into a 1 L carboy. This sample was marked as the “P” (phytoplankton) portion
- Prototype #2 At the desired time interval, the adapter was closed and the collection cartridge removed from the bottom of the adapter. The sample was dispensed into a 100 ml sample jar and marked as the “Z” (zooplankton) portion. The chamber was then inverted and the adapter removed. This sample was marked as the “P” (phytoplankton) portion.
- Phycocyanin (PC) and Chlorophyll (a) (Chla) for the “Z” portion and “P” portion were quantified using a two-channel hand held AquaFluor fluorometer (Turner Designs). Using a disposable pipette 5 mls of each “Z” portion and “P” portion was placed into a 5 ml vial, frozen and then thawed. The thawed sample was placed into a methacrylate cuvette. The filled cuvette was placed in the fluorometer and using channel A, the relative fluorescence units for PC were recorded. Without removing the cuvette from the instrument, channel B was selected and relative fluorescence units for Chla were recorded.
- PC Phycocyanin
- a Chlorophyll
- the PC and Chla value of the “Z” portion was adjusted (Adj. Z) to account for the background in the filtered water.
- the MIC eq. and Chla concentrations/ml were adjusted to reflect the volumes collected.
- the remaining “Z” portion was preserved using 5% formalin/sucrose (Haney & Hall, 1973).
- the remaining “P” portion was filtered through a 50 um mesh ring net, backwashed with a wash bottle filled with filtered lake water, brought to an appropriate volume using filtered lake water, and preserved using 5% formalin/sucrose.
- Zooplankton in each “Z” and “P” sample were identified, enumerated and measured using an Amscope T370B-9M compound microscope, a 9.1 megapixel USB 2.0 digital camera, Amscope Version 3.7 digital imaging software and an IBM Think pad.
- a minimum of 200 individuals were counted in a known subsample volume.
- the body length (and width as needed) of the first 20 individuals for each genus and/or species was measured. If needed, the count data of the “P” portion was adjusted (Adj. P) to reflect the proportions of sample removed in Step 3 to quantify phycocyanin and Chlorophyll (a).
- the count data for the “Z” and “P” portion were adjusted to reflect the total sample volume.
- Dry weight estimates of biomass for cladocerans ( Daphnia spp., Diaphanosoma and Bosmina ) and copepods and were calculated according to Bottrell (1976). Dry weight estimates of biomass for the cladoceran Chydorus sphericus . was calculated according to Dumont (1975). All nauplii were assigned a constant dry weight of 0.40 ug. Dry weight estimates of biomass for rotifers were calculated according to EPA (2003). Values recorded included “Macrozooplankton” and “Microzooplankton”. Zooplankton included as “Macrozooplankton” considered the findings of Lampert, W. and B. E.
- FIGS. 7A and 7B show the separations for macrozooplankton, microcystis equivalents and chlorophyll(a) for Lake Cochichewick.
- the mean values for macrozooplankton ranged between 90-95% (September) and 82-89% (October).
- the mean values for microcystis equivalents ranged between 3-5% (September) and 1-5% (October), while the chlorophyll(a) values ranged from 2-3% (September) and 6-9% (October).
- the macrozooplankton found in Lake Cochichewick in September and October included Diaphanosoma brachyurum, Diaptomus spp. and Microcyclops rubellus .
- FIGS. 7C and 7D show the separations for macrozooplankton, microcystis equivalents and chlorophyll(a) for Willand Pond.
- the mean values for macrozooplankton ranged between 81-89% (September) and 79-84% (October).
- the mean values for microcystis equivalents ranged between 3-8% (September) and 5-14% (October), while the chlorophyll(a) values ranged from 3-11% (September) and 6-17% (October).
- the macrozooplankton found in Willand Pond in September and October included Daphnia ambigua, Daphnia catawba, Diaptomus spp. and Mesocyclops edax.
- FIGS. 8A, 8B, 8C and 8D offer a comparison of the 2013 and 2014 experiments.
- Lake Cochichewick separation efficiencies for macrozooplankton (78-89%), microcystis equivalents (4-5%) and chlorophyll(a) (4%) were observed.
- Willand Pond separation efficiencies for macrozooplankton (69-83%), microcystis equivalents (4-6%) and chlorophyll(a) (3%) were observed.
- FIG. 9 provides evidence as to the importance of the spatial needs of the migrating zooplankton.
- This experiment evaluated the effect of the minimum diameter of the adapter that provided the temporary darkened physical separation.
- the experiments were conducted with ambient and artificial light, as well as adapters with minimum diameters of 20 mm and 13 mm.
- the 20 mm adapter it was noted that the animals migrated freely, appearing in the collection cartridge within a minute of opening the ball valve.
- 2 of the 3 collection cartridges did not have any zooplankton in them after as many as 5 minutes. The cartridges needed to be gently tapped to release the animals that were apparently clogging the opening.
- FIG. 10 provides a summary of the individual zooplankter behavior that was observed in samples taken from Lake Cochichewick and Willand Pond in 2014. These are comparable to those previously observed as shown in Table 1 of FIG. 11 and Table 2 of FIG. 12 , respectively.
- a positive phototactic response could be anticipated as a result of exposure to a narrow stimulus beam (Forward, R. B. Jr., 1988, “Diel vertical migration: Zooplankton photobiology and behavior,” Oceanogr. Mar. Biol. Annu. Rev., 26: 361-393) (highly directional light) with an angular light distribution that approximates 0° (Schallek, W., 1942, “The vertical migration of the copepod Acartia tonsa under controlled illumination,” Biological Bulletin, 84:98-106).
- Body axis orientation would result from dorsal beam contrast (45° or less) (Ringelberg, J., 1964, “The positively phototactic reaction of Daphnia magna Straus: a contribution to the understanding of diurnal vertical migration,” Neth. J. Sea Res. 2:319-406) (Ringelberg, J., B. J. G. Flik and R. C. Buis, 1975, “Contrast orientation in Daphnia magna and its significance for vertical plane orientation in the pelagic biotope in general,” Neth. J. Zool., 25:454-475) that would control the direction of movement in the vertical plane.
- the orientation of the device (darkened above, light below) serves to reinforce body axis orientation as a flight response from predators.
- the volume of the zooplankton sample to be collected needed to consider migration potential and contrast orientation. By creating a sudden stimulus of dark to light to maximize migration rates, (Buchanan, Goldberg and McCartney 1982) it could be ensured that the maximum migration distance of 42 cms could be achieved within a specified time (Daan & Ringelberg 1969). Additionally, it was needed to leverage the influence of contrast orientation by driving the zooplankton past the angle of 48° to the normal. The optimum volume to be collected using a collection tube was determined to be 50 mls.
- the device is easily assembled and can be used to obtain well separated in situ samples of phytoplankton and zooplankton.
- the samples can easily be processed on site, thereby reducing valuable time either in the field or in the laboratory. Issues related to sample handling and transport were considered, and how that might affect the design of the collection tubes.
- Collection tubes containing samples of live zooplankton can be sealed with a cap and easily transported.
- the phytoplankton can be easily transported by placing a cap on the darkened chamber.
- dried zooplankton and phytoplankton samples can be obtained while in the field. This would also reduce the possibility of bacterial contaminations of the samples.
- Filter cones and modified collection tubes were developed to allow for the discharge of water.
- the filter cones can be placed in drying chambers for 2-8 hours and then placed into desiccators.
- the composition and distribution of the biomass had an influence on the separation efficiencies that were observed. It is also possible that lake trophic status exerts a significant influence on separation efficiency.
- the level (5% or less) of incidental capture of the phytoplankton is puzzling, specifically the cyanobacteria, in the zooplankton samples. It is assumed that what is observed as incidental capture is a result of depuration as the zooplankton move from an environment of high concentration of phytoplankton to a lower concentration.
- the phytoplankton information could be used to provide a profile of exposure potential across a range of waterbodies and to support decisions regarding use attainability.
- the zooplankton information could be used to quantify transfer between the two trophic levels and provide insight into the potential for further bioaccumulation.
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Abstract
Description
(Adj. Mic. eq. “Z”)I(Adj. Mic. eq. “Z”)+(Mic. eq. “P”)=Separation efficiency for cyanobacteria Eq. 1
(Adj.Chl(a)“Z”)/(Adj. Chl(a)“Z”)+(Chl(a)“P”)=Separation efficiency for phytoplankton Eq, 2
(Dry wt. “Z”)/(Dry wt. “Z”)+(Dry wt.(Adj.)“P”)=Biomass separation efficiency for zooplankton Eq. 3
Adj. MIC eq. “Z”/Adj. MIC eq. “Z”+MIC eq. “P”=Separation efficiency for cyanobacteria (1)
Adj. Chla “Z”/Adj. Chla “Z”+Chla “P”=Separation efficiency for phytoplankton (2)
Dry wt. “Z”/Dry wt. “Z”+Dry wt. Adj. “P”=Zooplankton biomass separation efficiency (3)
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US10227580B2 (en) | 2014-02-06 | 2019-03-12 | Nancy Leland | Method and device for plankton separation |
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US20150218548A1 (en) | 2015-08-06 |
US10227580B2 (en) | 2019-03-12 |
US20170067043A1 (en) | 2017-03-09 |
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