TWI701262B - Immunogenic peptide and use thereof - Google Patents

Immunogenic peptide and use thereof Download PDF

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TWI701262B
TWI701262B TW107133150A TW107133150A TWI701262B TW I701262 B TWI701262 B TW I701262B TW 107133150 A TW107133150 A TW 107133150A TW 107133150 A TW107133150 A TW 107133150A TW I701262 B TWI701262 B TW I701262B
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peptide
cancer
cells
hla
helper
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TW201915014A (en
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宋旺洲
劉士任
林旻翰
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財團法人國家衛生研究院
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Abstract

The present invention relates to an immunogenic peptide comprising a T cell epitope peptide derived from tumor necrosis factor receptor-associated protein 1 (TRAP1), and the immunogenic peptide is able to induce cytotoxic T lymphocytes. In addition, the present invention also relates to a drug comprising the above immunogenic peptide for treating a cancer associated with the overexpression of TRAP1.

Description

免疫原性胜肽及其用途 Immunogenic peptides and their uses

本發明係關於一種免疫原性肽及其用於治療癌症的用途,其特徵在於,該免疫原性胜肽為衍生自腫瘤壞死因子受體相關蛋白1(TRAP1)的T細胞抗原決定位胜肽,其能夠在癌症患者中引發針對癌細胞的細胞毒性T細胞反應以治療癌症。 The present invention relates to an immunogenic peptide and its use in the treatment of cancer, characterized in that the immunogenic peptide is a T cell epitope peptide derived from tumor necrosis factor receptor related protein 1 (TRAP1) , Which can trigger a cytotoxic T cell response against cancer cells in cancer patients to treat cancer.

腫瘤壞死因子受體相關蛋白1(Tumor necrosis factor receptor-associated protein 1,TRAP1)是熱休克蛋白90(Hsp90)的同源物,其被證實與Hsp90有類似的方式會在粒線體內結合並水解ATP。最近,積累的證據已經指出TRAP1會大量表現於癌細胞內,且在與致癌機轉(tumorigenesis)相關的粒線體轉變作用上扮演重要的角色。相反地,下調TRAP1被發現會加速癌細胞的細胞凋亡,並展現出抑制致瘤性轉化(neoplastic transformation)的能力,這表明靶向TRAP1可被評估為用於癌症治療的潛在策略。基於序列的相似性,Hsp90的抑製劑和其衍生物在理論上為理想的候選藥物,用以將TRAP1去活性;然而,它們的抑制機制存在著爭議,因為這些分子可能缺乏特異性,以至於無法區別TRAP1和其他伴蛋白同源物(chaperone homologs);也因如此,轉而提高針對正常細胞中客 戶蛋白(client protein)表現的作用和體內平衡的關注度。因此,新的TRAP 1靶向策略是必要的。 Tumor necrosis factor receptor-associated protein 1 (TRAP1) is a homolog of heat shock protein 90 (Hsp90), and it has been confirmed that it binds and hydrolyzes in mitochondria in a similar manner to Hsp90 ATP. Recently, accumulated evidence has pointed out that TRAP1 will be present in cancer cells in large quantities and play an important role in the mitochondrial transformation associated with tumorigenesis. Conversely, down-regulation of TRAP1 was found to accelerate the apoptosis of cancer cells and exhibit the ability to inhibit neoplastic transformation, indicating that targeting TRAP1 can be evaluated as a potential strategy for cancer treatment. Based on sequence similarity, Hsp90 inhibitors and its derivatives are theoretically ideal drug candidates for inactivating TRAP1; however, their inhibitory mechanism is controversial because these molecules may lack specificity, so It is impossible to distinguish TRAP1 from other chaperone homologs; because of this, the focus on the role of client protein in normal cells and homeostasis has been increased. Therefore, a new TRAP 1 targeting strategy is necessary.

在靶向細胞內腫瘤相關蛋白的方面,誘發細胞毒性T淋巴細胞(cytotoxic T lymphocyte,CTL)可以做為替代方案,其涉及到與人類白血球抗原(human leukocyte antigen,HLA)相關的胜肽的免疫監視作用。HLA-A、HLA-B、HLA-C負責呈現細胞內蛋白質的胜肽片段供CD8+ T細胞辨識。HLA分子會將癌症相關蛋白的異常胜肽呈現給T細胞,導致T細胞活化,進而透過特異性細胞溶解反應(cytolysis responses)消滅目標癌細胞。時至今日,抗原特異性CTL的誘發仍然被認為是清除腫瘤的有效策略。為了達到這目的,發現誘發CTL免疫反應所需的潛在抗原決定位(epitope)為一關鍵性步驟,故需要鑑別出能夠結合HLA分子的癌細胞上的TRAP1的特異性胜肽。 In terms of targeting intracellular tumor-related proteins, inducing cytotoxic T lymphocyte (CTL) can be used as an alternative, which involves the immunity of peptides related to human leukocyte antigen (HLA) Monitoring role. HLA-A, HLA-B, and HLA-C are responsible for presenting peptide fragments of intracellular proteins for CD8 + T cells to recognize. HLA molecules present abnormal peptides of cancer-related proteins to T cells, leading to activation of T cells, and then destroying target cancer cells through specific cytolysis responses. To this day, the induction of antigen-specific CTL is still considered an effective strategy to eliminate tumors. In order to achieve this goal, the discovery of potential epitopes required for inducing CTL immune response is a key step. Therefore, it is necessary to identify the specific peptides of TRAP1 on cancer cells that can bind to HLA molecules.

質譜分析法(Mass spectrometry,MS)可作為分析HLA上所呈現的胜肽序列之有效工具。複雜的胜肽混合物可以被分離,然後在質譜儀中依序電離,再根據相對應的串聯式質譜圖(tandem MS(MS/MS)spectrum)分析胜肽序列和可能的轉譯後修飾(post-translational modifications,PTMs)。因此,發現到TRAP1上特異性共有的磷酸化位點參與酪氨酸(tyrosine)-蛋白質激酶Src介導的訊號路徑之阻斷機制,該訊號路徑是細胞轉化的交替信號。一般來說,這些失調的磷酸化蛋白會與泛蛋白(ubiquitin)結合以進行蛋白酶體降解來維持細胞的穩定性,因而導致磷酸化胜肽呈現在HLA分子的情況會提高。因此,HLA分子上呈現的磷酸 化胜肽與失調的磷酸化蛋白息息相關,故這些磷酸化胜肽是潛在的CTL胜肽候選物。 Mass spectrometry (MS) can be used as an effective tool for analyzing peptide sequences presented on HLA. Complex peptide mixtures can be separated and then ionized in sequence in a mass spectrometer. Then the peptide sequence and possible post-translational modifications (post-translation) can be analyzed according to the corresponding tandem MS (MS/MS) spectrum. translational modifications, PTMs). Therefore, it was discovered that the specifically shared phosphorylation site on TRAP1 is involved in the blocking mechanism of the tyrosine-protein kinase Src-mediated signaling pathway, which is an alternate signal for cell transformation. Generally speaking, these dysregulated phosphorylated proteins will bind to ubiquitin for proteasomal degradation to maintain cell stability, which will increase the appearance of phosphorylated peptides in HLA molecules. Therefore, the phosphorylated peptides displayed on HLA molecules are closely related to the dysregulated phosphorylated proteins, so these phosphorylated peptides are potential CTL peptide candidates.

因此,基於CTL抗原決定位所研發的癌症疫苗是一種具有未來前景的抗癌藥物。這種類型的癌症疫苗會針對表現標靶抗原的腫瘤細胞誘發細胞毒性反應,從而消滅腫瘤細胞。因此,鑑別出來自腫瘤標靶抗原的CTL抗原決定位對於基於CTL抗原決定位的癌症疫苗之研發上是必要的。 Therefore, the cancer vaccine developed based on the CTL epitope is an anti-cancer drug with future prospects. This type of cancer vaccine induces a cytotoxic response to tumor cells that express the target antigen, thereby destroying the tumor cells. Therefore, the identification of CTL epitopes derived from tumor target antigens is necessary for the development of cancer vaccines based on CTL epitopes.

本發明使用具有能編碼HLA-A*02:01基因的α1和α2結構域和小鼠H-2Db基因的α3跨膜結構域之基因的AAD轉殖基因小鼠,去模擬表現HLA-A2限制性抗原決定位的人類細胞株。在本發明中,選擇AAD轉染的小鼠肺部上皮癌細胞株TC1/AAD作為模型,用來發現TRAP1的潛在HLA-A2限制性細胞毒性T淋巴細胞(CTL)之抗原決定位。另外,單一AAD基因轉染可避免為確認所鑑定的胜肽的HLA類型所需的費力過程。序列分析表明TRAP1序列在人類和小鼠癌細胞株中具有高度保守性。基於這些特徵,假設小鼠TC1/AAD細胞和人類肺癌細胞呈現相似的TRAP1的HLA-A2限制性胜肽。借助基於MS的磷酸化蛋白質體學分析;從TC1/AAD細胞中鑑定出一種新的HLA-A2限制性TRAP1磷酸化胜肽。該胜肽具有新的磷酸化位點,是首次在TRAP1蛋白中觀察到。本發明證明TRAP1衍生的HLA-A2限制性磷酸化胜肽具有免疫原性,可以誘發CTL反應,且該磷酸化胜肽可特異性地使癌細胞細胞溶解並有效抑制AAD轉殖基 因小鼠上的腫瘤生長。這些抗腫瘤結果表明TRAP1衍生的HLA-A2限制性磷酸化胜肽在癌症治療上的治療功效。 The present invention uses AAD transgenic mice with genes encoding the α1 and α2 domains of the HLA-A*02:01 gene and the α3 transmembrane domain of the mouse H-2Db gene to simulate the expression of HLA-A2 restriction Human cell lines with sex epitopes. In the present invention, AAD-transfected mouse lung epithelial cancer cell line TC1/AAD is selected as a model to discover the potential HLA-A2-restricted cytotoxic T lymphocyte (CTL) epitope of TRAP1. In addition, single AAD gene transfection can avoid the laborious process required to confirm the HLA type of the identified peptide. Sequence analysis showed that the TRAP1 sequence is highly conserved in human and mouse cancer cell lines. Based on these characteristics, it is assumed that mouse TC1/AAD cells and human lung cancer cells exhibit similar HLA-A2 restricted peptides of TRAP1. With the aid of MS-based phosphorylation proteomics analysis; a new HLA-A2-restricted TRAP1 phosphorylation peptide was identified from TC1/AAD cells. This peptide has a new phosphorylation site, which is the first time it has been observed in TRAP1 protein. The present invention proves that the HLA-A2 restricted phosphorylation peptide derived from TRAP1 has immunogenicity and can induce CTL response, and the phosphorylation peptide can specifically lyse cancer cells and effectively inhibit AAD transgenic mice. Tumor growth. These anti-tumor results indicate the therapeutic efficacy of TRAP1-derived HLA-A2-restricted phosphorylated peptides in cancer treatment.

此外,本發明亦研發出一種脂化胜肽,該脂化胜肽是由上述的磷酸化胜肽、一脂質以及一輔助性T細胞抗原決定位所構成,其中該上述三者皆與一胺基酸進行連接。該脂化胜肽同樣會針對表現標靶抗原的腫瘤細胞誘發細胞毒性反應,達到抑制腫瘤的功效。同時,由於該脂化胜肽內的脂質以及輔助性T細胞抗原決定位可作為內部佐劑,因此當將該脂化胜肽做成疫苗時,該疫苗無須額外添加佐劑,就可以引起強烈的免疫反應。 In addition, the present invention has also developed a lipidated peptide, which is composed of the above-mentioned phosphorylated peptide, a lipid, and a helper T cell epitope, wherein the above-mentioned three are all combined with an amine Base acid to connect. The lipidated peptide can also induce a cytotoxic reaction against tumor cells expressing the target antigen, and achieve the effect of inhibiting tumors. At the same time, since the lipids and helper T cell epitopes in the lipidated peptide can be used as internal adjuvants, when the lipidated peptide is made into a vaccine, the vaccine does not require additional adjuvants, which can cause intense Immune response.

如本文所用的術語「一」或「一個」是描述本發明的元件和成分。該術語僅用於方便並提供本發明的基本概念。此描述應被理解為包含一個或至少一個,且除非上下文另外明確指出,否則單數術語應包含複數,且複數術語包含單數。當與申請專利範圍中的「包含」一詞一起使用時,術語「一」或「一個」可以表示一個或多於一個。 The term "a" or "an" as used herein describes the elements and ingredients of the present invention. This term is only used for convenience and to provide the basic concept of the invention. This description should be understood to include one or at least one, and unless the context clearly dictates otherwise, singular terms shall include pluralities, and plural terms shall include the singular. When used with the word "including" in the scope of the patent application, the term "a" or "an" can mean one or more than one.

本文使用的術語「或」可以表示「及/或」。 The term "or" used herein can mean "and/or".

本發明提供一種胜肽,包含由Lys-X-X-Ser-Val-Glu-Thr-Asp-X(SEQ ID NO:9)所組成的胺基酸序列,其中X是白胺酸(Leu)或異白胺酸(Ile),且該絲胺酸(Ser)被磷酸化。 The present invention provides a peptide comprising an amino acid sequence consisting of Lys-XX-Ser-Val-Glu-Thr-Asp-X (SEQ ID NO: 9), wherein X is leucine (Leu) or iso Leucine (Ile), and the serine (Ser) is phosphorylated.

在一具體實施例中,該胜肽是一磷酸化胜肽(phosphopeptide)。在另一具體實施例中,該胺基酸序列為SEQ ID NO:6,其中SEQ ID NO:6的序列上第4個位置的胺基酸(Ser)(N端的第四個殘 基)被磷酸化。 In a specific embodiment, the peptide is a phosphopeptide. In another specific embodiment, the amino acid sequence is SEQ ID NO: 6, wherein the amino acid (Ser) at the fourth position in the sequence of SEQ ID NO: 6 (the fourth residue at the N terminal) is Phosphorylation.

本發明的胜肽為人類白血球抗原(HLA)限制性胜肽。HLA為人類特異的主要組織相容性複合體(Major Histocompatibility Complex Class I,MHC)抗原。MHC包含第1類MHC(MHC class I)、第2類MHC(MHC class II)以及第3類MHC(MHC class III)。當一胜肽具有合適的結合基序(binding motifs)的話,第1類MHC分子能夠結合該胜肽,並會將該胜肽呈現給細胞毒性T淋巴細胞。於一具體實施例中,該第1類MHC的該HLA包含HLA-A、HLA-B和HLA-C。於一較佳具體實施例中,該第1類MHC的該HLA為HLA-A。 The peptide of the present invention is a human leukocyte antigen (HLA) restricted peptide. HLA is a human-specific major histocompatibility complex (Major Histocompatibility Complex Class I, MHC) antigen. MHC includes Class 1 MHC (MHC class I), Class 2 MHC (MHC class II), and Class 3 MHC (MHC class III). When a peptide has suitable binding motifs, the Class 1 MHC molecule can bind to the peptide and present the peptide to cytotoxic T lymphocytes. In a specific embodiment, the HLA of the MHC class 1 includes HLA-A, HLA-B, and HLA-C. In a preferred embodiment, the HLA of the MHC type 1 is HLA-A.

於另一具體實施例中,該HLA-A包含HLA-A1、HLA-A2、HLA-A3、HLA-A9、HLA-A10、HLA-A11、HLA-Aw19、HLA-A23、HLA-A24、HLA-A25、HLA-A26、HLA-A28、HLA-A29、HLA-A30、HLA-A31、HLA-A32、HLA-Aw33、HLA-Aw34、HLA-Aw36、HLA-Aw43、HLA-Aw66、HLA-Aw6和HLA-A69。於一較佳具體實施例中,該HLA為HLA-A1、HLA-A2、HLA-A3、HLA-A11或HLA-A24。於一更佳具體實施例中,該HLA為HLA-A2。於另一具體實施例中,該胜肽為HLA限制性胜肽(HLA-restricted peptide)。於一較佳具體實施例中,該胜肽為HLA-A限制性胜肽。於一更佳具體實施例中,該胜肽為HLA-A2限制性胜肽。 In another specific embodiment, the HLA-A comprises HLA-A1, HLA-A2, HLA-A3, HLA-A9, HLA-A10, HLA-A11, HLA-Aw19, HLA-A23, HLA-A24, HLA -A25, HLA-A26, HLA-A28, HLA-A29, HLA-A30, HLA-A31, HLA-A32, HLA-Aw33, HLA-Aw34, HLA-Aw36, HLA-Aw43, HLA-Aw66, HLA-Aw6 And HLA-A69. In a preferred embodiment, the HLA is HLA-A1, HLA-A2, HLA-A3, HLA-A11 or HLA-A24. In a more preferred embodiment, the HLA is HLA-A2. In another specific embodiment, the peptide is an HLA-restricted peptide. In a preferred embodiment, the peptide is an HLA-A restricted peptide. In a more preferred embodiment, the peptide is an HLA-A2 restricted peptide.

因此,該胜肽會與HLA(例如HLA-A2)結合形成一HLA/胜肽複合體,而免疫細胞會辨識該HLA/胜肽複合體,進而誘發免疫反應。在一具體實施例中,該胜肽是一免疫原性胜肽(immunogenic peptide)。 Therefore, the peptide will combine with HLA (such as HLA-A2) to form an HLA/peptide complex, and immune cells will recognize the HLA/peptide complex and induce an immune response. In a specific embodiment, the peptide is an immunogenic peptide.

目前已知腫瘤壞死因子受體相關蛋白1(TRAP1)在癌細胞上高度表現,特別是在肺癌中。因此,TRAP1是腫瘤特異性抗原(tumor specific antigen)。是以,該胜肽是基於來自腫瘤壞死因子受體相關蛋白1(TRAP1)的T細胞抗原決定位的胺基酸序列所設計的。在一具體實施例中,該胜肽為一衍生自TRAP1的T細胞抗原決定位胜肽(TRAP1-derived T cell epitope peptide)。在一較佳具體實施例中,該胜肽為一衍生自TRAP1的T細胞磷酸化抗原決定位胜肽(TRAP1-derived T cell phosphorylated epitope peptide)。在另一具體實施例中,該胜肽為一細胞毒性T細胞抗原決定位胜肽(cytotoxic T cell epitope peptide)。在一較佳具體實施例中,該胜肽為一細胞毒性T細胞磷酸化抗原決定位胜肽(cytotoxic T cell phosphorylated epitope peptide)。故本發明的胜肽能夠對表現TRAP1的細胞誘發有效及專一性的免疫反應。於另一具體實施例中,該胜肽誘發免疫反應對抗表現TRAP1的細胞。進一步,該胜肽誘發分泌干擾素-γ(IFN-γ)的T細胞(例如CTL)的產生以對抗表現TRAP1的細胞,例如癌細胞。因此,該胜肽可誘發CTL反應以對抗表現TRAP1的腫瘤細胞。於一較佳具體實施例中,該胜肽誘發CTL反應以治療由表現TRAP1的癌細胞所引起的癌症。 It is currently known that tumor necrosis factor receptor related protein 1 (TRAP1) is highly expressed on cancer cells, especially in lung cancer. Therefore, TRAP1 is a tumor specific antigen. Therefore, the peptide is designed based on the amino acid sequence of the T cell epitope derived from tumor necrosis factor receptor-related protein 1 (TRAP1). In a specific embodiment, the peptide is a T cell epitope peptide derived from TRAP1 (TRAP1-derived T cell epitope peptide). In a preferred embodiment, the peptide is a TRAP1-derived T cell phosphorylated epitope peptide (TRAP1-derived T cell phosphorylated epitope peptide). In another specific embodiment, the peptide is a cytotoxic T cell epitope peptide. In a preferred embodiment, the peptide is a cytotoxic T cell phosphorylated epitope peptide. Therefore, the peptide of the present invention can induce an effective and specific immune response to cells expressing TRAP1. In another embodiment, the peptide induces an immune response against cells expressing TRAP1. Further, the peptide induces the production of T cells (such as CTL) that secrete interferon-γ (IFN-γ) to combat cells expressing TRAP1, such as cancer cells. Therefore, the peptide can induce a CTL response against tumor cells expressing TRAP1. In a preferred embodiment, the peptide induces a CTL response to treat cancer caused by cancer cells expressing TRAP1.

本發明還提供一種組合物,包含一胜肽,其中該胜肽包含由Lys-X-X-Ser-Val-Glu-Thr-Asp-X(SEQ ID NO:9)所組成的胺基酸序列,其中X是白胺酸(Leu)或異白胺酸(Ile),且該絲胺酸(Ser)被磷酸化。 The present invention also provides a composition comprising a peptide, wherein the peptide comprises an amino acid sequence consisting of Lys-XX-Ser-Val-Glu-Thr-Asp-X (SEQ ID NO: 9), wherein X is leucine (Leu) or isoleucine (Ile), and the serine (Ser) is phosphorylated.

在一具體實施例中,該胜肽是一磷酸化胜肽 (phosphopeptide)。在另一具體實施例中,該胺基酸序列為SEQ ID NO:6,其中SEQ ID NO:6的序列上第4個位置的胺基酸(Ser)(N端的第四個殘基)被磷酸化。 In a specific embodiment, the peptide is a phosphopeptide. In another specific embodiment, the amino acid sequence is SEQ ID NO: 6, wherein the amino acid (Ser) at the fourth position in the sequence of SEQ ID NO: 6 (the fourth residue at the N terminal) is Phosphorylation.

在一具體實施例中,該組合物為一醫藥組合物。該醫藥組合物可任選地包括載體,例如醫藥上可接受的載體。在一較佳具體實施例中,該醫藥組合物包含一醫藥上可接受的載體。該醫藥上可接受的載體是由所施予的特定組合物以及用於施予組合物的特定方法來決定。因此,存在許多醫藥組合物的合適製劑。適於胃腸外給藥的製劑可配製成,例如,用於靜脈內,肌肉內,皮內,腹膜內和皮下途徑。該載體可以包含水性等滲透壓無菌注射溶液,其可以含有抗氧化劑、緩衝劑、抑菌劑和溶質,使得製劑與預期接受者的血液等滲透壓;以及水性和非水性無菌懸浮液,其可以包括懸浮劑、增溶劑、增稠劑、藥劑、穩定劑、防腐劑、脂質體、微球和乳劑。術語「醫藥上可接受的」是指可以給予哺乳動物而沒有過度毒性的化合物和組合物。術語「醫藥上可接受的載體」不包括組織培養基。 In a specific embodiment, the composition is a pharmaceutical composition. The pharmaceutical composition may optionally include a carrier, such as a pharmaceutically acceptable carrier. In a preferred embodiment, the pharmaceutical composition includes a pharmaceutically acceptable carrier. The pharmaceutically acceptable carrier is determined by the specific composition to be administered and the specific method used to administer the composition. Therefore, there are many suitable formulations of pharmaceutical compositions. Formulations suitable for parenteral administration can be formulated, for example, for intravenous, intramuscular, intradermal, intraperitoneal and subcutaneous routes. The carrier may contain an aqueous isotonic sterile injection solution, which may contain antioxidants, buffers, bacteriostatic agents and solutes, so that the preparation is isotonic with the blood of the intended recipient; and aqueous and non-aqueous sterile suspensions, which may Including suspending agents, solubilizers, thickening agents, pharmaceuticals, stabilizers, preservatives, liposomes, microspheres and emulsions. The term "pharmaceutically acceptable" refers to compounds and compositions that can be administered to mammals without excessive toxicity. The term "pharmaceutically acceptable carrier" does not include tissue culture medium.

在一具體實施例中,該組合物可以為能夠對癌症細胞引發免疫反應的免疫原性組合物或疫苗。在一較佳具體實施例中,該組合物為一疫苗。如本文所用,術語「免疫原性組合物或疫苗」是指引發針對癌細胞的至少一種類型的免疫反應的組合物。因此,這種免疫反應可以是任何類型,例如細胞毒性T淋巴細胞(CTL)反應,CTL能夠識別抗原呈現細胞(antigen presenting cell,APC)的表面上所呈現的HLA/胜肽複合體,進而導致細胞溶解,也就是疫苗能在接種的受試者體內引發產生效應T細胞 (effector T cells),其對癌細胞具有細胞毒性作用。 In a specific embodiment, the composition may be an immunogenic composition or vaccine capable of eliciting an immune response to cancer cells. In a preferred embodiment, the composition is a vaccine. As used herein, the term "immunogenic composition or vaccine" refers to a composition that elicits at least one type of immune response against cancer cells. Therefore, this immune response can be of any type, such as a cytotoxic T lymphocyte (CTL) response. CTL can recognize the HLA/peptide complex presented on the surface of antigen presenting cells (APC), which leads to Cell lysis, that is, the vaccine can trigger the production of effector T cells (effector T cells) in the vaccinated subject, which has a cytotoxic effect on cancer cells.

由於本發明的胜肽是相對小的分子,在這樣的組合物中可能需要將胜肽與各種材料(如佐劑)組合以產生疫苗或免疫原性組合物等。佐劑就廣泛定義來說是能促進免疫反應的物質。通常,所選擇的佐劑選自完全弗氏佐劑、不完全弗氏佐劑、明礬、載體病毒、高分子量多醣、糖蛋白、微粒、脂質體、脂質及其組合。當感興趣的抗原為低分子量或免疫原性差時,建議與免疫原性載體偶合。這種免疫原性載體分子的具體實施例包括匙孔血藍蛋白(keyhole limpet haemocyanin)、牛血清白蛋白、卵清蛋白(ovalbumin)和禽免疫球蛋白(fowl immunoglobulin)。各種皂素(saponin)提取物也被提出可用作免疫原性組合物中的佐劑。最近,已經提出使用顆粒性白血球(granulocyte)-巨噬細胞集落刺激因子(GM-CSF),一種眾所皆知的細胞因子,可以作為佐劑(WO 97/28816)。在一具體實施例中,該組合物包含一佐劑。 Since the peptides of the present invention are relatively small molecules, it may be necessary to combine the peptides with various materials (such as adjuvants) in such compositions to produce vaccines or immunogenic compositions, etc. Adjuvants are broadly defined as substances that can promote an immune response. Generally, the selected adjuvant is selected from complete Freund's adjuvant, incomplete Freund's adjuvant, alum, vector virus, high molecular weight polysaccharide, glycoprotein, microparticle, liposome, lipid, and combinations thereof. When the antigen of interest is of low molecular weight or poor immunogenicity, it is recommended to couple with an immunogenic carrier. Specific examples of such immunogenic carrier molecules include keyhole limpet haemocyanin, bovine serum albumin, ovalbumin and fowl immunoglobulin. Various saponin extracts have also been proposed as adjuvants in immunogenic compositions. Recently, it has been proposed to use granulocyte-macrophage colony stimulating factor (GM-CSF), a well-known cytokine, as an adjuvant (WO 97/28816). In a specific embodiment, the composition includes an adjuvant.

於一具體實施例中,該胜肽為HLA限制性胜肽。於一較佳具體實施例中,該胜肽為HLA-A限制性胜肽。於一更佳具體實施例中,該胜肽為HLA-A2限制性胜肽。 In a specific embodiment, the peptide is an HLA restricted peptide. In a preferred embodiment, the peptide is an HLA-A restricted peptide. In a more preferred embodiment, the peptide is an HLA-A2 restricted peptide.

由於該胜肽為衍生自TRAP1的T細胞抗原決定位胜肽,該胜肽與一抗原呈現細胞上的HLA分子結合後,讓T細胞進行辨識並誘發CTL反應以使表現TRAP1的細胞(如癌細胞)發生細胞溶解。於另一具體實施例中,該胜肽誘發免疫反應對抗表現TRAP1的細胞。於一較佳具體實施例中,該免疫反應包含CTL反應。因此,包含該胜肽的組合物具有誘發 細胞毒性T淋巴細胞的反應的能力,可用於治療表現TRAP1的癌細胞。於一更佳具體實施例中,該胜肽誘發CTL反應以對抗表現TRAP1的癌細胞。 Since the peptide is a T cell epitope peptide derived from TRAP1, after the peptide binds to an HLA molecule on an antigen-presenting cell, it allows T cells to recognize and induce a CTL response to enable cells expressing TRAP1 (such as cancer Cell) cell lysis occurs. In another embodiment, the peptide induces an immune response against cells expressing TRAP1. In a preferred embodiment, the immune response includes a CTL response. Therefore, the composition containing the peptide has the ability to induce the response of cytotoxic T lymphocytes, and can be used to treat cancer cells expressing TRAP1. In a more preferred embodiment, the peptide induces a CTL response against cancer cells expressing TRAP1.

本發明進一步提供一種組合物用於製備治療一個體上的癌症的藥物的用途,其中該組合物包含一有效劑量的胜肽,其中該胜肽包含由Lys-X-X-Ser-Val-Glu-Thr-Asp-X(SEQ ID NO:9)所組成的胺基酸序列,其中X是白胺酸(Leu)或異白胺酸(Ile),且該絲胺酸(Ser)被磷酸化。 The present invention further provides a composition for the preparation of a medicament for the treatment of cancer in a body, wherein the composition comprises an effective dose of peptide, wherein the peptide comprises Lys-XX-Ser-Val-Glu-Thr -An amino acid sequence composed of Asp-X (SEQ ID NO: 9), where X is leucine (Leu) or isoleucine (Ile), and the serine (Ser) is phosphorylated.

在一具體實施例中,該胜肽是一磷酸化胜肽(phosphopeptide)。在另一具體實施例中,該胺基酸序列為SEQ ID NO:6,其中SEQ ID NO:6的序列上第4個位置的胺基酸(Ser)(N端的第四個殘基)被磷酸化。 In a specific embodiment, the peptide is a phosphopeptide. In another specific embodiment, the amino acid sequence is SEQ ID NO: 6, wherein the amino acid (Ser) at the fourth position in the sequence of SEQ ID NO: 6 (the fourth residue at the N terminal) is Phosphorylation.

於另一具體實施例中,該胜肽為HLA限制性胜肽。於一較佳具體實施例中,該胜肽為HLA-A限制性胜肽。於一更佳具體實施例中,該胜肽為HLA-A2限制性胜肽。因此,該胜肽會與一抗原呈現細胞(APC)(例如B淋巴球、巨噬細胞及樹突細胞)上的HLA-A分子結合成一HLA-A/胜肽複合體,以讓T細胞辨識,並活化T細胞。故該個體為一體內具有HLA-A2的個體,以讓該包含該胜肽的藥物施予進該個體體內後,該胜肽能與HLA-A2分子結合而活化T細胞。於另一具體實施例中,該個體為具有HLA分子為HLA-A的個體。於一較佳具體實施例中,該個體為具有HLA分子為HLA-A2的個體。 In another embodiment, the peptide is an HLA restricted peptide. In a preferred embodiment, the peptide is an HLA-A restricted peptide. In a more preferred embodiment, the peptide is an HLA-A2 restricted peptide. Therefore, the peptide will combine with HLA-A molecules on an antigen presenting cell (APC) (such as B lymphocytes, macrophages, and dendritic cells) to form an HLA-A/peptide complex for T cells to recognize , And activate T cells. Therefore, the individual is an individual with HLA-A2 in one body, so that after the drug containing the peptide is administered into the individual, the peptide can bind to the HLA-A2 molecule to activate T cells. In another specific embodiment, the individual is an individual with an HLA molecule of HLA-A. In a preferred embodiment, the individual is an individual with an HLA molecule HLA-A2.

於一具體實施例中,該個體是一動物,較佳為一哺乳動物,更佳為人類。 In a specific embodiment, the individual is an animal, preferably a mammal, and more preferably a human.

該胜肽是基於來自腫瘤壞死因子受體相關蛋白1(TRAP1)的T細胞抗原決定位的胺基酸序列所設計的。因此,該胜肽可以誘發免疫細胞產生免疫反應去對抗表現TRAP1的細胞。於一具體實施例中,該免疫細胞包含第1型輔助性T細胞(type I T helper cell,Th1)、細胞毒性T淋巴細胞(CTL)、有能力誘發Th1細胞之抗原呈現細胞(APC)、及有能力誘發CTL之APC。於一較佳具體實施例中,該免疫細胞包含第1型輔助性T細胞(Th1)以及細胞毒性T淋巴細胞(CTL)。於一更佳具體實施例中,該細胞毒性T淋巴細胞為CD8+ T細胞。因此,在另一具體實施例中,該胜肽為一細胞毒性T細胞抗原決定位胜肽。在一較佳具體實施例中,該胜肽為一細胞毒性T細胞磷酸化抗原決定位胜肽。 The peptide is designed based on the amino acid sequence of the T cell epitope derived from tumor necrosis factor receptor related protein 1 (TRAP1). Therefore, the peptide can induce immune cells to produce an immune response against cells expressing TRAP1. In a specific embodiment, the immune cells include type IT helper cells (Th1), cytotoxic T lymphocytes (CTL), antigen presenting cells (APC) capable of inducing Th1 cells, and APC capable of inducing CTL. In a preferred embodiment, the immune cells include type 1 helper T cells (Th1) and cytotoxic T lymphocytes (CTL). In a more preferred embodiment, the cytotoxic T lymphocytes are CD8 + T cells. Therefore, in another embodiment, the peptide is a cytotoxic T cell epitope peptide. In a preferred embodiment, the peptide is a cytotoxic T cell phosphorylated epitope peptide.

如本文所用的術語「癌症」是指其中細胞群在不同程度上對通常控制細胞增殖和分化的控制機制無反應的病症。癌症是指各種類型的惡性腫瘤和腫瘤,包括原發性腫瘤和腫瘤轉移。於一具體實施例中,該癌症是由表現TRAP1的癌細胞所引起的癌症。於另一具體實施例中,該癌症包括肺癌、頭頸癌(head and neck cancer)、乳癌(breast cancer)、胰臟癌(pancreatic cancer)、淋巴瘤、骨髓瘤、白血病、腎癌、卵巢癌、骨癌、肝癌、前列腺癌、皮膚癌、大腸癌(colon cancer)和甲狀腺癌。於一較佳具體實施例中,該癌症為肺癌、乳癌、卵巢癌、大腸癌或前列腺癌。於一更佳具體實施例,該癌症是肺癌。 The term "cancer" as used herein refers to a condition in which cell populations do not respond to varying degrees of control mechanisms that normally control cell proliferation and differentiation. Cancer refers to various types of malignant tumors and tumors, including primary tumors and tumor metastases. In a specific embodiment, the cancer is cancer caused by cancer cells expressing TRAP1. In another specific embodiment, the cancer includes lung cancer, head and neck cancer, breast cancer, pancreatic cancer, lymphoma, myeloma, leukemia, kidney cancer, ovarian cancer, Bone cancer, liver cancer, prostate cancer, skin cancer, colon cancer and thyroid cancer. In a preferred embodiment, the cancer is lung cancer, breast cancer, ovarian cancer, colorectal cancer or prostate cancer. In a more preferred embodiment, the cancer is lung cancer.

如本文所用,術語「治療」是指治療性治療,其能幫該個體逆轉、減輕、改善、抑制、減緩或停止與疾病或病症相關的病症的病程或 嚴重性,例如癌症。術語「治療」包括減少或減輕與癌症相關的情況、疾病或病症的至少一種不良作用或症狀。如果一種或多種症狀或臨床標誌物減少,該治療通常是有效的。或者,如果疾病的病程減少或停止,則該治療是有效的。也就是說,「治療」不僅包括症狀或標誌物的改善,還包括與沒有治療時的預期相比,症狀進展或惡化的停止或至少減緩。有益或期望的臨床結果包括但不限於減輕一種或多種症狀、減輕疾病程度、穩定(即不惡化)疾病狀態、延遲或減緩疾病進展、改善或緩解疾病狀態、緩解(無論是部分還是全部)、減少干預措施、縮短住院時間和/或降低死亡率,無論是可檢測的還是不可檢測的。術語疾病的「治療」還包括緩解疾病的症狀或副作用(包括姑息療法(palliative treatment))。 As used herein, the term "treatment" refers to a therapeutic treatment that can help the individual reverse, reduce, ameliorate, inhibit, slow down, or stop the course or severity of the disease or condition associated with the disease, such as cancer. The term "treatment" includes reducing or alleviating at least one adverse effect or symptom of a condition, disease or condition associated with cancer. If one or more symptoms or clinical markers are reduced, the treatment is usually effective. Alternatively, if the course of the disease is reduced or stopped, the treatment is effective. In other words, "treatment" includes not only the improvement of symptoms or markers, but also the cessation or at least slowing down of the progression or deterioration of symptoms compared to expectations without treatment. Beneficial or desired clinical results include, but are not limited to, alleviation of one or more symptoms, reduction of disease severity, stabilization (i.e. not worsening) of disease state, delay or slowing down of disease progression, improvement or alleviation of disease state, alleviation (whether partial or full), Reduce interventions, shorten hospital stays and/or reduce mortality, whether detectable or undetectable. The term "treatment" of a disease also includes alleviation of symptoms or side effects of the disease (including palliative treatment).

本文使用的術語「有效劑量」是指一治療劑量,其可以預防,減少、停止或逆轉在特定條件下已在該個體中發展的症狀;或者部分地、完全緩解當該個體於開始接受治療時已在特定條件下所存在的症狀。 The term "effective dose" as used herein refers to a therapeutic dose that can prevent, reduce, stop, or reverse the symptoms that have developed in the individual under certain conditions; or partially or completely relieve the individual when the individual begins to receive treatment Symptoms that already exist under certain conditions.

於一具體實施例中,該胜肽的有效劑量範圍為0.1mg/公斤體重至10mg/公斤體重。於一較佳具體實施例中,該胜肽的有效劑量範圍為0.5mg/公斤體重至4mg/公斤體重。於一更佳具體實施例中,該胜肽的有效劑量範圍為1.5mg/公斤體重至2mg/公斤體重。 In a specific embodiment, the effective dose of the peptide ranges from 0.1 mg/kg body weight to 10 mg/kg body weight. In a preferred embodiment, the effective dose of the peptide ranges from 0.5 mg/kg body weight to 4 mg/kg body weight. In a more preferred embodiment, the effective dose of the peptide ranges from 1.5 mg/kg body weight to 2 mg/kg body weight.

因此,包含該胜肽的藥物進入該個體體內後,會與一抗原呈現細胞上的HLA-A分子結合形成一HLA-A/胜肽複合體,以活化能分泌IFN-γ的T細胞(例如Th1和CTL),來抑制表現TRAP1的腫瘤細胞生長,進而治療癌症。於一具體實施例中,該胜肽具有誘發T細胞的免疫反應的 能力,以抑制癌細胞。於一較佳具體實施例中,該胜肽具有誘發T細胞的免疫反應的能力,以治療癌症。於一更佳具體實施例中,該胜肽具有誘發分泌IFN-γ的T細胞的免疫反應的能力,以治療癌症。 Therefore, after the drug containing the peptide enters the body of the individual, it will combine with the HLA-A molecule on an antigen-presenting cell to form an HLA-A/peptide complex to activate T cells that can secrete IFN-γ (such as Th1 and CTL) to inhibit the growth of tumor cells expressing TRAP1, thereby treating cancer. In a specific embodiment, the peptide has the ability to induce the immune response of T cells to inhibit cancer cells. In a preferred embodiment, the peptide has the ability to induce the immune response of T cells to treat cancer. In a more preferred embodiment, the peptide has the ability to induce the immune response of T cells secreting IFN-γ to treat cancer.

於另一具體實施例中,該T細胞或是該分泌IFN-γ的T細胞包含第1型輔助性T細胞(Th1)以及細胞毒性T淋巴細胞(CTL)。於一較佳具體實施例中,該細胞毒性T淋巴細胞為CD8+ T細胞。 In another specific embodiment, the T cell or the IFN-γ-secreting T cell includes type 1 helper T cells (Th1) and cytotoxic T lymphocytes (CTL). In a preferred embodiment, the cytotoxic T lymphocytes are CD8 + T cells.

是以,該藥物的劑型可以為一疫苗;該疫苗包含該胜肽以及一佐劑,其中該佐劑能提高免疫原性或促進免疫反應。該疫苗能對表現TRAP1的細胞誘發CTL反應以治療因表現TRAP1的細胞所引起的疾病或癌症。 Therefore, the dosage form of the drug can be a vaccine; the vaccine includes the peptide and an adjuvant, wherein the adjuvant can improve immunogenicity or promote immune response. The vaccine can induce CTL responses to cells expressing TRAP1 to treat diseases or cancers caused by cells expressing TRAP1.

本發明另外提供一種脂化胜肽(lipopeptide),包含一脂質、一輔助性T細胞抗原決定位(T helper cell epitope)以及一胜肽,其中該脂質、該輔助性T細胞抗原決定位以及該胜肽三者並不互相連接,但三者皆與一胺基酸進行連接,其中該胜肽包含由Lys-X-X-Ser-Val-Glu-Thr-Asp-X(SEQ ID NO:9)所組成的胺基酸序列,其中X是白胺酸(Leu)或異白胺酸(Ile),且該絲胺酸(Ser)被磷酸化。 The present invention further provides a lipidated peptide (lipopeptide), comprising a lipid, a T helper cell epitope and a peptide, wherein the lipid, the T helper cell epitope and the The three peptides are not connected to each other, but all three are connected to an amino acid, wherein the peptide contains Lys-XX-Ser-Val-Glu-Thr-Asp-X (SEQ ID NO: 9) The composition of the amino acid sequence, where X is leucine (Leu) or isoleucine (Ile), and the serine (Ser) is phosphorylated.

於一具體實施例,該脂化胜肽的結構如下:

Figure 107133150-A0101-12-0012-1
In a specific embodiment, the structure of the lipidated peptide is as follows:
Figure 107133150-A0101-12-0012-1

其中W為該輔助性T細胞抗原決定位;Y為該胜肽;Z為該脂質;以及A為該胺基酸。W、Y和Z並不相互連接。此外,該結構中的W、Y和Z的位置可以互換,其並不影響該脂化胜肽的功效。 Wherein W is the helper T cell epitope; Y is the peptide; Z is the lipid; and A is the amino acid. W, Y, and Z are not connected to each other. In addition, the positions of W, Y and Z in the structure can be interchanged, which does not affect the efficacy of the lipidated peptide.

在一具體實施例中,該胜肽是一磷酸化胜肽。在一較佳具體實施例中,該胜肽的胺基酸序列為SEQ ID NO:6,其中SEQ ID NO:6的序列上第4個位置的胺基酸(Ser)(N端的第四個殘基)被磷酸化。 In a specific embodiment, the peptide is a phosphorylated peptide. In a preferred embodiment, the amino acid sequence of the peptide is SEQ ID NO: 6, wherein the amino acid (Ser) at the fourth position in the sequence of SEQ ID NO: 6 (the fourth at the N-terminus) Residues) are phosphorylated.

該脂質的功能為作為類鐸受體(toll-like receptor,TLR)的配體(ligand),以觸發類鐸受體路徑,進而活化免疫細胞的反應,例如促進樹突細胞(dendritic cell,DC)成熟,以及增強Th1-偏向免疫反應(Th1-biased immune response)以促發CTL。在一具體實施例中,該脂質具有觸發類鐸受體路徑的功能。在一較佳具體實施例中,該類鐸受體(TLR)包含TLR2、TLR4,TLR5和TLR9。在一更佳具體實施例中,該類鐸受體為類鐸受體2(TLR2)。 The function of this lipid is to act as a ligand for toll-like receptor (TLR) to trigger the toll-like receptor pathway, thereby activating the response of immune cells, such as promoting dendritic cell (DC) ) Maturity, and enhance Th1-biased immune response (Th1-biased immune response) to promote CTL. In a specific embodiment, the lipid has the function of triggering the toll-like receptor pathway. In a preferred embodiment, the toll-like receptor (TLR) includes TLR2, TLR4, TLR5 and TLR9. In a more preferred embodiment, the toll-like receptor is toll-like receptor 2 (TLR2).

在另一具體實施例中,該脂質包含一脂肪酸。在一較佳具體實施例中,該脂肪酸包含一不飽和脂肪酸和一飽和脂肪酸。在一更佳具體實施例中,該飽和脂肪酸包含一棕櫚酸。因此,該胺基酸的側鏈可與兩個或三個棕櫚酸接合。在另一具體實施例中,該棕櫚酸為Cys((RS)-2,3-(棕櫚醯基氧基)-丙基)-OH(Cys((RS)-2,3-di(palmitoyloxy)-propyl)-OH);或N-α-棕櫚醯基-S-[2,3-雙(棕櫚醯基氧基)-2RS]-丙基]-L-半胱胺酸(N-α-Palmitoyl-S-[2,3-bis(palmitoyloxy)-(2RS)-propyl]-L-cysteine)。 In another specific embodiment, the lipid comprises a fatty acid. In a preferred embodiment, the fatty acid comprises an unsaturated fatty acid and a saturated fatty acid. In a more preferred embodiment, the saturated fatty acid includes palmitic acid. Therefore, the side chain of the amino acid can be joined with two or three palmitic acids. In another specific embodiment, the palmitic acid is Cys((RS)-2,3-(palmitoyloxy)-propyl)-OH(Cys((RS)-2,3-di(palmitoyloxy) -propyl)-OH); or N-α-palmitoyl-S-[2,3-bis(palmitoyloxy)-2RS]-propyl]-L-cysteine (N-α- Palmitoyl-S-[2,3-bis(palmitoyloxy)-(2RS)-propyl]-L-cysteine).

該輔助性T細胞抗原決定位的功能為誘發輔助性T細胞(T helper cell)的免疫反應。在一具體實施例中,該輔助性T細胞抗原決定位具有誘發輔助性T細胞的免疫反應的功能。在一較佳具體實施例中,該輔助性T細胞抗原決定位的序列包含一SEQ ID NO:5的胺基酸序列。 The function of the T helper cell epitope is to induce the immune response of T helper cells. In a specific embodiment, the helper T cell epitope has the function of inducing the immune response of the helper T cell. In a preferred embodiment, the sequence of the helper T cell epitope includes an amino acid sequence of SEQ ID NO:5.

該輔助性T細胞抗原決定位為一第2類MHC限制性胜肽。因此,該輔助性T細胞抗原決定位能與第2類MHC分子。當一胜肽具有合適的結合基序(binding motifs)的話,第2類MHC分子能夠結合該胜肽,並會將該胜肽呈現給輔助性T細胞。於一具體實施例中,該第2類MHC的該HLA包含HLA-DP、HLA-DM、HLA-DOA、HLA-DOB、HLA-DQ以及HLA-DR。於一較佳具體實施例中,該第2類MHC的該HLA為HLA-DR。於一更佳具體實施例中,該輔助性T細胞抗原決定位為HLA-DR限制性胜肽(HLA-DR-restricted peptide)。是以,該輔助性T細胞抗原決定位能與抗原呈現細胞上的HLA-DR分子結合形成一HLA-DR/輔助性T細胞抗原決定位的複合體,讓輔助性T細胞辨識,進而活化輔助性T細胞。 The helper T cell epitope is a class 2 MHC restricted peptide. Therefore, the helper T cell epitope can be related to the second MHC molecule. When a peptide has suitable binding motifs, the second type of MHC molecule can bind to the peptide and present the peptide to helper T cells. In a specific embodiment, the HLA of the Type 2 MHC includes HLA-DP, HLA-DM, HLA-DOA, HLA-DOB, HLA-DQ, and HLA-DR. In a preferred embodiment, the HLA of the second MHC is HLA-DR. In a more preferred embodiment, the helper T cell epitope is an HLA-DR-restricted peptide. Therefore, the helper T cell epitope can combine with the HLA-DR molecule on the antigen presenting cell to form an HLA-DR/helper T cell epitope complex, allowing the helper T cell to recognize and activate the helper Sex T cells.

「主要組織相容性複合體(MHC)」、「MHC分子」、「HLA」或「HLA分子」應理解為特別是能夠與一胜肽結合的蛋白質,其中該胜肽為將蛋白質抗原進行蛋白水解切割所產生的胜肽,且該胜肽會表現潛在的T細胞抗原決定位,該胜肽會被運輸到細胞表面並將該胜肽呈現給特定細胞,特別是細胞毒性T淋巴細胞或輔助性T細胞。 "Major histocompatibility complex (MHC)", "MHC molecule", "HLA" or "HLA molecule" should be understood as particularly a protein capable of binding to a peptide, wherein the peptide is a protein antigen. The peptide produced by hydrolytic cleavage, and the peptide will exhibit potential T cell epitopes, the peptide will be transported to the cell surface and the peptide will be presented to specific cells, especially cytotoxic T lymphocytes or helper Sex T cells.

該胺基酸與該脂質、該輔助性T細胞抗原決定位以及該胜肽相互連接。因該胺基酸的側鏈具有活性的官能基(例如OH或COOH),故可與脂質相接。在一具體實施例中,該胺基酸為一側鏈具有活性的官能 基的胺基酸。在一較佳具體實施例中,該胺基酸為賴胺酸(lysine)。在另一具體實施例中,該活性的官能基為OH基或COOH基。 The amino acid is connected to the lipid, the helper T cell epitope and the peptide. Since the side chain of the amino acid has an active functional group (for example, OH or COOH), it can be connected to lipids. In a specific embodiment, the amino acid is an amino acid with a reactive functional group on one side chain. In a preferred embodiment, the amino acid is lysine. In another specific embodiment, the active functional group is an OH group or a COOH group.

於另一具體實施例中,該胜肽為HLA限制性胜肽。於一較佳具體實施例中,該胜肽為HLA-A限制性胜肽。於一更佳具體實施例中,該胜肽為HLA-A2限制性胜肽。因此,含有該胜肽的脂化胜肽會與一抗原呈現細胞(APC)上的HLA-A分子(例如HLA-A2)結合成一HLA-A/胜肽複合體,進而活化T細胞。於一具體實施例中,該脂化胜肽為一免疫原性胜肽。 In another embodiment, the peptide is an HLA restricted peptide. In a preferred embodiment, the peptide is an HLA-A restricted peptide. In a more preferred embodiment, the peptide is an HLA-A2 restricted peptide. Therefore, the lipidated peptide containing the peptide will combine with the HLA-A molecule (such as HLA-A2) on an antigen presenting cell (APC) to form an HLA-A/peptide complex, thereby activating T cells. In a specific embodiment, the lipidated peptide is an immunogenic peptide.

該胜肽是基於來自腫瘤壞死因子受體相關蛋白1(TRAP1)的T細胞抗原決定位的胺基酸序列所設計的。在一具體實施例中,該胜肽為一衍生自TRAP1的T細胞抗原決定位胜肽。在一較佳具體實施例中,該胜肽為一衍生自TRAP1的T細胞磷酸化抗原決定位胜肽。在另一具體實施例中,該胜肽為一細胞毒性T細胞抗原決定位胜肽。在一較佳具體實施例中,該胜肽為一細胞毒性T細胞磷酸化抗原決定位胜肽。因此,該胜肽可以誘發免疫細胞產生免疫反應去對抗表現TRAP1的細胞。故該脂化胜肽會與抗原呈現細胞上的HLA分子結合形成一HLA/脂化胜肽的複合體,讓T細胞辨識,進而活化分泌IFN-γ的細胞以對抗表現TRAP1的細胞(例如癌細胞)。因此,該脂化胜肽可以作為一治療癌症的治療劑。在一具體實施例中,該分泌IFN-γ的細胞包含第1型輔助性T細胞(Th1)以及細胞毒性T淋巴細胞(CTL)。 The peptide is designed based on the amino acid sequence of the T cell epitope derived from tumor necrosis factor receptor related protein 1 (TRAP1). In a specific embodiment, the peptide is a T cell epitope peptide derived from TRAP1. In a preferred embodiment, the peptide is a T cell phosphorylated epitope peptide derived from TRAP1. In another specific embodiment, the peptide is a cytotoxic T cell epitope peptide. In a preferred embodiment, the peptide is a cytotoxic T cell phosphorylated epitope peptide. Therefore, the peptide can induce immune cells to produce an immune response against cells expressing TRAP1. Therefore, the lipidated peptide will combine with the HLA molecules on the antigen-presenting cell to form an HLA/lipidated peptide complex, allowing T cells to recognize it, and then activate the cells that secrete IFN-γ to fight against cells expressing TRAP1 (such as cancer). cell). Therefore, the lipidated peptide can be used as a therapeutic agent for treating cancer. In a specific embodiment, the IFN-γ secreting cells include type 1 helper T cells (Th1) and cytotoxic T lymphocytes (CTL).

本文中所使用的「T細胞抗原決定位胜肽」、「T細胞磷酸化 抗原決定位胜肽」或「輔助性T細胞抗原決定位」應理解為意指可以與第1類或第2類的MHC分子結合的胜肽序列,以形成呈現胜肽的MHC分子或是MHC複合體的形式,然後以這種形式,分別被細胞毒性T淋巴細胞或輔助性T細胞識別和結合。 As used herein, “T cell epitope peptide”, “T cell phosphorylation epitope peptide” or “helper T cell epitope” should be understood to mean that it can be used in conjunction with type 1 or type 2. The peptide sequence bound by the MHC molecule of the MHC molecule is formed in the form of a peptide-based MHC molecule or an MHC complex, and then in this form, it is recognized and bound by cytotoxic T lymphocytes or helper T cells, respectively.

本發明另提供一組合物,包含一脂化胜肽,其包含一脂質、一輔助性T細胞抗原決定位以及一胜肽,其中該脂質、該輔助性T細胞抗原決定位以及該胜肽三者並不互相連接,但三者皆與一胺基酸進行連接,其中該胜肽包含由Lys-X-X-Ser-Val-Glu-Thr-Asp-X(SEQ ID NO:9)所組成的胺基酸序列,其中X是白胺酸(Leu)或異白胺酸(Ile),且該絲胺酸(Ser)被磷酸化。 The present invention also provides a composition comprising a lipidated peptide, which comprises a lipid, a helper T cell epitope and a peptide, wherein the lipid, the helper T cell epitope and the peptide are three Those are not connected to each other, but the three are connected to an amino acid, wherein the peptide contains an amine composed of Lys-XX-Ser-Val-Glu-Thr-Asp-X (SEQ ID NO: 9) Base acid sequence, where X is leucine (Leu) or isoleucine (Ile), and the serine (Ser) is phosphorylated.

在一具體實施例中,該胜肽是一磷酸化胜肽。在一較佳具體實施例中,該胜肽的胺基酸序列為SEQ ID NO:6,其中SEQ ID NO:6的序列上第4個位置的胺基酸(Ser)(N端的第四殘基)被磷酸化。 In a specific embodiment, the peptide is a phosphorylated peptide. In a preferred embodiment, the amino acid sequence of the peptide is SEQ ID NO: 6, wherein the amino acid (Ser) at the fourth position in the sequence of SEQ ID NO: 6 (the fourth residue at the N terminal) Base) is phosphorylated.

於另一具體實施例中,該胜肽為HLA限制性胜肽。於一較佳具體實施例中,該胜肽為HLA-A限制性胜肽。於一更佳具體實施例中,該胜肽為HLA-A2限制性胜肽。 In another embodiment, the peptide is an HLA restricted peptide. In a preferred embodiment, the peptide is an HLA-A restricted peptide. In a more preferred embodiment, the peptide is an HLA-A2 restricted peptide.

該胜肽是基於來自腫瘤壞死因子受體相關蛋白1(TRAP1)的T細胞抗原決定位的胺基酸序列所設計的。因此,該胜肽可以誘發免疫細胞產生免疫反應去對抗表現TRAP1的細胞。 The peptide is designed based on the amino acid sequence of the T cell epitope derived from tumor necrosis factor receptor related protein 1 (TRAP1). Therefore, the peptide can induce immune cells to produce an immune response against cells expressing TRAP1.

在一具體實施例中,該脂質具有觸發類鐸受體路徑的功能。 在一較佳具體實施例中,該類鐸受體為類鐸受體2(TLR2)。 In a specific embodiment, the lipid has the function of triggering the toll-like receptor pathway. In a preferred embodiment, the toll-like receptor is toll-like receptor 2 (TLR2).

在另一具體實施例中,該脂質包含一脂肪酸。在一較佳具體實施例中,該脂肪酸包含一棕櫚酸。在一更佳具體實施例中,該棕櫚酸為Cys((RS)-2,3-(棕櫚醯基氧基)-丙基)-OH(Cys((RS)-2,3-di(palmitoyloxy)-propyl)-OH);或N-α-棕櫚醯基-S-[2,3-雙(棕櫚醯基氧基)-2RS]-丙基]-L-半胱胺酸(N-α-Palmitoyl-S-[2,3-bis(palmitoyloxy)-(2RS)-propyl]-L-cysteine)。 In another specific embodiment, the lipid comprises a fatty acid. In a preferred embodiment, the fatty acid includes palmitic acid. In a more preferred embodiment, the palmitic acid is Cys((RS)-2,3-(palmitoyloxy)-propyl)-OH(Cys((RS)-2,3-di(palmitoyloxy )-propyl)-OH); or N-α-palmitoyl-S-[2,3-bis(palmitoyloxy)-2RS]-propyl]-L-cysteine (N-α -Palmitoyl-S-[2,3-bis(palmitoyloxy)-(2RS)-propyl]-L-cysteine).

在一具體實施例中,該輔助性T細胞抗原決定位具有誘發輔助性T細胞的免疫反應的功能。在一較佳具體實施例中,該輔助性T細胞抗原決定位的序列包含一SEQ ID NO:5的胺基酸序列。於另一具體實施例中,該輔助性T細胞抗原決定位序列為HLA-DR限制性胜肽(HLA-DR-restricted peptide)。是以,該輔助性T細胞抗原決定位能與抗原呈現細胞上的HLA-DR分子結合形成一HLA-DR/輔助性T細胞抗原決定位的複合體,讓輔助性T細胞辨識,進而活化輔助性T細胞。 In a specific embodiment, the helper T cell epitope has the function of inducing the immune response of the helper T cell. In a preferred embodiment, the sequence of the helper T cell epitope includes an amino acid sequence of SEQ ID NO:5. In another specific embodiment, the helper T cell epitope sequence is an HLA-DR-restricted peptide. Therefore, the helper T cell epitope can combine with the HLA-DR molecule on the antigen presenting cell to form an HLA-DR/helper T cell epitope complex, allowing the helper T cell to recognize and activate the helper Sex T cells.

在另一具體實施例中,該組合物為一醫藥組合物。在一較佳具體實施例中,該醫藥組合物包含一醫藥上可接受的載體。 In another embodiment, the composition is a pharmaceutical composition. In a preferred embodiment, the pharmaceutical composition includes a pharmaceutically acceptable carrier.

在一具體實施例中,該組合物為一免疫原性組合物或一疫苗。在一較佳具體實施例中,該組合物為一疫苗。由於該脂質以及該輔助性T細胞抗原決定位可以作為該脂化胜肽的內在佐劑,故該組合物製備成疫苗時,無須額外添加佐劑,該疫苗就可以引起該個體的免疫反應。因此,該脂質以及該輔助性T細胞抗原決定位具有提高該疫苗的免疫原性的功效。 In a specific embodiment, the composition is an immunogenic composition or a vaccine. In a preferred embodiment, the composition is a vaccine. Since the lipid and the helper T cell epitope can be used as the internal adjuvant of the lipidated peptide, when the composition is prepared into a vaccine, no additional adjuvant is needed, and the vaccine can cause the individual's immune response. Therefore, the lipid and the helper T cell epitope have the effect of improving the immunogenicity of the vaccine.

本發明的包含該脂化胜肽的疫苗施打進一個體後,該疫苗能在該個體體內誘發免疫反應用以抑制表現TRAP1的癌細胞。於一具體實施例中,該包含該脂化胜肽的疫苗具有誘發免疫反應的能力。於一較佳具體實施例中,該免疫反應包含T細胞免疫反應。於一更佳具體實施例中,該T細胞包含輔助性T細胞以及細胞毒性T淋巴細胞。於另一具體實施例中,該疫苗用於治療癌症。於一較佳具體實施例中,該疫苗用於治療由表現TRAP1的癌細胞所引起的癌症。於一更佳具體實施例中,該疫苗抑制表現TRAP1的癌細胞生長。 After the vaccine containing the lipidated peptide of the present invention is injected into an individual, the vaccine can induce an immune response in the individual to inhibit cancer cells expressing TRAP1. In a specific embodiment, the vaccine containing the lipidated peptide has the ability to induce an immune response. In a preferred embodiment, the immune response includes T cell immune response. In a more preferred embodiment, the T cells include helper T cells and cytotoxic T lymphocytes. In another specific embodiment, the vaccine is used to treat cancer. In a preferred embodiment, the vaccine is used to treat cancers caused by cancer cells expressing TRAP1. In a more preferred embodiment, the vaccine inhibits the growth of cancer cells expressing TRAP1.

本發明進一步提供一種組合物用於製備治療一個體上的癌症的藥物的用途,其中該組合物包含一有效劑量的脂化胜肽,其包含一脂質、一輔助性T細胞抗原決定位以及一胜肽,其中該脂質、該輔助性T細胞抗原決定位以及該胜肽三者並不互相連接,但三者皆與一胺基酸進行連接,其中該胜肽包含由Lys-X-X-Ser-Val-Glu-Thr-Asp-X(SEQ ID NO:9)所組成的胺基酸序列,其中X是白胺酸(Leu)或異白胺酸(Ile),且該絲胺酸(Ser)被磷酸化。 The present invention further provides a composition for the preparation of a medicament for the treatment of cancer in a body, wherein the composition comprises an effective dose of lipidated peptide, which comprises a lipid, a helper T cell epitope and a A peptide, wherein the lipid, the helper T cell epitope, and the peptide are not connected to each other, but all three are connected to an amino acid, wherein the peptide contains Lys-XX-Ser- An amino acid sequence composed of Val-Glu-Thr-Asp-X (SEQ ID NO: 9), where X is leucine (Leu) or isoleucine (Ile), and the serine (Ser) Is phosphorylated.

在一具體實施例中,該胜肽是一磷酸化胜肽。在一較佳具體實施例中,該胜肽的胺基酸序列為SEQ ID NO:6,其中SEQ ID NO:6的序列上第4個位置的胺基酸(Ser)(N端的第四殘基)被磷酸化。 In a specific embodiment, the peptide is a phosphorylated peptide. In a preferred embodiment, the amino acid sequence of the peptide is SEQ ID NO: 6, wherein the amino acid (Ser) at the fourth position in the sequence of SEQ ID NO: 6 (the fourth residue at the N terminal) Base) is phosphorylated.

在一具體實施例中,該脂質具有觸發類鐸受體路徑的功能。在一較佳具體實施例中,該類鐸受體為類鐸受體2(TLR2)。 In a specific embodiment, the lipid has the function of triggering the toll-like receptor pathway. In a preferred embodiment, the toll-like receptor is toll-like receptor 2 (TLR2).

在另一具體實施例中,該脂質包含一脂肪酸。在一較佳具體 實施例中,該脂肪酸包含一棕櫚酸。在一更佳具體實施例中,該棕櫚酸為Cys((RS)-2,3-(棕櫚醯基氧基)-丙基)-OH(Cys((RS)-2,3-di(palmitoyloxy)-propyl)-OH);或N-α-棕櫚醯基-S-[2,3-雙(棕櫚醯基氧基)-2RS]-丙基]-L-半胱胺酸(N-α-Palmitoyl-S-[2,3-bis(palmitoyloxy)-(2RS)-propyl]-L-cysteine)。 In another specific embodiment, the lipid comprises a fatty acid. In a preferred embodiment, the fatty acid comprises palmitic acid. In a more preferred embodiment, the palmitic acid is Cys((RS)-2,3-(palmitoyloxy)-propyl)-OH(Cys((RS)-2,3-di(palmitoyloxy )-propyl)-OH); or N-α-palmitoyl-S-[2,3-bis(palmitoyloxy)-2RS]-propyl]-L-cysteine (N-α -Palmitoyl-S-[2,3-bis(palmitoyloxy)-(2RS)-propyl]-L-cysteine).

在一具體實施例中,該輔助性T細胞抗原決定位具有誘發輔助性T細胞的免疫反應的功能。在一較佳具體實施例中,該輔助性T細胞抗原決定位的序列包含一SEQ ID NO:5的胺基酸序列。於另一具體實施例中,該輔助性T細胞抗原決定位為HLA-DR限制性胜肽(HLA-DR-restricted peptide)。是以,該輔助性T細胞抗原決定位能與抗原呈現細胞上的HLA-DR分子結合形成一HLA-DR/輔助性T細胞抗原決定位的複合體,讓輔助性T細胞辨識,進而活化輔助性T細胞。 In a specific embodiment, the helper T cell epitope has the function of inducing the immune response of the helper T cell. In a preferred embodiment, the sequence of the helper T cell epitope includes an amino acid sequence of SEQ ID NO:5. In another specific embodiment, the helper T cell epitope is an HLA-DR-restricted peptide. Therefore, the helper T cell epitope can combine with the HLA-DR molecule on the antigen presenting cell to form an HLA-DR/helper T cell epitope complex, allowing the helper T cell to recognize and activate the helper Sex T cells.

於另一具體實施例中,該胜肽為HLA限制性胜肽。於一較佳具體實施例中,該胜肽為HLA-A限制性胜肽。於一更佳具體實施例中,該胜肽為HLA-A2限制性胜肽。故該個體為一體內具有HLA-A2的個體,以讓該包含該脂化胜肽的藥物施予進該個體體內,能與HLA-A2分子結合以誘發免疫反應。於另一具體實施例中,該個體為具有HLA分子為HLA-A的個體。於一較佳具體實施例中,該個體為具有HLA分子為HLA-A2的個體 In another embodiment, the peptide is an HLA restricted peptide. In a preferred embodiment, the peptide is an HLA-A restricted peptide. In a more preferred embodiment, the peptide is an HLA-A2 restricted peptide. Therefore, the individual is an individual with HLA-A2 in one body, so that the drug containing the lipidated peptide can be administered into the individual's body and can bind with HLA-A2 molecules to induce an immune response. In another specific embodiment, the individual is an individual with an HLA molecule of HLA-A. In a preferred embodiment, the individual is an individual with an HLA molecule HLA-A2

該胜肽是基於來自腫瘤壞死因子受體相關蛋白1(TRAP1)的T細胞抗原決定位的胺基酸序列所設計的。在一具體實施例中,該胜肽 為一衍生自TRAP1的T細胞抗原決定位胜肽。在一較佳具體實施例中,該胜肽為一衍生自TRAP1的T細胞磷酸化抗原決定位胜肽。因此,該胜肽可以誘發免疫細胞產生免疫反應去對抗表現TRAP1的細胞。於一具體實施例中,該免疫細胞包含第1型輔助性T細胞(Th1)、細胞毒性T淋巴細胞(CTL)、有能力誘發Th1細胞之抗原呈現細胞(APC)、及有能力誘發CTL之APC。於一較佳具體實施例中,該免疫細胞包含第1型輔助性T細胞(Th1)以及細胞毒性T淋巴細胞(CTL)。於一更佳具體實施例中,該細胞毒性T淋巴細胞為CD8+ T細胞。在另一具體實施例中,該胜肽為一細胞毒性T細胞抗原決定位胜肽。在一較佳具體實施例中,該胜肽為一細胞毒性T細胞磷酸化抗原決定位胜肽。 The peptide is designed based on the amino acid sequence of the T cell epitope derived from tumor necrosis factor receptor related protein 1 (TRAP1). In a specific embodiment, the peptide is a T cell epitope peptide derived from TRAP1. In a preferred embodiment, the peptide is a T cell phosphorylated epitope peptide derived from TRAP1. Therefore, the peptide can induce immune cells to produce an immune response against cells expressing TRAP1. In a specific embodiment, the immune cells include type 1 helper T cells (Th1), cytotoxic T lymphocytes (CTL), antigen presenting cells (APC) capable of inducing Th1 cells, and those capable of inducing CTL APC. In a preferred embodiment, the immune cells include type 1 helper T cells (Th1) and cytotoxic T lymphocytes (CTL). In a more preferred embodiment, the cytotoxic T lymphocytes are CD8 + T cells. In another specific embodiment, the peptide is a cytotoxic T cell epitope peptide. In a preferred embodiment, the peptide is a cytotoxic T cell phosphorylated epitope peptide.

於另一具體實施例中,該癌症是由表現TRAP1的癌細胞所引起的癌症。於一具體實施例中,該癌症包含肺癌、頭頸癌、乳癌、胰臟癌、淋巴瘤、骨髓瘤、白血病、腎癌、卵巢癌、骨癌、肝癌、前列腺癌、皮膚癌、大腸癌和甲狀腺癌。於一較佳具體實施例中,該癌症為肺癌、乳癌、卵巢癌、大腸癌或前列腺癌。於一更佳具體實施例,該癌症是肺癌。 In another embodiment, the cancer is a cancer caused by cancer cells expressing TRAP1. In a specific embodiment, the cancer includes lung cancer, head and neck cancer, breast cancer, pancreatic cancer, lymphoma, myeloma, leukemia, kidney cancer, ovarian cancer, bone cancer, liver cancer, prostate cancer, skin cancer, colorectal cancer, and thyroid cancer. cancer. In a preferred embodiment, the cancer is lung cancer, breast cancer, ovarian cancer, colorectal cancer or prostate cancer. In a more preferred embodiment, the cancer is lung cancer.

於一具體實施例中,該脂化胜肽的有效劑量範圍為0.1mg/公斤體重至10mg/公斤體重。於一較佳具體實施例中,該脂化胜肽的有效劑量範圍為0.5mg/公斤體重至4mg/公斤體重。於一更佳具體實施例中,該脂化胜肽的有效劑量範圍為為1.5mg/公斤體重至2mg/公斤體重。 In a specific embodiment, the effective dose of the lipidated peptide ranges from 0.1 mg/kg body weight to 10 mg/kg body weight. In a preferred embodiment, the effective dose of the lipidated peptide ranges from 0.5 mg/kg body weight to 4 mg/kg body weight. In a more preferred embodiment, the effective dose of the lipidated peptide ranges from 1.5 mg/kg body weight to 2 mg/kg body weight.

由於該脂質以及該輔助性T細胞抗原決定位可以作為該脂化胜肽的內在佐劑,能提高免疫原性或促進免疫反應。於一具體實施例中, 該脂質以及該輔助性T細胞抗原決定位具有提高免疫原性或促進免疫反應的功能。因此,包含該脂化胜肽的藥物進入該個體體內後,會與一抗原呈現細胞上的HLA分子結合形成一HLA/脂化胜肽複合體,以活化能分泌IFN-γ的T細胞(例如Th1和CTL),來抑制表現TRAP1的腫瘤細胞生長,進而治療癌症。於一具體實施例中,該脂化胜肽具有誘發免疫細胞的免疫反應的能力,以治療癌症。於一較佳具體實施例中,該脂化胜肽具有誘發T細胞的免疫反應的能力,以治療癌症。於一較佳具體實施例中,該脂化胜肽具有誘發分泌IFN-γ的T細胞的免疫反應的能力,以治療癌症。 Because the lipid and the helper T cell epitope can be used as the internal adjuvant of the lipidated peptide, it can improve immunogenicity or promote immune response. In a specific embodiment, the lipid and the helper T cell epitope have the function of improving immunogenicity or promoting immune response. Therefore, after the drug containing the lipidated peptide enters the body of the individual, it will combine with HLA molecules on an antigen-presenting cell to form an HLA/lipidated peptide complex to activate T cells that can secrete IFN-γ (such as Th1 and CTL) to inhibit the growth of tumor cells expressing TRAP1, thereby treating cancer. In a specific embodiment, the lipidated peptide has the ability to induce the immune response of immune cells to treat cancer. In a preferred embodiment, the lipidated peptide has the ability to induce the immune response of T cells to treat cancer. In a preferred embodiment, the lipidated peptide has the ability to induce the immune response of IFN-γ-secreting T cells to treat cancer.

於另一具體實施例中,該T細胞或是該分泌IFN-γ的T細胞包含第1型輔助性T細胞(Th1)以及細胞毒性T淋巴細胞(CTL)。於一較佳具體實施例中,該細胞毒性T淋巴細胞為CD8+ T細胞。 In another specific embodiment, the T cell or the IFN-γ-secreting T cell includes type 1 helper T cells (Th1) and cytotoxic T lymphocytes (CTL). In a preferred embodiment, the cytotoxic T lymphocytes are CD8 + T cells.

是以,包含該脂化胜肽的藥物的劑型可以為一疫苗,且該疫苗無須添加佐劑。該疫苗能對表現TRAP1的細胞誘發T細胞反應以治療因表現TRAP1的細胞所引起的疾病或癌症。 Therefore, the dosage form of the drug containing the lipidated peptide can be a vaccine, and the vaccine does not need to add an adjuvant. The vaccine can induce T cell response to cells expressing TRAP1 to treat diseases or cancers caused by cells expressing TRAP1.

本發明證明TRAP1的腫瘤反應性T細胞抗原決定位能夠用於癌症治療。在本發明中,TRAP1衍生的HLA-A2限制性磷酸化胜肽KLIpS(即SEQ ID NO:6)上的新磷酸化位點為胜肽特異性T細胞誘發提供獨特的特徵。首先,磷酸化增強KLIpS與HLA-A2分子結合親和力(穩定的HLA-胜肽複合體對於T細胞受體(T cell receptor,TCR)識別是必需的)。第二,磷酸結合在該磷酸化胜肽序列上的從N端算起的第四個胺基酸上,其為TCR識別的主要殘基。已知TCR可區分HLA/胜肽複合體的變化,然後引 發細胞因子對標靶細胞的反應。作為具有位點特異性磷酸化配體的良好HLA-A2結合物,KLIpS的免疫作用顯示會引發抗原特異性T細胞反應。此外,KLIpS誘發的T細胞可被磷酸胜肽再刺激分泌IFN-γ,以誘發足夠的分泌IFN-γ的T細胞可有效消除腫瘤,其中IFN-γ可上調標靶細胞上MHC表現,並將細胞毒性淋巴細胞動員至腫瘤相關抗原。 The present invention proves that the tumor-reactive T cell epitope of TRAP1 can be used for cancer treatment. In the present invention, the new phosphorylation site on the HLA-A2-restricted phosphorylation peptide KLIpS (ie SEQ ID NO: 6) derived from TRAP provides a unique feature for peptide-specific T cell induction. First, phosphorylation enhances the binding affinity of KLIpS to HLA-A2 molecules (a stable HLA-peptide complex is necessary for T cell receptor (TCR) recognition). Second, phosphoric acid binds to the fourth amino acid from the N-terminus on the phosphorylated peptide sequence, which is the main residue recognized by TCR. It is known that TCR can distinguish changes in the HLA/peptide complex and then trigger a cytokine response to target cells. As a good HLA-A2 conjugate with site-specific phosphorylation ligand, the immune effect of KLIpS has been shown to trigger an antigen-specific T cell response. In addition, KLIpS-induced T cells can be stimulated by phosphopeptides to secrete IFN-γ, so as to induce sufficient IFN-γ-secreting T cells to effectively eliminate tumors. Among them, IFN-γ can up-regulate MHC expression on target cells, and Mobilization of cytotoxic lymphocytes to tumor-associated antigens.

此外,本發明亦證明用脂質、輔助性T細胞抗原決定位以及上述磷酸化胜肽(KLIpS)所建構出的脂化胜肽也會引發抗原特異性T細胞反應。由於該脂質以及該輔助性T細胞抗原決定位可以作為該脂化胜肽的內在佐劑,故能提高免疫原性或促進免疫反應。該脂化胜肽能夠刺激分泌IFN-γ的T細胞去抑制表現TRAP1的腫瘤生長。 In addition, the present invention also proves that lipids, helper T cell epitopes and lipidated peptides constructed with the above phosphorylated peptides (KLIpS) can also trigger antigen-specific T cell responses. Since the lipid and the helper T cell epitope can be used as the internal adjuvant of the lipidated peptide, it can improve immunogenicity or promote immune response. The lipidated peptide can stimulate T cells that secrete IFN-γ to inhibit the growth of tumors expressing TRAP1.

鑑於以上所述,本發明鑑別出衍生自腫瘤相關TRAP1蛋白的HLA-A2限制性磷酸化胜肽(KLIpS)。KLIpS似乎是免疫原性CTL抗原決定位,其可以引發針對癌細胞的抗原特異性CTL並抑制腫瘤生長,這突顯了KLIpS可作為發展具有TRAP1的癌症治療上之免疫治療候選疫苗。直到今日,積累的研究表明TRAP1在癌細胞株中高度表現;本發明證實KLIpS是引發CTL活化以控制TRAP1高表現腫瘤的理想標靶。基於胜肽的癌症免疫療法的原理是基於抗原特異性CTL與人類癌細胞株上的標靶之間的匹配。因此,KLIpS的抗腫瘤作用可用於不同的癌細胞株。 In view of the above, the present invention identifies HLA-A2-restricted phosphorylated peptides (KLIpS) derived from tumor-associated TRAP1 protein. KLIpS seems to be an immunogenic CTL epitope, which can trigger antigen-specific CTLs against cancer cells and inhibit tumor growth. This highlights KLIpS as a vaccine candidate for developing cancer therapy with TRAP1. Until today, accumulated studies have shown that TRAP1 is highly expressed in cancer cell lines; the present invention proves that KLIpS is an ideal target for triggering CTL activation to control TRAP1 high-performance tumors. The principle of peptide-based cancer immunotherapy is based on the matching between antigen-specific CTLs and targets on human cancer cell lines. Therefore, the anti-tumor effect of KLIpS can be used for different cancer cell lines.

圖1顯示TRAP1蛋白在肺癌細胞株和患者惡性肺部腫瘤組織中表現程度高。圖1(A)顯示TC1/AAD(含有HLA-A2.1的α1+α2結構域和H-2Dd的α3結構域)、TC1以及H2981的腫瘤組織和正常小鼠肺組織中TRAP1蛋白之豐度(abundance)的西方墨點分析。β-肌動蛋白(β-actin)在此分析中作為加載內部對照組。圖1(B)顯示患者的惡性肺部腫瘤組織和鄰近正常組織中TRAP1蛋白表現程度的免疫組織化學染色之結果。 Figure 1 shows that TRAP1 protein is highly expressed in lung cancer cell lines and patients with malignant lung tumor tissues. Figure 1(A) shows the abundance of TRAP1 protein in TC1/AAD (containing the α1+α2 domain of HLA-A2.1 and the α3 domain of H-2Dd), TC1 and H2981 tumor tissue and normal mouse lung tissue (abundance) of Western ink dot analysis. β-actin (β-actin) served as the loading internal control in this analysis. Figure 1(B) shows the results of immunohistochemical staining of the expression level of TRAP1 protein in the patient's malignant lung tumor tissue and adjacent normal tissues.

圖2顯示免疫沉澱的KLIpS和參考性合成胜肽的比較串聯MS質譜分析。胜肽片段的顯著性離子(b和y,m/z)標記在匹配的m/z的離子之波峰。 Figure 2 shows a comparative tandem MS mass spectrometry analysis of immunoprecipitated KLIpS and a reference synthetic peptide. The significant ions (b and y, m/z) of the peptide fragment are marked on the peak of the matched m/z ion.

圖3顯示免疫沉澱的RQLpS和參考性合成胜肽的比較串聯MS分析。胜肽片段的顯著性離子(b和y,m/z)標記在匹配的m/z的離子之波峰。 Figure 3 shows a comparative tandem MS analysis of immunoprecipitated RQLpS and a reference synthetic peptide. The significant ions (b and y, m/z) of the peptide fragment are marked on the peak of the matched m/z ion.

圖4顯示針對所選胜肽候選物的T2細胞穩定性分析。圖4(A)顯示10μM合成胜肽溶液與T2細胞混合後,接著定量穩定的HLA-A *02:01複合體的數量,以分析HLA分子與各胜肽的親和性鍵結。實驗組:KLIpS(磷酸化胜肽,黑色實線)和KLIS(不含磷酸根的胜肽,黑色虛線);以及對照組:VYC(HLA-A11胜肽,淺灰色粗線)和YML(HLA-A2限制性胜肽,淺灰色細線)。同型抗體(isotype antibody)所染色的細胞用深灰色實心線標記。圖4(B)顯示HLA-A*02:01與各種胜肽的結合親和力之比較柱狀圖。相對的平均螢光強度(MFI)之計算方式為:(胜肽的MFI/VYC的MFI)×100%(KLIS對KLIpS,[p]<0.01 **)。所示數據代表三個實驗。 Figure 4 shows T2 cell stability analysis for selected peptide candidates. Figure 4(A) shows that after 10 μM synthetic peptide solution is mixed with T2 cells, the number of stable HLA-A *02:01 complexes is then quantified to analyze the affinity bonding between HLA molecules and each peptide. Experimental group: KLIpS (phosphorylated peptide, black solid line) and KLIS (phosphate-free peptide, black dashed line); and control group: VYC (HLA-A11 peptide, light gray thick line) and YML (HLA) -A2 restricted peptide, light gray thin line). Cells stained with isotype antibody are marked with dark gray solid lines. Figure 4(B) shows a bar graph comparing the binding affinity of HLA-A*02:01 and various peptides. The relative average fluorescence intensity (MFI) is calculated as: (MFI of peptide/MFI of VYC)×100% (KLIS vs. KLIpS, [p]<0.01 **). The data shown is representative of three experiments.

圖5顯示KLIpS免疫作用引起分泌IFN-γ之抗原特異性CD8+ T細胞群。圖5(A)顯示用KLIpS免疫AAD轉殖基因小鼠和野生型 (WT)小鼠,再以ELISPOT分析檢測IFN-γ的分泌量。KLIpS免疫AAD轉殖基因小鼠中誘發足夠的分泌IFN-γ的細胞,但野生型小鼠則沒有(p<0.01 **)。圖5(B)顯示藉由ELISPOT分析檢測轉殖基因小鼠中胜肽對T細胞的免疫誘發作用。用胜肽候選物免疫AAD轉殖基因小鼠(數量為5),然後收集腹股溝處的淋巴結用於檢測分泌IFN-γ的細胞群。在抗原再刺激下,用KLIpS和YML(陽性對照組)免疫的小鼠之淋巴結中檢測到足夠的分泌IFN-γ的細胞,但在用KLIS和VYC免疫的小鼠(陰性對照組)中幾乎看不到。(KLIS對KLIpS,p<0.01 **)。圖5(C)顯示進行交叉抗原再刺激以測定AAD轉殖基因小鼠中胜肽誘發的分泌IFN-γ的細胞之特異性。藉由ELISPOT分析檢測分泌IFN-γ的細胞(在KLIpS再刺激組內:KLIS對KLIpS免疫;對於KLIpS免疫:KLIS對KLIpS再刺激;p<0.01 **)。圖5(D)顯示胜肽免疫的小鼠脾臟細胞中效應T細胞(effector T cell)群的檢測。在給予抗原後,流式細胞儀顯示在KLIpS免疫的AAD轉殖基因小鼠的淋巴細胞中有顯著受刺激的分泌IFN-γ的CD8+ T細胞群。圖5(E)顯示CD8+ T細胞中分泌IFN-γ細胞的百分比(KLIS對KLIpS,p<0.01 **)。所示數據是代表性的三個實驗。 Figure 5 shows that the immune effect of KLIpS causes the secretion of IFN-γ antigen-specific CD8 + T cell population. Figure 5(A) shows that AAD transgenic mice and wild-type (WT) mice were immunized with KLIpS, and then the secretion of IFN-γ was detected by ELISPOT analysis. KLIpS immunized AAD transgenic mice induced enough IFN-γ-secreting cells, but wild-type mice did not (p<0.01 **). Figure 5(B) shows the immune induction effect of peptides on T cells in transgenic mice detected by ELISPOT analysis. The peptide candidates were used to immunize AAD transgenic mice (the number is 5), and then the lymph nodes in the groin were collected for detection of IFN-γ-secreting cell populations. Under antigen restimulation, sufficient IFN-γ-secreting cells were detected in the lymph nodes of mice immunized with KLIpS and YML (positive control group), but almost in mice immunized with KLIS and VYC (negative control group) can not see. (KLIS vs. KLIpS, p<0.01 **). Figure 5(C) shows cross-antigen restimulation to determine the specificity of peptide-induced IFN-γ secreting cells in AAD transgenic mice. The cells secreting IFN-γ were detected by ELISPOT analysis (in the KLIpS re-stimulation group: KLIS is immune to KLIpS; for KLIpS immunity: KLIS is re-stimulated to KLIpS; p<0.01 **). Figure 5(D) shows the detection of effector T cell population in the spleen cells of peptide-immunized mice. After the antigen was administered, flow cytometry showed that there were significantly stimulated IFN-γ-secreting CD8 + T cell populations in the lymphocytes of KLIpS-immunized AAD transgenic mice. Figure 5(E) shows the percentage of IFN-γ secreting cells in CD8 + T cells (KLIS vs. KLIpS, p<0.01 **). The data shown are representative of three experiments.

圖6顯示KLIpS免疫可以誘發CTL的抗原特異性細胞毒殺活性。圖6(A)顯示在第0天和第7天用50μl以IFA所配製的KLIS或KLIpS免疫AAD轉殖基因小鼠;PBS作為對照組。在第14天,透過體內嗜殺試驗檢測CTL對胜肽脈衝的特異性標靶細胞的細胞毒殺活性(KLIS對KLIpS,p<0.01 **)。圖6(B)顯示在第0天和第7天用50μg KLIpS/IFA免疫的AAD轉殖基因小鼠。藉由MACS分離試劑盒從脾臟和引流的淋巴結中純化CD8+ T細胞。將5×105個純化的CD8+ T細胞與5×10351Cr標記的H2981共同培養18小時。對於抑制實驗,先將51Cr標記的H2981細胞與20μg/ml W6/32抗體共同孵育或將純化的CD8+ T細胞與10μg/ml 53-6.7抗體孵育15分鐘,再共同培養。藉由51Cr-釋放測定測定每組中特異性裂解(w/o抗體對抗-HLA抗體,p<0.05 *;w/o抗體對抗-CD8抗體,p<0.01 **)。 Figure 6 shows that KLIpS immunization can induce the antigen-specific cytotoxic activity of CTL. Figure 6(A) shows that AAD transgenic mice were immunized with 50 μl of KLIS or KLIpS formulated with IFA on day 0 and day 7; PBS was used as a control group. On the 14th day, the cytotoxic activity of CTL against peptide-pulsed specific target cells was detected by in vivo killing test (KLIS vs. KLIpS, p<0.01 **). Figure 6(B) shows AAD transgenic mice immunized with 50 μg KLIpS/IFA on day 0 and day 7. Purify CD8 + T cells from the spleen and draining lymph nodes with the MACS isolation kit. 5×10 5 purified CD8 + T cells were co-cultured with 5×10 3 51 Cr-labeled H2981 for 18 hours. For inhibition experiments, first incubate 51 Cr-labeled H2981 cells with 20μg/ml W6/32 antibody or incubate purified CD8 + T cells with 10μg/ml 53-6.7 antibody for 15 minutes, and then co-culture. The specific lysis in each group was determined by 51 Cr-release assay (w/o antibody anti-HLA antibody, p<0.05*; w/o antibody anti-CD8 antibody, p<0.01 **).

圖7顯示KLIpS的免疫作用可延遲腫瘤生長。在第7天和第14天用50μg以IFA所配製的KLIS、KLIpS或YML(對照組)免疫TC1/AAD罹患腫瘤的小鼠。圖7(A)顯示平均腫瘤大小(mm3)。數據以平均值±標準誤差(SEM)(KLIS對KLIpS,p<0.01 **)表示。圖7(B)顯示存活率。圖7(C)顯示KLIpS免疫誘發的CTL反應可以在異種移植(xenograft)模型中抑制人類肺癌腫瘤生長。 Figure 7 shows that the immune effect of KLIpS can delay tumor growth. On the 7th and 14th days, 50μg of KLIS, KLIpS or YML (control group) formulated with IFA was used to immunize TC1/AAD tumor-bearing mice. Figure 7(A) shows the average tumor size (mm 3 ). Data are expressed as mean ± standard error (SEM) (KLIS vs. KLIpS, p<0.01 **). Figure 7(B) shows the survival rate. Figure 7(C) shows that the CTL response induced by KLIpS immunity can inhibit the growth of human lung cancer tumors in a xenograft model.

圖8顯示藉由ELISPOT分析監測轉殖基因小鼠中棕櫚酸酯化胜肽之免疫作用下的T細胞誘發。 Figure 8 shows the monitoring of T cell induction under the immune effect of palmitate peptides in transgenic mice by ELISPOT analysis.

圖9顯示棕櫚酸酯化胜肽的免疫作用可引發抗腫瘤反應以抑制腫瘤生長。 Figure 9 shows that the immune effect of palmitate peptides can trigger an anti-tumor response to inhibit tumor growth.

本發明可以用不同的形式實施,並不限於以下所提的實施例。以下實施例僅表現本發明的各個面向和特色。 The present invention can be implemented in different forms and is not limited to the embodiments mentioned below. The following embodiments only show the various aspects and features of the present invention.

(A)材料與方法 (A) Materials and methods

1.動物與細胞株 1. Animals and cell lines

本發明使用國家動物中心的C57BL/6野生型小鼠。轉殖基因小鼠係購自傑克遜實驗室(The Jackson Laboratory,Sacramento,CA)。所有動物研究均由國家衛生研究院(National Health Research Institutes,NHRI)的實驗動物照護及使用委員會所批准。小鼠肺癌上皮細胞,TC1/AAD,係來自表現AAD的母細胞(parental cell)TC1,其從AAD(包含HLA-A2.1的α1+α2結構域和H-2Dd的α3結構域)轉殖基因小鼠所獲得。簡單來說,用一對引子5'-CCCAAGCTTATGGCCGTCATGGCGCCCCGA-3'(SEQ ID NO:1)和5'-GCTCTAGATCACACTTTACAATCTGGGAG-3'(SEQ ID NO:2)去擴增HLA-AAD轉殖基因小鼠的脾臟細胞(splenocytes)內能編碼出AAD嵌合蛋白的DNA片段。將擴增的DNA片段進一步克隆到pcDNA4/TO/myc-His質體(Thermo Fisher Scientific Inc.,USA)中以產生pcDNA4/TO/myc-His/AAD。將pcDNA4/TO/myc-His/AAD轉染進TC1細胞內以產生TC1/AAD穩定的細胞株。將H2981(HLA-A*02:01)的人類肺癌細胞株培養在完全RPMI培養基(RPMI 1640,GIBCO)中,該培養基包含10%熱滅活的胎牛血清(fetal bovine serum)(HyClone)、100單位/mL的盤尼西林(penicillin)和100μg/mL鏈黴素(streptomycin)(GIBCO)、1mM丙酮酸鈉(sodium pyruvate)和5mM HEPES,且該培養基置放在37℃及5% CO2的培養箱中孵育。 The present invention uses C57BL/6 wild-type mice from the National Animal Center. The transgenic mouse line was purchased from The Jackson Laboratory (Sacramento, CA). All animal studies were approved by the Laboratory Animal Care and Use Committee of the National Health Research Institutes (NHRI). Mouse lung cancer epithelial cells, TC1/AAD, are derived from AAD-expressing parental cell TC1, which is transgenic from AAD (containing the α1+α2 domain of HLA-A2.1 and the α3 domain of H-2Dd) Gene obtained from mice. In brief, a pair of primers 5'-CCCAAGCTTATGGCCGTCATGGCGCCCCGA-3' (SEQ ID NO: 1) and 5'-GCTCTAGATCACACTTTACAATCTGGGAG-3' (SEQ ID NO: 2) were used to amplify the spleens of HLA-AAD transgenic mice Cells (splenocytes) can encode DNA fragments of AAD chimeric protein. The amplified DNA fragment was further cloned into pcDNA4/TO/myc-His plastid (Thermo Fisher Scientific Inc., USA) to generate pcDNA4/TO/myc-His/AAD. PcDNA4/TO/myc-His/AAD was transfected into TC1 cells to produce a stable TC1/AAD cell line. The H2981 (HLA-A*02:01) human lung cancer cell line was cultured in complete RPMI medium (RPMI 1640, GIBCO), which contains 10% heat-inactivated fetal bovine serum (HyClone), 100 units/mL penicillin and 100μg/mL streptomycin (GIBCO), 1mM sodium pyruvate and 5mM HEPES, and the medium is placed at 37℃ and 5% CO 2 Incubate in the box.

2.西方墨點法分析 2. Analysis of western ink dot method

用冷的磷酸鹽緩衝生理鹽水(PBS)之緩衝液洗滌所收集的細胞,然後用含有蛋白質酵素抑製劑片劑(cOmplete,Roche)的RIPA緩衝液(含0.1% RIPA於100mM PBS緩衝液中,pH 7.8)裂解細胞。AAD轉殖基因小鼠的肺部組織在西方墨點法(western blot)分析中作為對照組。在冰浴中用陶瓷珠(ceramic beads)(100μm,EE-TEC Ltd.,Taiwan)將肺部組織粉碎,然後在4℃下用10mL RIPA緩衝液進行細胞裂解。隨後,用BCA試劑(BCA Protein Assay Kit,Pierce)定量細胞裂解物和對照組的組織之蛋白質濃度。將BLUeye預染色蛋白質梯度(BLUeye prestained protein ladder,GeneDireX,Canada)之標準試劑用於十二烷基磺酸鈉-聚丙烯醯胺膠凝體電泳(SDS-PAGE)上。透過4-12% SDS PAGE(NuPAGE,ThermoFisher Scientific)分離總共50μg的蛋白質,然後將其轉移至PVDF膜上。為了減少非特異性結合的發生,在每個洗滌步驟中,使用PBST(含有0.05% Tween 20的1×PBS緩衝液)緩衝液作為洗滌緩衝液。用含5%脫脂牛乳的PBST對墨點膜進行阻斷作用,並在4℃下反應過夜。隨後,切割墨點膜並分別與稀釋的抗TRAP1抗體(在PBST中1:1000,兔多克隆抗體,ab8227,Abcam)和抗肌動蛋白(anti-actin)抗體(在PBST中1:10000,兔多克隆抗體,ab151239,Abcam)一起孵育。然後在增強的化學發光溶液(Millipore)中用山葵過氧化氫酵素(horseradish peroxidase,HRP)-共軛的檢測抗體(在PBST中1:10000,山羊多克隆抗體,ab6721,Abcam)對墨點膜進行染色。 Wash the collected cells with cold phosphate buffered saline (PBS) buffer, and then use RIPA buffer containing protease inhibitor tablets (cOmplete, Roche) (containing 0.1% RIPA in 100mM PBS buffer, pH 7.8) Lyse cells. The lung tissues of AAD transgenic mice were used as a control group in western blot analysis. The lung tissue was crushed with ceramic beads (100 μm, EE-TEC Ltd., Taiwan) in an ice bath, and then the cells were lysed with 10 mL of RIPA buffer at 4°C. Subsequently, BCA reagent (BCA Protein Assay Kit, Pierce) was used to quantify the protein concentration of cell lysates and control tissues. BLUeye prestained protein ladder (BLUeye prestained protein ladder, GeneDireX, Canada) standard reagents were used for sodium dodecyl sulfonate-polyacrylamide gel electrophoresis (SDS-PAGE). A total of 50μg of protein was separated by 4-12% SDS PAGE (NuPAGE, ThermoFisher Scientific), and then transferred to PVDF membrane. In order to reduce the occurrence of non-specific binding, PBST (1×PBS buffer containing 0.05% Tween 20) buffer was used as the washing buffer in each washing step. The ink dot film was blocked with PBST containing 5% skim milk and reacted overnight at 4°C. Subsequently, the ink dot film was cut and combined with diluted anti-TRAP1 antibody (1:1000 in PBST, rabbit polyclonal antibody, ab8227, Abcam) and anti-actin antibody (1:10000 in PBST, Rabbit polyclonal antibody, ab151239, Abcam) were incubated together. Then use horseradish peroxidase (HRP)-conjugated detection antibody (1:10000 in PBST, goat polyclonal antibody, ab6721, Abcam) in enhanced chemiluminescence solution (Millipore) to test the ink dot membrane Perform dyeing.

3.免疫組織化學染色 3. Immunohistochemical staining

肺部非小細胞癌組織陣列是購自美國公司(US Biomax, LC10012)。如先前文獻(Lin CY et al.,2014,cancer research 74:5229-5243)所述,藉由免疫組織化學染色評估來自肺癌患者的臨床樣本中的腫瘤壞死因子受體相關蛋白1(TRAP1)的表現程度。利用成對的腫瘤組織和相鄰組織來比較染色強度;而由於組織陣列中少掉一核心,故來自總共45個病例的44個配對樣本會被包括在本分析中。組織切片會與兔抗人類TRAP1蛋白(LS-C31383;LifeSpan BioSciences)以及HRP共軛卵白素-生物素複合體(Avidin-biotin complex,ABC)(來自Vectastain Elite ABC試劑(Vector Laboratories)和AEC色原體(chromogen)(Vector Laboratories))相互進行作用。所有樣本中的TRAP1染色強度由病理學家評分。 The lung non-small cell carcinoma tissue array was purchased from a US company (US Biomax, LC10012). As described in the previous literature (Lin CY et al., 2014, cancer research 74: 5229-5243), immunohistochemical staining was used to evaluate the tumor necrosis factor receptor-related protein 1 (TRAP1) in clinical samples from lung cancer patients. Degree of performance. Paired tumor tissues and adjacent tissues are used to compare the staining intensity; and because one core is missing from the tissue array, 44 paired samples from a total of 45 cases will be included in this analysis. Tissue sections will be combined with rabbit anti-human TRAP1 protein (LS-C31383; LifeSpan BioSciences) and HRP conjugated avidin-biotin complex (ABC) (from Vectastain Elite ABC reagent (Vector Laboratories) and AEC chromogen Chromogen (Vector Laboratories) interacts with each other. The intensity of TRAP1 staining in all samples was scored by a pathologist.

4.分離HLA-AAD胜肽 4. Separation of HLA-AAD peptides

依照先前文獻所述(Meyer VS et al.,2009,journal of proteome research 8:3666-3674)的方法稍作修改,藉由免疫沉澱法(immunoprecipitation)來獲得HLA-AAD胜肽。先用兩個旋轉瓶(spinner flask)(1×109細胞/升)收集TC1/AAD細胞,然後用CHAPS溶液(含1%的CHAPS在冰的PBS緩衝液中,pH 7.8)裂解細胞,再以2000rpm離心10分鐘以去除細胞碎片。藉由抗HLA-A2抗體(BB7.2)-固定化管柱(immobilized column)對HLA-AAD-胜肽複合體進行免疫沉澱作用,並使用超速離心管柱(ultracentrifuge column)(10kDa截留膜,Millipore,Billerica,MA)和反相旋轉管柱(reverse phase spin column)(C18,Invitrogen)依序萃取相關胜肽。將脫鹽後的分析物凍乾,然後使之再懸浮於乙腈(acetonitrile,ACN)溶液(含5% ACN的去離子水溶液)內以進行液相層 析串聯質譜儀(LC-MS/MS)分析。 According to the method described in the previous literature (Meyer VS et al., 2009, journal of proteome research 8: 3666-3674), the HLA-AAD peptide was obtained by immunoprecipitation with slight modification. First use two spinner flasks (1×10 9 cells/liter) to collect TC1/AAD cells, then use CHAPS solution (containing 1% CHAPS in ice PBS buffer, pH 7.8) to lyse the cells, and then Centrifuge at 2000 rpm for 10 minutes to remove cell debris. The HLA-AAD-peptide complex was immunoprecipitated by anti-HLA-A2 antibody (BB7.2)-immobilized column, and an ultracentrifuge column (10kDa retention membrane, Millipore, Billerica, MA) and a reverse phase spin column (C18, Invitrogen) were used to extract related peptides in sequence. The desalted analyte is lyophilized and then resuspended in acetonitrile (ACN) solution (a deionized water solution containing 5% ACN) for liquid chromatography tandem mass spectrometry (LC-MS/MS) analysis .

5.用LC-MS/MS鑑別HLA胜肽 5. Identify HLA peptides by LC-MS/MS

使用搭配Ultimate 3000 RSLC系統(Dionex)的Q Exactive質譜儀(Thermo Scientific,USA)的系統用於定序HLA胜肽。使用反相管柱(reverse phase column)(C18,Acclaim pepmap RSLC,75μm×150mm,孔徑2μm,Dionex)分離複合胜肽混合物。流動相的製備如下:A:0.1%甲酸(FA)在5%乙腈(ACN)(V/V)中;以及B:0.1% FA在95% ACN(V/V)中。本發明設計一線性梯度,在40分鐘內先從1% B開始升至25% B,之後在18分鐘內增加至80% B以洗脫管柱中的所有分析物。在m/z 300-2000的範圍內進行質譜掃描,並且對來自質譜掃描下10種最強離子進行裂解(fragmentation)以獲得MS/MS(串聯MS)質譜。使用軟體(Proteome Discoverer 1.3)將MS原始數據轉換為波峰清單(peak list)。使用具有自我構建的資料庫(小鼠物種,UniProt)的MASCOT搜索引擎來進行序列分析,使用的參數包括:輔酶(coenzyme)、氧化(M)及磷酸化(ST,Y)的可變修飾(variable modification of oxidization)、強度比截止值(intensity ratio cutoff)10%、誤差(tolerance)±0.002Da、質量誤差(mass tolerance)±10ppm。所鑑別出的序列之MS質譜會再進一步透過人工方式檢查確認。 A system using a Q Exactive mass spectrometer (Thermo Scientific, USA) with an Ultimate 3000 RSLC system (Dionex) was used for sequencing HLA peptides. A reverse phase column (C18, Acclaim pepmap RSLC, 75 μm×150 mm, pore size 2 μm, Dionex) was used to separate the composite peptide mixture. The mobile phase was prepared as follows: A: 0.1% formic acid (FA) in 5% acetonitrile (ACN) (V/V); and B: 0.1% FA in 95% ACN (V/V). The present invention designs a linear gradient, which starts from 1% B to 25% B within 40 minutes, and then increases to 80% B within 18 minutes to elute all analytes in the column. Mass spectrometry scans were performed in the range of m/z 300-2000, and the 10 strongest ions from the mass spectrometry scans were fragmented to obtain MS/MS (tandem MS) mass spectra. Use the software (Proteome Discoverer 1.3) to convert the MS raw data into a peak list. Use the MASCOT search engine with a self-built database (mouse species, UniProt) for sequence analysis. The parameters used include: coenzyme, oxidation (M) and phosphorylation (ST, Y) variable modification ( variable modification of oxidization), intensity ratio cutoff 10%, tolerance ±0.002Da, mass tolerance ±10ppm. The MS mass spectrum of the identified sequence will be further checked and confirmed manually.

6.MHC結合預測 6. MHC binding prediction

使用SYFPEITHI演算法和IEDB分析資源NetMHC(IEDB analysis resource NetMHC)(4.0版本)工具(31-33)進行第1類MHC(MHC class I)結合預測,使用參數包括如下:HLA-A*02:01的人類等位基因(human allele)、H2-Db的小鼠等位基因以及8-12個胺基酸長度的胜肽。 Use the SYFPEITHI algorithm and the IEDB analysis resource NetMHC (IEDB analysis resource NetMHC) (4.0 version) tool (31-33) to carry out the combined prediction of MHC class I (MHC class I). The parameters used include the following: HLA-A*02:01 Human alleles of H2-Db, mouse alleles of H2-Db, and peptides of 8-12 amino acids in length.

7.T2細胞的穩定性分析 7. Stability analysis of T2 cells

如先前文獻(Schweitizer S et al.,2000,Cytometry 41:271-278)所述,可藉由T2細胞穩定性分析評估胜肽和HLA-A2分子之間的結合親和力。簡單來說,將HLA-A*02:01陽性、TAP缺陷型T2細胞(ATCC)與10μM候選胜肽共同孵育在DMEM培養基中,該培養基含有0.1% FBS、5×10-5M β-巰基乙醇(β-mercaptoethanol)、5×10-7M β2-微球蛋白(β2-microglobulin),並在25℃、5%CO2的培養箱中培養過夜。合成胜肽是從國家衛生研究院核心設施所獲得(純度>95%)。將胜肽與T2細胞在37℃下孵育3小時,然後用PE共軛的抗HLA-A*02:01抗體(BB7.2,BD Bioscience,USA)進行染色。透過流式細胞儀(FACSCalibur,BD Bioscience,USA)監測穩定的胜肽-HLA-A*02:01和β2-微球蛋白複合體(pHLA-A2)的量。根據胜肽脈衝T2細胞的平均螢光強度((Mean Fluorescence Intensity,MFI)來決定親和力。在此分析中,分別應用VYCKQQLLR(SEQ ID NO:3,VYC)(HLA-A11抗原決定位)和YMLDLQPETT(SEQ ID NO:4,YML)(HLA-A2抗原決定位)的合成胜肽作為陰性和陽性對照組。 As described in previous documents (Schweitizer S et al., 2000, Cytometry 41:271-278), the binding affinity between peptides and HLA-A2 molecules can be assessed by T2 cell stability analysis. To put it simply, HLA-A*02:01-positive, TAP-deficient T2 cells (ATCC) and 10μM candidate peptides are incubated in DMEM medium containing 0.1% FBS, 5×10 -5 M β-sulfhydryl Ethanol (β-mercaptoethanol), 5×10 -7 M β2-microglobulin (β2-microglobulin), and incubate overnight in a 25°C, 5% CO 2 incubator. The synthetic peptide is obtained from the core facility of the National Institutes of Health (purity>95%). The peptides and T2 cells were incubated at 37°C for 3 hours, and then stained with PE-conjugated anti-HLA-A*02:01 antibody (BB7.2, BD Bioscience, USA). The amount of stable peptide-HLA-A*02:01 and β2-microglobulin complex (pHLA-A2) was monitored by flow cytometry (FACSCalibur, BD Bioscience, USA). The affinity is determined based on the average fluorescence intensity (Mean Fluorescence Intensity, MFI) of peptide-pulsed T2 cells. In this analysis, VYCKQQLLR (SEQ ID NO: 3, VYC) (HLA-A11 epitope) and YMLDLQPETT are used respectively (SEQ ID NO: 4, YML) (HLA-A2 epitope) synthetic peptides were used as negative and positive controls.

8.IFN-γ分泌分析 8. IFN-γ secretion analysis

本發明是使用先前文獻(Tu SH et al.,2012,Journal of immunotherapy 35:235-244)所教示的方法進行一些修改,透過使用酶聯免疫斑點法(ELISPOT)分析胜肽特異性T細胞反應。為了增強胜肽免疫性(immunogenicity),將等量的CD4輔助性T細胞(CD4 helper T cell,Th) 抗原決定位(AKFVAAWTLKAAA(SEQ ID NO:5),PADRE)與不完全弗氏佐劑(incomplete Freund’s adjuvant,IFA)溶液(含50%不完全弗氏佐劑在PBS緩衝液)中的標靶胜肽進行混合,而最終胜肽濃度為1mg/mL。VYCKQQLLR(SEQ ID NO:3)(VYC)和YMLDLQPETT(SEQ ID NO:4)(YML)的合成胜肽分別作為分析中的陰性和陽性對照組。然後在第0天和第7天將50μL製備好的免疫原注射到小鼠足掌中。在最後一次免疫作用的後一周,總共收集5×105個淋巴結細胞,將細胞與胜肽(最終濃度:5μg/ml)於完整RPMI培養基中在37℃及5% CO2下共同孵育48小時。孵育後,用PBST緩衝液洗滌細胞,然後依次向孔盤中加入50μL生物素共軛的抗IFN-γ抗體(R46A2,eBioscience,CA)溶液和鏈黴素共軛HRP(eBioscience)。用3-胺基-9-乙基咔唑溶液(3-amine-9-ethyl carbazole)(ACE,Sigma)顯色墨點,然後使用ELISOT讀數器(Cellular Technology Ltd.,Shaker Heights,OH)計算墨點的數量。 The present invention uses the method taught in the previous literature (Tu SH et al., 2012, Journal of immunotherapy 35: 235-244) with some modifications, by using enzyme-linked immunospot assay (ELISPOT) to analyze peptide-specific T cell responses . In order to enhance peptide immunity (immunogenicity), the same amount of CD4 helper T cell (CD4 helper T cell, Th) epitope (AKFVAAWTLKAAA (SEQ ID NO: 5), PADRE) and incomplete Freund’s adjuvant ( The target peptide in incomplete Freund's adjuvant (IFA) solution (containing 50% incomplete Freund's adjuvant in PBS buffer) was mixed, and the final peptide concentration was 1 mg/mL. The synthetic peptides of VYCKQQLLR (SEQ ID NO: 3) (VYC) and YMLDLQPETT (SEQ ID NO: 4) (YML) were used as the negative and positive control groups in the analysis, respectively. Then 50 μL of the prepared immunogen was injected into the mouse paw on day 0 and day 7. A week after the last immunization, a total of 5×10 5 lymph node cells were collected, and the cells and peptides (final concentration: 5μg/ml) were incubated in complete RPMI medium at 37°C and 5% CO 2 for 48 hours . After incubation, the cells were washed with PBST buffer, and then 50 μL of biotin-conjugated anti-IFN-γ antibody (R46A2, eBioscience, CA) solution and streptomycin-conjugated HRP (eBioscience) were sequentially added to the well. Use 3-amine-9-ethyl carbazole solution (ACE, Sigma) to develop ink dots, and then use ELISOT reader (Cellular Technology Ltd., Shaker Heights, OH) to calculate The number of ink dots.

9.細胞內染色 9. Intracellular staining

從胜肽免疫後的AAD轉殖基因小鼠收集脾臟細胞(5×106),並與相對應的免疫原(最終濃度:10μg/ml)於37℃及5% CO2下共同孵育過夜。孵育過後,用冰的PBS洗滌細胞一次,並用FITC-共軛的單克隆抗小鼠CD8抗體(53-6.7,BD)進行染色。將FITC標記的細胞用4%多聚甲醛(paraformaldehyde)固定,用0.1%皂素(saponin)/PBS透化(permeabilization)5分鐘,然後去除上清液。用PECy7-共軛的抗小鼠IFN-γ(R3-34,BD)檢測細胞內細胞因子染色情況,然後藉由流式細胞儀 (BD Bioscience)測定染色細胞的數目。使用FCS Express軟體(De Novo Software)進行數據分析。 Spleen cells (5×10 6 ) were collected from the peptide-immunized AAD transgenic mice, and incubated with the corresponding immunogen (final concentration: 10 μg/ml) at 37° C. and 5% CO 2 overnight. After incubation, the cells were washed once with ice PBS, and stained with FITC-conjugated monoclonal anti-mouse CD8 antibody (53-6.7, BD). FITC-labeled cells were fixed with 4% paraformaldehyde, permeabilized with 0.1% saponin/PBS for 5 minutes, and then the supernatant was removed. PECy7-conjugated anti-mouse IFN-γ (R3-34, BD) was used to detect intracellular cytokine staining, and then the number of stained cells was determined by flow cytometry (BD Bioscience). Use FCS Express software (De Novo Software) for data analysis.

10.體內嗜殺分析 10. Bloodthirsty analysis in vivo

從AAD轉殖基因小鼠收集脾臟細胞(5×107),然後與KLIpSVETDI(此處p代表S(絲胺酸,Serine)的位置被磷酸化)(SEQ ID NO:6)(KLIpS,pS551-TRAP1548-556)(5μg/ml)或PBS(未經處理的對照組)在37℃下共同孵育30分鐘。孵育後,於37℃下,分別使用10μM和1μM濃度的CFSE(Molecular Probes,Eugene,OR)標記胜肽脈衝的脾臟細胞和未經處理的對照組15分鐘。然後加入冰冷的完全RPMI培養基以終止CFSE標記反應。將非胜肽脈衝細胞和胜肽脈衝的脾臟細胞以1:1的比例混合,並將總共2×107個CFSE標記的細胞透過尾靜脈注射到用胜肽免疫後的AAD轉殖基因小鼠內。在過繼轉移(adoptive transfer)後18小時,收集脾臟細胞並透過流式細胞儀(BD Bioscience)進行分析。使用FCS Express軟體(De Novo Software)進行數據分析。 Spleen cells (5×10 7 ) were collected from AAD transgenic mice, and then combined with KLIpSVETDI (where p represents the position of S (serine, Serine) is phosphorylated) (SEQ ID NO: 6) (KLIpS, pS551 -TRAP1548-556) (5μg/ml) or PBS (untreated control group) incubated together at 37°C for 30 minutes. After incubation, the peptide-pulsed spleen cells and the untreated control group were labeled with CFSE (Molecular Probes, Eugene, OR) at a concentration of 10 μM and 1 μM at 37° C. for 15 minutes. Then add ice-cold complete RPMI medium to stop the CFSE labeling reaction. Mix non-peptide-pulsed cells and peptide-pulsed spleen cells at a ratio of 1:1, and inject a total of 2×10 7 CFSE-labeled cells through the tail vein into AAD-transgenic mice immunized with peptides Inside. 18 hours after adoptive transfer, spleen cells were collected and analyzed by flow cytometry (BD Bioscience). Use FCS Express software (De Novo Software) for data analysis.

11.腫瘤攻擊分析 11. Tumor attack analysis

(1)將2×105個TC1/AAD細胞接種到週齡為6-8週的AAD轉殖基因小鼠以建立腫瘤發展。腫瘤注射後一周,在第7天和第14天將用含有PADRE的免疫強化溶液(immuno-enhanced solution)IFA所配製的50μg胜肽透過小鼠足掌注射到患有腫瘤的小鼠內,注射兩次以誘發免疫反應。另外,用PBS緩衝液誘發患有腫瘤的小鼠(數量為5)的免疫反應,在分析中作為未經處理的對照組。藉由卡尺觸診以監測腫瘤大小,每周兩 次;並計算腫瘤體積,計算公式:長度×寬度×寬度/2。當腫瘤大小超過2000mm3時,將該患有腫瘤小鼠犧牲。 (1) Inoculate 2×10 5 TC1/AAD cells into AAD transgenic mice 6-8 weeks old to establish tumor development. One week after tumor injection, 50μg peptide prepared with immuno-enhanced solution IFA containing PADRE will be injected into the tumor-bearing mice through the mouse paw on the 7th and 14th days. Twice to induce an immune response. In addition, PBS buffer was used to induce the immune response of tumor-bearing mice (the number is 5) and served as an untreated control group in the analysis. The tumor size was monitored by palpation with calipers twice a week; the tumor volume was calculated by the formula: length×width×width/2. When the tumor size exceeds 2000 mm 3 , the mice bearing the tumor are sacrificed.

(2)在第0天和第7天,用50μg以IFA所配製KLIpS和PADRE使AAD轉殖基因小鼠產生免疫反應。SCID小鼠在第7天皮下接種1×107個H2981人類肺癌細胞株。在第14天,分別從注射PBS的AAD小鼠或免疫後的AAD小鼠的體內收集脾臟細胞,並藉由細胞分選裝置(Magnetic-activated cell sorting,MACS)分選出CD8+ T細胞。藉由靜脈內注射方式將CD8+ T細胞過繼轉移至患有H2981腫瘤的SCID小鼠。透過游標尺測量腫瘤大小,並且每週監測3次,直至腫瘤大小生長至2000mm3(2) On day 0 and day 7, 50 μg of KLIpS and PADRE prepared with IFA were used to make AAD transgenic mice produce immune responses. SCID mice were subcutaneously inoculated with 1×10 7 H2981 human lung cancer cell lines on the 7th day. On the 14th day, spleen cells were collected from the bodies of AAD mice injected with PBS or immunized AAD mice, and CD8 + T cells were sorted by a cell sorting device (Magnetic-activated cell sorting, MACS). CD8 + T cells were adoptively transferred to SCID mice with H2981 tumor by intravenous injection. The size of the tumor was measured by a vernier and monitored 3 times a week until the tumor size grew to 2000mm 3 .

12.51Cr釋放分析 12. 51 Cr release analysis

使用CD8+ T細胞分離試劑盒(Miltenyl Biotech)將CD8+ T細胞從用KLIpS免疫的小鼠之脾臟中分離出來。當標靶細胞時,將H2981細胞(5×105/ml)用100μCi的51Cr(Na251CrO4,PerkinElmer,MA)在37℃下標記1小時,以作為標靶細胞。然後將CD8+ T細胞(5×105)與51Cr標記的標靶細胞(5×103)以100:1(效應物:靶標,E:T)的比例混合,並在37℃下孵育18小時。孵育過後,收穫上清液,並使用γ計數器測量放射性。使用下式以計算特異性裂解(lysis)的百分比:100×[(實驗釋放-自發性釋放)/(最大釋放-自發性釋放)]。 CD8 + T cell isolation kit (Miltenyl Biotech) was used to isolate CD8 + T cells from the spleen of mice immunized with KLIpS. When targeting cells, H2981 cells (5×10 5 /ml) were labeled with 100 μCi of 51 Cr (Na251CrO4, PerkinElmer, MA) at 37°C for 1 hour to serve as target cells. Then CD8 + T cells (5×10 5 ) and 51 Cr-labeled target cells (5×10 3 ) were mixed at a ratio of 100:1 (effector: target, E: T), and incubated at 37°C 18 hours. After the incubation, the supernatant was harvested and the radioactivity was measured using a gamma counter. The following formula is used to calculate the percentage of specific lysis: 100×[(experimental release-spontaneous release)/(maximum release-spontaneous release)].

13.棕櫚酸酯化胜肽的製備 13. Preparation of palmitated peptides

為了合成一具有支鏈的棕櫚酸酯化胜肽(palmitoylated peptide),其含有pan HLA-DR結合抗原決定位(pan HLA-DR binding epitope,PADRE)和CTL抗原決定位(SEQ ID NO:6,KLIpS),且PADRE以及KLIpS藉由一賴胺酸(lysine,K)殘基連接,同時該賴胺酸殘基的側鏈與Pam2或Pam3接合。該pan HLA-DR結合抗原決定位也是pan-Th抗原決定位胜肽(SEQ ID NO:5)。Pam2的化學式為Cys((RS)-2,3-(棕櫚醯基氧基)-丙基)-OH(Cys((RS)-2,3-di(palmitoyloxy)-propyl)-OH);以及Pam3的化學式為N-α-棕櫚醯基-S-[2,3-雙(棕櫚醯基氧基)-2RS]-丙基]-L-半胱胺酸(N-α-Palmitoyl-S-[2,3-bis(palmitoyloxy)-(2RS)-propyl]-L-cysteine)。故該棕櫚酸酯化胜肽的結構如下所示:

Figure 107133150-A0101-12-0034-2
In order to synthesize a branched palmitoylated peptide (palmitoylated peptide), which contains pan HLA-DR binding epitope (pan HLA-DR binding epitope, PADRE) and CTL epitope (SEQ ID NO: 6, KLIpS), and PADRE and KLIpS are connected by a lysine (K) residue, and the side chain of the lysine residue is joined to Pam2 or Pam3. The pan HLA-DR binding epitope is also a pan-Th epitope peptide (SEQ ID NO: 5). The chemical formula of Pam2 is Cys((RS)-2,3-(palmitoyloxy)-propyl)-OH(Cys((RS)-2,3-di(palmitoyloxy)-propyl)-OH); and The chemical formula of Pam3 is N-α-palmitoyl-S-[2,3-bis(palmitoyloxy)-2RS]-propyl]-L-cysteine (N-α-Palmitoyl-S- [2,3-bis(palmitoyloxy)-(2RS)-propyl]-L-cysteine). Therefore, the structure of the palmitated peptide is as follows:
Figure 107133150-A0101-12-0034-2

此外,該棕櫚酸酯化胜肽內的PADRE、KLIpS和Pam2(或Pam3)的位置皆可以互換,並且Pam2(或Pam3)也可以與其他脂肪酸進行互換。而上述互換位置的行為並不會影響棕櫚酸酯化胜肽(脂化胜肽)的作用。 In addition, the positions of PADRE, KLIpS and Pam2 (or Pam3) in the palmitate esterified peptide can all be interchanged, and Pam2 (or Pam3) can also be interchanged with other fatty acids. The above behavior of swapping positions does not affect the effect of palmitated peptides (lipidated peptides).

使用標準F-moc化學合成PADRE連接CTL抗原決定位之胜肽;該步驟執行後進行切割以產生非脂化胜肽(non-lipidated peptide);最後透過將Pam2或Pam3連接到所插入的賴胺酸殘基的胺基上以構建該棕 櫚酸酯化胜肽。故本發明使用二棕櫚酸酯化胜肽(Pam2KLIpS)以及三棕櫚酸酯化胜肽(Pam3KLIpS)進行後續實驗。 Use standard F-moc chemistry to synthesize the peptide that connects PADRE to the CTL epitope; after this step is performed, it is cleaved to produce a non-lipidated peptide; finally, connect Pam2 or Pam3 to the inserted lysine Acid residues on the amine group to construct the palmitated peptide. Therefore, the present invention uses dipalmitate peptide (Pam2KLIpS) and tripalmitate peptide (Pam3KLIpS) for subsequent experiments.

14.抗原特異性細胞的誘發測定 14. Induction assay of antigen-specific cells

在第0天和第7天,用50μg Pam2KLIpS、50μg Pam3KLIpS和一混合物(KLIpS/IFA),其包含IFA、PADRE及50μg KLIpS,來誘發AAD轉殖基因小鼠的免疫反應。在第14天,收集淋巴細胞並用5μg/ml KLIpS再刺激48小時。抗原特異性細胞是藉由KLIpS再刺激分泌IFN-γ的細胞,並進一步用ELISPOT檢測。 On day 0 and day 7, 50μg Pam2KLIpS, 50μg Pam3KLIpS and a mixture (KLIpS/IFA) containing IFA, PADRE and 50μg KLIpS were used to induce the immune response of AAD transgenic mice. On day 14, lymphocytes were collected and stimulated with 5 μg/ml KLIpS for another 48 hours. Antigen-specific cells are cells that secrete IFN-γ were stimulated by KLIpS and further detected by ELISPOT.

15.腫瘤抑制分析 15. Tumor suppression analysis

為了評估Pam2KLIpS或Pam3KLIpS的腫瘤生長抑制作用,在腫瘤接種前14和7天,用50μg Pam2KLIpS和Pam3KLIpS誘發AAD小鼠的免疫反應。在第0天用1×105TC1-AAD腫瘤細胞接種到免疫後的小鼠。用游標尺測量腫瘤大小,每週監測3次,直至腫瘤大小達到2000mm3In order to evaluate the tumor growth inhibitory effect of Pam2KLIpS or Pam3KLIpS, 50μg of Pam2KLIpS and Pam3KLIpS were used to induce immune response in AAD mice 14 and 7 days before tumor inoculation. On day 0, immunized mice were inoculated with 1×10 5 TC1-AAD tumor cells. Measure the tumor size with a vernier, and monitor 3 times a week until the tumor size reaches 2000mm 3 .

16.統計分析 16. Statistical analysis

藉由學生t檢定(Student's t-test)(雙尾)和顯著水準為5%的單因子變異數分析(ANOVA)來評估統計學上的顯著性。 The statistical significance was evaluated by Student's t-test (two-tailed) and a one-way analysis of variance (ANOVA) with a significance level of 5%.

B.結果 B. Results

1.在肺癌細胞和腫瘤中TRAP1表現程度 1. The degree of TRAP1 expression in lung cancer cells and tumors

為了評估小鼠和人類肺癌細胞株中的TRAP1表現程度,本 發明使用西方墨點法定量目標蛋白,並將其豐度與正常小鼠肺細胞中的TRAP1豐度進行比較。如圖1(A)所示,TRAP在測試的肺癌細胞中為具有顯著性的高表現程度,但在正常小鼠肺部組織中幾乎看不到,這結果與先前研究(Agorreta J et al.,2014,Mol Cancer Res 12:660-669)一致。隨後,使用抗TRAP1抗體以免疫組織化學染色法(immunohistochemistry,IHC)染色,以分析人類肺部腫瘤組織及其鄰近正常對應組織中TRAP1的豐度。在44個肺部腫瘤組織中,在17個樣本中檢測到高表現程度的TRAP1染色(17/44,38.6%)。相反地,TRAP1在鄰近的正常人類組織中幾乎檢測不到,其中只有7個樣本顯示呈陽性染色(7/44,15.9%),如表1和圖1(B)所示。所有樣本中TRAP1染色的強度由病理學家評分並總結在表1中。得分<=1為低染色;得分>1為高染色。 In order to evaluate the expression level of TRAP1 in mouse and human lung cancer cell lines, the present invention uses the Western blot method to quantify the target protein and compares its abundance with the TRAP1 abundance in normal mouse lung cells. As shown in Figure 1(A), TRAP has a significant high degree of expression in the tested lung cancer cells, but it is almost invisible in the lung tissues of normal mice. This result is consistent with previous studies (Agorreta J et al. , 2014, Mol Cancer Res 12: 660-669) consistent. Subsequently, the anti-TRAP1 antibody was stained with immunohistochemistry (IHC) to analyze the abundance of TRAP1 in human lung tumor tissues and adjacent normal corresponding tissues. Among 44 lung tumor tissues, high-level TRAP1 staining was detected in 17 samples (17/44, 38.6%). In contrast, TRAP1 was almost undetectable in adjacent normal human tissues, and only 7 samples showed positive staining (7/44, 15.9%), as shown in Table 1 and Figure 1(B). The intensity of TRAP1 staining in all samples was scored by a pathologist and summarized in Table 1. Score <=1 means low staining; score>1 means high staining.

Figure 107133150-A0101-12-0036-3
Figure 107133150-A0101-12-0036-3

2.HLA-A2結合胜肽的鑑別 2. Identification of HLA-A2 binding peptides

為了鑑別TRAP1的HLA-A2限制性抗原決定位,利用液相層析質譜(liquid chromatography mass spectrometry,LCMS)以分析 TC1/AAD細胞的免疫沉澱胜肽(immunoprecipitated peptide)。根據MASCOT的檢索,在1x109個TC1/AAD細胞中總共鑑別出11種顯著的HLA-A2限制性胜肽(HLA-A2-restricted peptide),並且透過人工檢查其相應的串聯MS質譜進一步確認它們的序列。藉由將序列輸入進美國的國家過敏和傳染病研究所(National Institute of Allergy and Infectious Diseases America)所資助的IEDB(www.IEDB.org)資料庫和Rammensee團隊發展的SYFPEITHI(www.syfpeithi.de)資料庫,所有MS所鑑別出的胜肽都符合HLA-A*02:01結合物的結合基序(motif),但不符合小鼠分子H2-Db的結合基序。KLIpSVETDI(SEQ ID NO:6)(KLIpS,pS551-TRAP1548-556,此處p代表S(絲胺酸,Serine)的位置被磷酸化)和RQLpSSGVSEI(SEQ ID NO:7)(RQLpS,pS82-HSP2779-88,此處p代表S(絲胺酸,Serine)的位置被磷酸化)分別為衍生自TRAP1_mouse(Q9CQN1,UniProt)和HSP27_mouse(P14602,UniProt)的癌症相關蛋白之磷酸化胜肽。除了人工檢查之外,透過與參考性合成胜肽的串聯MS質譜比較後,進一步證實這些磷酸化胜肽序列,如圖2和3所示。故HLA-磷酸化胜肽被認為是誘發抗原特異性T細胞的免疫原性抗原決定位,因此TRAP1衍生的磷酸化胜肽能引起免疫反應,其在治療應用將具有很高的吸引力。 In order to identify the HLA-A2 restricted epitope of TRAP1, liquid chromatography mass spectrometry (LCMS) was used to analyze immunoprecipitated peptides of TC1/AAD cells. According to the MASCOT search, a total of 11 significant HLA-A2-restricted peptides were identified in 1x10 9 TC1/AAD cells, and they were further confirmed by manual inspection of their corresponding tandem MS mass spectra the sequence of. By entering the sequence into the IEDB (www.IEDB.org) database funded by the National Institute of Allergy and Infectious Diseases America (National Institute of Allergy and Infectious Diseases America) and SYFPEITHI (www.syfpeithi.de) developed by the Rammensee team. ) In the database, all peptides identified by MS conform to the binding motif of the HLA-A*02:01 conjugate, but do not conform to the binding motif of the mouse molecule H2-Db. KLIpSVETDI (SEQ ID NO: 6) (KLIpS, pS551-TRAP1548-556, where p represents the position of S (serine, Serine) is phosphorylated) and RQLpSSGVSEI (SEQ ID NO: 7) (RQLpS, pS82-HSP2779 -88, where p represents the position of S (serine, Serine) is phosphorylated) are the phosphorylated peptides of cancer-related proteins derived from TRAP1_mouse (Q9CQN1, UniProt) and HSP27_mouse (P14602, UniProt), respectively. In addition to manual inspection, the sequence of these phosphorylated peptides was further confirmed by comparison with reference synthetic peptide tandem MS mass spectrometry, as shown in Figures 2 and 3. Therefore, HLA-phosphorylated peptides are considered to induce immunogenic epitopes of antigen-specific T cells. Therefore, TRAP1-derived phosphorylated peptides can cause immune responses, which will have high appeal in therapeutic applications.

先前研究(Proc Natl Acad Sci U S A.2006 Oct 3;103(40):14889-94.Identification of class I MHC-associated phosphopeptides as targets for cancer immunotherapy.Zarling AL,Polefrone JM,Evans AM,Mikesh LM,Shabanowitz J,Lewis ST,Engelhard VH,Hunt DF)指出Hsp27衍生的磷酸化胜肽被鑑定為人類卵巢腫瘤(human ovarian carcinoma)(cov413) 和黑色素瘤細胞(melanoma cell)(DM331)中的已知HLA-A2限制性CTL抗原決定位(圖3)。值得注意的是,RQLpS首次在肺癌細胞株中觀察到,進一步支持了該先前研究的MS的定序結果。 Previous study (Proc Natl Acad Sci US A. 2006 Oct 3; 103(40): 14889-94. Identification of class I MHC-associated phosphopeptides as targets for cancer immunotherapy. Zarling AL, Polefrone JM, Evans AM, Mikesh LM, Shabanowitz J, Lewis ST, Engelhard VH, Hunt DF) pointed out that Hsp27-derived phosphorylated peptides were identified as known HLA-in human ovarian carcinoma (cov413) and melanoma cells (DM331). A2-restricted CTL epitope (Figure 3). It is worth noting that RQLpS was first observed in lung cancer cell lines, which further supports the sequencing results of MS in this previous study.

此外,異白胺酸(Isoleucine,IlE,I)和白胺酸(Leucine,Leu,L)是結構異構體。因此,SEQ ID NO:6中的IlE或Leu可以互換。本發明使用Rammensee團隊發展的SYFPEITHI線上模擬軟體(http://www.syfpeithi.de/index.html)來測試磷酸化肽肽的結合效果,而SYFPEITHI為MHC配體(ligand)以及胜肽序列的資料庫。如表2所示,該模擬結果證實SEQ ID NO:6中胺基酸殘基的交換並不會影響磷酸化胜肽與HLA分子之間的結合親和力。 In addition, isoleucine (Isoleucine, IlE, I) and leucine (Leucine, Leu, L) are structural isomers. Therefore, IL or Leu in SEQ ID NO: 6 can be interchanged. The present invention uses the SYFPEITHI online simulation software (http://www.syfpeithi.de/index.html) developed by the Rammensee team to test the binding effect of phosphorylated peptide peptides, and SYFPEITHI is the MHC ligand (ligand) and peptide sequence database. As shown in Table 2, the simulation results confirm that the exchange of amino acid residues in SEQ ID NO: 6 does not affect the binding affinity between the phosphorylated peptide and the HLA molecule.

Figure 107133150-A0101-12-0038-4
Figure 107133150-A0101-12-0038-4

3.HLA-胜肽穩定性分析 3. HLA-peptide stability analysis

穩定的HLA-胜肽複合體對於T細胞的辨識是必須的。在本發明中使用T2細胞進行穩定性測試。T2細胞株為具有TAP缺陷,但在細胞膜上則表現空的HLA-A2分子之細胞,其可以透過置入等位基因限制性胜肽來穩定。本發明使用與非結合陰性對照組相關的pan-HLA抗體定量穩 定的HLA-A2-胜肽複合體。如圖4(A)及4(B)所示,KLIpS胜肽以及陽性對照組YMLDLQPET胜肽(YML)(一種已知的HLA-A*02:01結合物)可以在具有TAP缺陷的T2細胞中有效地與HLA-A2分子形成穩定的複合體。相反,當在測試中使用非磷酸化胜肽(KLIS,SEQ ID NO:8)或陰性對照組的VYC胜肽(HLA-A*11)進行置入時,僅檢測到幾個或更少之穩定的HLA-胜肽複合體,如圖4(A)及4(B)所示。相比之下,與磷酸鹽結合對於增強胜肽對HLA-A*02:01分子的結合親和力是至關重要的。 A stable HLA-peptide complex is necessary for T cell identification. In the present invention, T2 cells are used for stability testing. The T2 cell line is a cell with a TAP defect but an empty HLA-A2 molecule on the cell membrane, which can be stabilized by placing an allele-restricted peptide. The present invention quantifies stable HLA-A2-peptide complexes using pan-HLA antibodies related to the non-binding negative control group. As shown in Figure 4(A) and 4(B), the KLIpS peptide and the positive control YMLDLQPET peptide (YML) (a known HLA-A*02:01 conjugate) can be used in T2 cells with TAP deficiency It effectively forms a stable complex with HLA-A2 molecules. In contrast, when the non-phosphorylated peptide (KLIS, SEQ ID NO: 8) or the VYC peptide (HLA-A*11) of the negative control group was used for implantation in the test, only a few or less were detected. The stable HLA-peptide complex is shown in Figures 4(A) and 4(B). In contrast, binding to phosphate is essential for enhancing the binding affinity of the peptide to HLA-A*02:01 molecules.

4.TRAP1衍生的HLA-A2限制性磷酸化胜肽所誘發的抗原特異性CTL的免疫反應 4. Antigen-specific CTL immune response induced by TRAP1-derived HLA-A2 restricted phosphorylation peptide

基於T2細胞的測試結果,本發明評估KLIpS具有誘發T細胞的能力。本實驗係從使用胜肽免疫的C57BL/6野生型(WT)和AAD轉殖基因小鼠開始。在胜肽再刺激後,僅在胜肽免疫的AAD轉殖基因小鼠的淋巴結中檢測到高量的分泌IFN-γ的細胞,但在野生型對照組中未檢測到;這結果反應細胞因子的反應是透過AAD分子所介導的,如圖5(A)所示。接著,分別用胜肽KLIpS、KLIS、YML和VYC免疫AAD轉殖基因小鼠,以比較誘發細胞毒性T細胞的功效。在胜肽再刺激期間,ELISPOT分析顯示用胜肽KLIpS或YML(陽性對照組)免疫的AAD轉殖基因小鼠的淋巴結中出現更多數量的分泌IFN-γ的細胞(KLIpS:墨點:230±45;YML:墨點:161±81)(圖5(B))。此外,進一步進行交叉再刺激的分析,其結果顯示在圖5(C)。如圖5(C)所示,強烈的細胞因子反應僅限於胜肽KLIpS,但對於其他非磷酸化胜肽則沒有誘發免疫反應。 Based on the test results of T2 cells, the present invention evaluates the ability of KLIpS to induce T cells. This experiment started with C57BL/6 wild-type (WT) and AAD transgenic mice immunized with peptides. After peptide re-stimulation, only high amounts of IFN-γ secreting cells were detected in the lymph nodes of peptide-immunized AAD transgenic mice, but not in the wild-type control group; this result reflects cytokines The reaction is mediated through AAD molecules, as shown in Figure 5(A). Next, the AAD transgenic mice were immunized with peptides KLIpS, KLIS, YML, and VYC to compare the efficacy of inducing cytotoxic T cells. During the peptide restimulation, ELISPOT analysis showed that the lymph nodes of the AAD transgenic mice immunized with the peptide KLIpS or YML (positive control group) had a greater number of IFN-γ-secreting cells (KLIpS: ink dots: 230 ±45; YML: Ink dot: 161±81) (Figure 5(B)). In addition, further analysis of cross-restimulation was performed, and the results are shown in Figure 5(C). As shown in Figure 5(C), the strong cytokine response is limited to the peptide KLIpS, but no immune response is induced for other non-phosphorylated peptides.

此外,使用細胞內染色分析以評估細胞異質群內的細胞因子表現情況。,在固定細胞膜和高基氏體後,在KLIpS免疫的AAD轉殖基因小鼠的脾臟細胞的CD8+ T細胞群中檢測到累積的IFN-γ(KLIpS:3.7%),其在用KLIS或VYC免疫的AAD轉殖基因小鼠中則構成相對較小的分群(KLIS:0.5%;VYC:0.7%),如圖5(D)和5(E)所示。此細胞因子分泌分析證實KLIpS是一種免疫原性胜肽,其能夠藉由胜肽免疫作用誘發CD8+ T細胞的反應。 In addition, intracellular staining analysis is used to assess the performance of cytokines within a heterogeneous population of cells. After fixing the cell membrane and Gogi's body, accumulated IFN-γ (KLIpS: 3.7%) was detected in the CD8 + T cell population of the spleen cells of the KLIpS-immunized AAD transgenic mice, which was used KLIS or VYC The immunized AAD transgenic mice constituted a relatively small group (KLIS: 0.5%; VYC: 0.7%), as shown in Figures 5(D) and 5(E). This cytokine secretion analysis confirmed that KLIpS is an immunogenic peptide, which can induce CD8 + T cell responses through peptide immunity.

5.KLIpS所誘發的特異性CTL反應之細胞溶解作用 5. Cytolysis of specific CTL response induced by KLIpS

除了細胞因子對體外胜肽再刺激的反應外,本發明進一步評估KLIpS所誘發的特異性CTL反應之細胞溶解作用。對於該實驗,將等量抗原決定位脈衝(CFSEhigh)和未處理(CFSElow)脾臟細胞的混合物透過尾靜脈注射到胜肽免疫的AAD轉殖基因小鼠中。然後收集接受體(recipient)的脾臟細胞以確定總CFSE+細胞中CFSEhigh和CFSElow的百分比。CFSEhigh在此分析中作為特異性標靶細胞(specific target cell)。當KLIpS/IFA免疫作用所誘導的細胞毒性T淋巴細胞執行嗜殺反應,會造成特異性靶細胞的特異性裂解。如圖6(A)所示,在用KLIpS胜肽免疫的小鼠中,特異性標靶細胞(CFSEhigh)減少將近一半(KLIpS:48.11±18.36%)。 In addition to the cytokine response to in vitro peptide re-stimulation, the present invention further evaluates the cytolytic effect of the specific CTL response induced by KLIpS. For this experiment, a mixture of equal amounts of epitope pulsed (CFSE high ) and untreated (CFSE low ) spleen cells was injected into peptide-immunized AAD transgenic mice through the tail vein. The spleen cells of the recipient were then collected to determine the percentage of CFSE high and CFSE low in the total CFSE + cells. CFSE high is used as a specific target cell in this analysis. When the cytotoxic T lymphocytes induced by KLIpS/IFA immunity perform a killer response, specific target cells will be lysed specifically. As shown in Figure 6(A), in mice immunized with KLIpS peptide, specific target cells (CFSE high ) were reduced by nearly half (KLIpS: 48.11±18.36%).

隨後,本發明藉由鉻(51Cr)釋放測定檢查KLIpS所誘發的特異性CTL反應對H2981人類肺癌細胞株的細胞溶解作用。該細胞株是呈HLA-A2陽性,並且類似TC1/AAD細胞會大量表現的TRAP1蛋白(圖1)。當51Cr標記的H2981與小鼠效應CD8+ T細胞一起孵育時,在效應物 (effector):標靶(target)比例為100:1(E/T)下高達20%的標靶細胞裂解,如圖6(B)所示。值得注意的是,在抗CD8或抗HLA抗體的存在下,這種細胞溶解作用被顯著抑制,這表示效應T細胞溶細胞作用是透過HLA和TCR的相互作用所介導的。 Subsequently, the present invention uses the chromium ( 51 Cr) release assay to examine the cytolytic effect of the specific CTL response induced by KLIpS on the H2981 human lung cancer cell line. This cell line is HLA-A2 positive and is similar to the TRAP1 protein that TC1/AAD cells express in large quantities (Figure 1). When 51 Cr labeled H2981 is incubated with mouse effector CD8 + T cells, up to 20% of the target cells are lysed at an effector: target ratio of 100:1 (E/T). As shown in Figure 6(B). It is worth noting that in the presence of anti-CD8 or anti-HLA antibodies, this cytolysis is significantly inhibited, which means that effector T cell cytolysis is mediated through the interaction of HLA and TCR.

6.KLIpS所誘發的特異性CTL反應之抗腫瘤作用 6. Anti-tumor effect of specific CTL response induced by KLIpS

基於對癌細胞的殺傷作用,建立腫瘤攻擊模型以測試KLIpS所誘發的特異性CTL反應在腫瘤組織中的細胞溶解作用。在腫瘤攻擊分析中,用KLIS或PBS緩衝液免疫罹患腫瘤的小鼠(數量為5)均在7週時犧牲掉;相比之下,如圖7(A)及7(B)所示,KLIpS的免疫作用可以顯著減少腫瘤的生長,並延長罹患腫瘤的小鼠之存活期超過7週,這證明KLIpS作為癌症治療的治療性疫苗之功效。 Based on the killing effect on cancer cells, a tumor attack model was established to test the cytolytic effect of specific CTL responses induced by KLIpS in tumor tissues. In the tumor attack analysis, mice with tumors (number of 5) immunized with KLIS or PBS buffer were sacrificed at 7 weeks; in contrast, as shown in Figures 7(A) and 7(B), The immune function of KLIpS can significantly reduce the growth of tumors and prolong the survival period of mice suffering from tumors for more than 7 weeks, which proves the efficacy of KLIpS as a therapeutic vaccine for cancer treatment.

此外,在異種移植模型中,KLIpS免疫誘導CTL也可以抑制人類肺癌腫瘤的生長,如圖7(C)所示。此結果顯示,與沒有CD8+ T細胞過繼轉移的H2981罹患腫瘤的小鼠相比,有KLIpS所誘發的CTL反應之接受體的腫瘤生長非常緩慢。 In addition, in a xenograft model, KLIpS immunization-induced CTL can also inhibit the growth of human lung cancer tumors, as shown in Figure 7(C). This result showed that compared with H2981 tumor-bearing mice without CD8 + T cell adoptive transfer, the tumor growth of recipients with CTL response induced by KLIpS was very slow.

7.棕櫚酸酯化胜肽所誘發的抗原特異性CTL反應 7. Antigen-specific CTL response induced by palmitate peptide

脂質(Pam2或Pam3)可觸發類鐸受體2(toll-like receptor 2,TLR2)路徑以促進樹突細胞(dendritic cell,DC)成熟並增強Th1-偏向免疫反應(Th1-biased immune response)以促發CTL。此外,棕櫚酸酯化胜肽可以藉由DC以促進CTL抗原決定位交叉呈現來誘發抗腫瘤的CTL反 應。因此,本發明使用二棕櫚酸(palmitic acid)或三棕櫚酸接合物作為TLR2催動劑(agonist)和PADRE來誘發DC和輔助性T細胞(Th)的活化以促發CTL。為了增強KLIpS的免疫原性,本發明合成一棕櫚酸酯化胜肽(palmitoylated peptide),其包含PADRE和KLIpS,而上述兩者連接一賴氨酸(K)殘基,且該賴氨酸(K)殘基的側鏈與雙棕櫚酸或三棕櫚酸接合。脂質(Pam2或Pam3)部分和PADRE是二棕櫚酸酯化胜肽(Pam2KLIpS)或三棕櫚酸酯化胜肽(Pam3KLIpS)的內在佐劑。該脂化胜肽可以在沒有常規佐劑的情況下誘發抗原特異性CTL反應,像不完全弗氏佐劑(IFA)一樣。為了評估自身佐劑化的脂化胜肽的免疫原性,在第0天和第7天將AAD小鼠用50μg棕櫚酸酯化胜肽免疫。用5μg/ml KLIpS再刺激分泌IFN-γ的細胞48小時,然後透過ELISPOT分析確認。分泌IFN-γ的細胞代表KLIpS所誘發的特異性CTL。如圖8所示,此結果表明,Pam2KLIpS和Pam3KLIpS的免疫作用可以誘發KLIpS特異性T細胞以及KLIpS/IFA免疫作用的頻率。 Lipids (Pam2 or Pam3) can trigger the toll-like receptor 2 (TLR2) pathway to promote the maturation of dendritic cells (DC) and enhance the Th1-biased immune response (Th1-biased immune response). Promote CTL. In addition, palmitate peptides can induce anti-tumor CTL responses by promoting cross-presentation of CTL epitopes by DC. Therefore, the present invention uses palmitic acid or tripalmitic acid conjugate as TLR2 agonist and PADRE to induce the activation of DC and helper T cells (Th) to promote CTL. In order to enhance the immunogenicity of KLIpS, the present invention synthesizes a palmitoylated peptide, which contains PADRE and KLIpS, and the two are connected to a lysine (K) residue, and the lysine ( K) The side chain of the residue is joined to dipalmitic acid or tripalmitic acid. The lipid (Pam2 or Pam3) moiety and PADRE are intrinsic adjuvants of dipalmitate peptide (Pam2KLIpS) or tripalmitate peptide (Pam3KLIpS). The lipidated peptide can induce antigen-specific CTL responses without conventional adjuvants, like incomplete Freund's adjuvant (IFA). To assess the immunogenicity of the self-adjuvanted lipidated peptide, AAD mice were immunized with 50 μg palmitated peptide on day 0 and day 7. The cells secreting IFN-γ were stimulated again with 5μg/ml KLIpS for 48 hours, and then confirmed by ELISPOT analysis. The cells that secrete IFN-γ represent specific CTLs induced by KLIpS. As shown in Figure 8, this result indicates that the immune effects of Pam2KLIpS and Pam3KLIpS can induce KLIpS-specific T cells and the frequency of KLIpS/IFA immunity.

此外,使用轉殖基因小鼠模型評估脂化胜肽的抗腫瘤效力。圖9證實,與注射PBS緩衝液的小鼠(404.25±47.8mm3)相比,用Pam2KLIpS或Pam3KLIpS免疫的小鼠可有效抑制腫瘤生長(Pam2KLIpS:198±33.4mm3;Pam3KLIpS:46.9±24.8mm3)。這種腫瘤攻擊結果表明棕櫚酸酯化胜肽的免疫作用對於抑制腫瘤生長的效力,其可以是腫瘤治療的潛在候選疫苗。 In addition, a transgenic mouse model was used to evaluate the anti-tumor efficacy of lipidated peptides. Figure 9 demonstrates that compared with mice injected with PBS buffer (404.25±47.8mm 3 ), mice immunized with Pam2KLIpS or Pam3KLIpS can effectively inhibit tumor growth (Pam2KLIpS: 198±33.4mm 3 ; Pam3KLIpS: 46.9±24.8mm 3 ). The results of this tumor attack indicate that the immune effect of the palmitate peptide is effective in inhibiting tumor growth, and it may be a potential vaccine candidate for tumor therapy.

本發明適當的描述可以在本文未具體公開的元素或限制下實施。已被用作描述的術語並不是限制。在使用這些術語和除此之外的任 何等同物的表現和描述是沒有差別的,但應當認識到本發明內的權利是可能修改的。因此,雖然本發明已說明實施例和其他情況,本文中所公開的內容可以被本領域的技術人員進行修飾和變化,並且這樣的修改和變化被認為是在本發明的權利範圍之內。 The proper description of the present invention can be implemented under elements or limitations not specifically disclosed herein. The terms that have been used for description are not limiting. There is no difference between the performance and description of these terms and any other equivalents, but it should be recognized that the rights in the present invention may be modified. Therefore, although the present invention has described embodiments and other situations, the content disclosed herein can be modified and changed by those skilled in the art, and such modifications and changes are considered to be within the scope of the rights of the present invention.

<110> 國家衛生研究院 <110> National Institutes of Health

<120> 免疫原性胜肽及其用途 <120> Immunogenic peptides and their uses

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<170> PatentIn version 3.5 <170> PatentIn version 3.5

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<213> 人工序列 <213> Artificial sequence

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Figure 107133150-A0305-02-0046-1
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Figure 107133150-A0305-02-0046-1

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Figure 107133150-A0305-02-0047-3
<400> 2
Figure 107133150-A0305-02-0047-3

<210> 3 <210> 3

<211> 9 <211> 9

<212> PRT <212> PRT

<213> 人工序列 <213> Artificial sequence

<220> <220>

<223> 基於人類的HLA-A11所設計的胜肽 <223> A peptide designed based on human HLA-A11

<400> 3

Figure 107133150-A0305-02-0047-2
<400> 3
Figure 107133150-A0305-02-0047-2

<210> 4 <210> 4

<211> 10 <211> 10

<212> PRT <212> PRT

<213> 人工序列 <213> Artificial sequence

<220> <220>

<223> 基於人類的HLA-A2所設計的胜肽 <223> A peptide designed based on human HLA-A2

<400> 4

Figure 107133150-A0305-02-0048-4
<400> 4
Figure 107133150-A0305-02-0048-4

<210> 5 <210> 5

<211> 13 <211> 13

<212> PRT <212> PRT

<213> 人工序列 <213> Artificial sequence

<220> <220>

<223> 合成胜肽 <223> Synthetic peptide

<400> 5

Figure 107133150-A0305-02-0049-6
<400> 5
Figure 107133150-A0305-02-0049-6

<210> 6 <210> 6

<211> 9 <211> 9

<212> PRT <212> PRT

<213> 人工序列 <213> Artificial sequence

<220> <220>

<223> 基於人類的TRAP1所設計的胜肽 <223> A peptide designed based on human TRAP1

<220> <220>

<221> MOD_RES <221> MOD_RES

<222> (4)..(4) <222> (4)..(4)

<223> 磷酸化 <223> Phosphorylation

<400> 6

Figure 107133150-A0305-02-0049-5
<400> 6
Figure 107133150-A0305-02-0049-5

<210> 7 <210> 7

<211> 10 <211> 10

<212> PRT <212> PRT

<213> 人工序列 <213> Artificial sequence

<220> <220>

<223> 基於人類的HSP27所設計的胜肽 <223> A peptide designed based on human HSP27

<400> 7

Figure 107133150-A0305-02-0050-7
<400> 7
Figure 107133150-A0305-02-0050-7

<210> 8 <210> 8

<211> 9 <211> 9

<212> PRT <212> PRT

<213> 人工序列 <213> Artificial sequence

<220> <220>

<223> 基於人類的TRAP1所設計的胜肽 <223> A peptide designed based on human TRAP1

<400> 8

Figure 107133150-A0305-02-0051-8
<400> 8
Figure 107133150-A0305-02-0051-8

<210> 9 <210> 9

<211> 9 <211> 9

<212> PRT <212> PRT

<213> 人工序列 <213> Artificial sequence

<220> <220>

<223> 基於人類的TRAP1所設計的胜肽 <223> A peptide designed based on human TRAP1

<220> <220>

<221> 變異區 <221> Variation area

<222> (2)..(2) <222> (2)..(2)

<223> Xaa為白胺酸或異白胺酸 <223> Xaa is leucine or isoleucine

<220> <220>

<221> 變異區 <221> Variation area

<222> (3)..(3) <222> (3)..(3)

<223> Xaa為白胺酸或異白胺酸 <223> Xaa is leucine or isoleucine

<220> <220>

<221> MOD_RES <221> MOD_RES

<222> (4)..(4) <222> (4)..(4)

<223> 磷酸化 <223> Phosphorylation

<220> <220>

<221> 變異區 <221> Variation area

<222> (9)..(9) <222> (9)..(9)

<223> Xaa為白胺酸或異白胺酸 <223> Xaa is leucine or isoleucine

<400> 9

Figure 107133150-A0305-02-0052-9
<400> 9
Figure 107133150-A0305-02-0052-9

Claims (18)

一種胜肽,包含由Lys-X-X-Ser-Val-Glu-Thr-Asp-X(SEQ ID NO:9)所組成的胺基酸序列,其中X是白胺酸(Leu)或異白胺酸(Ile),且該絲胺酸(Ser)被磷酸化。 A peptide comprising an amino acid sequence composed of Lys-XX-Ser-Val-Glu-Thr-Asp-X (SEQ ID NO: 9), where X is leucine (Leu) or isoleucine (Ile), and the serine (Ser) is phosphorylated. 如申請專利範圍第1項所述之胜肽,其中該胺基酸序列為SEQ ID NO:6。 The peptide described in item 1 of the scope of patent application, wherein the amino acid sequence is SEQ ID NO:6. 一種組合物用於製備治療一個體上的癌症的藥物的用途,其中該組合物包含一有效劑量的胜肽,其中該胜肽包含由Lys-X-X-Ser-Val-Glu-Thr-Asp-X(SEQ ID NO:9)所組成的胺基酸序列,其中X是白胺酸(Leu)或異白胺酸(Ile),且該絲胺酸(Ser)被磷酸化。 Use of a composition for preparing a medicine for treating cancer in a body, wherein the composition comprises an effective dose of a peptide, wherein the peptide comprises Lys-XX-Ser-Val-Glu-Thr-Asp-X (SEQ ID NO: 9) An amino acid sequence composed of X is leucine (Leu) or isoleucine (Ile), and the serine (Ser) is phosphorylated. 如申請專利範圍第3項所述之用途,其中該個體為具有HLA分子為HLA-A2的個體。 The use described in item 3 of the scope of patent application, wherein the individual is an individual with an HLA molecule of HLA-A2. 如申請專利範圍第3項所述之用途,其中該癌症是由表現TRAP1的癌細胞所引起的癌症。 The use described in item 3 of the scope of patent application, wherein the cancer is caused by cancer cells expressing TRAP1. 如申請專利範圍第5項所述之用途,其中該癌症為肺癌、乳癌、卵巢癌、大腸癌或前列腺癌。 The use described in item 5 of the scope of patent application, wherein the cancer is lung cancer, breast cancer, ovarian cancer, colorectal cancer or prostate cancer. 如申請專利範圍第3項所述之用途,其中該胜肽具有誘發T細胞的免疫反應的能力,以治療癌症。 The use described in item 3 of the scope of patent application, wherein the peptide has the ability to induce T cell immune response to treat cancer. 如申請專利範圍第7項所述之用途,其中該T細胞包含第1型輔助性T 細胞(Th1)以及細胞毒性T淋巴細胞(CTL)。 The use as described in item 7 of the scope of patent application, wherein the T cells include type 1 helper T cells (Th1) and cytotoxic T lymphocytes (CTL). 一種脂化胜肽,包含一脂質、一輔助性T細胞抗原決定位以及一胜肽,其中該脂質、該輔助性T細胞抗原決定位以及該胜肽皆與一胺基酸進行連接,其中該胜肽包含由Lys-X-X-Ser-Val-Glu-Thr-Asp-X(SEQ ID NO:9)所組成的胺基酸序列,其中X是白胺酸(Leu)或異白胺酸(Ile),且該絲胺酸(Ser)被磷酸化。 A lipidated peptide comprising a lipid, a helper T cell epitope and a peptide, wherein the lipid, the helper T cell epitope and the peptide are all linked to an amino acid, wherein the The peptide contains an amino acid sequence consisting of Lys-XX-Ser-Val-Glu-Thr-Asp-X (SEQ ID NO: 9), where X is leucine (Leu) or isoleucine (Ile ), and the serine (Ser) is phosphorylated. 如申請專利範圍第9項所述之脂化胜肽,其中該脂質包含一脂肪酸。 The lipidated peptide according to claim 9, wherein the lipid contains a fatty acid. 如申請專利範圍第9項所述之脂化胜肽,其中該輔助性T細胞抗原決定位的序列包含一SEQ ID NO:5的胺基酸序列。 The lipidated peptide according to item 9 of the scope of patent application, wherein the sequence of the helper T cell epitope includes an amino acid sequence of SEQ ID NO: 5. 如申請專利範圍第9項所述之脂化胜肽,其中該胺基酸為一側鏈具有活性的官能基的胺基酸,其中該活性的官能基能與該脂質相接。 The lipidated peptide according to item 9 of the scope of patent application, wherein the amino acid is an amino acid with an active functional group on one side chain, wherein the active functional group can be connected to the lipid. 一種組合物用於製備治療一個體上的癌症的藥物的用途,其中該組合物包含一有效劑量的脂化胜肽,其中該脂化胜肽包含一脂質、一輔助性T細胞抗原決定位以及一胜肽,其中該脂質、該輔助性T細胞抗原決定位以及該胜肽皆與一胺基酸進行連接,其中該胜肽包含由Lys-X-X-Ser-Val-Glu-Thr-Asp-X(SEQ ID NO:9)所組成的胺基酸序列,其中X是白胺酸(Leu)或異白胺酸(Ile),且該絲胺酸(Ser)被磷酸化。 Use of a composition for preparing a medicine for treating cancer in a body, wherein the composition comprises an effective dose of lipidated peptide, wherein the lipidated peptide comprises a lipid, a helper T cell epitope, and A peptide, wherein the lipid, the helper T cell epitope and the peptide are all linked to an amino acid, wherein the peptide comprises Lys-XX-Ser-Val-Glu-Thr-Asp-X (SEQ ID NO: 9) An amino acid sequence composed of X is leucine (Leu) or isoleucine (Ile), and the serine (Ser) is phosphorylated. 如申請專利範圍第13項所述之用途,其中該個體為具有HLA分子為HLA-A2的個體。 The use as described in item 13 of the scope of patent application, wherein the individual is an individual with an HLA molecule of HLA-A2. 如申請專利範圍第13項所述之用途,其中該癌症是由表現TRAP1的癌細胞所引起的癌症。 The use described in item 13 of the scope of patent application, wherein the cancer is caused by cancer cells expressing TRAP1. 如申請專利範圍第15項所述之用途,其中該癌症為肺癌、乳癌、卵巢癌、大腸癌或前列腺癌。 The use described in item 15 of the scope of patent application, wherein the cancer is lung cancer, breast cancer, ovarian cancer, colorectal cancer or prostate cancer. 如申請專利範圍第13項所述之用途,其中該脂化胜肽具有誘發T細胞的免疫反應的能力,以治療癌症。 The use as described in item 13 of the scope of patent application, wherein the lipidated peptide has the ability to induce the immune response of T cells to treat cancer. 如申請專利範圍第17項所述之用途,其中該T細胞包含第1型輔助性T細胞(Th1)以及細胞毒性T淋巴細胞(CTL)。 The use described in item 17 of the scope of the patent application, wherein the T cells include type 1 helper T cells (Th1) and cytotoxic T lymphocytes (CTL).
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Non-Patent Citations (3)

* Cited by examiner, † Cited by third party
Title
Angela L. Zarling et al., "Phosphorylated peptides are naturally processed and presented by major histocompatibility complex class I molecules in vivo", J Exp Med, 2000 Dec 18;192(12):1755-62. *
David C. Jackson et al., "A totally synthetic vaccine of generic structure that targets Toll-like receptor 2 on dendritic cells and promotes antibody or cytotoxic T cell responses", Proc Natl Acad Sci U S A, 2004 Oct 26;101(43):15440-5. Epub 2004 Oct 15. *
Weiguang Zeng et al., "Highly Immunogenic and Totally Synthetic Lipopeptides as Self-Adjuvanting Immunocontraceptive Vaccines", J Immunol, 2002 Nov 1;169(9):4905-12. *

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