US20230285366A1 - Spiro-lactam compounds, process and uses thereof - Google Patents

Spiro-lactam compounds, process and uses thereof Download PDF

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US20230285366A1
US20230285366A1 US18/299,404 US202318299404A US2023285366A1 US 20230285366 A1 US20230285366 A1 US 20230285366A1 US 202318299404 A US202318299404 A US 202318299404A US 2023285366 A1 US2023285366 A1 US 2023285366A1
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virus
hiv
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human immunodeficiency
bss
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Teresa Margarida Vasconcelos Dias de Pinho e Melo
Bruna C. SUZANO SANTOS
Inês BÁRTOLO
Rui Miguel PRUDÊNCIO PIGNATELLI
Nuno Eduardo MOURA DOS SANTOS DA COSTA TAVEIRA
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Egas Moniz - Cooperativa De Ensino Superior Crl
Universidade de Coimbra
Instituto de Medicina Molecular Joao Lobo Antunes
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Egas Moniz - Cooperativa De Ensino Superior Crl
Universidade de Coimbra
Instituto de Medicina Molecular Joao Lobo Antunes
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Assigned to UNIVERSIDADE DE COIMBRA, INSTITUTO DE MEDICINA MOLECULAR, EGAS MONIZ - COOPERATIVA DE ENSINO SUPERIOR, CRL reassignment UNIVERSIDADE DE COIMBRA ASSIGNMENT OF ASSIGNORS INTEREST (SEE DOCUMENT FOR DETAILS). Assignors: C. SUZANO SANTOS, Bruna, MOURA DOS SANTOS DA COSTA TAVEIRA, Nuno Eduardo, BÁRTOLO, Inês, PRUDÊNCIO PIGNATELLI, Rui Miguel, VASCONCELOS DIAS DE PINHO E MELO, Teresa
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    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00Medicinal preparations containing organic active ingredients
    • A61K31/33Heterocyclic compounds
    • A61K31/395Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
    • A61K31/41Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having five-membered rings with two or more ring hetero atoms, at least one of which being nitrogen, e.g. tetrazole
    • A61K31/425Thiazoles
    • A61K31/429Thiazoles condensed with heterocyclic ring systems
    • A61K31/43Compounds containing 4-thia-1-azabicyclo [3.2.0] heptane ring systems, i.e. compounds containing a ring system of the formula, e.g. penicillins, penems
    • A61K31/431Compounds containing 4-thia-1-azabicyclo [3.2.0] heptane ring systems, i.e. compounds containing a ring system of the formula, e.g. penicillins, penems containing further heterocyclic rings, e.g. ticarcillin, azlocillin, oxacillin
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D499/00Heterocyclic compounds containing 4-thia-1-azabicyclo [3.2.0] heptane ring systems, i.e. compounds containing a ring system of the formula:, e.g. penicillins, penems; Such ring systems being further condensed, e.g. 2,3-condensed with an oxygen-, nitrogen- or sulfur-containing hetero ring
    • C07D499/90Heterocyclic compounds containing 4-thia-1-azabicyclo [3.2.0] heptane ring systems, i.e. compounds containing a ring system of the formula:, e.g. penicillins, penems; Such ring systems being further condensed, e.g. 2,3-condensed with an oxygen-, nitrogen- or sulfur-containing hetero ring further condensed with carbocyclic rings or ring systems
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00Medicinal preparations containing organic active ingredients
    • A61K31/33Heterocyclic compounds
    • A61K31/395Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00Medicinal preparations containing organic active ingredients
    • A61K31/33Heterocyclic compounds
    • A61K31/395Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
    • A61K31/41Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having five-membered rings with two or more ring hetero atoms, at least one of which being nitrogen, e.g. tetrazole
    • A61K31/425Thiazoles
    • A61K31/429Thiazoles condensed with heterocyclic ring systems
    • A61K31/43Compounds containing 4-thia-1-azabicyclo [3.2.0] heptane ring systems, i.e. compounds containing a ring system of the formula, e.g. penicillins, penems
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K45/00Medicinal preparations containing active ingredients not provided for in groups A61K31/00 - A61K41/00
    • A61K45/06Mixtures of active ingredients without chemical characterisation, e.g. antiphlogistics and cardiaca
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P31/00Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
    • A61P31/12Antivirals
    • A61P31/14Antivirals for RNA viruses
    • A61P31/18Antivirals for RNA viruses for HIV
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P33/00Antiparasitic agents
    • A61P33/02Antiprotozoals, e.g. for leishmaniasis, trichomoniasis, toxoplasmosis
    • A61P33/06Antimalarials
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D513/00Heterocyclic compounds containing in the condensed system at least one hetero ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for in groups C07D463/00, C07D477/00 or C07D499/00 - C07D507/00
    • C07D513/02Heterocyclic compounds containing in the condensed system at least one hetero ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for in groups C07D463/00, C07D477/00 or C07D499/00 - C07D507/00 in which the condensed system contains two hetero rings
    • C07D513/04Ortho-condensed systems
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D513/00Heterocyclic compounds containing in the condensed system at least one hetero ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for in groups C07D463/00, C07D477/00 or C07D499/00 - C07D507/00
    • C07D513/12Heterocyclic compounds containing in the condensed system at least one hetero ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for in groups C07D463/00, C07D477/00 or C07D499/00 - C07D507/00 in which the condensed system contains three hetero rings
    • C07D513/20Spiro-condensed systems
    • YGENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02ATECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
    • Y02A50/00TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE in human health protection, e.g. against extreme weather
    • Y02A50/30Against vector-borne diseases, e.g. mosquito-borne, fly-borne, tick-borne or waterborne diseases whose impact is exacerbated by climate change

Definitions

  • the present disclosure relates to a new class of antimicrobial agents.
  • this disclosure provides the identification and characterization of novel spiro-lactams compounds as anti-HIV/AIDS and anti-malarial agents.
  • this disclosure also provides the preparation of spiro- ⁇ -penicillanic acids, which proved to be potent inhibitors of HIV.
  • the present disclosure relates to spiro-2-pyrazoline- ⁇ -lactam derivatives with the general formula I, spiro-3H-pyrazole- ⁇ -lactam derivatives with the general formula, II, spirocycloprpyl- ⁇ -lactam derivatives with the general formula III, spiro-1-pyrazoline- ⁇ -lactam derivatives with the general formula IV, spiro-2-pyrazoline- ⁇ -lactam derivatives with the general formulae V and VI, and spirocyclopentenyl- ⁇ -lactam derivatives with the general formulae VII and VIII, with remarkable anti-HIV and anti- Plasmodium properties.
  • HIV-1 and HIV-2 are the causative agents of AIDS, a cureless mortal disease that affects almost 37 million individuals worldwide.
  • 1 HIV enters the cells after binding to the CD4 molecule and to the chemokine co-receptors CCR5 and/or CXCR4 that are expressed at the surface of many cell types (e.g. lymphocytes, macrophages, dendritic cells).
  • 2 Usually infection is established with a CCR5-tropic strain (R5 isolates), but as the disease progresses and the CD4 + T cells number declines, CXCR4-tropic isolates (X4) emerge in the majority of individuals.
  • Antiretroviral therapy for HIV infection leads to suppression of viral replication, increasing the number of CD4 + T lymphocytes, thereby preventing AIDS-related complications and prolonging life.
  • 4 Antiretroviral agents in clinical use belong to 5 different classes: nucleos(t)ides reverse transcriptase inhibitors, non-nucleoside reverse transcriptase inhibitors, protease inhibitors, fusion inhibitor (Maraviroc-CCR5 antagonist; currently there is no CXCR4 antagonist in clinical use); fusion inhibitor (Enfuvirtide), and integrase inhibitors.
  • Current drug regimens do not fully restore health 5 and the rapid emergence of drug resistant strains 6 indicates the need for new and better antiretroviral drugs.
  • Malaria is caused by protozoan parasites of the Plasmodium genus, five species of which, P. falciparum, P. ovale, P. vivax, P. malariae and P. knowlesi , are able to cause infection in humans. Malaria remains a daunting public health problem, which primarily affects the poorest regions of the world, killing nearly half a million people annually, with over 3 billion people at constant risk of infection 7 . It was estimated that in 2015 there were 214 million cases of malaria, resulting in 438,000 deaths, most of them in sub-Saharan Africa.
  • Mammalian infection by Plasmodium parasites occurs upon injection of sporozoites through the bite of infected female Anopheles mosquitoes. Injected sporozoites travel to their host's liver, where they invade and develop extensively inside hepatocytes. Hepatic infection culminates in the release of red blood cell (RBC)-infective merozoites into the blood stream, where they cyclically infect RBCs, giving rise to malaria symptoms and originating gametocytes that warrant the progress of infection onto the mosquito vector 8 .
  • RBC red blood cell
  • Current tools for malaria control are precarious and recent calls have been made for developing new or repurposing existing drugs as valuable interventions to help control infection 9 .
  • primaquine has significant and potentially lethal side effects in patients with glucose-6-phosphate dehydrogenase enzyme deficiency, a genetic trait quite common in regions where malaria is endemic.
  • primaquine cannot be given to pregnant women because of its toxic effects on the foetus. Due to all these limitations, it is urgent to identify new drugs capable of eliminating the parasite during the liver phase of its life cycle. Such drugs would have the potential to serve not only as effective prophylactics against malaria, but also to be used to achieve radical cure of infections by P. vivax and P. ovale 11 .
  • Plasmodium and HIV There is considerable geographic overlap between Plasmodium and HIV. This is particularly the case in sub-Saharan Africa, due to the presence of factors that favor transmission of either pathogen, including poverty 12 . Thus, co-infection with Plasmodium and HIV is common in that region and contributes to the spread of both diseases 13 . HIV has been shown to increase the risk of development of severe P. falciparum malaria 14 , while malaria has been associated with a decline in CD4 + T cell number 14d , enhanced HIV-1 replication 15 and increased HIV transmission 13a .
  • Lactam compounds are cyclic amides of varying ring sizes, such as ⁇ , ⁇ , ⁇ and ⁇ lactam compounds.
  • the ⁇ -lactam ring is the core structure of important pharmacologically active compounds, such as penicillins and cephalosporins.
  • Spiro- ⁇ -lactams are also interesting target molecules since some derivatives exhibit relevant biological properties, namely, cholesterol absorption inhibition, antibacterial activity, ⁇ -lactamase inhibition and antimalarial activity.
  • spiro- ⁇ -lactam derivatives showing antiviral activity.
  • the spirocyclic structural motif seems to be particularly interesting regarding the antiviral activity since other spiro-compounds, namely spirocyclic pyrrolidones and spiropiperidine derivatives, are inhibitors of HIV.
  • some monocyclic ⁇ -lactams have proven to be inhibitors of HIV-1 protease. 21 Therefore, the search for new spiro- ⁇ -lactams derivatives as potential inhibitors of HIV is a relevant research target.
  • the present disclosure relates to a novel class of potent inhibitors of CCR5- and CXCR4-tropic HIV strains, based on spiro- ⁇ -lactam derivatives, spiro- ⁇ -lactam derivatives and spiro- ⁇ -lactam derivatives.
  • this new class of antiviral compounds based in particular on spiro- ⁇ -lactam derivatives may be useful for treating HIV infection either alone or in combination with antiretroviral drugs belonging to other classes, e.g. integrase inhibitors, reverse transcriptase inhibitors, protease inhibitors and fusion inhibitors.
  • antiretroviral drugs belonging to other classes e.g. integrase inhibitors, reverse transcriptase inhibitors, protease inhibitors and fusion inhibitors.
  • this new class of antiviral compounds based on spiro- ⁇ -lactam derivatives may be useful for preventing HIV infection, in particular in pre-exposure or post-exposure prophylaxis, either alone or in combination with antiretroviral drugs belonging to other classes, e.g. integrase inhibitors, reverse transcriptase inhibitors, protease inhibitors and fusion inhibitors.
  • antiretroviral drugs belonging to other classes e.g. integrase inhibitors, reverse transcriptase inhibitors, protease inhibitors and fusion inhibitors.
  • the spiro- ⁇ -lactam derivative named BSS-730A has potent anti-HIV activity, leading to inhibition of about 100% of the replication of both CCR5-tropic isolates and CXCR4-tropic isolates at a concentration of 15.2 ⁇ M.
  • the spiro- ⁇ -lactam derivative named BSS-730A may be useful for treating HIV infection either alone or in combination with antiretroviral drugs belonging to other classes (e.g. integrase inhibitors, reverse transcriptase inhibitors, protease inhibitors and fusion inhibitors) in all types of pharmaceutical formulations (e.g. pills, syrup).
  • antiretroviral drugs belonging to other classes e.g. integrase inhibitors, reverse transcriptase inhibitors, protease inhibitors and fusion inhibitors
  • pharmaceutical formulations e.g. pills, syrup.
  • the spiro- ⁇ -lactam derivative named BSS-730A may be useful for preventing HIV infection, in particular pre-exposure or post-exposure prophylaxis either alone or in combination with antiretroviral drugs belonging to other classes (e.g. integrase inhibitors, reverse transcriptase inhibitors, protease inhibitors and fusion inhibitors) in all types of pharmaceutical formulations (e.g. gels, rings, pills, syrup).
  • antiretroviral drugs belonging to other classes e.g. integrase inhibitors, reverse transcriptase inhibitors, protease inhibitors and fusion inhibitors
  • pharmaceutical formulations e.g. gels, rings, pills, syrup.
  • the class of spiro- ⁇ -lactam derivatives now disclosed may combine anti-HIV and anti- Plasmodium activities.
  • the class of spiro- ⁇ -lactam derivatives now disclosed may be useful for treating malaria.
  • the class of spiro- ⁇ -lactam derivatives now disclosed may be useful for preventing malaria.
  • the class of spiro- ⁇ -lactam derivatives now disclosed may be useful for treating patients co-infected with Plasmodium and HIV.
  • the synthetic route spiro-2-pyrazoline- ⁇ -lactam derivatives with the general formula I, more particularly, (2S,3′R,5R)-3,3-dimethyl-7-oxo-2′,4′-dihydro-4-thia-1-azaspiro[bicyclo[3.2.0]heptane-6,3′-pyrazole]-2-carboxylic acids
  • R 1 is an ester groups or R 1 is an acetyl group.
  • the synthetic route to spiro-3H-pyrazole- ⁇ -lactam derivatives with the general formula II, more particularly, (2S,3′R,5R)-3,3-dimethyl-7-oxo-4-thia-1-azaspiro[bicyclo[3.2.0]heptane-6,3′-pyrazole]-2-carboxylic acids is particularly, (2S,3′R,5R)-3,3-dimethyl-7-oxo-4-thia-1-azaspiro[bicyclo[3.2.0]heptane-6,3′-pyrazole]-2-carboxylic acids.
  • the half maximal inhibitory concentration (IC 50 ) is a measure of the effectiveness of a substance in inhibiting a specific biological or biochemical function. This quantitative measure indicates how much of a particular substance (inhibitor) is needed to inhibit a given biological process (or component of a process, i.e. an enzyme, cell, cell receptor or microorganism) by half. The values are typically expressed as molar concentration. It is commonly used as a measure of antagonist drug potency in pharmacological research. According to the FDA, IC 50 represents the concentration of a drug that is required for 50% inhibition in vitro. It is comparable to an EC 50 for agonist drugs. EC 50 also represents the plasma concentration required for obtaining 50% of a maximum effect in vivo.
  • the 90% inhibitory concentration (IC 90 ) is a measure of the effectiveness of a substance in inhibiting a specific biological or biochemical function. This quantitative measure indicates how much of a particular substance (inhibitor) is needed to inhibit a given biological process (or component of a process, i.e. an enzyme, cell, cell receptor or microorganism) by 90%. The values are typically expressed as molar concentration. It is commonly used as a measure of antagonist drug potency in pharmacological research. It is comparable to an ECW for agonist drugs. EC 90 also represents the plasma concentration required for obtaining 90% of a maximum effect in vivo.
  • Cytotoxic concentration 50% is defined as the concentration of the drug that causes death of 50% of viable cells.
  • In vitro therapeutic index is defined as the ratio between the CC 50 and IC 50 concentrations.
  • MPI Maximum percentage of inhibition
  • the lactam ring may be a ⁇ -lactam ring, a ⁇ -lactam ring or a ⁇ -lactam ring.
  • the heterocyclic ring or carbocyclic ring may be selected from a pyrazoline ring, a 3H-pyrazole ring, a cyclopropyl ring, a 1-pyrazoline ring, a 2-pyrazoline ring or a cyclopentenyl ring, in particular the heterocyclic ring or carbocyclic ring may comprise a phenyl group, an acetyl group, a benzoyl group or a carboxylate group.
  • the compound may be selected from:
  • any of the compounds now disclosed may be for use in the treatment or therapy or prevention or suppression of infectious diseases, in particular wherein the infectious diseases are caused by disease-causing agents, in particular pathogenic agents, selected from a virus, a mycoplasm, or a protozoan, or mixtures thereof.
  • infectious diseases are caused by disease-causing agents, in particular pathogenic agents, selected from a virus, a mycoplasm, or a protozoan, or mixtures thereof.
  • the infectious disease may be acquired immunodeficiency syndrome (AIDS), malaria, leishmaniasis, hepatitis A, hepatitis B, hepatitis C, hepatitis D or hepatitis E, herpes simplex, human papillomavirus infection, severe acute respiratory syndrome.
  • AIDS acquired immunodeficiency syndrome
  • malaria leishmaniasis
  • hepatitis A hepatitis B
  • hepatitis C hepatitis D or hepatitis E
  • herpes simplex herpes simplex
  • human papillomavirus infection severe acute respiratory syndrome.
  • the infectious disease may be caused by an agent selected from: human immunodeficiency virus, human immunodeficiency virus-2 group A, human immunodeficiency virus-2 group B, human immunodeficiency virus-1 group M, human immunodeficiency virus-1 groups O, human immunodeficiency virus-1 group N, human immunodeficiency virus-1 group P, hepatitis A virus, hepatitis B virus, hepatitis C virus, hepatitis D virus, hepatitis E virus, herpes simplex virus 1, herpes simplex virus 2, human filovirus, togavirus, alphavirus, arenavirus, bunyavirus, flavivirus, human papillomavirus, human influenza A virus, Asian flu virus, herpes zoster leischmania or severe acute respiratory syndrome coronavirus.
  • an agent selected from: human immunodeficiency virus, human immunodeficiency virus-2 group A, human immunodeficiency virus-2 group B, human immunodeficiency virus-1 group M, human immuno
  • the protozoan may be selected from Plasmodium falciparum, Plasmodium ovale, Plasmodium vivox, Plasmodium malariae and/or Plasmodium knowlesi.
  • any of the compounds now disclosed may be used in the simultaneous therapy or treatment of infectious diseases and wherein said infectious diseases are acquired immunodeficiency syndrome and malaria, in particular said compound may be at least one of the following list:
  • infectious diseases are acquired immunodeficiency syndrome and malaria.
  • the present disclosure also relates to compound of formula I
  • the lactam ring may be a ⁇ -lactam ring, a ⁇ -lactam ring or a ⁇ -lactam ring.
  • the heterocyclic ring or carbocyclic ring may be selected from a pyrazoline ring, a 3H-pyrazole ring, a cyclopropyl ring, a 1-pyrazoline ring, a 2-pyrazoline ring or a cyclopentenyl ring.
  • the heterocyclic ring or carbocyclic ring may comprise a phenyl group, an acetyl group, a benzoyl group or a carboxylate group.
  • the compound may be any organic compound. In an embodiment, and to obtain even better results, the compound may be any organic compound.
  • the compound may be any organic compound. In an embodiment, and to obtain even better results, the compound may be any organic compound.
  • the compound may be any organic compound. In an embodiment, and to obtain even better results, the compound may be any organic compound.
  • the compound may be any organic compound. In an embodiment, and to obtain even better results, the compound may be any organic compound.
  • This disclosure also relates to a pharmaceutical composition
  • a pharmaceutical composition comprising at least one of the compounds now disclosed in a therapeutically effective amount and as a first active ingredient, a pharmaceutically acceptable carrier or excipient, and a second active ingredient.
  • the pharmaceutical composition may further comprise an anti-viral agent, an anti-malarial agent, an immunomodulator agent, an analgesic agent, an anti-inflammatory agent, an antibiotic agent or a diuretic agent.
  • the antiviral agent is an anti-HIV agent.
  • the pharmaceutical composition may further comprise a filler, a binder, a disintegrant and/or a lubricant, or mixtures thereof.
  • the pharmaceutical composition may be suitable for administration once per day to an infected human or mammal.
  • the pharmaceutical composition may be for use by oral administration or injectable administration.
  • the pharmaceutical composition may further comprise a pharmaceutically acceptable carrier or excipient selected from pregelatinized starch, povidone, lactose monohydrate, microcrystalline cellulose, magnesium stearate, or combinations thereof.
  • the pharmaceutical composition may comprise a second or a further active ingredient selected from a list comprising a HIV protease inhibitor (PI), a HIV nucleoside reverse transcriptase inhibitor (NRTI, or HIV nucleoside-analogue reverse transcriptase inhibitor NARTI), a HIV non-nucleoside reverse transcriptase inhibitor (NNRTI or HIV non-nucleoside analogue reverse transcriptase inhibitor), a HIV integrase inhibitor, or mixtures thereof.
  • PI HIV protease inhibitor
  • NRTI HIV nucleoside reverse transcriptase inhibitor
  • NARTI HIV nucleoside-analogue reverse transcriptase inhibitor
  • NRTI HIV non-nucleoside reverse transcriptase inhibitor
  • a HIV integrase inhibitor or mixtures thereof.
  • the pharmaceutical composition may comprise an anti-malarial agent selected from artemisin, 8-aminoquinoline, amodiaquine, arteether, artemether, artemsinin, artesunate, artesunic acid, artelinic acid, atovoquone, azithromycine, biguanide, chloroquine, chloroquine phosphate, chlorproguanil, cycloguanil, dapsone, desbutyl halofantrine, desipramine, doxycycline, dihydrofolate, reductase inhibitors, dipyridamole, halofantrine, haloperidol, hydroxychloroquine sulfate, imipramine, mefloquine, penfluridol, phospholipid inhibitors, primaquine, proguanil, pyrimethamine, pyronaridine, quinine, quinidine, quinacrineartemisinin, sulfonamides, sul
  • the pharmaceutical composition may comprise an anti-HIV agent selected from a list comprising tenofovir disoproxil fumarate, alafenamide, emtricitabine, atazanavir/sulfate, lopinavir/ritonavir, efavirenz, or combinations thereof.
  • an anti-HIV agent selected from a list comprising tenofovir disoproxil fumarate, alafenamide, emtricitabine, atazanavir/sulfate, lopinavir/ritonavir, efavirenz, or combinations thereof.
  • this disclosure also relates to a kit comprising any of the compounds and/or a pharmaceutical composition as now disclosed.
  • heterocyclic ring denotes a ring wherein at least one of the atoms forming the ring backbone is other than carbon. Unless otherwise indicated, a heterocyclic ring can be a saturated, partially unsaturated, or fully unsaturated ring. “Saturated heterocyclic ring” refers to a heterocyclic ring containing only single bonds between ring members. “Partially saturated heterocyclic ring” refers a non-aromatic heterocyclic ring containing at least one double bond. The term “heteroaromatic ring” denotes a fully unsaturated aromatic ring in which at least one atom forming the ring backbone is not carbon.
  • heteroaromatic ring typically contains no more than 4 nitrogens, no more than 1 oxygen and no more than 1 sulfur. Unless otherwise indicated, heteroaromatic rings can be attached through any available carbon or nitrogen by replacement of a hydrogen on said carbon or nitrogen.
  • heteroaromatic bicyclic ring system denotes a ring system consisting of two fused rings, in which at least one of the two rings is a heteroaromatic ring as defined above.
  • carbocyclic ring denotes a ring wherein the atoms forming the ring backbone are selected only from carbon. Unless otherwise indicated, a carbocyclic ring can be a saturated, partially unsaturated, or fully unsaturated ring. When a fully unsaturated carbocyclic ring satisfies Huckel's rule, then said ring is also called an “aromatic ring”. “Saturated carbocyclic ring” refers to a ring having a backbone consisting of carbon atoms linked to one another by single bonds; unless otherwise specified, the remaining carbon valences are occupied by hydrogen atoms.
  • lactam ring denotes lactams cyclic amides of varying ring sizes, such as ⁇ , ⁇ , ⁇ and ⁇ lactam compounds.
  • FIG. 1 Structure of compounds whose biological evaluation as anti-HIV agents was carried out.
  • FIG. 2 Compounds identified as potent anti-HIV agents.
  • FIGS. 3 A- 3 C Antiviral activity of compounds BSS-593, BSS-722A and BSS-730A which are selected members of the new class of compounds described in this document.
  • Dose-response curves were estimated from the percentage of inhibition of infection (y-axis) against log 10 of concentration of each compound (x-axis) using the sigmoidal dose-response equation (variable slope).
  • IC 50 and IC 90 values were determined from this curve. As stated above, IC 50 and IC 50 values correspond to the concentration of compound that inhibits viral replication by 50% and 90%, respectively.
  • FIG. 4 Acute toxicity assay of compound BSS-593.
  • ALT, AST and LDH were determined as markers of liver function and serum level of creatinine were determined as marker of renal function.
  • Serum levels of total cholesterol, low-density cholesterol (LDL), high-density cholesterol (HDL) and triglycerides were measured to evaluate the effect of the drugs on lipid homeostasis.
  • Results were expressed as the means with their standard errors and were compared using a one-factorial ANOVA test, followed by a Bonferroni's multi-comparison post hoc test. There was no statistical difference in the results obtained for the control rats (inoculated with sterile saline) and the rats inoculated with BSS-593, indicating that this compound does not induce liver and renal injury and does not alter lipid metabolism.
  • FIG. 5 Structure of compounds whose biological evaluation as anti- Plasmodium agents was carried out.
  • FIG. 6 Compound activity against P. berghei liver stages. Anti-Plasmodial activity (infection axis, bars) and toxicity to hepatoma cells (cell confluency axis, circles) are shown. Infection loads of Huh7 cells, a human hepatoma cell line, were determined by bioluminescence measurements of cell lysates 48 h after infection with luciferase-expressing P. berghei parasites. Luciferase assay in 96 well-plate; 10 000 Huh7 cells/well+10 000 PbA-LuciGFPcon spz/well.
  • FIG. 8 Inhibitory activity of BSS730A against multidrug resistant HIV isolates.
  • BSS-730A dose-response curves in TZM-bI cells are shown for several HIV-2 primary isolates that show resistance to multiple antiretroviral drugs (see Table 3).
  • 03PTHCC19 is a drug sensitive clinical isolate of HIV-2. Bars indicate the standard error from the mean.
  • a solution of spiro- ⁇ -lactam 10a in m-cresol was heated at 50° C. for 3 h (Method A).
  • spiro- ⁇ -lactam 10a afforded spiro-3H-pyrazole- ⁇ -lactam 11a in only 26% yield.
  • TFA 10 equiv
  • ⁇ -lactam 11a could be obtained in good yield (64%).
  • the spiro- ⁇ -lactams antimicrobial activity was determined as follows.
  • the spiro- ⁇ -lactams anti-HIV activity evaluation was determined as follows.
  • the biological evaluation as anti-HIV agents of the spiro- ⁇ -lactams presented in Table 1 resulted in the identification of three compounds with potent anti-HIV activity, namely BSS-593, BSS-722A and BSS-730A ( FIGS. 2 and 3 A- 3 C , Table 1). It is observed that compound BSS-593 was only active against HIV-1, however compounds BSS-722A and BSS-730A exhibited potent activity against HIV-1 and HIV-2. In fact, results show that BSS-730A leads to inhibition for both viral strains of about 100% (concentration of 15.2 ⁇ M).
  • TZM-bI previously designated JC53-bI (clone 13) is a HeLa cell line.
  • the parental cell line (JC.53) stably expresses large amounts of CD4, CCR5 and CXCR4.
  • the TZM-bI cell line was generated from JC.53 cells by introducing separate integrated copies of the luciferase and 8-galactosidase genes under control of the HIV-1 promoter.
  • the TZM-bI cell line is highly sensitive to infection with diverse isolates of HIV.
  • results presented in Table 2 show that these compounds did not possess in vitro cytotoxicity, however exhibited high in vitro therapeutic index.
  • cytotoxic concentration at 50% was determined for the following spiro- ⁇ -lactams (Table 2).
  • the spiro- ⁇ -lactams antibacterial activity of the spiro- ⁇ -lactams BSS-591, BSS-597, BSS-587, BSS-593 and BSS-730A was determined.
  • These spiro- ⁇ -lactams tests showed no inhibitory activity against different species of Gram + and Gram ⁇ bacteria, namely Escherichia coli ATCC 10536, Escherichia coli (Clinical strain), Staphylococcus aureus ATCC 6538, Bacillus subtillis ATCC 6633, Pseudomonas aeruginosa (Clinical strain), Enterococcus faecalis ATCC 29212, Lactobacillus rhamnosus and Lactobacillus plantarum at the concentration of 1 mg/ml.
  • the dose-responsive curve of compound BSS-730A was determined ( FIG. 7 ).
  • the acute toxicity assay of spiro- ⁇ -lactam BSS-593 was carried out.
  • Method A a solution of the corresponding spiro-3H-pyrazole- ⁇ -lactam 10 (0.52 mmol) in m-cresol (2.7 mL, 26 mmol) was stirred at 50° C. under nitrogen for 3 h. The mixture was cooled in an ice bath and then ethyl acetate (10 mL) was added. The organic layer was extracted with saturated aqueous NaHCO 3 (3 ⁇ 10 mL) and then with deionized water (10 mL). The combined aqueous layers were extracted with ethyl acetate. The aqueous layer was then cooled in an ice bath to 0-5° C. and acidified to pH 1 with 10% aqueous HCl. The mixture was stirred for 30 minutes. The mixture was then extracted with ethyl acetate (3 ⁇ 10 mL), and the combined organic layer was dried over Na 2 SO 4 and concentrated under reduced pressure.
  • Method B to a mixture of the corresponding spiro-3H-pyrazole- ⁇ -lactam 10 or spiro-2-pyrazoline- ⁇ -lactams 12/13 (0.38 mmol) and m-cresol (0.8 mL, 7.4 mmol) at 0° C. was added TFA (0.3 mL, 3.7 mmol). The reaction mixture was stirred at 0° C. under nitrogen for 16 h. The mixture was diluted with ethyl acetate (10 mL) and was extracted with saturated aqueous NaHCO 3 (3 ⁇ 10 mL). The organic layer was extracted with deionized water (10 mL).
  • the combined aqueous layers were extracted with ethyl acetate (3 ⁇ 10 mL).
  • the aqueous layer was then cooled in an ice bath to 0-5° C. and acidified to pH 1 with 10% aqueous HCl. The mixture was stirred for 30 minutes.
  • the mixture was then extracted with ethyl acetate (3 ⁇ 20 mL), and the combined organic layer was dried over Na 2 SO 4 and concentrated under reduced pressure.
  • the solid obtained was washed for 3 times with diethyl ether/petroleum ether and the acid was recovered by decantation.
  • Method C the corresponding spiro-3H-pyrazole- ⁇ -lactam 10 or spiro-2-pyrazoline- ⁇ -lactams 12/13 (0.26 mmol) was dissolved and stirred in anhydrous CH 2 Cl 2 (2 mL) at ⁇ 5° C. Anisole (0.2 mL, 1.82 mmol) and TFA (0.5 mL, 6.5 mmol) were added, and the reaction mixture stirred for 4 h. The mixture was diluted with cold diethyl ether (10 mL), and the solvent was evaporated. The residue was dissolved in THF (5 mL) and treated at 0° C. for 15 min with half saturated aqueous NaHCO 3 solution (15 mL).
  • Method A (2S,3′R,5R)-5′-(methoxycarbonyl)-3,3-dimethyl-7-oxo-4-thia-1-azaspiro[bicyclo[3.2.0]heptane-6,3′-pyrazole]-2-carboxylic acid (11a-BSS-593) was obtained from benzhydryl penicillanate 10a (253 mg, 0.53 mmol) as a yellow solid (45 mg, 0.14 mmol, 26%).
  • Method B (2S,3′R,5R)-5′-(methoxycarbonyl)-3,3-dimethyl-7-oxo-4-thia-1-azaspiro[bicyclo[3.2.0]heptane-6,3′-pyrazole]-2-carboxylic acid (11a-BSS-593) was obtained from benzhydryl penicillanate 10a (310 mg, 0.65 mmol) as a yellow solid (129 mg, 0.41 mmol, 64%).
  • Method C (2S,3′R,5R)-5′-(methoxycarbonyl)-3,3-dimethyl-7-oxo-4-thia-1-azaspiro[bicyclo[3.2.0]heptane-6,3′-pyrazole]-2-carboxylic acid (11a-BSS-593) was obtained from benzhydryl penicillanate 10a (122 mg, 0.26 mmol) as a yellow solid (79 mg, 0.25 mmol, 96%).
  • Method B (2S,3′R,5R)-4′,5′-bis(methoxycarbonyl)-3,3-dimethyl-7-oxo-4-thia-1-azaspiro[bicyclo[3.2.0]heptane-6,3′-pyrazole]-2-carboxylic acid (11b-BSS-587) was obtained from benzhydryl penicillanate 10b (205 mg, 0.38 mmol) as a yellow solid (49 mg, 0.13 mmol, 34%).
  • Method C (2S,3′R,5R)-4′,5′-bis(methoxycarbonyl)-3,3-dimethyl-7-oxo-4-thia-1-azaspiro[bicyclo[3.2.0]heptane-6,3′-pyrazole]-2-carboxylic acid (11b-BSS-587) was obtained from benzhydryl penicillanate 10b (167 mg, 0.31 mmol) as a yellow solid (111 mg, 0.30 mmol, 97%).
  • Method B Spiro[penicillanic-6,5′-(3-ethoxycarbonyl-2-pyrazoline)] acid (14a-BSS-597) was obtained from benzhydryl penicillanates 12a/13a (282 mg, 0.57 mmol) as a yellow solid (142 mg, 0.43 mmol, 76%).
  • Method B Spiro[penicillanic-6,5′-(3-acetyl-2-pyrazoline)] acid (14b-BSS-591) was obtained from benzhydryl penicillanates 12b/13b (266 mg, 0.57 mmol) as a brown solid (112 mg, 0.38 mmol, 67%).
  • synthesis of spiro-3H-pyrazole- ⁇ -lactams and spiro-3H-pyrazole- ⁇ -lactams was carried out in a similar way to the synthesis of spiro- ⁇ -lactams.
  • the spiro- ⁇ -lactams and spiro- ⁇ -lactams structures are:
  • the spiro- ⁇ -lactams and spiro- ⁇ -lactams structures are:
  • the spiro- ⁇ -lactams and spiro- ⁇ -lactams structures are:
  • the spiro- ⁇ -lactams and spiro- ⁇ -lactams structures are:
  • the spiro- ⁇ -lactams and spiro- ⁇ -lactams structures are:
  • the synthetic strategy described in Schemes 1 and 2 for the preparation of spiro-beta-lactams can be applied to the synthesis of the corresponding spiro- ⁇ -lactams and spiro- ⁇ -lactams by replacing the starting 6-diazopenicillanates 3 or 6-alkylidenepenicillanates 1 by the corresponding diazolactams or 6-alkylidenelactams.
  • the required compounds, derived from penicillamine, are prepared as outlined in the Scheme 5.
  • the anti-HIV activity of the compounds now disclosed was evaluated.
  • TZM-bI cells (AIDS Research and Reference Reagent Program, National Institutes of Health, USA) were cultured in complete growth medium that consists of Dulbecco's minimal essential medium (DMEM) supplemented with 10% fetal bovine serum (FBS), 100 U/ml of penicillin-streptomycin (Gibco/Invitrogen, USA), 1 mM of sodium pyruvate (Gibco/Invitrogen, USA), 2 mM of L-glutamine (Gibco/Invitrogen, USA) and 1 mM of non-essential amino acids (Gibco/Invitrogen, USA).
  • DMEM Dulbecco's minimal essential medium
  • FBS fetal bovine serum
  • FBS penicillin-streptomycin
  • 1 mM of sodium pyruvate Gibco/Invitrogen, USA
  • 2 mM of L-glutamine (Gibco/Invitrogen, USA)
  • peripheral blood mononuclear cells from healthy individuals (blood donors) were separated by Ficoll-Paque PLUS (GE Healthcare, Waukesha, Wis., USA) density gradient centrifugation and stimulated for 3 days with 5 ⁇ g/ml of phytohemagglutinin (PHA; Sigma-Aldrich, St. Louis, Mo., USA).
  • PHA phytohemagglutinin
  • PBMCs cultures were maintained in RPMI-1640 medium supplemented with 10% FBS, 100 U/ml of penicillin-streptomycin, 2 mM of L-glutamine (Gibco/Invitrogen, USA) 0.3 mg/ml of gentamicin (Gibco/Invitrogen, Carlsbad, Calif., USA), 5 g/ml of polybrene (Sigma-Aldrich, St. Louis, Mo., USA) and 20 U/ml units of recombinant interleukin-2 (Roche, Basel, Switzerland). All cell cultures were maintained at 37° C. in 5% CO 2 .
  • HIV reference strain SG3.1 was obtained by transfection of HEK293T cells with pSG3.1 (HIV-1) plasmid using Fugene 6 reagent (Roche, Switzerland) according to manufacturer's instructions.
  • the 50% tissue culture infectious dose (TCID 50 ) of the virus was determined in a single-round viral infectivity assay using a luciferase reporter gene assay in TZM-bI cells and calculated using the statistical method of Reed and Muench 27 .
  • the cellular viability assay was carried out as follows: the potential in vitro cytotoxicity of all BSS compounds was evaluated in TZM-bI cells.
  • TZM-bI cells (10000 cells/well in 96-well plates) were incubated in absence or presence of serial-two-fold dilutions of the compounds in growth medium (GM), with starting concentration of 100 ⁇ g/ml and a final concentration of 0.781 ⁇ g/ml. After 48 hours, cell viability was examined with alamarBlue reagent (Invitrogen, USA) according to manufacturer's instructions. Briefly, 10 ⁇ l of alamarBlue reagent was added to each well. After 4 hours at 37° C., the fluorescence was measured in Tecan Infinite M200 (excitation wavelength 550 nm and emission wavelength 600 nm).
  • At least two independent experiments have been performed for each cytotoxicity analysis. Each dilution of each compound has been performed in duplicate wells.
  • cytotoxicity controls a compound that kill cells—SDS.
  • the cytotoxicity of each test compound has been expressed by the 50% cytotoxic concentration (CC 50 ), which is the concentration of compound causing 50% death of the cells as measured by a 50% decrease of fluorescence in the compound-treated cells.
  • CC 50 50% cytotoxic concentration
  • the antiviral activity of the compounds was determined in a single-round assay with TZM-bI cells as previously described 26 .
  • Cells were infected with 200 TCID50 of virus in the presence of serial fold dilutions of the BSS compounds in GM, supplemented with DEAE-dextran (19.7 ⁇ g/ml).
  • luciferase expression was quantified with the One-Glow luciferase assay substrate reagent (Promega, USA) according to manufacturer's instructions. Briefly, a volume of reagent equal to that of the culture medium in each well was added. For 96-well plates, typically 100 ⁇ l of reagent is added to the cells grown in 100 ⁇ l of medium.
  • dose-response curves were estimated from the percentage of inhibition of infection (y-axis) against log 10 of concentration of each compound (x-axis) using the sigmoidal dose-response equation (variable slope) in GraphPad Prism version 5.00 for Windows (GraphPad Software, San Diego Calif. USA, www.graphpad.com).
  • IC 50 and IC 90 values were determined from this curve.
  • IC 50 and IC 50 values correspond to the concentration of compound that inhibits viral replication in 50% and 90%, respectively.
  • anti-bacterial activity of the compounds now disclosed was determined according to CLSI guidelines.
  • the following bacteria were used: reference strains E. coli ATCC 10536, Staphylococcus aureus ATCC 6538, Bacillus subtilis ATCC 6633 and Enterococcus faecalis ATCC 29212; clinical strains of E. coli and Pseudomonas aeruginosa isolated in our laboratory; and strains of Lactobacillus rhamnosus and Lactobacillus plantarum also isolated in our laboratory.
  • the Minimum Inhibitory Concentration (MIC) was determined by the agar diffusion method, in plates of Mueller-Hinton agar or Rogosa agar (for Lactobacilli).
  • an acute toxicity assay was carried out.
  • Liver injury was assessed by measuring the rise in the serum levels of alanine aminotransferase (ALT, a specific marker for hepatic parenchymal injury), aspartate aminotransferase (AST, a nonspecific marker for hepatic injury) and lactate dehydrogenase (LDH, a marker of nonspecific cellular injury). Serum levels of creatinine was determined as marker of renal injury. Serum levels of total cholesterol, low-density cholesterol (LDL), high-density cholesterol (HDL) and triglycerides were also measured to evaluate the effect of the drugs on lipid homeostasis. Results were expressed as the means with their standard errors and were compared using a one-factorial ANOVA test, followed by a Bonferroni's multi-comparison post hoc test. A P value ⁇ 0.05 was considered to be statistically significant.
  • ALT alanine aminotransferase
  • AST aspartate aminotransferase
  • LH lactate dehydrogenase
  • the in vitro activity against the liver stage of Plasmodium infection was also carried out: inhibition of liver stage Plasmodium infection by test compounds was determined by measuring the luminescence intensity in Huh-7 cells infected with a firefly luciferase-expressing P. berghei line, as previously described.
  • Huh-7 cells a human hepatoma cell line, were cultured in 1640 RPMI medium supplemented with 10% v/v fetal bovine serum, 1% v/v nonessential amino acids, 1% v/v penicillin/streptomycin, 1% v/v glutamine, and 10 mM 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (HEPES), pH 7, and maintained at 37° C. with 5% CO 2 .
  • Huh-7 cells 1.0 ⁇ 10 4 per well were seeded in 96-well plates the day before drug treatment and infection.
  • the medium was replaced by medium containing the appropriate concentration of each compound approximately 1 h prior to infection with sporozoites freshly obtained through disruption of salivary glands of infected female Anopheles stephensi mosquitoes. Sporozoite addition was followed by centrifugation at 1700 ⁇ g for 5 min. Parasite infection load was measured 48 h after infection by a bioluminescence assay (Biotium). The effect of the compounds on the viability of Huh-7 cells was assessed by the AlamarBlue assay (Invitrogen, U.K.) using the manufacturer's protocol.
  • the antimicrobial activity, anti-HIV activity, the cellular viability of spiro-3H-pyrazole- ⁇ -lactams and spiro-3H-pyrazole- ⁇ -lactams was carried out in a similar way to the synthesis of spiro- ⁇ -lactams.
  • the synergistic interaction between BSS-730A and AMD3100 studies on the activity of BSS-730A was carried out as follows.
  • CIs Combination indices
  • CI values were interpreted as follows: 0.9>CI>0.85: slight synergism, 0.85>CI>0.7: moderate synergism, 0.7>CI>0.3: synergism, 0.3>CI>0.1: strong synergism, CI ⁇ 0.1: very strong synergism), 0.9 ⁇ CI ⁇ 1.1 indicates an additive effect, and CI>1.1 indicates an antagonism effect.
  • the BSS-730A is active against multidrug resistant isolates.
  • the activity of the spiro- ⁇ -lactam with the higher anti-HIV activity (BSS-730A) was evaluated against eight drug resistant HIV-2 primary isolates and a control isolate that is sensitive to all antiretroviral drugs (isolate 03PTHCC19) (Table 3).
  • BSS-730A was highly active against all isolates with a median IC 50 fold-change of 2.39 and median IC 90 fold-change of 1.09 relative to the control isolate 03PTHCC19 (Table 3 and FIG. 8 ). These results suggest that BSS-730A could be used to treat infections caused by multidrug resistant isolates 17 .
  • BSS-730A displays a synergistic interaction with AMD3100.
  • the activity of BSS-730A was preliminarily assessed in a combination experiment with AMD3100, an entry inhibitor that binds to the CXCR4 co-receptor, in a single cycle assay in TZM-bI cells against HIV-1 SG3.1. Different ratios were tested: AMD3100+BSS-730A (1:1.4), AMD3100+BSS-730A (1:4.21) and AMD3100+BSS-730A (2.14:1).
  • Combination indices (CI) were calculated to determine whether synergistic, additive or antagonistic effects occurred after these combinations.
  • CI calculations showed synergism or strong synergism at 50, 75, and 90% inhibition of HIV-1 (CI: 0.27-0.39) for the first and second drug combinations where BSS-730A was in a higher concentration relatively to AMD3100 (Table 4).
  • the CI calculations showed an additive effect at 50 and 75% inhibition of HIV-1 (CI:0.93-0.97) and a slight synergism at 90% inhibition of HIV-1 (CI: 0.88).
  • the strongest synergistic interactions were observed with AMD3100+BSS-730A (1:1.4) and AMD3100+BSS-730A (1:4.21) combinations that presented CI wt of 0.21 and 0.18, respectively.
  • the strong synergy between BSS-730A and AMD3100 suggest that BSS-730A could be used in combination with entry inhibitors to treat or prevent HIV infection.
  • the combinations of BSS-730A with the entry inhibitor AMD3100 showed significant synergistic effect indicating this combination of drugs might be useful to treat and/or prevent infection caused by CXCR4-using HIV isolates which are usually found in late stage disease and are associated with disease progression 18 .
  • BSS-730A was highly active against HIV isolates that were resistant to several protease inhibitors (LPV, SQV, DRV), integrase inhibitors (RAL, DTG) and to all NRTIs. These results indicate that BSS-730A should be useful to treat or prevent infection by multidrug resistant HIV isolates.

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Abstract

The present disclosure relates to a new class of antimicrobial agents. In particular, this disclosure provides the identification and characterization of novel spiro-lactam compounds as anti-HIV/AIDS and anti-malarial agents. Furthermore, this disclosure also provides the preparation of spiro-β-penicillanic acids, which proved to be potent inhibitors of HIV.

Description

    CROSS-REFERENCE TO RELATED PATENT APPLICATIONS
  • This application is a Continuation of U.S. application Ser. No. 16/613,061 filed Nov. 12, 2019 which is a U.S. National Stage Application under 35 U.S.C. § 371 of International Patent Application No. PCT/IB2018/053357, filed May 14, 2018, which claims the benefit of priority to Portuguese Patent Application number PT 110070 filed May 12, 2017, all of which are hereby incorporated by reference as if set forth in their respective entireties herein.
  • TECHNICAL FIELD
  • The present disclosure relates to a new class of antimicrobial agents. In particular, this disclosure provides the identification and characterization of novel spiro-lactams compounds as anti-HIV/AIDS and anti-malarial agents. Furthermore, this disclosure also provides the preparation of spiro-β-penicillanic acids, which proved to be potent inhibitors of HIV.
  • The present disclosure relates to spiro-2-pyrazoline-β-lactam derivatives with the general formula I, spiro-3H-pyrazole-β-lactam derivatives with the general formula, II, spirocycloprpyl-β-lactam derivatives with the general formula III, spiro-1-pyrazoline-β-lactam derivatives with the general formula IV, spiro-2-pyrazoline-β-lactam derivatives with the general formulae V and VI, and spirocyclopentenyl-β-lactam derivatives with the general formulae VII and VIII, with remarkable anti-HIV and anti-Plasmodium properties.
  • Figure US20230285366A1-20230914-C00001
  • BACKGROUND
  • HIV-1 and HIV-2 are the causative agents of AIDS, a cureless mortal disease that affects almost 37 million individuals worldwide.1 HIV enters the cells after binding to the CD4 molecule and to the chemokine co-receptors CCR5 and/or CXCR4 that are expressed at the surface of many cell types (e.g. lymphocytes, macrophages, dendritic cells).2 Usually infection is established with a CCR5-tropic strain (R5 isolates), but as the disease progresses and the CD4+ T cells number declines, CXCR4-tropic isolates (X4) emerge in the majority of individuals.3
  • On average, untreated HIV-1 infection leads to AIDS and death after 10 years of infection. Antiretroviral therapy for HIV infection leads to suppression of viral replication, increasing the number of CD4+ T lymphocytes, thereby preventing AIDS-related complications and prolonging life.4 Antiretroviral agents in clinical use belong to 5 different classes: nucleos(t)ides reverse transcriptase inhibitors, non-nucleoside reverse transcriptase inhibitors, protease inhibitors, fusion inhibitor (Maraviroc-CCR5 antagonist; currently there is no CXCR4 antagonist in clinical use); fusion inhibitor (Enfuvirtide), and integrase inhibitors. Current drug regimens do not fully restore health5 and the rapid emergence of drug resistant strains6 indicates the need for new and better antiretroviral drugs.
  • Malaria is caused by protozoan parasites of the Plasmodium genus, five species of which, P. falciparum, P. ovale, P. vivax, P. malariae and P. knowlesi, are able to cause infection in humans. Malaria remains a formidable public health problem, which primarily affects the poorest regions of the world, killing nearly half a million people annually, with over 3 billion people at constant risk of infection7. It was estimated that in 2015 there were 214 million cases of malaria, resulting in 438,000 deaths, most of them in sub-Saharan Africa.
  • Mammalian infection by Plasmodium parasites occurs upon injection of sporozoites through the bite of infected female Anopheles mosquitoes. Injected sporozoites travel to their host's liver, where they invade and develop extensively inside hepatocytes. Hepatic infection culminates in the release of red blood cell (RBC)-infective merozoites into the blood stream, where they cyclically infect RBCs, giving rise to malaria symptoms and originating gametocytes that warrant the progress of infection onto the mosquito vector8. Current tools for malaria control are precarious and recent calls have been made for developing new or repurposing existing drugs as valuable interventions to help control infection9. The asymptomatic but obligatory nature of the hepatic stage of Plasmodium infection makes it a privileged target for anti-Plasmodial intervention, as drugs capable of inhibiting the parasite's liver stages (LS) could effectively impair infection before the onset of disease8, 10. Moreover, P. vivax and P. ovale can produce chronic liver forms termed hypnozoites, which can remain dormant for extended periods of time before initiating a blood stage infection and causing disease relapses. However, there is only one licensed drug, primaquine, for the elimination of the hepatic forms of the parasite. Unfortunately, primaquine has significant and potentially lethal side effects in patients with glucose-6-phosphate dehydrogenase enzyme deficiency, a genetic trait quite common in regions where malaria is endemic. On the other hand, primaquine cannot be given to pregnant women because of its toxic effects on the foetus. Due to all these limitations, it is urgent to identify new drugs capable of eliminating the parasite during the liver phase of its life cycle. Such drugs would have the potential to serve not only as effective prophylactics against malaria, but also to be used to achieve radical cure of infections by P. vivax and P. ovale 11.
  • There is considerable geographic overlap between Plasmodium and HIV. This is particularly the case in sub-Saharan Africa, due to the presence of factors that favor transmission of either pathogen, including poverty12. Thus, co-infection with Plasmodium and HIV is common in that region and contributes to the spread of both diseases13. HIV has been shown to increase the risk of development of severe P. falciparum malaria14, while malaria has been associated with a decline in CD4+ T cell number14d, enhanced HIV-1 replication15 and increased HIV transmission13a.
  • General Description
  • Lactam compounds are cyclic amides of varying ring sizes, such as α, β, γ and δ lactam compounds.
  • The β-lactam ring is the core structure of important pharmacologically active compounds, such as penicillins and cephalosporins. Spiro-β-lactams are also interesting target molecules since some derivatives exhibit relevant biological properties, namely, cholesterol absorption inhibition, antibacterial activity, β-lactamase inhibition and antimalarial activity. There are also known examples of spiro-β-lactam derivatives showing antiviral activity. The spirocyclic structural motif seems to be particularly interesting regarding the antiviral activity since other spiro-compounds, namely spirocyclic pyrrolidones and spiropiperidine derivatives, are inhibitors of HIV. On the other hand, some monocyclic β-lactams have proven to be inhibitors of HIV-1 protease.21 Therefore, the search for new spiro-β-lactams derivatives as potential inhibitors of HIV is a relevant research target.
  • An approach to new spiro-β-lactams derivatives is to explore the 1,3-dipolar cycloaddition reaction of 6-diazopenicillanates. In fact, it has been previously shown that spiro-2-pyrazolinepenicillanates can be obtained from the 1,3-dipolar cycloaddition reactions of 6-diazopenicillanates with acrylamide, acrylonitrile and acrylates. On the other hand, the addition of diphenyldiazomethane to 6-alkylidenepenicillanates leading to spiro-1-pyrazolinepenicillanates is an alternative approach to spiro-β-lactams.
  • In this context, the reactivity of 6-diazopenicillanates and 6-alkylidenepenicillanates was explored as an approach to new spiropenicillanates, which allowed the construction of the spirocyclic moiety keeping the penicillanate nucleous. An example of phosphane-catalyzed [3+2] annulation of allenoates to 6-alkylidenepenicillanates 1, which leads to chiral spirocyclopentenyl-β-lactams 2 is shown in Scheme 1.
  • Figure US20230285366A1-20230914-C00002
  • Chiral spiropyrazoline-β-lactams and spiro-3H-pyrazole-β-lactams were obtained stereoselectively via 1,3-dipolar cycloaddition reactions of 6-diazopenicillanates. Spiropyrazolinepenicillanates were also prepared via 1,3-dipolar cycloaddition reactions of 6-alkylidenepenicillanates 1 with diazo compounds. Finally, spiro-1-pyrazoline-f-lactams undergo microwave-induced denitrogenation allowing the stereoselective synthesis of spirocyclopropyl-β-lactams (Scheme 2).
  • Figure US20230285366A1-20230914-C00003
  • The present disclosure relates to a novel class of potent inhibitors of CCR5- and CXCR4-tropic HIV strains, based on spiro-β-lactam derivatives, spiro-γ-lactam derivatives and spiro-β-lactam derivatives.
  • In an embodiment, this new class of antiviral compounds based in particular on spiro-β-lactam derivatives may be useful for treating HIV infection either alone or in combination with antiretroviral drugs belonging to other classes, e.g. integrase inhibitors, reverse transcriptase inhibitors, protease inhibitors and fusion inhibitors.
  • In an embodiment, this new class of antiviral compounds based on spiro-β-lactam derivatives may be useful for preventing HIV infection, in particular in pre-exposure or post-exposure prophylaxis, either alone or in combination with antiretroviral drugs belonging to other classes, e.g. integrase inhibitors, reverse transcriptase inhibitors, protease inhibitors and fusion inhibitors.
  • In an embodiment, the spiro-β-lactam derivative named BSS-730A has potent anti-HIV activity, leading to inhibition of about 100% of the replication of both CCR5-tropic isolates and CXCR4-tropic isolates at a concentration of 15.2 μM.
  • In an embodiment, the spiro-β-lactam derivative named BSS-730A may be useful for treating HIV infection either alone or in combination with antiretroviral drugs belonging to other classes (e.g. integrase inhibitors, reverse transcriptase inhibitors, protease inhibitors and fusion inhibitors) in all types of pharmaceutical formulations (e.g. pills, syrup).
  • In an embodiment, the spiro-β-lactam derivative named BSS-730A may be useful for preventing HIV infection, in particular pre-exposure or post-exposure prophylaxis either alone or in combination with antiretroviral drugs belonging to other classes (e.g. integrase inhibitors, reverse transcriptase inhibitors, protease inhibitors and fusion inhibitors) in all types of pharmaceutical formulations (e.g. gels, rings, pills, syrup).
  • In an embodiment, the class of spiro-β-lactam derivatives now disclosed may combine anti-HIV and anti-Plasmodium activities.
  • In an embodiment, the class of spiro-β-lactam derivatives now disclosed may be useful for treating malaria.
  • In an embodiment, the class of spiro-β-lactam derivatives now disclosed may be useful for preventing malaria.
  • In an embodiment, the class of spiro-β-lactam derivatives now disclosed may be useful for treating patients co-infected with Plasmodium and HIV.
  • In an embodiment, the synthetic route spiro-2-pyrazoline-β-lactam derivatives with the general formula I, more particularly, (2S,3′R,5R)-3,3-dimethyl-7-oxo-2′,4′-dihydro-4-thia-1-azaspiro[bicyclo[3.2.0]heptane-6,3′-pyrazole]-2-carboxylic acids
  • Figure US20230285366A1-20230914-C00004
  • wherein R1 is an ester groups or R1 is an acetyl group.
  • In an embodiment, the synthetic route to spiro-3H-pyrazole-β-lactam derivatives with the general formula II, more particularly, (2S,3′R,5R)-3,3-dimethyl-7-oxo-4-thia-1-azaspiro[bicyclo[3.2.0]heptane-6,3′-pyrazole]-2-carboxylic acids.
  • Figure US20230285366A1-20230914-C00005
  • wherein:
      • R1 and R2 are ester substituents or
      • R1 is an ester substituent and R2 is a hydrogen.
  • The half maximal inhibitory concentration (IC50) is a measure of the effectiveness of a substance in inhibiting a specific biological or biochemical function. This quantitative measure indicates how much of a particular substance (inhibitor) is needed to inhibit a given biological process (or component of a process, i.e. an enzyme, cell, cell receptor or microorganism) by half. The values are typically expressed as molar concentration. It is commonly used as a measure of antagonist drug potency in pharmacological research. According to the FDA, IC50 represents the concentration of a drug that is required for 50% inhibition in vitro. It is comparable to an EC50 for agonist drugs. EC50 also represents the plasma concentration required for obtaining 50% of a maximum effect in vivo.
  • The 90% inhibitory concentration (IC90) is a measure of the effectiveness of a substance in inhibiting a specific biological or biochemical function. This quantitative measure indicates how much of a particular substance (inhibitor) is needed to inhibit a given biological process (or component of a process, i.e. an enzyme, cell, cell receptor or microorganism) by 90%. The values are typically expressed as molar concentration. It is commonly used as a measure of antagonist drug potency in pharmacological research. It is comparable to an ECW for agonist drugs. EC90 also represents the plasma concentration required for obtaining 90% of a maximum effect in vivo.
  • Cytotoxic concentration 50% (CC50) is defined as the concentration of the drug that causes death of 50% of viable cells.
  • In vitro therapeutic index is defined as the ratio between the CC50 and IC50 concentrations.
  • Maximum percentage of inhibition (MPI) is defined as the maximum percentage of inhibition of the replication of the virus.
  • The present disclosure relates to compound of formula I
  • Figure US20230285366A1-20230914-C00006
      • wherein
      • R1, R2 and R3 are independently selected from each other;
      • R1 is selected from H or CHPh2;
      • R2 is selected from a lactam ring;
      • R3 is a heterocyclic ring or carbocyclic ring,
      • for use in medicine or veterinary.
  • In an embodiment, the lactam ring may be a β-lactam ring, a γ-lactam ring or a δ-lactam ring.
  • In an embodiment, the heterocyclic ring or carbocyclic ring may be selected from a pyrazoline ring, a 3H-pyrazole ring, a cyclopropyl ring, a 1-pyrazoline ring, a 2-pyrazoline ring or a cyclopentenyl ring, in particular the heterocyclic ring or carbocyclic ring may comprise a phenyl group, an acetyl group, a benzoyl group or a carboxylate group.
  • In an embodiment, the compound may be selected from:
  • Figure US20230285366A1-20230914-C00007
    Figure US20230285366A1-20230914-C00008
  • In an embodiment, any of the compounds now disclosed may be for use in the treatment or therapy or prevention or suppression of infectious diseases, in particular wherein the infectious diseases are caused by disease-causing agents, in particular pathogenic agents, selected from a virus, a mycoplasm, or a protozoan, or mixtures thereof.
  • In an embodiment, the infectious disease may be acquired immunodeficiency syndrome (AIDS), malaria, leishmaniasis, hepatitis A, hepatitis B, hepatitis C, hepatitis D or hepatitis E, herpes simplex, human papillomavirus infection, severe acute respiratory syndrome.
  • In an embodiment, the infectious disease may be caused by an agent selected from: human immunodeficiency virus, human immunodeficiency virus-2 group A, human immunodeficiency virus-2 group B, human immunodeficiency virus-1 group M, human immunodeficiency virus-1 groups O, human immunodeficiency virus-1 group N, human immunodeficiency virus-1 group P, hepatitis A virus, hepatitis B virus, hepatitis C virus, hepatitis D virus, hepatitis E virus, herpes simplex virus 1, herpes simplex virus 2, human filovirus, togavirus, alphavirus, arenavirus, bunyavirus, flavivirus, human papillomavirus, human influenza A virus, Asian flu virus, herpes zoster leischmania or severe acute respiratory syndrome coronavirus.
  • In an embodiment, the protozoan may be selected from Plasmodium falciparum, Plasmodium ovale, Plasmodium vivox, Plasmodium malariae and/or Plasmodium knowlesi.
  • In an embodiment, any of the compounds now disclosed may be used in the simultaneous therapy or treatment of infectious diseases and wherein said infectious diseases are acquired immunodeficiency syndrome and malaria, in particular said compound may be at least one of the following list:
  • Figure US20230285366A1-20230914-C00009
  • In an embodiment, the infectious diseases are acquired immunodeficiency syndrome and malaria.
  • The present disclosure also relates to compound of formula I
  • Figure US20230285366A1-20230914-C00010
      • wherein
      • R1, R2 and R3 are independently selected from each other;
      • R1 is selected from H or CHPh2;
      • R2 is selected from a lactam ring;
      • R3 is a heterocyclic ring or carbocyclic ring
      • with the proviso that
  • Figure US20230285366A1-20230914-C00011
    Figure US20230285366A1-20230914-C00012
  • are excluded.
  • In an embodiment, the lactam ring may be a β-lactam ring, a γ-lactam ring or a δ-lactam ring.
  • In an embodiment, the heterocyclic ring or carbocyclic ring may be selected from a pyrazoline ring, a 3H-pyrazole ring, a cyclopropyl ring, a 1-pyrazoline ring, a 2-pyrazoline ring or a cyclopentenyl ring.
  • In an embodiment, the heterocyclic ring or carbocyclic ring may comprise a phenyl group, an acetyl group, a benzoyl group or a carboxylate group.
  • In an embodiment, and to obtain even better results, the compound may be
  • Figure US20230285366A1-20230914-C00013
  • In an embodiment, and to obtain even better results, the compound may be
  • Figure US20230285366A1-20230914-C00014
  • In an embodiment, and to obtain even better results, the compound may be
  • Figure US20230285366A1-20230914-C00015
  • In an embodiment, and to obtain even better results, the compound may be
  • Figure US20230285366A1-20230914-C00016
  • This disclosure also relates to a pharmaceutical composition comprising at least one of the compounds now disclosed in a therapeutically effective amount and as a first active ingredient, a pharmaceutically acceptable carrier or excipient, and a second active ingredient.
  • In an embodiment, the pharmaceutical composition may further comprise an anti-viral agent, an anti-malarial agent, an immunomodulator agent, an analgesic agent, an anti-inflammatory agent, an antibiotic agent or a diuretic agent.
  • In an embodiment, the antiviral agent is an anti-HIV agent.
  • In an embodiment, the pharmaceutical composition may further comprise a filler, a binder, a disintegrant and/or a lubricant, or mixtures thereof.
  • In an embodiment, the pharmaceutical composition may be suitable for administration once per day to an infected human or mammal.
  • In an embodiment, the pharmaceutical composition may be for use by oral administration or injectable administration.
  • In an embodiment, the pharmaceutical composition may further comprise a pharmaceutically acceptable carrier or excipient selected from pregelatinized starch, povidone, lactose monohydrate, microcrystalline cellulose, magnesium stearate, or combinations thereof.
  • In an embodiment, the pharmaceutical composition may comprise a second or a further active ingredient selected from a list comprising a HIV protease inhibitor (PI), a HIV nucleoside reverse transcriptase inhibitor (NRTI, or HIV nucleoside-analogue reverse transcriptase inhibitor NARTI), a HIV non-nucleoside reverse transcriptase inhibitor (NNRTI or HIV non-nucleoside analogue reverse transcriptase inhibitor), a HIV integrase inhibitor, or mixtures thereof.
  • In an embodiment, the pharmaceutical composition may comprise an anti-malarial agent selected from artemisin, 8-aminoquinoline, amodiaquine, arteether, artemether, artemsinin, artesunate, artesunic acid, artelinic acid, atovoquone, azithromycine, biguanide, chloroquine, chloroquine phosphate, chlorproguanil, cycloguanil, dapsone, desbutyl halofantrine, desipramine, doxycycline, dihydrofolate, reductase inhibitors, dipyridamole, halofantrine, haloperidol, hydroxychloroquine sulfate, imipramine, mefloquine, penfluridol, phospholipid inhibitors, primaquine, proguanil, pyrimethamine, pyronaridine, quinine, quinidine, quinacrineartemisinin, sulfonamides, sulfones, sulfadoxine, sulfalene, tafenoquine, tetracycline, tetrandine, triazine, or salts thereof.
  • In an embodiment, the pharmaceutical composition may comprise an anti-HIV agent selected from a list comprising tenofovir disoproxil fumarate, alafenamide, emtricitabine, atazanavir/sulfate, lopinavir/ritonavir, efavirenz, or combinations thereof.
  • Furthermore, this disclosure also relates to a kit comprising any of the compounds and/or a pharmaceutical composition as now disclosed.
  • The term “heterocyclic ring” denotes a ring wherein at least one of the atoms forming the ring backbone is other than carbon. Unless otherwise indicated, a heterocyclic ring can be a saturated, partially unsaturated, or fully unsaturated ring. “Saturated heterocyclic ring” refers to a heterocyclic ring containing only single bonds between ring members. “Partially saturated heterocyclic ring” refers a non-aromatic heterocyclic ring containing at least one double bond. The term “heteroaromatic ring” denotes a fully unsaturated aromatic ring in which at least one atom forming the ring backbone is not carbon. Typically, a heteroaromatic ring contains no more than 4 nitrogens, no more than 1 oxygen and no more than 1 sulfur. Unless otherwise indicated, heteroaromatic rings can be attached through any available carbon or nitrogen by replacement of a hydrogen on said carbon or nitrogen. The term “heteroaromatic bicyclic ring system” denotes a ring system consisting of two fused rings, in which at least one of the two rings is a heteroaromatic ring as defined above.
  • The term “carbocyclic ring” denotes a ring wherein the atoms forming the ring backbone are selected only from carbon. Unless otherwise indicated, a carbocyclic ring can be a saturated, partially unsaturated, or fully unsaturated ring. When a fully unsaturated carbocyclic ring satisfies Huckel's rule, then said ring is also called an “aromatic ring”. “Saturated carbocyclic ring” refers to a ring having a backbone consisting of carbon atoms linked to one another by single bonds; unless otherwise specified, the remaining carbon valences are occupied by hydrogen atoms.
  • The term “lactam ring” denotes lactams cyclic amides of varying ring sizes, such as α, β, γ and δ lactam compounds.
  • BRIEF DESCRIPTION OF THE DRAWINGS
  • The following figures provide preferred embodiments for illustrating the description and should not be seen as limiting the scope of the present disclosure.
  • FIG. 1 . Structure of compounds whose biological evaluation as anti-HIV agents was carried out.
  • FIG. 2 : Compounds identified as potent anti-HIV agents.
  • FIGS. 3A-3C: Antiviral activity of compounds BSS-593, BSS-722A and BSS-730A which are selected members of the new class of compounds described in this document. Dose-response curves for different HIV-1 and HIV-2 isolates with the BSS-593 (FIG. 3A), BSS-722A (FIG. 3B) and BSS-730A (FIG. 3C) compounds. Dose-response curves were estimated from the percentage of inhibition of infection (y-axis) against log10 of concentration of each compound (x-axis) using the sigmoidal dose-response equation (variable slope). IC50 and IC90 values were determined from this curve. As stated above, IC50 and IC50 values correspond to the concentration of compound that inhibits viral replication by 50% and 90%, respectively.
  • FIG. 4 : Acute toxicity assay of compound BSS-593. Wistar rats (n=5) were inoculated IP with different doses of BSS-593 and effects on liver, renal and lipid homeostasis were assessed by dosing different biochemical parameters 48 h after inoculation. ALT, AST and LDH were determined as markers of liver function and serum level of creatinine were determined as marker of renal function. Serum levels of total cholesterol, low-density cholesterol (LDL), high-density cholesterol (HDL) and triglycerides were measured to evaluate the effect of the drugs on lipid homeostasis. Results were expressed as the means with their standard errors and were compared using a one-factorial ANOVA test, followed by a Bonferroni's multi-comparison post hoc test. There was no statistical difference in the results obtained for the control rats (inoculated with sterile saline) and the rats inoculated with BSS-593, indicating that this compound does not induce liver and renal injury and does not alter lipid metabolism.
  • FIG. 5 : Structure of compounds whose biological evaluation as anti-Plasmodium agents was carried out.
  • FIG. 6 : Compound activity against P. berghei liver stages. Anti-Plasmodial activity (infection axis, bars) and toxicity to hepatoma cells (cell confluency axis, circles) are shown. Infection loads of Huh7 cells, a human hepatoma cell line, were determined by bioluminescence measurements of cell lysates 48 h after infection with luciferase-expressing P. berghei parasites. Luciferase assay in 96 well-plate; 10 000 Huh7 cells/well+10 000 PbA-LuciGFPcon spz/well.
  • FIG. 7 : Representative dose-response curve of compound BSS-730A, in vitro liver stage activity, with a IC50=0.55±0.14 μM. Luciferase assay in 96 well-plate 10 000 Huh7 cells/well+10 000 PbA-LuciGFPcon spz/well.
  • FIG. 8 : Inhibitory activity of BSS730A against multidrug resistant HIV isolates. BSS-730A dose-response curves in TZM-bI cells are shown for several HIV-2 primary isolates that show resistance to multiple antiretroviral drugs (see Table 3). 03PTHCC19 is a drug sensitive clinical isolate of HIV-2. Bars indicate the standard error from the mean.
  • DETAILED DESCRIPTION
  • In an embodiment, the synthesis of spiro-3H-pyrazole-β-lactams was carried out as follows.
  • In an embodiment, studies on the deprotection of carboxylic ester of spiro-β-lactams 10 and 12/13 to afford the corresponding penicillanic acid derivatives were carried out. The benzhydryl ester derivatives were selected for the synthesis of the free acids, since it is known that the removal of this protective group is usually easier than from benzyl esters. Deprotection of benzhydryl esters of penicillanates can be achieved by treatment with anisole or with phenol in the presence of trifluoroacetic acid (TFA). In most cases, a large excess of acid is required to complete the reaction. However, the synthesis of penicillanic acids from the corresponding benzhydryl esters under free acid conditions by gentle heating in the presence of m-cresol has been reported, said reaction conditions being particularly useful for the cleavage of esters of compounds unstable under acidic conditions.
  • In this context, in an embodiment, a solution of spiro-β-lactam 10a in m-cresol was heated at 50° C. for 3 h (Method A). However, under these reactions conditions spiro-β-lactam 10a afforded spiro-3H-pyrazole-β-lactam 11a in only 26% yield. It was observed, that by carrying out the reaction with m-cresol in the presence of TFA (10 equiv) at 0° C. for 16 h (Method B), β-lactam 11a could be obtained in good yield (64%). These reactions conditions when applied to benzhydryl ester 10b furnished spiro-f-lactam 11b in 34% yield. It was concluded that deprotection of spiro-β-lactams 10 requires TFA catalysis. Finally, the deprotection of the benzhydryl esters 10a and 10b with anisole and TFA (25 equiv) at −5° C. for 4 h (Method C) proved to be the more efficient methodology, affording the free acids 10a (96%) and 10b (97%) in high yield (Scheme 3).
  • Figure US20230285366A1-20230914-C00017
  • Surprisingly, attempts to convert the benzhydryl esters 12 and 13 into the free acids using Method C were unsuccessful, resulting only in decomposing products. On the other hand, it was observed that the reaction of these spiro-β-lactams with m-cresol in the presence of TFA at 0° C. for 16 h (Method B), resulted in the target free acids 14a and 14b, respectively, in good yield (67-76%) (Scheme 4). These results indicate that spiro-β-lactams 14 are more acid-labile than spiro-β-lactams 11. Thus, the optimized reaction conditions for deprotection of benzhydryl esters of penicillanates are strongly dependent on the type of β-lactam derivative.
  • It is worth emphasizing that the deprotection of spiro-β-lactams 12/13 was carried starting from a mixture of isomers, but after work-up spiro-β-lactams 14 were isolated as single products.
  • Figure US20230285366A1-20230914-C00018
  • In an embodiment, the spiro-β-lactams antimicrobial activity was determined as follows.
  • In an embodiment, having access to a range of new spiro-β-lactams, the biological evaluation of 17 compounds as anti-HIV and anti-malarial agents was carried out (FIG. 1 ).
  • In an embodiment, the spiro-β-lactams anti-HIV activity evaluation was determined as follows.
  • In an embodiment, the biological evaluation as anti-HIV agents of the spiro-β-lactams presented in Table 1, resulted in the identification of three compounds with potent anti-HIV activity, namely BSS-593, BSS-722A and BSS-730A (FIGS. 2 and 3A-3C, Table 1). It is observed that compound BSS-593 was only active against HIV-1, however compounds BSS-722A and BSS-730A exhibited potent activity against HIV-1 and HIV-2. In fact, results show that BSS-730A leads to inhibition for both viral strains of about 100% (concentration of 15.2 μM).
  • TABLE 1
    IC50, IC90, CC50 and TI of compounds BSS-593, BSS-722A and BSS-730A.
    Compound Virus IC50 (μM) IC90 (μM) CC50 (μM) TI MPI (%)
    BSS-593 01PTHDECJN 0.035 na 158.00 4553.31 58
    SG3.1 0.012 na 13144.76 84
    03PTHCC19 wa wa Na wa
    BSS-722A 93AOHDC249 0.332 0.7008 53.70 161.80 99
    SG3.1 0.650 1.0909 82.64 97
    03PTHCC19 0.510 1.1819 105.29 90
    BSS-730A 93AOHDC249 0.026 0.1180 76.84 2946.32 99
    93AOHDC250 0.004 0.0197 20247.69 94
    SG3.1 0.014 0.0252 5584.30 99
    03PTHCC19 0.005 0.1454 14029.58 99
    na—not applicable;
    wa—without antiviral activity;
    IC50inhibitory concentration 50%;
    IC90—inhibitory concentration 90%;
    CC50cytotoxic concentration 50%;
    TI—in vitro therapeutic index (TI = CC50/IC50);
    MPI—maximum percentage of inhibition;
    01PTHDECJN, 93AOHDC249 and 93AOHDC249—CCR5 tropic HIV-1 primary isolates (uses the CCR5 co-receptor to enter cells);
    SG3.1—CXCR4 tropic HIV-1adapted isolate (uses the CXCR4 co-receptor to enter cells);
    03PTHCC19—CCR5 tropic HIV-2 isolate.
  • In an embodiment, the cellular cytotoxicity of 17 spiro-β-lactams was investigated in TZM-bI cells using the AlamarBlue assay as recommended by the manufacturer (Invitrogen, USA). TZM-bI, previously designated JC53-bI (clone 13) is a HeLa cell line. The parental cell line (JC.53) stably expresses large amounts of CD4, CCR5 and CXCR4. The TZM-bI cell line was generated from JC.53 cells by introducing separate integrated copies of the luciferase and 8-galactosidase genes under control of the HIV-1 promoter. The TZM-bI cell line is highly sensitive to infection with diverse isolates of HIV.
  • In an embodiment, the results presented in Table 2 show that these compounds did not possess in vitro cytotoxicity, however exhibited high in vitro therapeutic index.
  • In an embodiment the cytotoxic concentration at 50% (CC50) was determined for the following spiro-β-lactams (Table 2).
  • TABLE 2
    Cytotoxicity of spiro-β-lactams
    Compound CC50 (μM) Compound CC50 (μM)
    BSS-591 163.76 BSS-796 98.91
    BSS-597 151.79 BSS-973C 79.80
    BSS-587 135.83 BSS-974C 80.79
    BSS-1026 82.01 BSS-730A 76.84
    BSS-593 158.14 BSS-730B 74.45
    BSS-452 104.73 BSS-793B 47.69
    BSS-708 83.80 BSS-794B 49.02
    BSS-971S 81.98 BSS-722A 53.74
    BSS-974S 91.93
  • In an embodiment, the spiro-β-lactams antibacterial activity of the spiro-β-lactams BSS-591, BSS-597, BSS-587, BSS-593 and BSS-730A was determined. These spiro-β-lactams tests showed no inhibitory activity against different species of Gram+ and Gram bacteria, namely Escherichia coli ATCC 10536, Escherichia coli (Clinical strain), Staphylococcus aureus ATCC 6538, Bacillus subtillis ATCC 6633, Pseudomonas aeruginosa (Clinical strain), Enterococcus faecalis ATCC 29212, Lactobacillus rhamnosus and Lactobacillus plantarum at the concentration of 1 mg/ml.
  • In an embodiment, the dose-responsive curve of compound BSS-730A was determined (FIG. 7 ).
  • In an embodiment, the acute toxicity assay of spiro-β-lactam BSS-593 was carried out. A study was conducted in Wistar rats (220-250 g) to evaluate the effects of single administration of compound BSS-593 on organ function and survival over a period of 48 h. Animals received the test drug intraperitoneally (lower dose 0.1 mg/kg; n=5 animals; intermediate dose I mg/kg; n=5; higher dose 10 mg/kg; n=5) and were monitored regularly for visible stress or toxicity signs. Control animals were administered with sterile saline (1 mL/kg; n=4). No animal died during the test period of 48 h (animal survival rate 100%). No abnormal behavior or signs of abnormal toxicity were noticed. There were no significant differences between the biochemical markers of injury used to characterize liver function, kidney function and general cell injury analyzed parameters (as determined by the levels of ALT, AST, creatinine and LDH in the blood) in animals administered with compound BSS-593 and control animals (FIG. 4 ). Similarly, there were no changes in the blood lipid profiles as determined by the levels of cholesterol, LDL, HDL and TG in the blood. After blood collection animals were necropsied to identify macroscopic signs of organ injury. No significant differences were identified between animals.
  • In an embodiment, the anti-Plasmodium activity of the three spiro-β-lactams compounds with higher anti-HIV (BSS-593, BSS-730A and BSS-722A) and of the two non-active derivatives (BSS-452 and BSS-1026) was also evaluated (FIGS. 2 and 5 ). Results show that the two compounds with no anti-HIV activity also did not display anti-Plasmodium activity, whereas the ones active against HIV also presented activity against Plasmodium berghei liver stages. Spiro-β-lactam BSS-730A was identified as the compound with the highest anti-Plasmodium activity (IC50=0.55±0.14 μM). These results demonstrate a very interesting mimetic activity for HIV and Plasmodium, possibly suggesting a similar mechanism of action. It is conceivable that the compounds may act as inhibitors of pathogen invasion, interfering with the entry of the virus/parasite into the cell, by acting on specific cell receptors.
  • In an embodiment, the general procedure for the synthesis of spiro-3H-pyrazole-β-lactams 10 and 12 was carried out in the following way:
  • In an embodiment, Method A, a solution of the corresponding spiro-3H-pyrazole-β-lactam 10 (0.52 mmol) in m-cresol (2.7 mL, 26 mmol) was stirred at 50° C. under nitrogen for 3 h. The mixture was cooled in an ice bath and then ethyl acetate (10 mL) was added. The organic layer was extracted with saturated aqueous NaHCO3 (3×10 mL) and then with deionized water (10 mL). The combined aqueous layers were extracted with ethyl acetate. The aqueous layer was then cooled in an ice bath to 0-5° C. and acidified to pH 1 with 10% aqueous HCl. The mixture was stirred for 30 minutes. The mixture was then extracted with ethyl acetate (3×10 mL), and the combined organic layer was dried over Na2SO4 and concentrated under reduced pressure.
  • In an embodiment, Method B, to a mixture of the corresponding spiro-3H-pyrazole-β-lactam 10 or spiro-2-pyrazoline-β-lactams 12/13 (0.38 mmol) and m-cresol (0.8 mL, 7.4 mmol) at 0° C. was added TFA (0.3 mL, 3.7 mmol). The reaction mixture was stirred at 0° C. under nitrogen for 16 h. The mixture was diluted with ethyl acetate (10 mL) and was extracted with saturated aqueous NaHCO3 (3×10 mL). The organic layer was extracted with deionized water (10 mL). The combined aqueous layers were extracted with ethyl acetate (3×10 mL). The aqueous layer was then cooled in an ice bath to 0-5° C. and acidified to pH 1 with 10% aqueous HCl. The mixture was stirred for 30 minutes. The mixture was then extracted with ethyl acetate (3×20 mL), and the combined organic layer was dried over Na2SO4 and concentrated under reduced pressure. The solid obtained was washed for 3 times with diethyl ether/petroleum ether and the acid was recovered by decantation.
  • In an embodiment, Method C, the corresponding spiro-3H-pyrazole-β-lactam 10 or spiro-2-pyrazoline-β-lactams 12/13 (0.26 mmol) was dissolved and stirred in anhydrous CH2Cl2 (2 mL) at −5° C. Anisole (0.2 mL, 1.82 mmol) and TFA (0.5 mL, 6.5 mmol) were added, and the reaction mixture stirred for 4 h. The mixture was diluted with cold diethyl ether (10 mL), and the solvent was evaporated. The residue was dissolved in THF (5 mL) and treated at 0° C. for 15 min with half saturated aqueous NaHCO3 solution (15 mL). After addition of deionized water (5 mL) and ethyl acetate (20 mL), the two layers were separated and the aqueous layer extracted with ethyl acetate (2×20 mL). The aqueous layer was acidified to pH 3 in an ice bath with HCl (1 N) and extracted with ethyl acetate (3×20 mL). The combined organic layer was dried over Na2SO4 and concentrated under reduced pressure to give the desired acid.
  • In an embodiment, Method A, (2S,3′R,5R)-5′-(methoxycarbonyl)-3,3-dimethyl-7-oxo-4-thia-1-azaspiro[bicyclo[3.2.0]heptane-6,3′-pyrazole]-2-carboxylic acid (11a-BSS-593) was obtained from benzhydryl penicillanate 10a (253 mg, 0.53 mmol) as a yellow solid (45 mg, 0.14 mmol, 26%).
  • In an embodiment, Method B, (2S,3′R,5R)-5′-(methoxycarbonyl)-3,3-dimethyl-7-oxo-4-thia-1-azaspiro[bicyclo[3.2.0]heptane-6,3′-pyrazole]-2-carboxylic acid (11a-BSS-593) was obtained from benzhydryl penicillanate 10a (310 mg, 0.65 mmol) as a yellow solid (129 mg, 0.41 mmol, 64%).
  • In an embodiment, Method C: (2S,3′R,5R)-5′-(methoxycarbonyl)-3,3-dimethyl-7-oxo-4-thia-1-azaspiro[bicyclo[3.2.0]heptane-6,3′-pyrazole]-2-carboxylic acid (11a-BSS-593) was obtained from benzhydryl penicillanate 10a (122 mg, 0.26 mmol) as a yellow solid (79 mg, 0.25 mmol, 96%).
  • In an embodiment, the data for compound 11a (BSS-593) is as follows: mp 90-91° C. vmax/cm−1 (film) 3469, 1783 (β-lactam), 1732 (ester), 1567; 1H NMR (400 MHz, CDCl3) δH 1.64 (s, 3H), 1.67 (s, 3H), 3.97 (s, 3H), 4.69 (s, 1H), 4.85 (br s, 1H), 6.33 (s, 1H), 6.87 (s, 1H); 13C NMR (100 MHz, CDCl3) Sc 26.2, 31.2, 52.7, 60.3, 61.8, 69.0, 104.4, 145.4, 149.6, 151.5, 161.8, 170.7; HRMS (ESI) m/z 312.06378 (C12H14N3O5S [MH+], 312.06487). [α]20 D=+235 (c=1, CH3OH).
  • In an embodiment, Method B, (2S,3′R,5R)-4′,5′-bis(methoxycarbonyl)-3,3-dimethyl-7-oxo-4-thia-1-azaspiro[bicyclo[3.2.0]heptane-6,3′-pyrazole]-2-carboxylic acid (11b-BSS-587) was obtained from benzhydryl penicillanate 10b (205 mg, 0.38 mmol) as a yellow solid (49 mg, 0.13 mmol, 34%).
  • In an embodiment, Method C, (2S,3′R,5R)-4′,5′-bis(methoxycarbonyl)-3,3-dimethyl-7-oxo-4-thia-1-azaspiro[bicyclo[3.2.0]heptane-6,3′-pyrazole]-2-carboxylic acid (11b-BSS-587) was obtained from benzhydryl penicillanate 10b (167 mg, 0.31 mmol) as a yellow solid (111 mg, 0.30 mmol, 97%).
  • In an embodiment, the data for compound 11b (BSS-587) is as follows: mp 89-91° C. vmax/cm−1 (film) 3477, 1793 (0-lactam), 1744 (ester), 1589; 1H NMR (400 MHz, CDCl3) δH 1.61 (s, 3H), 1.68 (s, 3H), 3.89 (s, 3H), 4.00 (s, 3H), 4.75 (s, 1H), 6.02 (br s, 1H), 6.48 (s, 1H); 13C NMR (100 MHz, CDCl3) δC 26.2, 32.1, 52.5, 53.2, 60.9, 61.4, 69.0, 110.5, 148.9, 150.0, 150.5, 160.1, 170.0, 171.0; HRMS (ESI) m/z 370.07154 (C14H16N3O7S [MH+], 370.07035). [α]20 D=+241 (c=1.7, CH3OH).
  • In an embodiment, Method B, Spiro[penicillanic-6,5′-(3-ethoxycarbonyl-2-pyrazoline)] acid (14a-BSS-597) was obtained from benzhydryl penicillanates 12a/13a (282 mg, 0.57 mmol) as a yellow solid (142 mg, 0.43 mmol, 76%).
  • In an embodiment, the data for compound 14a (BSS-597) is as follows: mp 114-115° C. vmax/cm−1 (film) 3334, 1774, 1731, 1716; 1H NMR (400 MHz, CDCl3) δH 1.34 (t, J=7.0 Hz, 3H), 1.54 (s, 3H), 1.56 (s, 3H), 3.30 (d, J=18.8 Hz, 1H), 3.64 (d, J=18.8 Hz, 1H), 4.29-4.34 (m, 2H), 4.47 (s, 1H), 5.36 (s, 1H); 13C NMR (100 MHz, CDCl3) δC 14.2, 26.0, 33.1, 37.0, 61.6, 63.6, 68.6, 77.2, 82.3, 140.0, 161.8, 170.5, 173.0; HRMS (ESI) m/z 328.09679 (C13H18N3O5S [MH+], 328.09617). [α]20 D=+140 (c=0.5, CH3OH).
  • In an embodiment, Method B, Spiro[penicillanic-6,5′-(3-acetyl-2-pyrazoline)] acid (14b-BSS-591) was obtained from benzhydryl penicillanates 12b/13b (266 mg, 0.57 mmol) as a brown solid (112 mg, 0.38 mmol, 67%).
  • In an embodiment, the data for compound 14b (BSS-591) is as follows: mp 152-153° C. vmax/cm−1 (film) 3338, 1766, 1736; 1H NMR (400 MHz, CDCl3) δH 1.54 (s, 3H), 1.57 (s, 3H), 2.41 (s, 3H), 3.23 (d, J=18.4 Hz, 1H), 3.61 (d, J=18.4 Hz, 1H), 4.48 (s, 1H), 5.33 (s, 1H); 13C NMR (100 MHz, CDCl3) δC 25.6, 25.9, 33.2, 35.7, 63.6, 65.9, 68.5, 82.5, 148.2, 170.5, 173.0, 193.8; HRMS (ESI) m/z 298.08627 (C12H16N3O4S [MH+], 298.08560). [α]20 D=+145 (c=1, CH3OH).
  • In an embodiment, the synthesis of spiro-3H-pyrazole-γ-lactams and spiro-3H-pyrazole-δ-lactams was carried out in a similar way to the synthesis of spiro-β-lactams.
  • In an embodiment, the spiro-γ-lactams and spiro-δ-lactams structures are:
  • Figure US20230285366A1-20230914-C00019
      • wherein:
      • R1 is an ester group or an acetyl group.
  • In an embodiment, the spiro-γ-lactams and spiro-δ-lactams structures are:
  • Figure US20230285366A1-20230914-C00020
      • wherein:
      • R1 and R2 are independently selected from each other;
      • R1 and R2 are ester substituents, or R1 is an ester substituent and R2 is a hydrogen.
  • In an embodiment, the spiro-γ-lactams and spiro-δ-lactams structures are:
  • Figure US20230285366A1-20230914-C00021
      • wherein:
      • R1, R2, R3 and R4 are independently selected from each other;
      • R1 is selected from an acetyl substituent, a benzoyl substituent, R2 is a hydrogen; R3 is an aryl substituent, R4 is a hydrogen; or R2/R3 is a succinimide-ring fused system.
  • In an embodiment, the spiro-γ-lactams and spiro-δ-lactams structures are:
  • Figure US20230285366A1-20230914-C00022
      • wherein:
      • R1 is an alkyl substituent or an aryl substituent.
  • In an embodiment, the spiro-γ-lactams and spiro-δ-lactams structures are:
  • Figure US20230285366A1-20230914-C00023
      • wherein R1, R2 and R3 are independently selected from each other;
      • R1 is selected from an ester group or an acetyl group;
      • R2 is selected from a hydrogen or an ester substituent;
      • R3 is an aryl substituent,
      • R4 is a hydrogen; or R2/R3 is a succinimide-ring fused system.
  • In an embodiment, the synthetic strategy described in Schemes 1 and 2 for the preparation of spiro-beta-lactams can be applied to the synthesis of the corresponding spiro-γ-lactams and spiro-δ-lactams by replacing the starting 6-diazopenicillanates 3 or 6-alkylidenepenicillanates 1 by the corresponding diazolactams or 6-alkylidenelactams. The required compounds, derived from penicillamine, are prepared as outlined in the Scheme 5.
  • Figure US20230285366A1-20230914-C00024
  • In an embodiment the anti-HIV activity of the compounds now disclosed was evaluated.
  • In an embodiment, TZM-bI cells (AIDS Research and Reference Reagent Program, National Institutes of Health, USA) were cultured in complete growth medium that consists of Dulbecco's minimal essential medium (DMEM) supplemented with 10% fetal bovine serum (FBS), 100 U/ml of penicillin-streptomycin (Gibco/Invitrogen, USA), 1 mM of sodium pyruvate (Gibco/Invitrogen, USA), 2 mM of L-glutamine (Gibco/Invitrogen, USA) and 1 mM of non-essential amino acids (Gibco/Invitrogen, USA).
  • In an embodiment, peripheral blood mononuclear cells (PBMCs) from healthy individuals (blood donors) were separated by Ficoll-Paque PLUS (GE Healthcare, Waukesha, Wis., USA) density gradient centrifugation and stimulated for 3 days with 5 μg/ml of phytohemagglutinin (PHA; Sigma-Aldrich, St. Louis, Mo., USA). PBMCs cultures were maintained in RPMI-1640 medium supplemented with 10% FBS, 100 U/ml of penicillin-streptomycin, 2 mM of L-glutamine (Gibco/Invitrogen, USA) 0.3 mg/ml of gentamicin (Gibco/Invitrogen, Carlsbad, Calif., USA), 5 g/ml of polybrene (Sigma-Aldrich, St. Louis, Mo., USA) and 20 U/ml units of recombinant interleukin-2 (Roche, Basel, Switzerland). All cell cultures were maintained at 37° C. in 5% CO2.
  • In an embodiment, the primary isolates 93AOHDC249, 93AOHDC250, 01PTHDECJN and 03PTHCC19, used in this study were previously isolated, titrated and characterized for co-receptor usage. HIV reference strain SG3.1 was obtained by transfection of HEK293T cells with pSG3.1 (HIV-1) plasmid using Fugene 6 reagent (Roche, Switzerland) according to manufacturer's instructions.
  • In an embodiment, the 50% tissue culture infectious dose (TCID50) of the virus was determined in a single-round viral infectivity assay using a luciferase reporter gene assay in TZM-bI cells and calculated using the statistical method of Reed and Muench27.
  • In an embodiment, the cellular viability assay was carried out as follows: the potential in vitro cytotoxicity of all BSS compounds was evaluated in TZM-bI cells. TZM-bI cells (10000 cells/well in 96-well plates) were incubated in absence or presence of serial-two-fold dilutions of the compounds in growth medium (GM), with starting concentration of 100 μg/ml and a final concentration of 0.781 μg/ml. After 48 hours, cell viability was examined with alamarBlue reagent (Invitrogen, USA) according to manufacturer's instructions. Briefly, 10 μl of alamarBlue reagent was added to each well. After 4 hours at 37° C., the fluorescence was measured in Tecan Infinite M200 (excitation wavelength 550 nm and emission wavelength 600 nm).
  • In an embodiment, at least two independent experiments have been performed for each cytotoxicity analysis. Each dilution of each compound has been performed in duplicate wells.
  • In an embodiment, for each assay there were medium controls (only growth medium), cell controls (cells without test compound) and cytotoxicity controls (a compound that kill cells—SDS).
  • In an embodiment, the cytotoxicity of each test compound has been expressed by the 50% cytotoxic concentration (CC50), which is the concentration of compound causing 50% death of the cells as measured by a 50% decrease of fluorescence in the compound-treated cells.
  • In an embodiment, the antiviral activity of the compounds was determined in a single-round assay with TZM-bI cells as previously described26. Cells were infected with 200 TCID50 of virus in the presence of serial fold dilutions of the BSS compounds in GM, supplemented with DEAE-dextran (19.7 μg/ml). After 48 h of infection, luciferase expression was quantified with the One-Glow luciferase assay substrate reagent (Promega, USA) according to manufacturer's instructions. Briefly, a volume of reagent equal to that of the culture medium in each well was added. For 96-well plates, typically 100 μl of reagent is added to the cells grown in 100 μl of medium. After an incubation of 3 minutes at room temperature to allow complete cell lysis luminescence was measured in Tecan Infinite M200. Background luminescence was measured by using control wells that contained only target cells and GM. Maraviroc (CCR5 antagonist), T1249 (fusion inhibitor) and AMD3100 (CXCR4 antagonist) were used as positive controls of the antiviral activity. At least two independent experiments were performed for each analysis and each assay was set up in triplicate wells.
  • In an embodiment, dose-response curves were estimated from the percentage of inhibition of infection (y-axis) against log10 of concentration of each compound (x-axis) using the sigmoidal dose-response equation (variable slope) in GraphPad Prism version 5.00 for Windows (GraphPad Software, San Diego Calif. USA, www.graphpad.com). IC50 and IC90 values were determined from this curve. IC50 and IC50 values correspond to the concentration of compound that inhibits viral replication in 50% and 90%, respectively.
  • In an embodiment, anti-bacterial activity of the compounds now disclosed was determined according to CLSI guidelines. The following bacteria were used: reference strains E. coli ATCC 10536, Staphylococcus aureus ATCC 6538, Bacillus subtilis ATCC 6633 and Enterococcus faecalis ATCC 29212; clinical strains of E. coli and Pseudomonas aeruginosa isolated in our laboratory; and strains of Lactobacillus rhamnosus and Lactobacillus plantarum also isolated in our laboratory. The Minimum Inhibitory Concentration (MIC) was determined by the agar diffusion method, in plates of Mueller-Hinton agar or Rogosa agar (for Lactobacilli). Briefly, 108 cfu/ml bacterial suspensions were prepared in sterile water and spread in the culture media. Sterile disks containing different concentrations of P3 were placed on the inoculated surface. Plates were incubated at 37° C. for 24 h or 48 h. Lactobacilli were incubated at microaerophilic conditions. A negative control made of sterile water was used. Disks of amoxicillin and imipenem were used as positive controls. The maximum concentration tested for each compound was 1 mg/ml.
  • In an embodiment, an acute toxicity assay was carried out. Female Wistar (220-250 g) rats were randomly divided in 4 groups. Treated animals received 3 different doses of the BSS-593, comprising a lower dose (0.1 mg/kg; n=5), an intermediate dose (1 mg/kg; n=5), and a higher dose (10 mg/kg; n=5). A fourth group of control animals was administered with sterile saline (B. Braun, Portugal) (1 mL/kg; n=4). Animals received the test drug via the intraperitoneal route and were monitored regularly for visible stress or toxicity signs such as death. All rats were anesthetized with sodium pentobarbital (Eutasil, 60 mg/kg i.p; Sanofi Veterindria, Algés, Portugal) prior to intracardiac puncture for blood collection. There were no significant differences in the time to anaesthesia between treated and control animals, reflecting no apparent effects related to the CNS. Blood was collected into a serum SST gel and clot activator tube (Becton Dickinson, Le Pont de Claix, France) and was centrifuged (1000×g for 10 min at room temperature) to separate serum. Serum was analyzed within 24 h on a laboratory bench Clinical Chemistry Analyser c111 (Roche Diagnostics, Lda). Liver injury was assessed by measuring the rise in the serum levels of alanine aminotransferase (ALT, a specific marker for hepatic parenchymal injury), aspartate aminotransferase (AST, a nonspecific marker for hepatic injury) and lactate dehydrogenase (LDH, a marker of nonspecific cellular injury). Serum levels of creatinine was determined as marker of renal injury. Serum levels of total cholesterol, low-density cholesterol (LDL), high-density cholesterol (HDL) and triglycerides were also measured to evaluate the effect of the drugs on lipid homeostasis. Results were expressed as the means with their standard errors and were compared using a one-factorial ANOVA test, followed by a Bonferroni's multi-comparison post hoc test. A P value<0.05 was considered to be statistically significant.
  • In an embodiment, the in vitro activity against the liver stage of Plasmodium infection was also carried out: inhibition of liver stage Plasmodium infection by test compounds was determined by measuring the luminescence intensity in Huh-7 cells infected with a firefly luciferase-expressing P. berghei line, as previously described. Briefly, Huh-7 cells, a human hepatoma cell line, were cultured in 1640 RPMI medium supplemented with 10% v/v fetal bovine serum, 1% v/v nonessential amino acids, 1% v/v penicillin/streptomycin, 1% v/v glutamine, and 10 mM 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (HEPES), pH 7, and maintained at 37° C. with 5% CO2. For infection assays, Huh-7 cells (1.0×104 per well) were seeded in 96-well plates the day before drug treatment and infection. The medium was replaced by medium containing the appropriate concentration of each compound approximately 1 h prior to infection with sporozoites freshly obtained through disruption of salivary glands of infected female Anopheles stephensi mosquitoes. Sporozoite addition was followed by centrifugation at 1700×g for 5 min. Parasite infection load was measured 48 h after infection by a bioluminescence assay (Biotium). The effect of the compounds on the viability of Huh-7 cells was assessed by the AlamarBlue assay (Invitrogen, U.K.) using the manufacturer's protocol.
  • In an embodiment, the antimicrobial activity, anti-HIV activity, the cellular viability of spiro-3H-pyrazole-γ-lactams and spiro-3H-pyrazole-δ-lactams was carried out in a similar way to the synthesis of spiro-β-lactams.
  • According to the latest WHO HIV Drug Resistance Report14, HIV drug resistance is rising globally. Levels of pretreatment resistance to efavirenz or nevirapine, the most widely used drugs in first-line ART, reached ≥10% in six out of 11 countries that reported pretreatment drug resistance survey data. Likewise, NNRTI resistance among people retained on ART ranged from 4% to 28%, while among people with unsuppressed viral load on first-line NNRTI regimens, it ranged from 47% to 90%.
  • In an embodiment, the synergistic interaction between BSS-730A and AMD3100 studies on the activity of BSS-730A was carried out as follows. The interaction between BSS-730A and AMD3100, a CXCR4 antagonist, was examined in a single-round viral infectivity assay using TZM-bI reporter cells. Cells were incubated for one hour with compounds and then were infected with 200 TCID50 of HIV-1 strain SG3.1. After 48 h of infection, luciferase expression was quantified. Serial two-fold dilutions of a fixed combination of BSS-730A and AMD3100 were tested. Each concentration of BSS-730A and AMD3100 was also tested alone. Duplicate cultures were maintained for each compound concentration and for infected and uninfected controls. The synergism was determined by using CalcuSyn software (Biosoft, Cambridge, UK). Combination indices (CIs) were calculated based on the median-effect principle15, 16, where CI<0.9 indicates a synergistic effect (CI values were interpreted as follows: 0.9>CI>0.85: slight synergism, 0.85>CI>0.7: moderate synergism, 0.7>CI>0.3: synergism, 0.3>CI>0.1: strong synergism, CI<0.1: very strong synergism), 0.9<CI<1.1 indicates an additive effect, and CI>1.1 indicates an antagonism effect. Because high effect degrees are more important to the treatment than low effect degrees, the weighted average CI value was assigned as CIwt=[CI50+2CI75+3CI90]/10, where CI50, CI75 and CI90 are the CI values at 50, 75 and 90 inhibition, respectively15, 16.
  • In an embodiment, the BSS-730A is active against multidrug resistant isolates. The activity of the spiro-β-lactam with the higher anti-HIV activity (BSS-730A) was evaluated against eight drug resistant HIV-2 primary isolates and a control isolate that is sensitive to all antiretroviral drugs (isolate 03PTHCC19) (Table 3). BSS-730A was highly active against all isolates with a median IC50 fold-change of 2.39 and median IC90 fold-change of 1.09 relative to the control isolate 03PTHCC19 (Table 3 and FIG. 8 ). These results suggest that BSS-730A could be used to treat infections caused by multidrug resistant isolates17.
  • TABLE 3
    Activity of BSS-730A against drug-resistant HIV primary isolates
    Susceptibility IC50 IC90
    to antiretroviral IC50 IC90 Fold Fold
    Virus Tropism drugs1 (μM) (μM) change2 change3
    03PTHCC19 R5 Sensitive 0.008 0.064
    00PTHCC20 X4 Resistant to ABC, 0.018 0.073 2.25 1.14
    ZDV, d4T, ddl,
    LPV
    03PTHCC20 X4 Resistant to ABC, 0.019 0.095 2.38 1.48
    ZDV, d4T, ddl,
    LPV
    00PTHDECT R5/X4 Resistant to DTG 0.023 0.057 2.88 0.89
    03PTHSM9 X4 Resistant to SQV, 0.016 0.116 2.00 1.81
    LPV, DRV and
    TAF
    10PTHSJIG R5 Resistant to RAL, 0.012 0.032 1.50 0.50
    DTG, LPV, SQV,
    DRV and all
    NRTIs
    15PTHSJIG R5 Resistant to RAL, 0.018 0.056 2.25 0.88
    DTG, 3TC and
    FTC
    15PTHCEC X4 Resistant to RAL, 0.017 0.051 2.13 0.79
    DTG, LPV, SQV,
    DRV, ABC, ddl,
    TDF, TAF, 3TC,
    d4T and FTC
    1Susceptibility profile to antiretroviral drugs.
    2Relative to IC50 of wild type isolate 03PTHCC19;
    3Relative to IC90 of wild type isolate 03PTHCC19;
    ND—not determined;
    ABC, abacavir;
    ZDV, zidovudine;
    d4T, stavudine;
    ddl, didanosine; 3
    TC, lamivudine;
    FTC, emtricitabine;
    TDF, tenofovir disoproxil fumarate;
    TAF, tenovovir alafenamide;
    LPV, lopinavir
    SQV, saquinavir;
    DRV, darunavir;
    DTG, dolutegravir;
    RAL, raltegravir;
    NRTIs, nucleoside reverse transcriptase inhibitors.
  • In an embodiment, BSS-730A displays a synergistic interaction with AMD3100. The activity of BSS-730A was preliminarily assessed in a combination experiment with AMD3100, an entry inhibitor that binds to the CXCR4 co-receptor, in a single cycle assay in TZM-bI cells against HIV-1 SG3.1. Different ratios were tested: AMD3100+BSS-730A (1:1.4), AMD3100+BSS-730A (1:4.21) and AMD3100+BSS-730A (2.14:1). Combination indices (CI) were calculated to determine whether synergistic, additive or antagonistic effects occurred after these combinations. CI calculations showed synergism or strong synergism at 50, 75, and 90% inhibition of HIV-1 (CI: 0.27-0.39) for the first and second drug combinations where BSS-730A was in a higher concentration relatively to AMD3100 (Table 4). When AMD3100 was in a higher concentration, the CI calculations showed an additive effect at 50 and 75% inhibition of HIV-1 (CI:0.93-0.97) and a slight synergism at 90% inhibition of HIV-1 (CI: 0.88). The strongest synergistic interactions were observed with AMD3100+BSS-730A (1:1.4) and AMD3100+BSS-730A (1:4.21) combinations that presented CI wt of 0.21 and 0.18, respectively. The strong synergy between BSS-730A and AMD3100 suggest that BSS-730A could be used in combination with entry inhibitors to treat or prevent HIV infection.
  • TABLE 4
    Synergistic interaction between BSS-730A and AMD3100.
    Drug combination CI values at inhibition ofa:
    (combination ratio) 50% 75% 90% CIwt-valuesc
    AMD3100 + BSS-730A 0.38572 0.36094 0.33801 0.21
    (1:1.4) +++ +++ +++ ++++
    AMD3100 + BSS-730A 0.37132 0.31846 0.27351 0.18
    (1:4.21) +++ +++ ++++ ++++
    AMD3100 + BSS-730A 0.97482 0.92757 0.8829  0.55
    (2.14:1) ad ad + +++
    aCI > 1.1 indicates antagonism (—), 1.1 > CI > 0.9 indicates the additive effect (ad) and CI < 0.9 indicates a synergistic effect;
    bSynergy levels: 0.9 > CI > 0.85: + (slight synergism); 0.85 > CI > 0.7: ++ (moderate synergism); 0.7 > CI > 0.3: +++ (synergism); 0.3 > CI > 0.1: ++++ (strong synergism); CI < 0.1; +++++ (very strong synergism);
    cBecause high degree effects are more important to the treatment than the low degree effects, the weighted average CI value was assigned as CIwt = [CI50 + 2CI75 + 3CI90]/10, where CI50, CI75 and CI90 are the CI values at 50, 75 and 90, inhibition, respectively.
  • Therefore, the combinations of BSS-730A with the entry inhibitor AMD3100 showed significant synergistic effect indicating this combination of drugs might be useful to treat and/or prevent infection caused by CXCR4-using HIV isolates which are usually found in late stage disease and are associated with disease progression18.
  • Furthermore, the present disclosure also shows that BSS-730A was highly active against HIV isolates that were resistant to several protease inhibitors (LPV, SQV, DRV), integrase inhibitors (RAL, DTG) and to all NRTIs. These results indicate that BSS-730A should be useful to treat or prevent infection by multidrug resistant HIV isolates.
  • The term “comprising” whenever used in this document is intended to indicate the presence of stated features, integers, steps, components, but not to preclude the presence or addition of one or more other features, integers, steps, components or groups thereof.
  • It will be appreciated by those of ordinary skill in the art that unless otherwise indicated herein, the particular sequence of steps described is illustrative only and can be varied without departing from the disclosure. Thus, unless otherwise stated the steps described are so unordered meaning that, when possible, the steps can be performed in any convenient or desirable order.
  • Flow diagrams of particular embodiments of the presently disclosed methods are depicted in figures. The flow diagrams do not depict any particular means, rather the flow diagrams illustrate the functional information one of ordinary skill in the art requires to perform said methods in accordance with the present disclosure.
  • The disclosure should not be seen in any way restricted to the embodiments described and a person with ordinary skill in the art will foresee many possibilities to modifications thereof.
  • The above described embodiments are combinable.
  • The following claims further set out particular embodiments of the disclosure.
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Claims (11)

1-31. (canceled)
32. A method of treating a patient infected with one or more infectious diseases, the method comprising:
administering a composition to the patient, wherein the composition comprises
a therapeutically effective amount of one of the following compounds:
Figure US20230285366A1-20230914-C00025
Figure US20230285366A1-20230914-C00026
33. The method of claim 32, wherein the infectious diseases are caused by pathogenic agents selected from a virus, a protozoan, and mixtures thereof.
34. The method of claim 32, wherein the infectious diseases are selected from acquired immunodeficiency syndrome, malaria, hepatitis A, hepatitis B, hepatitis C, hepatitis D or hepatitis E, herpes simplex infection, human papillomavirus infection, and respiratory infections caused by viruses.
35. The method of claim 32, wherein the infectious disease is caused by an agent selected from: human immunodeficiency virus, human immunodeficiency virus-2 group A, human immunodeficiency virus-2 group B, human immunodeficiency virus-1 group M, human immunodeficiency virus-1 group O, human immunodeficiency virus-1 group N, human immunodeficiency virus-1 group P, hepatitis A virus, hepatitis B virus, hepatitis C virus, hepatitis D virus, hepatitis E virus, herpes simplex virus 1, herpes simplex virus 2, human filovirus, togavirus, alphavirus, arenavirus, bunyavirus, flavivirus, human papillomavirus, human influenza A and B viruses, Asian flu virus, herpes zoster, severe acute respiratory syndrome coronaviruses, Respiratory Syncytial virus type A and B, and Plasmodium spp.
36. The method of claim 32, wherein the infectious disease is a human immunodeficiency virus infection or Plasmodium spp. infection.
37. The method of claim 32, wherein the patient is co-infected with HIV and Plasmodium, and wherein the compound exhibits inhibitory activity against human immunodeficiency virus (HIV) and Plasmodium species.
38. The method of claim 33, wherein the infectious disease is caused by a virus, and wherein the virus is human immunodeficiency virus-2 group A, human immunodeficiency virus-2 group B, human immunodeficiency virus-1 group M, human immunodeficiency virus-1 group O, human immunodeficiency virus-1 group N, or human immunodeficiency virus-1 group P.
39. The method of claim 33, wherein the infectious disease is caused by a protozoan, and wherein the protozoan is a Plasmodium species selected from the group consisting of: Plasmodium falciparum, Plasmodium ovale, Plasmodium vivax, Plasmodium malariae, and Plasmodium knowlesi.
40. The method of claim 32, wherein the composition administered to the patient further comprises an additional active ingredient, wherein the additional active ingredient is a HIV protease inhibitor (PI), a HIV nucleoside reverse transcriptase inhibitor (NRTI), a HIV non-nucleoside reverse transcriptase inhibitor (NNRTI), a HIV integrase inhibitor, a HIV entry inhibitor, or mixtures thereof.
41. The method of claim 32, wherein the composition administered to the patient further comprises an antiviral agent, an anti-malarial agent, an immunomodulator agent, an analgesic agent, an anti-inflammatory agent, an antibiotic agent or a diuretic agent.
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