US20160333367A1 - Method for improving stem volume growth and biomass production in trees - Google Patents

Method for improving stem volume growth and biomass production in trees Download PDF

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US20160333367A1
US20160333367A1 US15/108,992 US201415108992A US2016333367A1 US 20160333367 A1 US20160333367 A1 US 20160333367A1 US 201415108992 A US201415108992 A US 201415108992A US 2016333367 A1 US2016333367 A1 US 2016333367A1
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acid sequence
nucleic acid
tree
cambial
cytokinin
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Juha Immanen
Yrjö HELARIUTTA
Kaisa Nieminen
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Stora Enso Oyj
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    • C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/82—Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
    • C12N15/8216—Methods for controlling, regulating or enhancing expression of transgenes in plant cells
    • C12N15/8222—Developmentally regulated expression systems, tissue, organ specific, temporal or spatial regulation
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    • C12N15/09—Recombinant DNA-technology
    • C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/82—Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
    • C12N15/8241—Phenotypically and genetically modified plants via recombinant DNA technology
    • C12N15/8261—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield
    • C12N15/8291—Hormone-influenced development
    • C12N15/8295—Cytokinins
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    • C12Y205/01—Transferases transferring alkyl or aryl groups, other than methyl groups (2.5) transferring alkyl or aryl groups, other than methyl groups (2.5.1)
    • C12Y205/01027—Adenylate dimethylallyltransferase (2.5.1.27)
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    • C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
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    • Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
    • Y02A40/00—Adaptation technologies in agriculture, forestry, livestock or agroalimentary production
    • Y02A40/10—Adaptation technologies in agriculture, forestry, livestock or agroalimentary production in agriculture
    • Y02A40/146—Genetically Modified [GMO] plants, e.g. transgenic plants

Definitions

  • the present invention relates to a method for producing a transgenic plant capable of increased stem volume growth and/or biomass production and also to a method for improving the stem volume growth and/or the production of biomass in trees.
  • the invention relates also to a genetically modified tree, a wood product derived from said tree, genetic constructs and vectors and a tree expressing said genetic constructs and vectors.
  • Cambial meristem forms a thin cylinder along a tree trunk (or a root or branch), and it produces new vascular tissues both inwards and outwards.
  • These tissues, secondary xylem and phloem form the bulk of lateral growth in plant organs.
  • the conducting vascular cells in both of them acquire their final functional form gradually, through a multi-step differentiation process.
  • the developing xylem cells will undergo expansion, secondary cell wall formation, programmed cell death and final lignification.
  • functional phloem cells will be formed through the succession of several developmental steps, including the differentiation of sieve elements and companion cells.
  • Cytokinin signaling has been shown to be required for cambial function.
  • Transgenic Populus trees with impaired cytokinin signaling displayed compromised radial growth caused by a decreased number of cell divisions in the vascular cambium (Nieminen et al., 2008).
  • genes encoding cytokinin receptors and cytokinin primary response genes were abundant in the cambial region of Populus stem (Nieminen et al., 2008).
  • IPT isopentenyl transferase
  • One object of the present invention is to provide a solution to the problems encountered in the prior art. Specifically, the present invention aims to provide a solution how to improve the growth of trees. Furthermore, the present invention aims to increase the stem volume growth and production of biomass in trees.
  • the invention is based on the finding that it is possible to enhance the cell division in the cambial cells by enhancing the cytokine signaling in cambial cells. More specifically, it is possible to enhance the cell division in cambial cells by allowing expression of specific genes encoding cytokinin biosynthetic isopentenyl-transferase enzyme in cambial cells.
  • the present invention provides a genetic construct comprising a first nucleic acid sequence (effector) encoding cytokinin biosynthetic isopentenyl-transferase enzyme operable linked to a second nucleic acid sequence (promoter) allowing expression of said first nucleic acid sequence in cambial cells as defined in claim 1 .
  • the present invention provides in another aspect a vector comprising the genetic construct as defined in claim 7 .
  • the present invention provides a tree which overexpresses an endogenous nucleic acid sequence, or expresses an exogenous nucleic acid sequence, encoding cytokinin biosynthetic isopentenyl-transferase enzyme in cambial cells as defined in claim 8 .
  • the present invention provides a wood product obtainable from the tree as defined in claim 16 .
  • the present invention provides a method for producing a transgenic plant capable of increased biomass production and/or increased stem volume growth compared to wild type plant as defined in claim 17 .
  • the present invention provides a method for improving the production of biomass and/or increased stem volume growth in trees as defined in claim 18 .
  • FIG. 1 Phylogenetic tree indicating the average distance of various IPTs, AtIPT5 being the closest Arabidopsis ortholog for the AtIPT7.
  • FIG. 2 conserveed domains within IPTs: domains A, B and C from different origin and the corresponding domains A′, B′ and C′ in Arabidopsis thaliana .
  • x means any amino acid
  • x in parentheses (x) means an amino acid not required.
  • Brackets denote any one of the amino acid residues in brackets [ ]
  • FIG. 3 Comparison of the amino acid sequences of AtIPT7 and AtIPT5 orthologs and the consensus sequence with over 50% similar identity (capital letters indicate amino acids with 100% identical amino acids, whereas lowercase letters indicate identical amino acids in 50-90% of the compared sequences).
  • FIG. 4 Part of the transformation vector inserted into the plant genome (ca. 8200 bp).
  • the construct map shows the different sites, together with their origin, estimated size and function.
  • FIG. 5A Phenotypes of WT and pLMX5-IPT7 line 1 and 3 Populus trees in the age of three months.
  • FIG. 5B The trunk volume of the transgenic pLMX5-IPT7 Populus lines 1 and 3 as compared to the WT.
  • FIG. 5C Cytokinin responsiveness assay of the WT and pLMX5-IPT7 lines.
  • FIG. 5D Expression of a cytokinin receptor (PttHK3a), a cytokinin signaling primary response gene (type-A RR PttRR7) and an auxin signaling marker gene (PttIAA3) in the WT and pLMX5-IPT7 line 1 stem.
  • a cytokinin receptor PttHK3a
  • a cytokinin signaling primary response gene type-A RR PttRR7
  • PtIAA3 auxin signaling marker gene
  • FIG. 6 Cambial anatomy, hormonal content and hormonal signaling profiles of WT (A) and transgenic Populus line pLMXS::IPT7 line 1 stem (B). Four fractions (A-D) were collected for the hormonal analysis (A, B).
  • the present invention provides transgenic trees having increased stem volume growth and/or biomass production. Genetic constructs and vectors are described useful in producing said transgenic trees as well as methods used in producing these trees.
  • the present invention provides a genetic construct comprising a first nucleic acid sequence (effector) encoding cytokinin biosynthetic isopentenyl-transferase enzyme operable linked to a second nucleic acid sequence (promoter) allowing expression of said first nucleic acid sequence in cambial cells.
  • a first nucleic acid sequence is meant here an effector gene, which encodes cytokinin biosynthetic isopentenyl-transferase enzyme.
  • the first nucleic acid sequence is selected from the group of
  • the invention encompasses also embodiments where the first nucleic acid sequence encodes an amino acid sequence comprising a conserved domain area A′, B′ and/or C′ having an amino acid sequence of domain A′, B′ and/or C′ of Arabidopsis thaliana as shown in FIG. 2 .
  • IPTs cytokinin biosynthetic isopentenyl-transferase enzyme
  • AtIPT7 orthologs identified from Populus trichocarpa PtIPT7a eugene3.00041149; PtIPT7b eugene3.00080280; PtIPT5a fgenesh4_pg.C_LG_X000229; PtIPT5b_fgenesh4_pg.C_LG_VI11001825) and Eucalyptus grandis (Eucgr.B01146; Eucgr.G00473; Eucgr.G01887; Eucgr.H03602) genomes as shown in FIG. 3 .
  • AtIPT7 and AtIPT5 have been shown to form a clade together. AtIPT5 appears to be closest Arabidopsis ortholog for the AtIPT7. Between the AtIPT7 orthologs, the consensus sequence, called here consensus area D, with over 50% similar identity is shown in FIG. 3 (capital letters indicate amino acids with 100% identical amino acids, whereas lowercase letters indicate identical amino acids in 50-90% of the compared sequences). In A. thaliana IPT7 amino acids 40-141 correspond the conserved sequence, third line in FIG. 3 (in Sequence listing SEQ ID NO: 6).
  • BLAST Basic Local Alignment Search Tool
  • a BLAST search enables a researcher to compare a query sequence with a library or database of sequences, and identify library sequences that resemble the query sequence above a certain threshold. Different types of BLASTs are available according to the query sequences. The BLAST program was designed by Stephen Altschul (Altschul, 1990).
  • the gene encoding cytokinin biosynthetic isopentenyl-transferase enzyme can be selected among genes encoding different IPTs, preferably from the group of genes encoding IPTs, which belong to enzyme class EC 2.5.1.27.
  • cytokinin biosynthetic isopentenyl-transferase enzyme comprise a conserved domain area or areas A, B and/or C having an amino acid sequence or sequences selected from the group of SEQ ID NO: 3, 4 and 5.
  • the gene encoding cytokinin biosynthetic isopentenyl-transferase enzyme comprise a conserved domain area or areas A′, B′ and/or C′ having an amino acid sequence or sequences of the corresponding domain areas A′, B′ and/or C′ shown in FIG. 2 of 9 IPTs of Arabidopsis thaliana.
  • the gene encoding cytokinin biosynthetic isopentenyl-transferase enzyme comprise an area D having at least 80% identity, preferably at least 85% identity, more preferably at least 90% identity, still more preferably at least 95% identity, more and more preferably at least 98% identity, still more preferably at least 99% identity, most preferably 100% identity to amino acid sequence SEQ ID NO:6, (i.e. with the corresponding area in SEQ ID NO:2).
  • the other areas of the gene encoding cytokinin biosynthetic isopentenyl-transferase enzyme can vary in broader range than the area encoding conserved domain A, B and/or C or A′, B′ and/or C′ and/or area D.
  • the identity % in these areas can be less than 80%, less than 75%, less than 70%, less than 60%, or even less than 50%.
  • a gene encoding cytokinin biosynthetic isopentenyl-transferase enzyme encodes an amino acid sequence showing at least 80% identity, preferably at least 85% identity, more preferably at least 90% identity, still more preferably at least 95%, more and more preferably at least 98%, still more preferably at least 99%, most preferably at least 100% identity to SEQ ID NO: 2.
  • a gene encoding cytokinin biosynthetic isopentenyl-transferase enzyme can be selected among genes encoding different IPTs, preferably the gene encodes IPT 7 or IPT 5, more preferably IPT7.
  • a gene encoding cytokinin biosynthetic isopentenyl-transferase enzyme may be derived from any plant genera or species expressing a functional cytokinin biosynthetic isopentenyl-transferase enzyme.
  • the plant is an angiosperm, preferably an Arabidopsis , a Betula , a Populus or a Eucalyptus plant.
  • Arabidopsis thaliana isopentenyltransferase 7 (AtIPT7) is from Arabidopsis , the gene sequence, and functional analysis of a highly orthologous Arabidopsis IPT, AtIPT4, protein has been published by Kakimoto 2001.
  • the present invention has been exemplified by using Arabidopsis cytokinin biosynthetic isopentenyl-transferase enzyme IPT7 encoding gene (gene AT3G23630) SEQ ID NO: 1.
  • Said gene encodes amino acid sequence SEQ ID NO: 2.
  • amino acid sequence SEQ ID NO: 2 has been compared with IPTs from other sources, it has been found that close homologies can be found in domain area A, domain area B, and/or in domain area C or between different IPTs in Arabidopsis thaliana , it has been found that close homologies can be found in domain area A′, domain area B′, and/or in domain area C′ (see FIGS. 2 and 3 ).
  • the identity % of these areas between amino acid sequences from different origin is at least 80%, preferably at least 85%, more preferably at least 90%, still more preferably at least 95% even more preferably at least 97%, more and more preferably at least 98%, more and more preferably at least 99%, most preferably 100% identity.
  • genes functioning in similar manner as IPT7 gene from Arabidopsis from several other plant genera and species and/or from different IPTs. It is also possible to use nucleic acid sequences comprising substitutions, insertions, deletions or other modifications compared to SEQ ID NO:1, provided that the nucleic acid sequence encodes cytokinin biosynthetic isopentenyl-transferase enzyme, preferably belonging to enzyme class EC 2.5.1.27. More preferably the enzyme belongs to IPT7.
  • Nucleic acid sequences encoding cytokinin biosynthetic isopentenyl-transferase enzymes and which are used in the genetic constructs as described herein are typically sequences isolated from their origin, for example A. thaliana IPT7 is used in a genetic construct introduced to Populus cells to grow a transgenic Populus tree. However, it is also possible to enhance the expression of endogenous nucleic acid sequences encoding IPTs.
  • the genetic construct according to this disclosure comprises a second nucleic acid sequence, which is a promoter allowing expression of cytokinin biosynthetic isopentenyl-transferase enzyme in meristematic cells of a plant.
  • a promoter allowing expression of cytokinin biosynthetic isopentenyl-transferase enzyme in meristematic cells of a plant.
  • the promoter allows expression in cambial cells and apical cells, more preferably specifically in cambial cells.
  • a promoter is meant a DNA region binding RNA polymerase and directing the enzyme to the appropriate transcription initiation site for a particular polynucleotide sequence.
  • a promoter may additionally comprise other recognition sequences referred to as upstream promoter elements, which influence the transcription initiation rate.
  • birch meristem promoter pBpCRE1 An example of a promoter allowing expression in meristematic cells in cambium and in apical cells is birch meristem promoter pBpCRE1.
  • the promoter is preferably defined by SEQ ID NO: 7 (GenBank EU583454, Nieminen et al. 2008).
  • a promoter allowing expression in meristematic cells is a promoter allowing expression specifically in cambial cells.
  • a promoter allowing expression specifically in cambial cells.
  • Such specifically in cambial cells expressing promoter is Populus cambial specific promoter pLM5, preferably defined by SEQ ID NO: 8 (pLM5 promoter is described also in WO2004097024A1 as SEQIDNO4 LMX5 A055P19U).
  • the first nucleic acid sequence is operable linked to the second nucleic acid sequence (promoter).
  • operable linked is meant that two genetic elements are linked by a functional linkage, for example an effector gene is operable linked to a promoter allowing expression of the effector gene.
  • a genetic construct can contain also a selectable marker for the selection of cells comprising the introduced genetic construct.
  • Selectable markers are for example antibiotic resistances ampicilline, carbenicilline and hygromysin B resistance.
  • promoter pLMX5 which has been operably linked to the effector gene by inserting it into the close proximity of the effector gene in the Gateway 2 nd box cloning site ( FIG. 4 )
  • IPT7_Fwd GW primer (SEQ ID NO: 9) ACAAAAAAGCAGGCTTAATGAAGTTCTCAATCTCA IPT7_REV GW primer: (SEQ ID NO: 10) TACAAGAAAGCTGGGTATCATATCATATTGTGGG
  • transgenic trees with the LMX5::AtIPT7 construct display ectopic overexpression of Arabidopsis thaliana adenosine phosphate-isopentenyl-transferase 7 (IPT; EC 2.5.1.27), expressed in the cambial zone through the LMX5 promoter (described in Love et al. 2009).
  • IPT Arabidopsis thaliana adenosine phosphate-isopentenyl-transferase 7
  • cytokinin signaling has been stimulated by increasing the amount of cytokinin plant hormone in the cambial zone.
  • Suitable vector is for example bacterium Agrobacterium tumefaciens.
  • the present invention provides a tree, which overexpresses an endogenous nucleic acid sequence encoding cytokinin biosynthetic isopentenyl-transferase enzyme, or expresses an exogenous nucleic acid sequence encoding cytokinin biosynthetic isopentenyl-transferase enzyme.
  • the effector gene needs to be expressed in cambial cells.
  • a promoter allowing expression in meristematic cells generally.
  • it is of disadvantage if the cell division is enhanced in any meristematic cells. If for example the leaves of a tree are grown very large or tight that may of disadvantage, although the stem volume is increased at the same time.
  • a promoter allowing expression in cambial cells and apical cells is preferably used, since the overall growth of the tree is not huge, only the stem volume growth and growth of the height.
  • Most preferably a promoter is used, allowing expression specifically in cambial cells. In this case the stem volume growth is increased, but not the overall growth of the tree and not either the height of the tree is increased. All the comparisons are meant to be made to a wild type tree of the same species, age and growth conditions.
  • the effector gene can be introduced to a tree by using the genetic construct as described herein.
  • the expression of an effector gene being endogenous to a tree can be improved.
  • the expression of Populus IPT 7 can be improved.
  • Expression of the gene can be enhanced through ectopic overexpression, by driving the endogenous gene as through an alternative promoter, driving a higher expression level than the endogenous promoter. This can be done by introducing a novel copy of the endogenous gene, under the chosen promoter, into the genome.
  • expression of the endogenous gene can be enhanced through activation tagging, where enhancer elements are introduced into plant genome, where they are able to enhance transcription of genes in their proximity.
  • enhanced expression of the endogenous gene may also be attained through genome editing, e.g. with engineered nucleases, which can be used to delete silencor elements repressing expression of the desired genes.
  • a transgenic tree produced as described herein expresses at least 40%, preferably at least 44%, more preferably at least 46%, still more preferably at least 50%, more and more preferably at least 60% higher levels of cytokinin signaling in cambial cells during cambial development compared to a WT tree.
  • the stem volume growth in said tree is at least 35% higher, preferably at least 38%, more preferably at least 40%, still more preferably at least 45%, more and more preferably at least 50% higher compared to wild type (WT) tree.
  • the tree expressing an effector gene in cambial cells belongs preferably to angiosperms.
  • the tree is an annual tree or a perennial tree, preferably a perennial tree.
  • the tree belongs to genera Betula, Populus or Eucalyptus .
  • Preferably the tree belongs to genus Populus .
  • the Populus is selected from the group of Populus species P. tremula, P. alba, P. tremuloides, P. canescens, P. deltoids, P. fremontii, P. nigra, P. Canadensis, P. inopina and Populus tremula ⁇ tremuloides .
  • the function of the construct has been tested and confirmed in the hybrid aspen, Populus tremula ⁇ tremuloides.
  • the tree expressing an effector gene in cambial cells belongs to gymnosperms.
  • the tree is preferably spruce or pine.
  • the present invention encompasses also various wood products obtainable from the transgenic trees of the invention.
  • wood products are for example trunks, branches, roots and seeds.
  • the present invention provides also a method for producing a transgenic plant capable of increased biomass production and/or increased stem volume growth compared to wild type plant.
  • the method comprises the steps of
  • Agrobacterium based transformation methods for angiosperm trees have been published by e.g. Haggman et al. 2003, Seppanen et al. 2004 and Nilsson et al. 1992.
  • the method comprises that plants explants (leaf discs, stem segments, etc.) are incubated in an Agrobacterium culture, after which they are co-cultured with Agrobacterium bacteria on a solid culture medium.
  • Agrobacterium bacteria are removed by washing.
  • Plants explants are grown on a callus production medium supplemented by an antibiotic to limit the callus production to transgenic cells harbouring the antibiotic resistance gene.
  • the forming callus tissues are transferred onto a regeneration medium for shoot production.
  • the regenerated shoots are transferred onto a root induction medium. After the roots are formed, the plantlets can be grown in soil.
  • the present invention provides also a method for improving the production of biomass and/or increased stem volume growth in trees.
  • the method comprises the steps of
  • Agrobacterium mediated transformation plant explants are co-cultured with Agrobacterium bacteria containing the desired transgene.
  • Agrobacterium bacteria will transform plant cells in the explants through the integration of transgenic DNA into the plant genome. Placed on selectable rooting and shooting media, transgenic plants will be regenerated from the transformed cells.
  • particles of gold or tungsten are coated with DNA and shot into plant cells. Inserted DNA will integrate into the plant genome.
  • transient holes are formed in plant protoplast membranes using electric shock; this allows transgene DNA to enter plant protoplasts.
  • transgenic material will integrate into the plant genome.
  • biomass production is meant here the additional amount of biomass (stem dry weight mass) of transgenic trees compared to wild type trees at the same age.
  • stem dry mass of WT trees was measured at the age of 16 weeks (average of 3 trees) and was 35 ⁇ 2 (STDEV) g, whereas the stem of pLMX5-IPT7 trees (3 trees) was 51 ⁇ 8 g.
  • “increased stem volume growth” is meant here the additional amount of stem volume in transgenic trees compared to wild type trees at the same age.
  • stem volume was measured once per week, 3 measurements points (10 cm above soil level, middle tree, 2 cm below apex), volume was calculated by formula of fructa (sum of basal to middle and middle to apex).
  • V ⁇ ⁇ ⁇ h 3 ⁇ ( r 2 + rR + R 2 )
  • Transgenic IPT7 overexpressing trees had more stem volume compared to WT trees ( FIG. 5 ).
  • the stem volume growth in transgenic trees was in average 53% higher, and at least 38% higher, if standard errors were taken into account.
  • Transgenic trees expressed in average 83% and at least 44%, if standard errors were taken into account, higher levels of cytokinin signaling in cambial cells during cambial development compared to WT trees.
  • the present invention encompasses also applications where the transgenic tree is sterile tree not capable of flower, pollus or seed development. Methods used to produce sterile trees are known for a person skilled in the art.
  • Transgenic trees can be clonally propagated and tested for their sterility (for abolished, aborted or sterile flower, pollen or seed development).
  • transgenic trees displaying an elevated cytokinin signaling level is described herein.
  • the status and pattern of auxin and cytokinin distribution and signaling were analyzed.
  • the concentration of auxin and cytokinin profiles across the cambial meristem in Populus stem was characterized. Furthermore, to correlate the cytokinin hormonal profiling with cytokinin signaling, an extensive analysis of the expression profiles of cytokinin biosynthetic and signaling genes across the Populus cambial zone was made.
  • PtSUC2 was used as a phloem cell marker, PtANT, as a marker for dividing cambial cells, and PtCOMT2 for phloem fibers and xylem cells. The markers correlated well with the identity of the tissues determined through microscopy during the cryo-sectioning.
  • the present invention is based on a detailed analysis of cytokinin function in the regulation of cambial development in a tree stem.
  • cytokinin hormone has a concentration gradient across the cambial zone. The cytokinin concentration peak coincides with the high expression domain of biosynthetic and signaling genes of this hormone.
  • the cambial distribution profile of cytokinin is distinct, but partially overlapping with, the concentration profiles of auxin.
  • the high auxin concentration is restricted at the domain of actively dividing, undifferentiated cambial cells; whereas the high cytokinin concentration has a larger domain extending from the undifferented cambium to the developing phloem.
  • biomass accumulation in tree stem can be enhanced by stimulating cytokinin signaling in the transgenic Populus trees.
  • These trees displayed enhanced cytokinin responsiveness together with an elevated level of cytokinin signaling.
  • the cambial cell division activity of the transgenic trees was increased as compared to the WT trees, and respectively the radial growth of the stem was accelerated.
  • the stimulatory effect of cytokinin on the radial growth was independent of the apical growth rate.
  • this stimulative action of cytokinin appeared to take place through crosstalk between CK and auxin: an elevated CK concentration and signaling increased the level and widened the domain of auxin concentration and signaling in the cambial region.
  • the partially overlapping domains of auxin and cytokinin action have specific functions in the regulation of different developmental processes taking place across the cambial zone.
  • Cross-talk between auxin and cytokinin at the middle of the cambium may define the stem cell niche for the maintenance of an actively dividing cell pool.
  • the high cytokinin to auxin ratio at the phloem side of the cambial zone contributes to the determination of the phloem identity of the developing vascular cells.
  • transgenic Populus ( P. tremula ⁇ tremuloides ) trees were engineered to display elevated cytokinin signaling during cambial development.
  • AtIPT7 gene from Arabidopsis encoding a cytokinin biosynthetic isopentenyltransferase was used.
  • the AtIPT7 was expressed under the cambial specific PttLMX5 promoter (Love et al. 2009), which shows a high expression in the cambial and developing xylem cells.
  • FIG. 5A To evaluate the effect of AtIPT7 activity on tree development, growth dynamics of the transgenic trees was studied under greenhouse conditions ( FIG. 5A ).
  • the apical growth rate of the pLMX5::AtIPT7 lines was similar to wild-type plants; the transgenic plants had the same height as the controls at the same age ( FIG. 5A ).
  • the diameter of the stem was increased in the transgenic trees as compared to the WT trees.
  • the stem volume which was counted as the additive volume of internodes without the leaves, was larger than that of the WT trees ( FIG. 5B ).
  • FIG. 5A shows the phenotypes of WT and pLMX5-IPT7 line 1 and 3 Populus trees in the age of three months. All trees had similar height.
  • FIG. 5B shows the trunk volume of the transgenic pLMX5-IPT7 Populus lines 1 and 3 as compared to the WT.
  • the total stem volume of the transgenic lines was increased as compared to the WT. Values are averages ( ⁇ SD) from five individual trees per each line.
  • cytokinin responsiveness of the transgenic trees was tested.
  • classic cytokinin responsiveness assay Skoog & Miller 1957
  • a low cytokinin-to-auxin ratio induces root regeneration from plant segments and a high cytokinin-to-auxin ratio promotes instead shoot regeneration.
  • shoot segments were cut from greenhouse grown transgenic and WT lines, and then grown in in vitro conditions on a medium with a varying concentration of trans-Zeatin (tZ).
  • FIG. 5C depicts cytokinin responsiveness assay of the WT and pLMX5-IPT7 lines.
  • Stem segments were grown on a medium with 0.5 mg/L auxin (IAA) and 0, 0.5 or 1.5 mg/L cytokinin t-zeatin.
  • IAA auxin
  • Transgenic lines regenerated shoots already in low cytokinin concentrations (0.5 mg/L), whereas WT required a higher (1.5 mg/L) concentration of this hormone.
  • the status of cambial cytokinin signaling in the transgenic trees was studied.
  • the expression levels of two cytokinin marker genes were analyzed. Two marker genes were used to evaluate the cytokinin signaling level: a cytokinin receptor PttHK3a and a type-A response regulator PttRR7.
  • the level of auxin signaling was studied through an auxin signaling marker gene (PttIAA3).
  • the PttRR7 represents a primary response gene of cytokinin phosphorelay: expression of A-type response regulator genes is upregulated by cytokinin signaling: the expression level of this gene reflects the level of cytokinin response taking place in the analyzed trees.
  • the expression of cytokinin receptor PttHK3a was essentially the same as in the WT trees whereas the expression levels of PttRR7 and PttIAA3 were elevated ( FIG. 5D ).
  • FIG. 5D depicts the expression of a cytokinin receptor (PttHK3a), a cytokinin signaling primary response gene (type-A RR PttRR7) and an auxin signaling marker gene (PttIAA3) in the WT and pLMX5-IPT7 line 1 stem.
  • the expression levels of PttRR7 and PttIAA3 were elevated in the pLMX5-IPT7 line as compared to WT, whereas the expression of PttHK3a was not affected.
  • the cambial anatomy of transgenic trees was analyzed.
  • Meristematic undifferentiated cambial cells were defined in the cross-sections as the small and flat, thin-walled cells localized in the cambial cell files between the differentiating xylem and phloem cells.
  • the first differentiating xylem and phloem cells were defined as having a larger and more round size.
  • the vascular cambium contained more meristematic cells in the cambial cell files than the WT trees (24 vs 15) ( FIG. 6A-B ). Based on the increased cell number, it can be concluded that the cambial cell files were undergoing additional cell divisions, as compared to the WT.
  • the elevated cytokinin signaling level also affected the morphology of the produced xylem cells.
  • the dimensions of the xylem cells, vessels and fibers was analyzed, in macerated stem samples. As compared to the WT trees, the length and width of the xylem cells in the IPT7-trees was not significantly different.
  • auxin and cytokinin signaling marker genes were characterized across the cambial zone.
  • PttRR7 was used as a marker for cytokinin and PttIAA3 for auxin signaling.
  • cryosections representing phloem, developing phloem, cambium, developing xylem and xylem were analyzed.
  • the PttSUC2 and PttCOMT were used as marker genes for phloem and phloem fibers and xylem cells, respectively, to confirm the identity of the sections.
  • Two wild-type trees and two IPT7 trees were analyzed.
  • the RR7 expression peaks in the developing phloem tissue, where also the phloem marker PtSUC2 has high expression ( FIG. 6 ).
  • Cambium where the phloem and xylem markers have low expression levels, displays high IAA3 and rising RR7 expression levels.
  • Developing xylem tissue has high IAA3 and a rising COMT expression, whereas in maturing xylem only the xylem marker expression is high.
  • the IPT7-trees have a wider domain of high auxin signaling.
  • the cambium which is a domain of high RR7 and IAA3 expression
  • developing xylem a domain of high IAA3 and moderate RR7 expression
  • tissues are larger in the transgenic lines as compared to the WT tree ( FIG. 6 ).
  • This widened domain of auxin signaling corresponds with the increase in the number of meristematic cells.
  • the width of high cytokinin concentration domain (fractions 3-7 in both WT and pLMX5::IPT7) was instead not affected.
  • the cambial domain with high auxin marker gene expression and decreasing cytokinin marker gene expression (WT fractions 5-7 vs pLMX5::IPT7 fractions 5-11) was wider in the transgenic line than in the WT tree (3 vs 7 fractions).
  • the level of transgene AtIPT7 expression was below detection limit in WT, whereas had a high expression at the cambial zone of the pLMX5::IPT7 tree.

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US20230203520A1 (en) * 2020-05-06 2023-06-29 Salk Institute For Biological Studies Expression of ipt7 from tss promoter increases root mass and carbon sequestration
CN119955847A (zh) * 2025-04-11 2025-05-09 聊城大学 PagSIZ1基因在调控杨树生长发育中的应用
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CN117568396B (zh) * 2023-11-20 2025-02-18 西南大学 过量表达毛白杨独脚金内酯受体PtoD14基因在提高木材产量中的应用
CN119614619A (zh) * 2025-01-17 2025-03-14 西南大学 毛白杨IPT5b基因在创制高产耐荫杨树种质上的应用

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CN114555796A (zh) * 2019-09-20 2022-05-27 由农业部部长代表的美利坚合众国 用于修饰植物特征而不修饰植物基因组的组合物和方法
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CN119955847A (zh) * 2025-04-11 2025-05-09 聊城大学 PagSIZ1基因在调控杨树生长发育中的应用

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