TW202404615A - Compositions and methods for inhibiting xanthine dehydrogenase (XDH) - Google Patents
Compositions and methods for inhibiting xanthine dehydrogenase (XDH) Download PDFInfo
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- TW202404615A TW202404615A TW112114858A TW112114858A TW202404615A TW 202404615 A TW202404615 A TW 202404615A TW 112114858 A TW112114858 A TW 112114858A TW 112114858 A TW112114858 A TW 112114858A TW 202404615 A TW202404615 A TW 202404615A
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- xdh
- dsrna
- xanthine dehydrogenase
- reagent
- nucleotides
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Abstract
本發明關於抑制黃嘌呤脫氫酶(XDH)蛋白表達的組合物和方法。具體的,本申請提供了可用於抑制黃嘌呤脫氫酶(XDH)基因表達和用於治療黃嘌呤脫氫酶(XDH)相關疾病和病症的組合物和方法。本發明還提供了可用於降低細胞和對象中黃嘌呤脫氫酶(XDH)表達的黃嘌呤脫氫酶(XDH)dsRNA試劑、及其與黃嘌呤脫氫酶(XDH)反義多核苷酸試劑和/或非黃嘌呤脫氫酶(XDH)dsRNA治療劑的組合物。The present invention relates to compositions and methods for inhibiting xanthine dehydrogenase (XDH) protein expression. Specifically, the present application provides compositions and methods useful for inhibiting xanthine dehydrogenase (XDH) gene expression and for treating xanthine dehydrogenase (XDH)-related diseases and disorders. The present invention also provides xanthine dehydrogenase (XDH) dsRNA reagents that can be used to reduce xanthine dehydrogenase (XDH) expression in cells and subjects, and xanthine dehydrogenase (XDH) antisense polynucleotide reagents and/or compositions of non-xanthine dehydrogenase (XDH) dsRNA therapeutics.
Description
本發明關於可用於抑制黃嘌呤脫氫酶(XDH)的組合物和方法。The present invention relates to compositions and methods useful for inhibiting xanthine dehydrogenase (XDH).
尿酸(在本文中也稱為尿酸鹽)是內源性和飲食性嘌呤代謝的最終代謝產物。黃嘌呤氧化酶(在本文中也稱為“XO”)(EC 1.1.3.22)和黃嘌呤脫氫酶(在本文中也稱為“XDH”)(EC 1.17.1.4)分別可催化次黃嘌呤氧化為黃嘌呤和黃嘌呤氧化為尿酸。這些酶是含鉬蝶呤的黃素蛋白,由約145 kDa的兩個相同亞基組成。這些酶來自哺乳動物,包括人,以脫氫酶形式合成,但是可以通過巰基殘基的氧化或蛋白水解容易地轉化為氧化酶形式。XDH主要在腸和肝中表達,但也可以在其他組織(包括脂肪組織)中表達。Uric acid (also referred to as urate in this article) is the final metabolite of endogenous and dietary purine metabolism. Xanthine oxidase (also referred to herein as "XO") (EC 1.1.3.22) and xanthine dehydrogenase (also referred to herein as "XDH") (EC 1.17.1.4) respectively catalyze hypoxanthine Oxidation to xanthine and xanthine to uric acid. These enzymes are molybdopterin-containing flavoproteins composed of two identical subunits of approximately 145 kDa. These enzymes are derived from mammals, including humans, and are synthesized as dehydrogenases but can be readily converted to oxidase forms by oxidation or proteolysis of sulfhydryl residues. XDH is primarily expressed in the intestine and liver, but can also be expressed in other tissues, including adipose tissue.
慢性血清尿酸升高(慢性高尿酸血症),通常定義為血清尿酸鹽水平高於6.8 mg / dl(大於360 mmol / dl),超過該水平時,其生理飽和度閾值被超過(Mandell, Cleve.Clin.Med. 75:S5-S8, 2008)與許多疾病有關,例如痛風,其特徵在於急性炎症性關節炎的反復發作,通常是由於對腎的尿酸清除不足或尿酸產生過多而引起的對關節中尿酸晶體的炎性反應所致。果糖相關的痛風與在腎臟,腸和肝臟中表達的轉運蛋白的變體相關。慢性尿酸升高還與非酒精性脂肪性肝炎(NASH),非酒精性脂肪肝疾病(NAFLD),代謝紊亂,心血管疾病,2型糖尿病以及與氧化應激,慢性低度炎症和胰島素相關的疾病有關(Xu et al., J. Hepatol. 62:1412-1419, 2015; Cardoso et al., J. Pediatr. 89:412-418, 2013; Sertoglu et al., Clin. Biochem., 47:383-388, 2014)。Chronic elevation of serum uric acid (chronic hyperuricemia), usually defined as a serum urate level above 6.8 mg/dl (greater than 360 mmol/dl) above which the physiological saturation threshold is exceeded (Mandell, Cleve . Clin. Med. 75: S5-S8, 2008) is associated with many diseases, such as gout, which is characterized by recurrent attacks of acute inflammatory arthritis, often caused by insufficient renal clearance of uric acid or excessive uric acid production. Caused by an inflammatory reaction to uric acid crystals in the joints. Fructose-related gout is associated with variants of a transporter protein expressed in the kidneys, intestines and liver. Chronic elevated uric acid is also associated with nonalcoholic steatohepatitis (NASH), nonalcoholic fatty liver disease (NAFLD), metabolic disorders, cardiovascular disease, type 2 diabetes, and conditions related to oxidative stress, chronic low-grade inflammation, and insulin Disease-related (Xu et al., J. Hepatol. 62:1412-1419, 2015; Cardoso et al., J. Pediatr. 89:412-418, 2013; Sertoglu et al., Clin. Biochem., 47:383 -388, 2014).
別嘌醇和非布索坦(Uloric®)是以XDH形式存在的酶的抑制劑,通常用於治療痛風。但是,在患有痛風的合併症,特別是腎功能下降的患者(例如由於慢性腎臟疾病或肝功能不全)中有使用禁忌。它們的使用可能會在患有代謝症候群、高血壓、血脂異常、非酒精性脂肪性肝炎(NASH)或非酒精性脂肪肝疾病(NAFLD),心血管疾病或糖尿病(1型或2型)的患者中受到限制,這是由於疾病或病狀或藥物與治療此類病狀的藥物發生不良相互作用而使器官功能受到限制導致的。Allopurinol and febuxostat (Uloric®) are inhibitors of the enzyme in the form of XDH and are commonly used to treat gout. However, there are contraindications for use in patients with comorbidities of gout, especially in patients with reduced renal function (e.g. due to chronic kidney disease or hepatic insufficiency). Their use may be limited in patients with metabolic syndrome, hypertension, dyslipidemia, nonalcoholic steatohepatitis (NASH) or nonalcoholic fatty liver disease (NAFLD), cardiovascular disease, or diabetes (type 1 or 2) Restrictions in patients that result from limitations in organ function due to a disease or condition or an adverse interaction with drugs used to treat such conditions.
當前,XDH相關疾病或病症的治療方案不能完全滿足患者的需求。因此,針對將受益於XDH基因表達降低的受試者,例如痛風的受試者,存在對其他療法的需求。Current treatment options for XDH-related diseases or conditions do not fully meet the needs of patients. Therefore, there is a need for additional therapies for subjects who would benefit from reduced expression of the XDH gene, such as those with gout.
根據本發明的一個方面,提供了用於抑制黃嘌呤脫氫酶(XDH)基因表達的雙鏈核糖核酸(dsRNA)試劑,該dsRNA試劑包含正義鏈和反義鏈,在反義鏈中的核苷酸位置2至18處包含與黃嘌呤脫氫酶(XDH)基因RNA轉錄物互補的區域,其中互補區域包含與表1-3中所列出的反義序列之一相差0、1、2或3個核苷酸的至少15個連續核苷酸,並且任選地包含靶向配體。According to one aspect of the present invention, a double-stranded ribonucleic acid (dsRNA) reagent for inhibiting xanthine dehydrogenase (XDH) gene expression is provided. The dsRNA reagent includes a sense strand and an antisense strand, and a core in the antisense strand The nucleotide positions 2 to 18 contain a region complementary to the xanthine dehydrogenase (XDH) gene RNA transcript, where the complementary region contains a difference of 0, 1, and 2 from one of the antisense sequences listed in Table 1-3 or at least 15 consecutive nucleotides of 3 nucleotides, and optionally includes a targeting ligand.
在一些實施方案中,與黃嘌呤脫氫酶(XDH)基因RNA轉錄物互補的區域包含與表1-3中所列出的反義序列之一相差不超過3個核苷酸的至少15、16、17、18或19個連續核苷酸。In some embodiments, the region complementary to the xanthine dehydrogenase (XDH) gene RNA transcript includes at least 15, 16, 17, 18 or 19 consecutive nucleotides.
在一些實施方案中,dsRNA的反義鏈與SEQ ID NO: 1的任意靶區域至少基本互補,並且在表1-3之一中提供。In some embodiments, the antisense strand of the dsRNA is at least substantially complementary to any target region of SEQ ID NO: 1 and is provided in one of Tables 1-3.
在一些實施方案中,dsRNA的反義鏈與SEQ ID NO: 1的任意靶區域完全互補並且在表1-3之一中提供。In some embodiments, the antisense strand of the dsRNA is fully complementary to any target region of SEQ ID NO: 1 and is provided in one of Tables 1-3.
在一些實施方案中,dsRNA試劑包含表1-3中所列出的任一個正義鏈序列,其中正義鏈序列與dsRNA試劑中的反義鏈序列至少基本上互補。In some embodiments, the dsRNA reagent includes any one of the sense strand sequences listed in Tables 1-3, wherein the sense strand sequence is at least substantially complementary to the antisense strand sequence in the dsRNA reagent.
在一些實施方案中,dsRNA試劑包含表1-3中列出的任一個正義鏈序列,其中正義鏈序列與dsRNA試劑中的反義鏈序列完全互補。In some embodiments, the dsRNA reagent includes any one of the sense strand sequences listed in Tables 1-3, wherein the sense strand sequence is completely complementary to the antisense strand sequence in the dsRNA reagent.
在一些實施方案中,dsRNA試劑包含表1-3中列出的任一個反義鏈序列。In some embodiments, the dsRNA reagent comprises any of the antisense strand sequences listed in Tables 1-3.
在一些實施方案中,dsRNA試劑包含表1-3中作為雙鏈體序列列出的任一個序列。In some embodiments, the dsRNA agent comprises any of the sequences listed as duplex sequences in Tables 1-3.
在一些實施方案中,dsRNA試劑包含至少一個修飾的核苷酸。In some embodiments, the dsRNA agent contains at least one modified nucleotide.
在一些實施方案中,反義鏈的所有核苷酸或基本上所有核苷酸都是修飾的核苷酸。In some embodiments, all or substantially all of the nucleotides of the antisense strand are modified nucleotides.
在一些實施方案中,正義鏈和反義鏈的所有或基本上所有核苷酸都是修飾的核苷酸。In some embodiments, all or substantially all nucleotides of the sense and antisense strands are modified nucleotides.
在一些實施方案中,至少一種修飾的核苷酸包括:2'-甲氧基核苷酸、2'-氟核苷酸、2'-脫氧核苷酸、2',3'-seco核苷酸模擬物、鎖核苷酸、開環核酸核苷酸(unlocked nucleic acid nucleotide, UNA)、乙二醇核酸核苷酸(glycol nucleic acid nucleotide, GNA)、2'-F-阿拉伯糖核苷酸、2'-甲氧基乙基核苷酸、無鹼基核苷酸、核糖醇、反向核苷酸、反向無鹼基核苷酸、反向2'-OMe 核苷酸、反向2'-脫氧核苷酸、異甘露糖醇核苷酸、2'-氨基修飾的核苷酸、2'-烷基修飾的核苷酸、嗎啉代核苷酸和3'-OMe核苷酸、包括5'-硫代磷酸酯基團的核苷酸、或與膽固醇衍生物或十二烷酸雙癸醯胺基團連接的末端核苷酸、2'-氨基修飾的核苷酸、氨基磷酸酯或包含核苷酸的非天然鹼基。In some embodiments, at least one modified nucleotide includes: 2'-methoxy nucleotide, 2'-fluoro nucleotide, 2'-deoxy nucleotide, 2',3'-seco nucleoside Acid mimetics, locked nucleotides, unlocked nucleic acid nucleotides (UNA), glycol nucleic acid nucleotides (GNA), 2'-F-arabinose nucleotides , 2'-methoxyethyl nucleotide, abasic nucleotide, ribitol, reverse nucleotide, reverse abasic nucleotide, reverse 2'-OMe nucleotide, reverse 2'-deoxynucleotides, isomannitol nucleotides, 2'-amino modified nucleotides, 2'-alkyl modified nucleotides, morpholino nucleotides and 3'-OMe nucleosides Acids, nucleotides including 5'-phosphorothioate groups, or terminal nucleotides linked to cholesterol derivatives or dodecanoic acid didecylamide groups, 2'-amino modified nucleotides, Phosphoramidates or unnatural bases containing nucleotides.
在一些實施方案中,dsRNA試劑包括在引導鏈的5'末端處的E-乙烯基膦酸酯核苷酸。In some embodiments, the dsRNA agent includes an E-vinylphosphonate nucleotide at the 5' end of the guide strand.
在一些實施方案中,dsRNA試劑包含至少一個硫代磷酸酯核苷間鍵聯。In some embodiments, the dsRNA agent contains at least one phosphorothioate internucleoside linkage.
在一些實施方案中,正義鏈包含至少一個硫代磷酸酯核苷間鍵聯。In some embodiments, the sense strand contains at least one phosphorothioate internucleoside linkage.
在一些實施方案中,反義鏈包含至少一個硫代磷酸酯核苷間鍵聯。In some embodiments, the antisense strand contains at least one phosphorothioate internucleoside linkage.
在一些實施方案中,正義鏈包含1、2、3、4、5或6個硫代磷酸酯核苷間鍵聯。In some embodiments, the sense strand contains 1, 2, 3, 4, 5, or 6 phosphorothioate internucleoside linkages.
在一些實施方案中,反義鏈包含1、2、3、4、5或6個硫代磷酸酯核苷間鍵聯。In some embodiments, the antisense strand contains 1, 2, 3, 4, 5, or 6 phosphorothioate internucleoside linkages.
在一些實施方案中,反義鏈包含至少15個獨立地選自2'-O-甲基核苷酸和2'-氟核苷酸的修飾核苷酸,其中少於6個是2'-氟核苷酸修飾的核苷酸。在某些實施方案中,反義鏈包含3個或5個2'-氟核苷酸,優選地,反義鏈包含5個2'-氟核苷酸。In some embodiments, the antisense strand contains at least 15 modified nucleotides independently selected from 2'-O-methyl nucleotides and 2'-fluoronucleotides, of which less than 6 are 2'- Fluoronucleotide modified nucleotides. In certain embodiments, the antisense strand contains 3 or 5 2'-fluoronucleotides, preferably the antisense strand contains 5 2'-fluoronucleotides.
在一些實施方案中,正義鏈包含至少15個獨立地選自2'-O-甲基核苷酸和2'-氟核苷酸的修飾核苷酸,其中少於4個是2'-氟核苷酸修飾的核苷酸,在某些實施方案中,正義鏈包含 3 個 2'-氟核苷酸。In some embodiments, the sense strand contains at least 15 modified nucleotides independently selected from 2'-O-methyl nucleotides and 2'-fluoronucleotides, of which less than 4 are 2'-fluoronucleotides Nucleotide-modified nucleotides, in certain embodiments, the sense strand contains 3 2'-fluoronucleotides.
在一些實施方案中,反義鏈包含在從5'末端到3'末端的方向上,從反義鏈5'端第一個配對的核苷酸開始計算,反義鏈的第2、7、12、14和16位的核苷酸是2'-氟修飾的核苷酸,並且反義鏈中其他位置的每個核苷酸獨立地是非氟修飾的核苷酸。In some embodiments, the antisense strand is comprised in the direction from the 5' end to the 3' end, counting from the first paired nucleotide at the 5' end of the antisense strand, the 2nd, 7th, and 7th nucleotides of the antisense strand. Nucleotides at positions 12, 14, and 16 are 2'-fluoro modified nucleotides, and each nucleotide at other positions in the antisense strand is independently a non-fluoro modified nucleotide.
在一些實施方案中,正義鏈包含在從3'末端到5'末端的方向上,從正義鏈3'第一個配對的核苷酸開始計算,在正義鏈的位置9、11和13的核苷酸是2'-氟修飾的核苷酸,並且每個核苷酸在正義鏈中的其他位置獨立地是非氟修飾的核苷酸。In some embodiments, the sense strand includes cores at positions 9, 11, and 13 of the sense strand in a direction from the 3' end to the 5' end, counting from the first paired nucleotide 3' of the sense strand. The nucleotide is a 2'-fluoro modified nucleotide, and each nucleotide elsewhere in the sense strand is independently a non-fluoro modified nucleotide.
在一些實施方案中,反義鏈包含15個或更多個獨立地選自2'-O-甲基核苷酸和2'-氟核苷酸的修飾核苷酸,其中由反義鏈5'端起的第2、7、12、14和/或16位是2'-氟核苷酸修飾的核苷酸,其餘為2'-O-甲基核苷酸修飾的核苷酸。In some embodiments, the antisense strand contains 15 or more modified nucleotides independently selected from 2'-O-methyl nucleotides and 2'-fluoronucleotides, wherein the antisense strand consists of 5 Positions 2, 7, 12, 14 and/or 16 from the ' end are 2'-fluoro nucleotide modified nucleotides, and the rest are 2'-O-methyl nucleotide modified nucleotides.
在一些實施方案中,正義鏈包含獨立地選自 2' -O-甲基核苷酸和 2' - 氟核苷酸的 15 個或更多個修飾核苷酸,其中正義鏈從3'端第一個匹配位置起的第9、11和/或13位是2'-氟核苷酸修飾的核苷酸,其餘為2'-O-甲基核苷酸修飾的核苷酸。In some embodiments, the sense strand comprises 15 or more modified nucleotides independently selected from 2'-O-methyl nucleotides and 2'-fluoronucleotides, wherein the sense strand begins at the 3' end Positions 9, 11 and/or 13 from the first matching position are 2'-fluoronucleotide-modified nucleotides, and the remainder are 2'-O-methyl nucleotide-modified nucleotides.
在一些實施方案中,修飾的正義鏈是表2和/或表3中列出的修飾的正義鏈序列。In some embodiments, the modified sense strand is a modified sense strand sequence listed in Table 2 and/or Table 3.
在一些實施方案中,修飾的反義鏈是表2和/或表3中列出的修飾的反義鏈序列。In some embodiments, the modified antisense strand is a modified antisense strand sequence listed in Table 2 and/or Table 3.
在一些實施方案中,正義鏈與反義鏈互補或基本互補,並且互補區域的長度在16至23個核苷酸之間。在一些實施方案中,互補區域的長度為19-21個核苷酸。在一些實施方案中,互補區域的長度為14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29或30個核苷酸。In some embodiments, the sense strand is complementary or substantially complementary to the antisense strand, and the complementary region is between 16 and 23 nucleotides in length. In some embodiments, the complementary region is 19-21 nucleotides in length. In some embodiments, the complementary region is 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, or 30 nucleotides in length.
在一些實施方案中,每條鏈的長度不超過40個核苷酸。In some embodiments, each strand is no more than 40 nucleotides in length.
在一些實施方案中,每條鏈的長度不超過30個核苷酸。In some embodiments, each strand is no more than 30 nucleotides in length.
在一些實施方案中,每條鏈的長度不超過25個核苷酸。In some embodiments, each strand is no more than 25 nucleotides in length.
在一些實施方案中,每條鏈的長度不超過23個核苷酸。In some embodiments, each strand is no more than 23 nucleotides in length.
在一些實施方案中,每條鏈的長度不超過21個核苷酸。In some embodiments, each strand is no more than 21 nucleotides in length.
在一些實施方案中,dsRNA試劑包含至少一種修飾的核苷酸並且還包含一個或更多個靶向基團或連接基團。In some embodiments, a dsRNA agent contains at least one modified nucleotide and further contains one or more targeting or linking groups.
在一些實施方案中,一個或更多個靶向基團或連接基團與正義鏈綴合。在一些實施方案中,靶向基團或連接基團包括N-乙醯基-半乳糖胺(GalNAc)。In some embodiments, one or more targeting groups or linking groups are conjugated to the sense strand. In some embodiments, the targeting group or linking group includes N-acetyl-galactosamine (GalNAc).
在一些實施方案中,靶向基團或連接基團如式(X)所示的結構,包括靶向部分、鏈接鍵以及接頭W,其中靶向部分選自N-乙醯基-半乳糖胺衍生物(GalNAc),其通過鏈接鍵與接頭W鏈接,接頭W具有如式(XI)所示的結構,X選自O、NH 2或者S,Y ﹣選自:O ﹣、S ﹣、甲基或者NR aR b,R a和R b分別獨立的選自氫、取代或者未取代的C 1-C 6的烷基、取代或者未取代的C 3-C 6的環烷基,或者R a和R b與附著的原子一起鏈接形成含有1-3個N、O、S雜原子組成的3-12元雜環烷基。在一些優選的實施例中,取代或者未取代的C 1-C 6的烷基、取代或者未取代的C 3-C 6的環烷基中,所述的取代基選自羥基、氨基。 式(X) (式XI)。 In some embodiments, the targeting group or linking group is a structure represented by formula (X), including a targeting moiety, a linker, and a linker W, wherein the targeting moiety is selected from N-acetyl-galactosamine Derivative (GalNAc), which is linked to the linker W through a linking bond. The linker W has a structure shown in formula (XI), X is selected from O, NH 2 or S, Y - is selected from: O - , S - , A group or NR a R b , R a and R b are independently selected from hydrogen, substituted or unsubstituted C 1 -C 6 alkyl group, substituted or unsubstituted C 3 -C 6 cycloalkyl group, or R a and R b are linked together with the attached atoms to form a 3-12 membered heterocycloalkyl group containing 1-3 N, O, S heteroatoms. In some preferred embodiments, in the substituted or unsubstituted C 1 -C 6 alkyl group or the substituted or unsubstituted C 3 -C 6 cycloalkyl group, the substituent is selected from hydroxyl and amino. Formula (X) (Formula XI).
在一些實施方案中,靶向基團中的鏈接鍵選自聚乙二醇、任選取代的C 2-C 12烷基、取代或者未取代的C 3-C 12環烷基、取代或者未取代的C 3-C 12雜環烷基、取代或者未取代的C 3-C 12醯胺。在一些實施方案中,取代或者未取代的C 2-C 12烷基、取代或者未取代的C 3-C 12環烷基、取代或者未取代的C 3-C 12雜環烷基、取代或者未取代的C 3-C 12醯胺中,所述的取代基選自羥基、羰基。 In some embodiments, the linkage in the targeting group is selected from polyethylene glycol, optionally substituted C 2 -C 12 alkyl, substituted or unsubstituted C 3 -C 12 cycloalkyl, substituted or unsubstituted Substituted C 3 -C 12 heterocycloalkyl, substituted or unsubstituted C 3 -C 12 amide. In some embodiments, substituted or unsubstituted C 2 -C 12 alkyl, substituted or unsubstituted C 3 -C 12 cycloalkyl, substituted or unsubstituted C 3 -C 12 heterocycloalkyl, substituted or In unsubstituted C 3 -C 12 amide, the substituent is selected from hydroxyl and carbonyl.
在一些實施方案中,靶向基團中的鏈接鍵優選自以下片段: 、 、 、 、 、 和 , 其中每個m獨立的為1-6的整數,每個n、o、p獨立的為0或者1,每個q 1與q 2分別獨立的為0、1或者2。 In some embodiments, the linkage in the targeting group is preferably from the following fragments: , , , , , and , where each m is independently an integer from 1 to 6, each n, o, p is independently 0 or 1, and each q 1 and q 2 are independently 0, 1 or 2.
在一些實施方案中,靶向基團中的鏈接鍵更優選自以下片段: 、 、 、 、 、 。 In some embodiments, the linkage in the targeting group is more preferably from the following fragments: , , , , , .
在一些實施方案中,靶向基團中的靶向部分具有為以下結構片段, n’為1或者2。 In some embodiments, the targeting moiety in the targeting group has the following structural fragment, n' is 1 or 2.
在一些實施方案中,靶向基團具有以下結構:
在一些實施方案中,dsRNA試劑包含與正義鏈的5'-末端綴合的靶向基團。In some embodiments, the dsRNA agent comprises a targeting group conjugated to the 5'-end of the sense strand.
在一些實施方案中,dsRNA試劑包含與正義鏈的3'-末端綴合的靶向基團。In some embodiments, the dsRNA agent comprises a targeting group conjugated to the 3'-end of the sense strand.
在一些實施方案中,反義鏈在3'-末端包含一個反向無鹼基殘基。In some embodiments, the antisense strand contains an inverted abasic residue at the 3'-end.
在一些實施方案中,正義鏈在3'或/和5'末端包含一個或兩個反向無鹼基殘基。In some embodiments, the sense strand contains one or two reverse abasic residues at the 3' or/and 5' end.
在一些實施方案中,正義鏈在3'或/和5'末端包含一個或兩個imann殘基。In some embodiments, the sense strand contains one or two imann residues at the 3' or/and 5' end.
在一些實施方案中,正義鏈的3’和5’末端各自獨立地包含一個imann殘基。In some embodiments, the 3' and 5' ends of the sense strand each independently comprise an imann residue.
在一些實施方案中,dsRNA試劑具有兩個平末端。In some embodiments, the dsRNA agent has two blunt ends.
在一些實施方案中,至少一條鏈包含至少1個核苷酸長的3'突出端。在一些實施方案中,至少一條鏈包含至少2個核苷酸長的3'突出端。在一個實施例中,正義鏈在3’‑末端和/或5’‑末端具有1‑10個核苷酸突出端,如1、2、3、4、5、6、7、8、9、或10個核苷酸的突出端。In some embodiments, at least one strand includes a 3' overhang that is at least 1 nucleotide long. In some embodiments, at least one strand includes a 3' overhang that is at least 2 nucleotides long. In one embodiment, the sense strand has a 1-10 nucleotide overhang at the 3'-end and/or 5'-end, such as 1, 2, 3, 4, 5, 6, 7, 8, 9, or a 10-nucleotide overhang.
本發明的另一個方面,提供了抑制黃嘌呤脫氫酶(XDH)基因表達的雙鏈核糖核酸(dsRNA)試劑,該dsRNA試劑包含正義鏈和反義鏈,其中每條鏈的長度是14個至30個核苷酸,在反義鏈中的核苷酸位置2至18處包含與 黃嘌呤脫氫酶(XDH)基因RNA轉錄物互補的區域,其中互補區域包含與式I中所列出的雙鏈核糖核酸(dsRNA)試劑反義序列之一相差0、1、2或3個核苷酸的至少15個連續核苷酸,並且任選地包含靶向配體。Another aspect of the present invention provides a double-stranded ribonucleic acid (dsRNA) reagent for inhibiting xanthine dehydrogenase (XDH) gene expression. The dsRNA reagent includes a sense strand and an antisense strand, wherein the length of each strand is 14 to 30 nucleotides, containing a region complementary to the xanthine dehydrogenase (XDH) gene RNA transcript at nucleotide positions 2 to 18 in the antisense strand, wherein the complementary region contains those listed in Formula I One of the double-stranded ribonucleic acid (dsRNA) reagent antisense sequences differs by at least 15 contiguous nucleotides by 0, 1, 2, or 3 nucleotides, and optionally includes a targeting ligand.
所述雙鏈核糖核酸(dsRNA)試劑反義鏈如式I所示: 5’ -N a-(A 1A 2A 3A 4) i-N b–(B 1B 2B 3B 4) -N b-(C 1C 2C 3C 4C 5) j-N a- 3’ (式I) 其中:i和 j各自獨立地選自0或1; 每個 N a和 N b分別獨立的代表 0-17寡核苷酸,所述寡核苷酸可選地被本文所用化學修飾進行修飾;優選的,所述化學修飾選自2'-OMe或2'-氟修飾; A 1A 2A 3A 4表示四個連續的核苷酸依次被代表小寫2'-OMe、大寫2'-氟、小寫2'-OMe、小寫2'-OMe修飾的一個基序,優選的A 1與A 2之間、A 2與A 3之間進一步均包含硫代磷酸核苷間鍵聯; B 1B 2B 3B 4表示四個連續的核苷酸依次被1個大寫2'-氟,和連續3個小寫2'-OMe修飾的一個基序; C 1C 2C 3C 4C 5表示五個連續的核苷酸均被小寫2'-OMe修飾的的一個基序,優選的C 3與C 4之間、 C 4與C 5之間進一步包含硫代磷酸酯核苷間鍵聯。 The antisense strand of the double-stranded ribonucleic acid (dsRNA) reagent is shown in formula I: 5'-N a -(A 1 A 2 A 3 A 4 ) i -N b – (B 1 B 2 B 3 B 4 ) -N b -(C 1 C 2 C 3 C 4 C 5 ) j -N a - 3' (Formula I) Where: i and j are each independently selected from 0 or 1; each N a and N b are independently selected represents 0-17 oligonucleotide, the oligonucleotide is optionally modified by the chemical modification used herein; preferably, the chemical modification is selected from 2'-OMe or 2'-fluoro modification; A 1 A 2 A 3 A 4 represents a motif in which four consecutive nucleotides are sequentially modified by representing lower case 2'-OMe, upper case 2'-fluoro, lower case 2'-OMe, and lower case 2'-OMe. Preferred A 1 and Between A 2 and between A 2 and A 3 further contain phosphorothioate internucleoside linkages; B 1 B 2 B 3 B 4 means four consecutive nucleotides are successively replaced by 1 capital 2'-fluoro, and a motif modified by three consecutive lowercase 2'-OMe; C 1 C 2 C 3 C 4 C 5 represents a motif in which five consecutive nucleotides are modified by lowercase 2'-OMe, preferably C Phosphorothioate internucleoside linkages are further included between 3 and C4 , and between C4 and C5 .
在一些實施例中, N a分別獨立的代表0-2個寡核苷酸, N b分別獨立的代表2-5個經過或未經過本文所用化學修飾的寡核苷酸。 In some embodiments, N a independently represents 0-2 oligonucleotides, and N b independently represents 2-5 oligonucleotides with or without chemical modification as used herein.
在一些實施例中, N a分別獨立的代表0個寡核苷酸, N b分別獨立的代表2-5個經本文所用化學修飾的寡核苷酸。 In some embodiments, Na each independently represents 0 oligonucleotides, and N b each independently represents 2-5 oligonucleotides chemically modified as used herein.
在一些實施例中, N a分別獨立的代表0個寡核苷酸, N b分別獨立的代表2-5個經2'-OMe或2'-氟化學修飾的寡核苷酸。 In some embodiments, Na each independently represents 0 oligonucleotides, and N b each independently represents 2-5 oligonucleotides chemically modified with 2'-OMe or 2'-fluorine.
進一步地,在一些實施例中,式(I)進一步如式(II)所示: 5’ -xYxxxxYxxxxYxYxYxxxxx- 3’ (式II) x代表小寫2'-OMe修飾的寡核苷酸,Y代表大寫2'-氟修飾的寡核苷酸,優選的x與Y和/或x與x之間進一步包含硫代磷酸酯核苷間鍵聯。 Further, in some embodiments, formula (I) is further represented by formula (II): 5’-xYxxxxYxxxxYxYxYxxxxx- 3’ (Formula II) x represents a lowercase 2'-OMe modified oligonucleotide, and Y represents an uppercase 2'-fluoro modified oligonucleotide. Preferably, x and Y and/or x and x further include a phosphorothioate internucleoside. Key link.
進一步地,在一些實施例中,所述雙鏈核糖核酸(dsRNA)試劑正義鏈如式(III)所示: 5′-(N′ L) n′N′ LN′ LN′ LN′ N1N′ N2N′ N3N′ LN′ FN′ LN′ N4N′ N5N′ N6N′ LN′ LN′ L(N′ L) m′-3′ 式(III) 其中,N’ F代表2'-氟修飾的核苷酸;N′ N1、N′ N2、N′ N3、N′ N4、N′ N5、和 N′ N6各自分別獨立地代表一種修飾或未修飾的核苷酸;N′ N1N′ N2N′ N3和N′ N4N′ N5N′ N6各自獨立地代表一種包含至少兩種不同修飾的核苷酸片段;N′ L各自獨立地代表一種修飾或未修飾的核苷酸,所述修飾的核苷酸不是2’-氟修飾的核苷酸;m′和n′各自獨立地代表0到7整數。 Further, in some embodiments, the sense strand of the double-stranded ribonucleic acid (dsRNA) reagent is represented by formula (III): 5′-(N′ L ) n′ N′ L N′ L N′ L N′ N1 N′ N2 N′ N3 N′ L N′ F N′ L N′ N4 N′ N5 N′ N6 N′ L N′ L N′ L (N′ L ) m′ -3′ Formula (III) where, N' F represents 2'-fluoro modified nucleotide; N' N1 , N' N2 , N' N3 , N' N4 , N' N5 , and N' N6 each independently represent a modified or unmodified nucleic acid N′ N1 N′ N2 N′ N3 and N′ N4 N′ N5 N′ N6 each independently represent a nucleotide fragment containing at least two different modifications; N′ L each independently represents a modified or unmodified nucleotide fragment. Modified nucleotides that are not 2'-fluoro modified nucleotides; m' and n' each independently represent an integer from 0 to 7.
在一些實施例中,n′是1並且m′是1, 或者n′ 是1 並且m′ 是2, 或者n′是1並且m′是3, 或者n′是1並且m′是4, 或者n′是1並且m′是5, 或者n′ 是3並且m′是1, 或者n′是3並且m′ 是2, 或者n′是3並且m′是3, 或者n′是5並且m′是1。In some embodiments, n′ is 1 and m′ is 1, or n′ is 1 and m′ is 2, or n′ is 1 and m′ is 3, or n′ is 1 and m′ is 4, or n′ is 1 and m′ is 5, or n′ is 3 and m′ is 1, or n′ is 3 and m′ is 2, or n′ is 3 and m′ is 3, or n′ is 5 and m 'it's 1.
在一些實施方案中,dsRNA的反義鏈與SEQ ID NO: 1的任意靶區域至少基本互補。在一些實施方案中,dsRNA的反義鏈與SEQ ID NO: 1的任意靶區域完全互補。在一些實施方案中, dsRNA任一項所述的正義鏈序列與所述dsRNA試劑中的反義鏈序列至少基本上互補。在一些實施方案中, dsRNA任一項所述的正義鏈序列與所述dsRNA試劑中的反義鏈序列完全互補。In some embodiments, the antisense strand of the dsRNA is at least substantially complementary to any target region of SEQ ID NO: 1. In some embodiments, the antisense strand of the dsRNA is completely complementary to any target region of SEQ ID NO: 1. In some embodiments, the sense strand sequence of any one of the dsRNAs is at least substantially complementary to the antisense strand sequence in the dsRNA agent. In some embodiments, the sense strand sequence of any one of the dsRNAs is completely complementary to the antisense strand sequence in the dsRNA agent.
在一些實施方案中,與SEQ ID NO: 1互補的區域包含與表1-3中所列出的反義序列之一相差不超過3個核苷酸的至少15、16、17、18或19個連續核苷酸。In some embodiments, the region complementary to SEQ ID NO: 1 includes at least 15, 16, 17, 18, or 19 that differs by no more than 3 nucleotides from one of the antisense sequences listed in Tables 1-3 consecutive nucleotides.
在一些實施方案中,dsRNA的反義鏈與SEQ ID NO: 1的任意靶區域至少基本互補,並且在表1-3之一中提供。In some embodiments, the antisense strand of the dsRNA is at least substantially complementary to any target region of SEQ ID NO: 1 and is provided in one of Tables 1-3.
在一些實施方案中,dsRNA的反義鏈與SEQ ID NO: 1的任意靶區域完全互補並且在表1-3之一中提供。In some embodiments, the antisense strand of the dsRNA is fully complementary to any target region of SEQ ID NO: 1 and is provided in one of Tables 1-3.
在一些實施方案中,dsRNA試劑包含表1-3中所列出的任一個正義鏈序列,其中正義鏈序列與dsRNA試劑中的反義鏈序列至少基本上互補。In some embodiments, the dsRNA reagent includes any one of the sense strand sequences listed in Tables 1-3, wherein the sense strand sequence is at least substantially complementary to the antisense strand sequence in the dsRNA reagent.
在一些實施方案中,dsRNA試劑包含表1-3中列出的任一個正義鏈序列,其中正義鏈序列與dsRNA試劑中的反義鏈序列完全互補。In some embodiments, the dsRNA reagent includes any one of the sense strand sequences listed in Tables 1-3, wherein the sense strand sequence is completely complementary to the antisense strand sequence in the dsRNA reagent.
在一些實施方案中,dsRNA試劑包含表1-3中列出的任一個反義鏈序列。In some embodiments, the dsRNA reagent comprises any of the antisense strand sequences listed in Tables 1-3.
在一些實施方案中,dsRNA試劑包含表1-3中作為雙鏈體序列列出的任一個序列。In some embodiments, the dsRNA agent comprises any of the sequences listed as duplex sequences in Tables 1-3.
在一些實施方案中,正義鏈在3'或/和5'末端包含一個或兩個反向無鹼基殘基。In some embodiments, the sense strand contains one or two reverse abasic residues at the 3' or/and 5' end.
在一些實施方案中,正義鏈在3'或/和5'末端包含一個或兩個imann殘基。In some embodiments, the sense strand contains one or two imann residues at the 3' or/and 5' end.
在一些實施方案中,正義鏈的3’和5’末端各自獨立地包含一個imann殘基。In some embodiments, the 3' and 5' ends of the sense strand each independently comprise an imann residue.
在一些實施方案中,dsRNA試劑具有兩個平末端。在一些實施方案中,至少一條鏈包含至少1個核苷酸長的3'突出端。在一些實施方案中,至少一條鏈包含至少2個核苷酸長的3'突出端。在一個實施例中,正義鏈在3’‑末端和/或5’‑末端具有1‑10核苷酸突出端,如1、2、3、4、5、6、7、8、9或10個核苷酸的突出端。In some embodiments, the dsRNA agent has two blunt ends. In some embodiments, at least one strand includes a 3' overhang that is at least 1 nucleotide long. In some embodiments, at least one strand includes a 3' overhang that is at least 2 nucleotides long. In one embodiment, the sense strand has a 1-10 nucleotide overhang at the 3'-end and/or 5'-end, such as 1, 2, 3, 4, 5, 6, 7, 8, 9 or 10 nucleotide overhang.
在一些實施方案中,dsRNA試劑包含至少一種修飾的核苷酸並且還包含一個或更多個靶向基團或連接基團。在一些實施方案中,一個或更多個靶向基團或連接基團與正義鏈綴合。在一些實施方案中,靶向基團或連接基團包括N-乙醯基-半乳糖胺(GalNAc)。在一些實施方案中,靶向基團如本文所用,GLS-1、GLS-2、GLS-3、GLS-4、GLS-5、GLS-6、GLS-7、GLS-8、GLS-9、GLS-10、GLS-11、GLS-12、GLS-13、GLS-14、GLS-15、GLS-16、GLO-1、GLO-2、GLO-3、GLO-4、GLO-5、GLO-6、GLO-7、GLO-8、GLO-9、GLO-10、GLO-11、GLO-12、GLO-13、GLO-14、GLO-15和GLO-16中的任一種。In some embodiments, a dsRNA agent contains at least one modified nucleotide and further contains one or more targeting or linking groups. In some embodiments, one or more targeting groups or linking groups are conjugated to the sense strand. In some embodiments, the targeting group or linking group includes N-acetyl-galactosamine (GalNAc). In some embodiments, the targeting group is as used herein, GLS-1, GLS-2, GLS-3, GLS-4, GLS-5, GLS-6, GLS-7, GLS-8, GLS-9, GLS-10, GLS-11, GLS-12, GLS-13, GLS-14, GLS-15, GLS-16, GLO-1, GLO-2, GLO-3, GLO-4, GLO-5, GLO- 6. Any one of GLO-7, GLO-8, GLO-9, GLO-10, GLO-11, GLO-12, GLO-13, GLO-14, GLO-15 and GLO-16.
在一些實施方案中,正義鏈在3’和5’末端各自獨立地包含一個imann殘基,其中任意一個3’和5’末端殘基可選地進一步與靶向基團連接,所述靶向基團優選地為前述GLS-15。In some embodiments, the sense strand independently includes an imann residue at the 3' and 5' ends, wherein either of the 3' and 5' end residues is optionally further linked to a targeting group that targets The group is preferably the aforementioned GLS-15.
根據本發明的另一個方面,提供了一種組合物,其包含本發明上述dsRNA試劑方面的任意實施方案。According to another aspect of the invention, there is provided a composition comprising any embodiment of the above-described dsRNA agent aspect of the invention.
在某些實施方案中,組合物還包含藥學上可接受的載體。在一些實施方案中,組合物還包含一種或更多種另外的治療劑。In certain embodiments, the composition further includes a pharmaceutically acceptable carrier. In some embodiments, the composition further includes one or more additional therapeutic agents.
在某些實施方案中,組合物被包裝在藥盒、容器、包裝物、分配器、預填充注射器或小瓶中。In certain embodiments, the compositions are packaged in a kit, container, wrapper, dispenser, prefilled syringe, or vial.
在一些實施方案中,組合物被配製用於皮下給藥或被配製用於靜脈內(IV)給藥。In some embodiments, the compositions are formulated for subcutaneous administration or are formulated for intravenous (IV) administration.
根據本發明的另一方面,提供了一種細胞,其包含本發明上述dsRNA試劑方面的任意實施方案。According to another aspect of the invention, there is provided a cell comprising any embodiment of the above-described dsRNA agent aspect of the invention.
在一些實施方案中,細胞是哺乳動物細胞,任選地是人細胞。In some embodiments, the cells are mammalian cells, optionally human cells.
根據本發明的另一方面,提供了一種抑制細胞中黃嘌呤脫氫酶(XDH)基因表達的方法,該方法包括:(i)製備包含有效量的上述dsRNA試劑或上述組合物方面的任意實施方案的細胞。According to another aspect of the present invention, a method for inhibiting xanthine dehydrogenase (XDH) gene expression in cells is provided, the method comprising: (i) preparing an effective amount of the above-mentioned dsRNA reagent or any implementation of the above-mentioned composition. Program cells.
在某些實施方案中,該方法還包括:(ii)將製備的細胞維持足夠的時間以獲得黃嘌呤脫氫酶(XDH)基因的mRNA轉錄物的降解,從而抑制細胞中黃嘌呤脫氫酶(XDH)基因的表達。In certain embodiments, the method further includes: (ii) maintaining the prepared cells for a period of time sufficient to obtain degradation of the mRNA transcript of the xanthine dehydrogenase (XDH) gene, thereby inhibiting xanthine dehydrogenase in the cell (XDH) gene expression.
在一些實施方案中,細胞在對象體內並且dsRNA試劑經皮下施用於對象。In some embodiments, the cells are in the subject and the dsRNA agent is administered subcutaneously to the subject.
在一些實施方案中,細胞在對象體內並且dsRNA試劑通過IV給藥施用於對象。In some embodiments, the cells are in the subject and the dsRNA agent is administered to the subject by IV administration.
在某些實施方案中,該方法還包括在向對象施用dsRNA 試劑後評估對黃嘌呤脫氫酶(XDH)基因的抑制,其中評估的手段包括:(i) 確定對象中黃嘌呤脫氫酶(XDH)相關疾病或病症的一個或更多個生理特徵,以及(ii)將所確定的生理特徵與黃嘌呤脫氫酶(XDH)相關疾病或病症的基線治療前生理特徵和/或黃嘌呤脫氫酶(XDH)相關疾病或病症的對照生理特徵進行比較,其中的比較結果指示對象中黃嘌呤脫氫酶(XDH)基因表達的抑制存在或不存在。In certain embodiments, the method further includes assessing inhibition of the xanthine dehydrogenase (XDH) gene after administering the dsRNA agent to the subject, wherein the assessment includes: (i) determining the xanthine dehydrogenase (XDH) gene in the subject XDH)-related disease or condition, and (ii) compare the identified physiological characteristic to the baseline pre-treatment physiological characteristic and/or xanthine dehydrogenase A comparison is made between a control physiological characteristic of a xanthine dehydrogenase (XDH)-related disease or condition, where the comparison is indicative of the presence or absence of inhibition of xanthine dehydrogenase (XDH) gene expression in the subject.
在一些實施方案中,所確定的生理特徵是在血液中的尿酸水平;In some embodiments, the physiological characteristic determined is uric acid levels in the blood;
在一些實施方案中,血液中尿酸水平的降低表明對象中黃嘌呤脫氫酶(XDH)基因表達的降低。In some embodiments, a decrease in uric acid levels in the blood indicates a decrease in xanthine dehydrogenase (XDH) gene expression in the subject.
根據本發明的另一方面,提供了一種抑制對象中黃嘌呤脫氫酶(XDH)基因表達的方法,其包括向對象施用有效量的前述dsRNA試劑方面的實施方案或前述組合物的實施方案。According to another aspect of the present invention, there is provided a method for inhibiting xanthine dehydrogenase (XDH) gene expression in a subject, which includes administering to the subject an effective amount of an embodiment of the foregoing dsRNA agent or an embodiment of the foregoing composition.
在一些實施方案中,將dsRNA試劑皮下施用於對象。在某些實施方案中,dsRNA試劑通過IV給藥施用於對象。在一些實施方案中,該方法還包括:在施用dsRNA試劑後評估黃嘌呤脫氫酶(XDH)基因的抑制,其中評估手段包括:(i) 確定對象的黃嘌呤脫氫酶(XDH)相關疾病或病症的一種或更多種生理特徵;(ii)將確定的生理特徵與黃嘌呤脫氫酶(XDH)相關疾病或病症的基線治療前生理特徵和/或黃嘌呤脫氫酶(XDH)相關疾病或病症的對照生理特徵進行比較;其中比較結果指示對象中黃嘌呤脫氫酶(XDH)基因表達的抑制存在或不存在。在一些實施方案中,所確定的生理特徵是在血液中的尿酸水平。血液中尿酸水平的降低表明對象中黃嘌呤脫氫酶(XDH)基因表達的降低。In some embodiments, the dsRNA agent is administered subcutaneously to the subject. In certain embodiments, the dsRNA agent is administered to the subject via IV administration. In some embodiments, the method further includes: assessing inhibition of the xanthine dehydrogenase (XDH) gene after administration of the dsRNA agent, wherein the assessing means includes: (i) determining a xanthine dehydrogenase (XDH)-related disease in the subject or one or more physiological characteristics of a condition; (ii) correlating the identified physiological characteristics with baseline pre-treatment physiological characteristics and/or XDH of the XDH-related disease or condition Control physiological characteristics of a disease or condition are compared; wherein the comparison indicates the presence or absence of inhibition of xanthine dehydrogenase (XDH) gene expression in the subject. In some embodiments, the physiological characteristic determined is the level of uric acid in the blood. A decrease in uric acid levels in the blood indicates a decrease in xanthine dehydrogenase (XDH) gene expression in the subject.
根據本發明的另一方面,提供了一種製備治療與黃嘌呤脫氫酶(XDH)蛋白相關之疾病或病症的藥物的應用,所述藥物包含本發明的前述dsRNA試劑方面的任意實施方案或本發明的前述組合物的任意實施方案,所述藥物可以抑制黃嘌呤脫氫酶(XDH)基因表達。According to another aspect of the present invention, there is provided an application for preparing a medicament for treating diseases or conditions related to xanthine dehydrogenase (XDH) protein, the medicament comprising any embodiment of the aforementioned dsRNA reagent aspect of the invention or the present invention. In any embodiment of the aforementioned composition of the invention, the drug can inhibit xanthine dehydrogenase (XDH) gene expression.
根據本發明的另一方面,提供了一種治療與黃嘌呤脫氫酶(XDH)蛋白相關之疾病或病症的方法,其包括:向對象施用有效量的本發明的前述dsRNA試劑方面的任意實施方案或本發明的前述組合物的任意實施方案,以抑制黃嘌呤脫氫酶(XDH)基因表達。According to another aspect of the present invention, there is provided a method of treating a disease or disorder associated with xanthine dehydrogenase (XDH) protein, comprising: administering to a subject an effective amount of any embodiment of the foregoing dsRNA agent aspect of the present invention. Or any embodiment of the aforementioned composition of the invention to inhibit xanthine dehydrogenase (XDH) gene expression.
在某些實施方式中,黃嘌呤脫氫酶(XDH)相關疾病或病症選自:高尿酸血症、痛風、非酒精性脂肪性肝病(NAFLD) 、非酒精性脂肪性肝炎(NASH) 、代謝紊亂、胰島素抵抗、心血管疾病、2型糖尿病、Lesch Nyhan症候群、肝醣儲積症(GSD),例如I型GSD以及與氧化應激有關的疾病,例如慢性低度炎症;或其他XDH相關疾病。In certain embodiments, the xanthine dehydrogenase (XDH)-related disease or disorder is selected from: hyperuricemia, gout, non-alcoholic fatty liver disease (NAFLD), non-alcoholic steatohepatitis (NASH), metabolic disorders, insulin resistance, cardiovascular disease, type 2 diabetes, Lesch Nyhan syndrome, glycogen storage disorders (GSD), such as GSD type I, and diseases related to oxidative stress, such as chronic low-grade inflammation; or other XDH-related diseases.
在某些實施方案中,與XDH相關的疾病是痛風。在某些實施方案中,與XDH相關的疾病是高尿酸血症。在某些實施方案中,與XDH相關的疾病是NASH或NAFLD。In certain embodiments, the disease associated with XDH is gout. In certain embodiments, the disease associated with XDH is hyperuricemia. In certain embodiments, the disease associated with XDH is NASH or NAFLD.
在一些實施方案中,該方法還包括:向對象施用另外的治療方案。In some embodiments, the method further includes administering an additional treatment regimen to the subject.
在一些實施方案中,另外的治療方案包括黃嘌呤脫氫酶(XDH)相關疾病或病症的治療。在某些實施方案中,另外的治療方案包括:向對象施用一種或更多種本發明的黃嘌呤脫氫酶(XDH)反義多核苷酸;向對象施用非黃嘌呤脫氫酶(XDH) dsRNA治療劑;以及在對象中進行行為改變。在一些實施方案中,非黃嘌呤脫氫酶(XDH) dsRNA治療劑是以下另外的治療劑中的一種:例如,別嘌醇、羥嘌呤、非布索坦或白介素-1β(IL-1β)拮抗劑,優選地,所述白介素-1β拮抗劑選自卡那單抗或利納西普(rilonacept),從而治療將從黃嘌呤脫氫酶(XDH)減少中受益的疾病的受試者。In some embodiments, additional treatment options include treatment of xanthine dehydrogenase (XDH)-related diseases or conditions. In certain embodiments, additional treatment regimens include: administering to the subject one or more xanthine dehydrogenase (XDH) antisense polynucleotides of the invention; administering to the subject a non-xanthine dehydrogenase (XDH) dsRNA therapeutics; and effecting behavioral changes in subjects. In some embodiments, the non-xanthine dehydrogenase (XDH) dsRNA therapeutic is one of the following additional therapeutics: for example, allopurinol, hydroxypurine, febuxostat, or interleukin-1 beta (IL-1 beta) Antagonist, preferably the interleukin-1β antagonist is selected from canakinumab or rilonacept, thereby treating subjects with diseases that would benefit from a reduction in xanthine dehydrogenase (XDH).
在一些實施方案中,將dsRNA試劑皮下施用於對象。在某些實施方案中,dsRNA試劑通過IV給藥施用於對象。在一些實施方案中,該方法還包括確定所施用的雙鏈核糖核酸(dsRNA)試劑在對象中的功效。在一些實施方案中,確定治療在對象中的功效的手段包括:(i) 確定對象中黃嘌呤脫氫酶(XDH)相關疾病或病症的一種或更多種生理特徵;(ii)將確定的生理特徵與黃嘌呤脫氫酶(XDH)相關疾病或病症的基線治療前生理特徵進行比較,其中該比較結果指示對對象施用雙鏈核糖核酸(dsRNA)試劑的功效存在、不存在和水平中的一種或更多種。在一些實施方案中,所確定的生理特徵是在血液中的尿酸水平。血液中尿酸水平的降低表明對對象施用雙鏈核糖核酸(dsRNA)試劑的有效性的存在。In some embodiments, the dsRNA agent is administered subcutaneously to the subject. In certain embodiments, the dsRNA agent is administered to the subject via IV administration. In some embodiments, the method further includes determining the efficacy of the administered double-stranded ribonucleic acid (dsRNA) agent in the subject. In some embodiments, means of determining the efficacy of a treatment in a subject includes: (i) determining one or more physiological characteristics of a xanthine dehydrogenase (XDH)-related disease or disorder in the subject; (ii) converting the determined The physiological profile is compared to a baseline pre-treatment physiological profile for a xanthine dehydrogenase (XDH)-related disease or condition, wherein the comparison indicates the presence, absence, and level of efficacy of a double-stranded ribonucleic acid (dsRNA) agent administered to the subject one or more. In some embodiments, the physiological characteristic determined is the level of uric acid in the blood. A decrease in uric acid levels in the blood indicates the effectiveness of the double-stranded ribonucleic acid (dsRNA) agent administered to the subject.
根據本發明的另一方面,提供了與對象中黃嘌呤脫氫酶(XDH)蛋白的基線治療前水平相比降低對象中黃嘌呤脫氫酶(XDH)蛋白水平的方法,其包括向對象施用有效量的本發明的前述dsRNA試劑方面的任意實施方案或本發明的前述組合物的任意實施方案,以降低黃嘌呤脫氫酶(XDH)基因表達的水平。 在一些實施方案中,將dsRNA試劑皮下施用於對象或通過IV施用於對象。According to another aspect of the invention, there is provided a method of reducing xanthine dehydrogenase (XDH) protein levels in a subject as compared to baseline pre-treatment levels of xanthine dehydrogenase (XDH) protein in the subject, comprising administering to the subject An effective amount of any embodiment of the foregoing dsRNA agent aspect of the invention or any embodiment of the foregoing composition of the invention to reduce the level of xanthine dehydrogenase (XDH) gene expression. In some embodiments, the dsRNA agent is administered to the subject subcutaneously or by IV.
根據本發明的另一方面,提供了與對象中黃嘌呤脫氫酶(XDH)相關疾病或病症的基線治療前生理特徵相比改變對象中黃嘌呤脫氫酶(XDH)相關疾病或病症的生理特徵的方法,該方法包括向對象施用有效量的本發明前述dsRNA試劑方面的任意實施方案或本發明的前述組合物的任意實施方案,以改變對象中黃嘌呤脫氫酶(XDH)相關疾病或病症的生理特徵。在一些實施方案中,將dsRNA試劑皮下施用於對象或通過IV施用於對象。在一些實施方案中,所確定的生理特徵是尿酸的降低。 序列說明 According to another aspect of the invention, there is provided a change in the physiology of a xanthine dehydrogenase (XDH)-related disease or disorder in a subject as compared to baseline pre-treatment physiological characteristics of the xanthine dehydrogenase (XDH)-related disease or disorder in the subject. A characterized method comprising administering to a subject an effective amount of any embodiment of the foregoing dsRNA agent aspect of the invention or any embodiment of the foregoing composition of the invention to alter a xanthine dehydrogenase (XDH)-related disease in the subject or Physiological characteristics of the disease. In some embodiments, the dsRNA agent is administered to the subject subcutaneously or by IV. In some embodiments, the physiological characteristic determined is a reduction in uric acid. Sequence description
雙鏈體AV00206至AV00292顯示在表1中並且顯示了其正義鏈序列。Duplexes AV00206 to AV00292 are shown in Table 1 and their sense strand sequences are shown.
雙鏈體AV00206至AV00292顯示在表1中並且顯示了其反義鏈序列。Duplexes AV00206 to AV00292 are shown in Table 1 and their antisense strand sequences are shown.
SEQ ID NO: 1是人黃嘌呤脫氫酶(XDH) mRNA [NCBI 參考序列:NM_000379.4]。SEQ ID NO: 1 is human xanthine dehydrogenase (XDH) mRNA [NCBI reference sequence: NM_000379.4].
在顯示於表2的序列中,化學修飾表示為:大寫:2'-氟;小寫:2'-OMe;硫代磷酸酯:*。In the sequences shown in Table 2, chemical modifications are indicated as: uppercase: 2'-fluoro; lowercase: 2'-OMe; phosphorothioate: *.
在顯示於表3的序列中,體內研究中使用的遞送分子在每條正義鏈的3'或5'末端表示為“GLX-n”。化學修飾表示為:大寫:2'-氟;小寫:2'-OMe;硫代磷酸酯:*;Invab = 反向無鹼基;imann:在每條鏈末端時: 或當進一步偶聯遞送分子或靶向基團時: 。 In the sequences shown in Table 3, the delivery molecules used in the in vivo studies are designated "GLX-n" at the 3' or 5' end of each sense strand. Chemical modifications are represented as: uppercase: 2'-fluoro; lowercase: 2'-OMe; phosphorothioate: *; Invab = reverse abasic; imann: at the end of each chain: or when further coupled to a delivery molecule or targeting group: .
本發明的部分實施方案包括能夠抑制黃嘌呤脫氫酶(XDH)基因表達的RNAi試劑,例如但不限於雙鏈(ds)RNAi試劑。本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑可以靶向黃嘌呤脫氫酶(XDH)轉錄物,導致黃嘌呤脫氫酶(XDH)蛋白表達的抑制。本發明的部分實施方案還包括包含黃嘌呤脫氫酶(XDH)基因RNAi試劑的組合物和使用該組合物的方法。本文公開的黃嘌呤脫氫酶(XDH)基因RNAi試劑可接附於遞送化合物以遞送至細胞,包括遞送至肝細胞。本發明的藥物組合物可包含至少一種黃嘌呤脫氫酶(XDH) dsRNA試劑和遞送化合物。在本發明的一些實施方案中,遞送化合物是含GalNAc的遞送化合物。遞送至細胞的黃嘌呤脫氫酶(XDH)基因RNAi試劑能夠抑制黃嘌呤脫氫酶(XDH)基因表達,從而降低基因的黃嘌呤脫氫酶(XDH)蛋白產物在細胞中的活性。本發明的dsRNAi試劑可用於治療黃嘌呤脫氫酶(XDH)相關疾病和病症。這樣的dsRNAi試劑包括例如表1中所顯示的雙鏈體AV00206至AV00292。在一些實施方案中,優選的dsRNAi試劑包括例如雙鏈體AV00227、AV00260、AV00285、AV00266、AV00280、AV00238、AV00249、AV00289、AV00233、AV00225、AV00273或AV00283。在另一些實施方案中,優選的表2中dsRNAi試劑包括例如雙鏈體AV00227、AV00260、AV00285、AV00266或AV00280。在另一些實施方案中,優選的表3中dsRNAi試劑包括例如雙鏈體AD00353、AD00356、AD00358、AD00364、AD00365、AD00366、AD00368、AD00370、AD00430、AD00431、AD00432、AD00521、AD00521-1、AD00364-1、AD00365-2、AD00366-1和AD00432-1。Some embodiments of the invention include RNAi agents capable of inhibiting xanthine dehydrogenase (XDH) gene expression, such as, but not limited to, double-stranded (ds) RNAi agents. The xanthine dehydrogenase (XDH) dsRNA reagent of the present invention can target xanthine dehydrogenase (XDH) transcripts, resulting in the inhibition of xanthine dehydrogenase (XDH) protein expression. Some embodiments of the invention also include compositions comprising xanthine dehydrogenase (XDH) gene RNAi agents and methods of using the compositions. The xanthine dehydrogenase (XDH) gene RNAi agents disclosed herein can be attached to a delivery compound for delivery to cells, including delivery to hepatocytes. Pharmaceutical compositions of the invention may comprise at least one xanthine dehydrogenase (XDH) dsRNA agent and a delivery compound. In some embodiments of the invention, the delivery compound is a GalNAc-containing delivery compound. The xanthine dehydrogenase (XDH) gene RNAi reagent delivered to cells can inhibit xanthine dehydrogenase (XDH) gene expression, thereby reducing the activity of the gene's xanthine dehydrogenase (XDH) protein product in cells. The dsRNAi agents of the present invention can be used to treat xanthine dehydrogenase (XDH)-related diseases and conditions. Such dsRNAi agents include, for example, duplexes AV00206 to AV00292 shown in Table 1. In some embodiments, preferred dsRNAi agents include, for example, duplexes AV00227, AV00260, AV00285, AV00266, AV00280, AV00238, AV00249, AV00289, AV00233, AV00225, AV00273, or AV00283. In other embodiments, preferred dsRNAi agents of Table 2 include, for example, duplexes AV00227, AV00260, AV00285, AV00266, or AV00280. In other embodiments, preferred dsRNAi agents in Table 3 include, for example, duplexes AD00353, AD00356, AD00358, AD00364, AD00365, AD00366, AD00368, AD00370, AD00430, AD00431, AD00432, AD00521, AD00521-1, AD00364-1 , AD00365-2, AD00366-1 and AD00432-1.
在本發明的一些實施方案中,降低細胞或對象中黃嘌呤脫氫酶(XDH)表達分別治療與細胞或對象中黃嘌呤脫氫酶(XDH)表達相關的疾病或病症。可通過降低黃嘌呤脫氫酶(XDH) 活性治療的疾病和病症的非限制性實例是:高尿酸血症、痛風、NAFLD、NASH、代謝紊亂、胰島素抵抗、心血管疾病、2型糖尿病、Lesch Nyhan症候群、肝醣儲積症(GSD),例如I型GSD,或與氧化應激有關的疾病,例如慢性低度炎症;或其他XDH相關疾病。In some embodiments of the invention, reducing xanthine dehydrogenase (XDH) expression in a cell or subject treats a disease or disorder associated with xanthine dehydrogenase (XDH) expression in a cell or subject, respectively. Non-limiting examples of diseases and conditions that can be treated by reducing xanthine dehydrogenase (XDH) activity are: hyperuricemia, gout, NAFLD, NASH, metabolic disorders, insulin resistance, cardiovascular disease, type 2 diabetes, Lesch Nyhan syndrome, glycogen storage disorders (GSD), such as GSD type I, or diseases related to oxidative stress, such as chronic low-grade inflammation; or other XDH-related diseases.
下面描述了如何製備和使用包含黃嘌呤脫氫酶(XDH) 單鏈(ssRNA)和雙鏈(dsRNA)試劑的組合物來抑制黃嘌呤脫氫酶(XDH)基因表達,以及用於治療由黃嘌呤脫氫酶(XDH)基因表達引起或調節的疾病和病症的組合物和方法。如本文所用,由黃嘌呤脫氫酶(XDH)基因表達的存在和/或水平引起或調節的疾病和/或病症稱為“黃嘌呤脫氫酶(XDH)相關疾病和/或病症”。術語“RNAi”也是本領域已知的,並且可以被稱為“siRNA”。Described below is how to prepare and use compositions containing xanthine dehydrogenase (XDH) single-stranded (ssRNA) and double-stranded (dsRNA) reagents to inhibit xanthine dehydrogenase (XDH) gene expression, and for treating symptoms caused by xanthine dehydrogenase (XDH). Compositions and methods for diseases and conditions caused or modulated by purine dehydrogenase (XDH) gene expression. As used herein, diseases and/or conditions caused or modulated by the presence and/or levels of xanthine dehydrogenase (XDH) gene expression are referred to as "xanthine dehydrogenase (XDH)-related diseases and/or conditions." The term "RNAi" is also known in the art and may be referred to as "siRNA".
如本文所用,“G”、“C”、“A”和“U”通常各自代表分別含有鳥嘌呤、胞嘧啶、腺嘌呤和尿嘧啶作為鹼基的核苷酸。然而,可以理解的是,術語“核糖核苷酸”或“核苷酸”也可以指修飾的核苷酸,如下文進一步詳述的,或可替換的替代部分。本領域技術人員理解,鳥嘌呤、胞嘧啶、腺嘌呤和尿嘧啶可以被其他部分替換,而不會實質性改變包含這種替換部分的核苷酸的寡核苷酸的鹼基配對財產。例如,但不限於,包含肌苷作為其鹼基的核苷酸可以與包含腺嘌呤、胞嘧啶或尿嘧啶的核苷酸鹼基配對。因此,在本發明的核苷酸序列中,含有尿嘧啶、鳥嘌呤或腺嘌呤的核苷酸可以被含有例如肌苷的核苷酸取代。包含這樣的替換部分的序列是本發明的實施方案。As used herein, "G", "C", "A" and "U" generally each represent a nucleotide containing guanine, cytosine, adenine and uracil as bases, respectively. However, it will be understood that the term "ribonucleotide" or "nucleotide" may also refer to modified nucleotides, as described in further detail below, or alternative replacement moieties. Those skilled in the art understand that guanine, cytosine, adenine and uracil can be replaced by other moieties without substantially altering the base pairing properties of the oligonucleotide containing the nucleotides of such replaced moieties. For example, but not limited to, a nucleotide containing inosine as its base may base pair with a nucleotide containing adenine, cytosine, or uracil. Therefore, in the nucleotide sequences of the present invention, nucleotides containing uracil, guanine or adenine may be replaced by nucleotides containing, for example, inosine. Sequences containing such replacement moieties are embodiments of the invention.
如本文所用,術語“RNAi”是指包含RNA並通過RNA誘導的沉默複合物(RISC)途徑介導RNA轉錄物的靶向切割的試劑。如本領域已知的,RNAi靶區域是指在基因轉錄過程中形成的RNA分子的核苷酸序列的連續部分,其包括信使RNA(mRNA),它是初級轉錄產物RNA的加工產物。該序列的靶標部分將至少足夠長以用作在該部分處或附近進行 RNAi定向切割的底物。靶序列可以是8-30個核苷酸長(包括端值)、10-30個核苷酸長(包括端值)、12-25個核苷酸長(包括端值)、15-23個核苷酸長(包括端值)、16 -23 個核苷酸長(包括端值),或18-23個核苷酸長(包括端值),並包括每個規定範圍內的所有較短長度。在本發明的一些實施方案中,靶序列為9、10、11、12、13、14、15、16、17、18、19、20、21、22、23、24、25或26個核苷酸長。在某些實施方案中,靶序列的長度在9到26個核苷酸之間(包括端值),包括其間的所有子範圍和整數。例如,雖然不意在限制,但在本發明的某些實施方案中,靶序列為8、9、10、11、12、13、14、15、16、17、18、19、20、21、22、23、24、25、26、27、28、29或30個核苷酸長,該序列與黃嘌呤脫氫酶(XDH)基因的RNA轉錄物的至少一部分完全或至少基本上互補。As used herein, the term "RNAi" refers to agents that contain RNA and mediate targeted cleavage of RNA transcripts through the RNA-induced silencing complex (RISC) pathway. As is known in the art, an RNAi target region refers to a contiguous portion of the nucleotide sequence of an RNA molecule formed during gene transcription, which includes messenger RNA (mRNA), which is a processing product of the primary transcript RNA. The target portion of the sequence will be at least long enough to serve as a substrate for RNAi-directed cleavage at or near that portion. The target sequence can be 8-30 nucleotides long (inclusive), 10-30 nucleotides long (inclusive), 12-25 nucleotides long (inclusive), 15-23 nucleotides long (inclusive), 16 - 23 nucleotides long (inclusive), or 18 - 23 nucleotides long (inclusive), including all shorter within each specified range length. In some embodiments of the invention, the target sequence is 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25 or 26 nucleosides Sour and long. In certain embodiments, the target sequence is between 9 and 26 nucleotides in length, inclusive, including all subranges and integers therebetween. For example, although not intended to be limiting, in certain embodiments of the invention, the target sequences are 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22 , 23, 24, 25, 26, 27, 28, 29 or 30 nucleotides long, the sequence is completely or at least substantially complementary to at least a portion of the RNA transcript of the xanthine dehydrogenase (XDH) gene.
本發明的一些方面包括包含一種或更多種黃嘌呤脫氫酶(XDH) dsRNA試劑和藥學上可接受的載體的藥物組合物。在本發明的某些實施方案中,如本文所述的黃嘌呤脫氫酶(XDH)基因RNAi抑制黃嘌呤脫氫酶(XDH)蛋白的表達。Some aspects of the invention include pharmaceutical compositions comprising one or more xanthine dehydrogenase (XDH) dsRNA agents and a pharmaceutically acceptable carrier. In certain embodiments of the invention, xanthine dehydrogenase (XDH) gene RNAi as described herein inhibits the expression of xanthine dehydrogenase (XDH) protein.
本發明的一些實施方案中,藥物組合物包括一種、兩種、三種或更多種獨立的抗黃嘌呤脫氫酶(XDH) dsRNA試劑,並且還可以包括一種或多種獨立選擇的遞送化合物。 在一些實施方案中,將能夠分別靶向黃嘌呤脫氫酶(XDH) mRNA的一個、兩個、三個、四個或更多個不同位置/區域的兩個、三個、四個或更多個黃嘌呤脫氫酶(XDH) dsRNA施用於細胞或對象中。In some embodiments of the invention, pharmaceutical compositions include one, two, three, or more independent antixanthine dehydrogenase (XDH) dsRNA agents, and may also include one or more independently selected delivery compounds. In some embodiments, two, three, four or more different positions/regions will be capable of targeting one, two, three, four or more different positions/regions of xanthine dehydrogenase (XDH) mRNA respectively. Multiple xanthine dehydrogenase (XDH) dsRNAs are administered to cells or subjects.
如本文所用,“dsRNA試劑”是指包含RNA或RNA樣(例如,化學修飾的RNA)寡核苷酸分子的組合物,其能夠降解或抑制靶mRNA轉錄物的翻譯。儘管不希望限於特定理論,但本發明的dsRNA試劑可通過RNA干擾機制起作用(即,通過與哺乳動物細胞的RNA干擾途徑機制(RNA誘導的沉默複合物或RISC)相互作用來誘導產生RNA干擾),或通過任何替代機制或途徑起作用。在植物、無脊椎動物和脊椎動物細胞中實現基因沉默的方法是本領域所公知的(參見例如,Sharp et al., Genes Dev. 2001, 15:485; Bernstein, et al., (2001) Nature 409:363; Nykanen, et al., (2001) Cell 107:309; 以及Elbashir, et al., (2001) Genes Dev. 15:188)),其各自的公開內容通過引用整體並入本文。本領域已知的基因沉默手段可與本文提供的公開內容結合使用以實現抑制黃嘌呤脫氫酶(XDH)的表達。As used herein, a "dsRNA agent" refers to a composition comprising an RNA or RNA-like (eg, chemically modified RNA) oligonucleotide molecule that is capable of degrading or inhibiting translation of a target mRNA transcript. While not wishing to be bound to a particular theory, the dsRNA agents of the present invention may act through an RNA interference mechanism (i.e., induce RNA interference by interacting with the RNA interference pathway machinery of mammalian cells (RNA-induced silencing complex or RISC) ), or act through any alternative mechanism or pathway. Methods to achieve gene silencing in plant, invertebrate and vertebrate cells are well known in the art (see, e.g., Sharp et al., Genes Dev. 2001, 15:485; Bernstein, et al., (2001) Nature 409:363; Nykanen, et al., (2001) Cell 107:309; and Elbashir, et al., (2001) Genes Dev. 15:188)), the disclosures of which are incorporated herein by reference in their entirety. Gene silencing means known in the art can be used in conjunction with the disclosure provided herein to achieve inhibition of xanthine dehydrogenase (XDH) expression.
本文公開的dsRNA試劑由正義鏈和反義鏈組成,其包括但不限於:短干擾RNA(siRNA)、RNAi試劑、微RNA(miRNA)、短髮夾 RNA(shRNA)和切丁酶(Dicer)底物。本文描述的dsRNA試劑的反義鏈至少部分地與所靶向的mRNA互補,本領域能夠理解,多種長度的dsRNA雙鏈體結構可用於抑制靶基因表達。例如,已知具有19、20、21、22和23個鹼基對的雙鏈體結構的dsRNA可有效誘導RNA干擾(Elbashir et al., EMBO 2001, 20:6877-6888)。本領域還已知較短或較長的RNA雙鏈體結構也可有效誘導RNA干擾。本發明的某些實施方案中的黃嘌呤脫氫酶(XDH) dsRNA可以包含至少一條長度至少為21 nt的鏈,或者雙鏈體可以具有基於表1-3中任何列出的序列之一的長度減1、2、3 nt或更短的長度。與分別在表1-3中列出的dsRNA相比,在其一端或兩端減少4個核苷酸也可以是有效的。在本發明的一些實施方案中,黃嘌呤脫氫酶(XDH) dsRNA試劑可具有來自表1-3的一個或更多個序列的至少15、16、17、18、19、20或更多個連續核苷酸的部分序列,並且它們抑制黃嘌呤脫氫酶(XDH)基因表達的能力與由包含全序列(此處也稱為“親本”序列)的dsRNA產生的抑制水平相差不超過5%、10%、15%、20%、25%或30%。表1-3中公開的正義序列、反義序列和雙鏈體在本文中可以稱為“親本”序列,意味著表1-3中公開的序列可以被修飾、縮短、延長、包括替換等,如本文所述,所得序列保留其親本序列在本發明的方法和組合物中的全部或至少部分功效。The dsRNA reagent disclosed herein consists of a sense strand and an antisense strand, including but not limited to: short interfering RNA (siRNA), RNAi reagents, microRNA (miRNA), short hairpin RNA (shRNA) and Dicer. substrate. The antisense strand of the dsRNA reagents described herein is at least partially complementary to the targeted mRNA, and it is understood in the art that dsRNA duplex structures of various lengths can be used to inhibit target gene expression. For example, dsRNAs with duplex structures of 19, 20, 21, 22, and 23 base pairs are known to effectively induce RNA interference (Elbashir et al., EMBO 2001, 20:6877-6888). It is also known in the art that shorter or longer RNA duplex structures are also effective in inducing RNA interference. The xanthine dehydrogenase (XDH) dsRNA in certain embodiments of the invention may comprise at least one strand of at least 21 nt in length, or the duplex may have a sequence based on one of the sequences listed in Tables 1-3 Length minus 1, 2, 3 nt or less. It can also be effective to reduce 4 nucleotides at one or both ends compared to the dsRNA listed in Tables 1-3 respectively. In some embodiments of the invention, the xanthine dehydrogenase (XDH) dsRNA reagent may have at least 15, 16, 17, 18, 19, 20 or more of one or more sequences from Tables 1-3 A partial sequence of contiguous nucleotides and their ability to inhibit xanthine dehydrogenase (XDH) gene expression does not differ by more than 5 from the level of inhibition produced by a dsRNA containing the entire sequence (also referred to here as the "parental" sequence) %, 10%, 15%, 20%, 25% or 30%. The sense sequences, antisense sequences and duplexes disclosed in Tables 1-3 may be referred to as "parent" sequences herein, which means that the sequences disclosed in Tables 1-3 may be modified, shortened, extended, include substitutions, etc. , the resulting sequence retains all or at least part of the efficacy of its parent sequence in the methods and compositions of the invention, as described herein.
本發明的組合物和方法的某些實施方案在組合物中包含單鏈RNA和/或將單鏈RNA施用於對象。例如,表1-3任一項中所列的反義鏈可以作為一種組合物或在一種組合物內,該組合物施用給對象會降低對象中黃嘌呤脫氫酶(XDH)多肽活性和/或黃嘌呤脫氫酶(XDH)基因的表達。表1-3顯示了某些黃嘌呤脫氫酶(XDH) dsRNA試劑的反義鏈和正義鏈核心延伸鹼基序列。可以包含在本發明的某些組合物中和/或在本發明的某些方法中施用的單鏈反義分子在本文中稱為“單鏈反義試劑”或“反義多核苷酸試劑”。可以包含在某些組合物中和/或在本發明的某些方法中施用的單鏈正義分子在本文中稱為“單鏈正義試劑”或“正義多核苷酸試劑”。術語“鹼基序列”在本文中是指沒有化學修飾或遞送化合物的多核苷酸序列。例如,表1所示的正義鏈對應於是表3中的相應鹼基序列;但表3中的相應序列中顯示了各自的化學修飾和遞送化合物。在此公開的序列可以被分配標識符。例如,單鏈正義序列可以用“正義鏈SS#”來標識;單鏈反義序列可以用“反義鏈AS#”來標識;並且包含正義鏈和反義鏈的雙鏈體可以用“雙鏈體AD#”來標識。Certain embodiments of the compositions and methods of the present invention include single-stranded RNA in the composition and/or administer the single-stranded RNA to the subject. For example, the antisense strand listed in any of Tables 1-3 can be used as or within a composition that, when administered to a subject, reduces xanthine dehydrogenase (XDH) polypeptide activity and/or or the expression of the xanthine dehydrogenase (XDH) gene. Tables 1-3 show the antisense and sense strand core extension base sequences for certain xanthine dehydrogenase (XDH) dsRNA reagents. Single-stranded antisense molecules that may be included in certain compositions of the invention and/or administered in certain methods of the invention are referred to herein as "single-stranded antisense agents" or "antisense polynucleotide agents" . Single-stranded sense molecules that may be included in certain compositions and/or administered in certain methods of the invention are referred to herein as "single-stranded sense agents" or "sense polynucleotide agents." The term "base sequence" as used herein refers to a polynucleotide sequence without chemical modifications or delivery compounds. For example, the sense strand shown in Table 1 corresponds to the corresponding base sequence in Table 3; however, the corresponding sequence in Table 3 shows the respective chemical modifications and delivery compounds. Sequences disclosed herein may be assigned identifiers. For example, a single-stranded sense sequence may be identified with "sense strand SS#"; a single-stranded antisense sequence may be identified with "antisense strand AS#"; and a duplex containing a sense strand and an antisense strand may be identified with "duplex Chain AD#" to identify.
表1包括正義鏈和反義鏈,並提供了由表1中同一行上的正義鏈和反義鏈形成的雙鏈體的標識號。在本發明的某些實施方案中,反義序列在其第1位中包含核鹼基u或核鹼基a。在本發明的某些實施方案中,反義序列在反義序列的第1位包含核鹼基u。如本文所用,術語“匹配位置”在某種意義上是指當兩條鏈作為雙鏈體時每條鏈中互相“配對”的位置。例如,在21核鹼基正義鏈和21核鹼基反義鏈中,正義鏈第1位與反義鏈第21位的核鹼基處於“匹配位置”。在另一個非限制性實例中,對於23核鹼基正義鏈和23核鹼基反義鏈,正義鏈的第2位核鹼基與反義鏈的22位處於匹配位置。在另一個非限制性實例中,在18核鹼基正義鏈和18核鹼基反義鏈中,正義鏈第1位核鹼基與反義鏈第18位核鹼基處於匹配位置;並且正義鏈中的第4位核鹼基與反義鏈中的第15位核鹼基處於匹配位置。技術人員會理解如何識別雙鏈和成對鏈的正義和反義鏈之間的匹配位置。Table 1 includes the sense and antisense strands and provides the identification number of the duplex formed by the sense and antisense strands on the same row in Table 1. In certain embodiments of the invention, the antisense sequence contains nucleobase u or nucleobase a in position 1 thereof. In certain embodiments of the invention, the antisense sequence comprises nucleobase u at position 1 of the antisense sequence. As used herein, the term "matching position" refers in a sense to a position in each strand that "pairs" with each other when the two strands act as a duplex. For example, in a 21-nucleobase sense strand and a 21-nucleobase antisense strand, the nucleobase at position 1 of the sense strand is in a "matching position" with the nucleobase at position 21 of the antisense strand. In another non-limiting example, for a 23 nucleobase sense strand and a 23 nucleobase antisense strand, nucleobase position 2 of the sense strand is in a matching position with position 22 of the antisense strand. In another non-limiting example, in the 18-nucleobase sense strand and the 18-nucleobase antisense strand, the nucleobase at position 1 of the sense strand is in a matching position with the nucleobase at position 18 of the antisense strand; and the sense strand Nucleobase 4 in the strand matches nucleobase 15 in the antisense strand. The skilled person will understand how to identify matching positions between the sense and antisense strands of duplexes and paired strands.
表1中的第一列表示雙鏈體的雙鏈體AV#,該雙鏈體在表格同一行中包含正義和反義序列。例如,表1公開了指定為“雙鏈體AV00206”的雙鏈體,其包含相應的正義鏈序列和反義鏈序列。因此,表1中的每一行都標識了本發明的雙鏈體,每一個都包含顯示在同一行中的正義和反義序列,每個雙鏈體的指定標識符均顯示在該行的第一列中。The first column in Table 1 represents the duplex AV# of the duplex containing the sense and antisense sequences in the same row of the table. For example, Table 1 discloses a duplex designated "Duplex AV00206" which contains corresponding sense and antisense strand sequences. Thus, each row in Table 1 identifies a duplex of the invention, each containing the sense and antisense sequences shown in the same row, and the assigned identifier for each duplex is shown at the end of that row. in one column.
在本發明方法的一些實施方案中,向對象施用包含表1中所示多核苷酸序列的RNAi試劑。在本發明的一些實施方案中,向對象施用的RNAi試劑包括雙鏈體,所述雙鏈體包含表1中列出的鹼基序列中的至少一個,並包含0、1、2、3、4、5、6、7、8、9、10、11、12、13、14、15、16、17、18、19、20、21、22、23 或24個序列修改。在本發明方法的一些實施方案中,還包括將表1中所示多核苷酸序列的RNAi試劑連接至遞送分子上,其非限制性實例是包含GalNAc的遞送化合物。In some embodiments of the methods of the invention, an RNAi agent comprising the polynucleotide sequence set forth in Table 1 is administered to the subject. In some embodiments of the invention, the RNAi agent administered to the subject includes a duplex comprising at least one of the base sequences listed in Table 1 and comprising 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23 or 24 sequence modifications. In some embodiments of the method of the present invention, it is also included in linking an RNAi agent of the polynucleotide sequence shown in Table 1 to a delivery molecule, a non-limiting example of which is a delivery compound comprising GalNAc.
表1:無修飾的黃嘌呤脫氫酶(XDH)基因RNAi試劑反義鏈和正義鏈序列
表1所有序列均顯示為5'到3'方向。雙鏈體AV#是分配給表中同一行中兩條鏈的雙鏈體的編號。表1第三列中的“SEQ ID NO”是第二列中顯示的正義序列的序列編號,表1第五列中的“SEQ ID NO”是第四列中顯示的反義序列的序列編號。All sequences in Table 1 are shown in the 5' to 3' direction. Duplex AV# is the number assigned to the duplex of both strands in the same row in the table. The "SEQ ID NO" in the third column of Table 1 is the sequence number of the sense sequence shown in the second column, and the "SEQ ID NO" in the fifth column of Table 1 is the sequence number of the antisense sequence shown in the fourth column. .
表2顯示了本發明的某些化學修飾的黃嘌呤脫氫酶(XDH)基因RNAi劑反義鏈和正義鏈序列。在本發明方法的一些實施方案中,將具有表2中所示多核苷酸序列的RNAi試劑施用於細胞和/或對象。在本發明方法的一些實施方案中,將具有表2中所示多核苷酸序列的RNAi試劑施用於對象。在本發明的一些實施方案中,向對象施用的RNAi試劑包含在表2第一列中標注的雙鏈體,並且分別包含顯示在表2中同一行第三列和第六列的正義和反義鏈序列中的序列修飾。在本發明方法的一些實施方案中,表2中所示的序列可以連接到(在本文中也稱為“綴合到”)能夠將RNAi試劑遞送至對象的細胞和/或組織的化合物上。可用於本發明的某些實施方案中的遞送化合物的非限制性實例是含GalNAc的化合物。在表2中,第一列表示鹼基序列的雙鏈體AV#,與表1對應。對於雙鏈體AV#標識的鹼基序列,不僅顯示正義和反義鏈所包含的鹼基序列,而且具有表2同一行中所示的指定化學修飾。例如,表1第一行顯示了正義和反義鹼基單鏈序列,它們一起構成雙鏈體,標識為:雙鏈體AV# AV00206;而表2列出的雙鏈體AV# AV00206中,作為雙鏈體,其包含AV00206-SS和AV00206- AS的鹼基序列,而且分別包含在第三列和第六列中顯示的正義和反義序列中的化學修飾。表2第二列中的“正義鏈SS#”是同一行中第三列所示正義序列(包括修飾)的指定標識符。表2第五列中的“反義鏈AS#”是第六列中顯示的反義序列(包括修飾)的指定標識符。表2第四列中的“SEQ ID NO”是同一行中第三列所示正義序列(包括修飾)的序列編號。表2第七列中的“SEQ ID NO”是第六列中顯示的反義序列(包括修飾)的序列編號。Table 2 shows the antisense and sense strand sequences of certain chemically modified xanthine dehydrogenase (XDH) gene RNAi agents of the present invention. In some embodiments of the methods of the invention, an RNAi agent having the polynucleotide sequence set forth in Table 2 is administered to the cell and/or subject. In some embodiments of the methods of the invention, an RNAi agent having the polynucleotide sequence set forth in Table 2 is administered to the subject. In some embodiments of the invention, the RNAi agent administered to the subject comprises the duplexes noted in the first column of Table 2, and comprises the sense and reverse duplexes shown in the third and sixth columns of the same row in Table 2, respectively. Sequence modifications in the sense strand sequence. In some embodiments of the methods of the invention, the sequences shown in Table 2 can be linked to (also referred to herein as "conjugated to") a compound capable of delivering an RNAi agent to cells and/or tissues of a subject. Non-limiting examples of delivery compounds useful in certain embodiments of the invention are GalNAc-containing compounds. In Table 2, the first column represents the duplex AV# of the base sequence and corresponds to Table 1. For the base sequence identified by duplex AV#, not only the base sequences contained in the sense and antisense strands are shown, but also with the specified chemical modifications shown in the same row of Table 2. For example, the first row of Table 1 shows the single-stranded sequences of sense and antisense bases, which together form a duplex, identified as: duplex AV# AV00206; and in the duplex AV# AV00206 listed in Table 2, As a duplex, it contains the base sequences of AV00206-SS and AV00206-AS, and contains chemical modifications in the sense and antisense sequences shown in the third and sixth columns, respectively. The "sense strand SS#" in the second column of Table 2 is the designated identifier for the sense sequence (including modifications) shown in the third column of the same row. "Antisense Strand AS#" in the fifth column of Table 2 is the designated identifier for the antisense sequence (including modifications) shown in the sixth column. The "SEQ ID NO" in the fourth column of Table 2 is the sequence number of the sense sequence (including modifications) shown in the third column of the same row. "SEQ ID NO" in the seventh column of Table 2 is the sequence number of the antisense sequence (including modifications) shown in the sixth column.
表2:提供化學修飾的黃嘌呤脫氫酶(XDH)基因RNAi試劑反義鏈和正義鏈序列。所有序列都顯示為5'到3'。這些序列用於本文所述的某些體外測試研究。化學修飾表示為:大寫:2'-氟;小寫:2'-OMe;硫代磷酸酯:* 。Table 2: Provides the antisense and sense strand sequences of chemically modified xanthine dehydrogenase (XDH) gene RNAi reagents. All sequences are shown 5' to 3'. These sequences were used in certain in vitro testing studies described herein. Chemical modifications are expressed as: uppercase: 2'-fluoro; lowercase: 2'-OMe; phosphorothioate: *.
表2:化學修飾的黃嘌呤脫氫酶(XDH)基因RNAi試劑反義鏈和正義鏈序列
表3顯示了本發明的某些化學修飾的黃嘌呤脫氫酶(XDH)基因 RNAi試劑反義鏈和正義鏈序列。在本發明方法的一些實施方案中,將表3中所示的RNAi試劑施用於細胞和/或對象。在本發明方法的一些實施方案中,將具有表3中所示多核苷酸序列的RNAi試劑施用於對象。在本發明的一些實施方案中,向對象施用的RNAi試劑包含在表3的第一列中標識的雙鏈體,並且分別包含在表3中同一行第三列和第六列的正義和反義鏈序列中顯示的序列修飾和/或遞送化合物。該序列用於本文別處描述的某些體內測試研究。在本發明方法的一些實施方案中,表3中所示的序列可以連接到(在本文中也稱為“綴合到”)用於遞送的化合物上,其非限制性實例是含GalNAc的化合物,即在表3中第三列的正義鏈上具有標識為“GLX-n”的遞送化合物。遞送化合物的某些實施方案被標識為表3中第三列有義鏈上的“GLS-5”、“GLS-15”或“GLX-n”。如本文所用和表3中所示,“GLS-5”、“GLS-15”和“GLX-n”表示含有GalNAc的化合物。如本文所用, “GLX”用於表示“GLS”或“GLO”遞送化合物(“X”可以是“S”或“O”),並且GLX-n可以是任何GLS和GLO可以在合成過程中連接到寡核苷酸 3'-或者5'-末端的遞送化合物。舉例但不局限於此:GLX-13和GLX-14可以在合成過程中連接到本發明的寡核苷酸的3'-末端;GLX-5和GLX-15可以在合成過程中連接到本發明的寡核苷酸的5'-末端。在一些實施例中,如本文所用和表3所示,“GLX-n”用於表示所連接的含GalNAc的化合物,其被代替為化合物GLS-1、GLS-2、GLS-3、GLS-4、GLS-5、GLS-6、GLS-7、GLS-8、GLS-9、GLS-10、GLS-11、GLS-12、GLS-13、GLS-14、GLS-15、GLS-16、GLO-1、GLO-2、GLO-3、GLO-4、GLO-5、GLO-6、GLO-7、GLO-8、GLO-9、GLO-10、GLO-11、GLO-12、GLO-13、GLO-14、GLO-15和GLO-16中的任一種。在一些實施中, GLX-n表示為舉例但是不限於此現有技術中(Jayaprakash , et al., (2014) J. Am. Chem. Soc., 136, 16958−16961)公開的可用於所連接的含GalNAc的化合物,該化合物用於本文別處描述的某些體內測試研究。本領域技術人員將能夠製備和使用本發明的dsRNA化合物,其中附著的遞送化合物包括但是不局限於:GLS-1、GLS-2、GLS-3、GLS-4、GLS-5、GLS-6、GLS-7、GLS-8、GLS-9、 GLS-10、GLS-11、 GLS-12、 GLS-13、GLS-14、 GLS-15、 GLS-16、 GLO-1、 GLO-2、 GLO -3、GLO-4、GLO-5、GLO-6、GLO-7、GLO-8、GLO-9、GLO-10、GLO-11、GLO-12、GLO-13、GLO-14、GLO-15 和 GLO-16。其中每一個的結構在本文別處提供。表3的第一列提供了分配給表中該行中的正義和反義序列的雙鏈體的雙鏈體AD#。例如,雙鏈體AD# AD00352是正義鏈AD00352-SS和反義鏈AD00352-AS構成的雙鏈體。表3中的每一行提供了一條正義鏈和一條反義鏈,並公開了所示正義鏈和反義鏈構成的雙鏈體。表3第二列中的“正義鏈SS#”是同一行第三列所示正義序列(包括修改)的指定標識符。表3第五列中的“反義鏈AS#”是第六列中顯示的反義序列(包括修飾)的指定標識符。某些所連接的含GalNAc的GLO化合物的標識符顯示為GLX-n,並且應當理解,GLO-n或GLS-n化合物中的另一種可以替代顯示為GLX-n的化合物,所得化合物也包括所得化合物包括在本發明的方法和/或組合物的實施方案中。表3中SEQ ID NO:350至SEQ ID NO:397,SEQ ID NO:446至SEQ ID NO:451是正義鏈的序列並且SEQ ID NO:398至SEQ ID NO:445,SEQ ID NO:452至SEQ ID NO:457是反義鏈序列。在表3中,遞送分子表示為在正義鏈NO: 350至SEQ ID NO:397,SEQ ID NO:446至SEQ ID NO:451的3'或者5'端的“GLS-5”、“GLS-15”或“GLX-n”。化學修飾表示為:大寫:2'-氟;小寫:2'-甲氧基;硫代磷酸鹽:*;Invab:反向無鹼基;imann:在每條鏈末端時 : 或當進一步偶聯遞送分子或靶向基團時: 。 Table 3 shows the antisense and sense strand sequences of certain chemically modified xanthine dehydrogenase (XDH) gene RNAi reagents of the present invention. In some embodiments of the methods of the invention, an RNAi agent shown in Table 3 is administered to the cell and/or subject. In some embodiments of the methods of the invention, an RNAi agent having the polynucleotide sequence set forth in Table 3 is administered to the subject. In some embodiments of the invention, the RNAi agent administered to the subject comprises a duplex identified in the first column of Table 3, and comprises the sense and reverse duplexes, respectively, in the third and sixth columns of the same row of Table 3. The sequence shown in the sense strand sequence modifies and/or delivers the compound. This sequence was used in certain in vivo testing studies described elsewhere herein. In some embodiments of the methods of the invention, the sequences shown in Table 3 can be linked (also referred to herein as "conjugated") to a compound for delivery, a non-limiting example of which is a GalNAc-containing compound , that is, there is a delivery compound identified as “GLX-n” on the sense strand in the third column of Table 3. Certain embodiments of delivery compounds are identified as "GLS-5", "GLS-15" or "GLX-n" on the sense strand in the third column of Table 3. As used herein and as shown in Table 3, "GLS-5", "GLS-15" and "GLX-n" refer to GalNAc-containing compounds. As used herein, "GLX" is used to mean a "GLS" or "GLO" delivery compound ("X" can be "S" or "O"), and GLX-n can be any GLS and GLO that can be linked during synthesis Delivery compounds to the 3'- or 5'-end of the oligonucleotide. For example but not limited to this: GLX-13 and GLX-14 can be connected to the 3'-end of the oligonucleotide of the present invention during the synthesis process; GLX-5 and GLX-15 can be connected to the present invention during the synthesis process. the 5'-end of the oligonucleotide. In some embodiments, as used herein and as shown in Table 3, "GLX-n" is used to represent an attached GalNAc-containing compound, which is replaced with compounds GLS-1, GLS-2, GLS-3, GLS- 4. GLS-5, GLS-6, GLS-7, GLS-8, GLS-9, GLS-10, GLS-11, GLS-12, GLS-13, GLS-14, GLS-15, GLS-16, GLO-1, GLO-2, GLO-3, GLO-4, GLO-5, GLO-6, GLO-7, GLO-8, GLO-9, GLO-10, GLO-11, GLO-12, GLO- 13. Any one of GLO-14, GLO-15 and GLO-16. In some implementations, GLX-n is shown as an example but not limited to the ones disclosed in the prior art (Jayaprakash, et al., (2014) J. Am. Chem. Soc., 136, 16958−16961) that can be used to connect GalNAc-containing compounds used in certain in vivo testing studies described elsewhere herein. One skilled in the art will be able to prepare and use the dsRNA compounds of the invention, wherein attached delivery compounds include, but are not limited to: GLS-1, GLS-2, GLS-3, GLS-4, GLS-5, GLS-6, GLS-7, GLS-8, GLS-9, GLS-10, GLS-11, GLS-12, GLS-13, GLS-14, GLS-15, GLS-16, GLO-1, GLO-2, GLO - 3. GLO-4, GLO-5, GLO-6, GLO-7, GLO-8, GLO-9, GLO-10, GLO-11, GLO-12, GLO-13, GLO-14, GLO-15 and GLO-16. The structure of each of these is provided elsewhere in this article. The first column of Table 3 provides the duplex AD# assigned to the duplexes for the sense and antisense sequences in that row of the table. For example, duplex AD# AD00352 is a duplex composed of sense strand AD00352-SS and antisense strand AD00352-AS. Each row in Table 3 provides one sense strand and one antisense strand, and discloses the duplex consisting of the indicated sense strand and antisense strand. The "sense strand SS#" in the second column of Table 3 is the designated identifier for the sense sequence (including modifications) shown in the third column of the same row. "Antisense Strand AS#" in the fifth column of Table 3 is the designated identifier for the antisense sequence (including modifications) shown in the sixth column. The identifier for certain attached GalNAc-containing GLO compounds is shown as GLX-n, and it is understood that another of the GLO-n or GLS-n compounds may be substituted for the compound shown as GLX-n and the resulting compound is also included in the Compounds are included in embodiments of the methods and/or compositions of the invention. In Table 3, SEQ ID NO:350 to SEQ ID NO:397, SEQ ID NO:446 to SEQ ID NO:451 are the sequences of the sense strand and SEQ ID NO:398 to SEQ ID NO:445, SEQ ID NO:452 to SEQ ID NO:457 is the antisense strand sequence. In Table 3, the delivery molecules are represented as "GLS-5", "GLS-15" at the 3' or 5' end of the sense strand NO: 350 to SEQ ID NO: 397, SEQ ID NO: 446 to SEQ ID NO: 451 ” or “GLX-n”. Chemical modifications are expressed as: upper case: 2'-fluoro; lower case: 2'-methoxy; phosphorothioate: *; Invab: reverse abasic; imann: at the end of each chain: or when further coupled to a delivery molecule or targeting group: .
表3提供了用於體內測試的化學修飾的黃嘌呤脫氫酶(XDH)基因RNAi試劑反義鏈和正義鏈序列。所有序列都顯示為5'到3'。這些序列用於本文別處描述的某些體內測試研究。體內研究中使用的遞送分子在每條正義鏈5'或者3'末端表示為“GLX-n”。化學修飾表示為:大寫:2'-氟;小寫:2'-OMe;硫代磷酸酯:*;Invab:反向無鹼基;imann:在每條鏈末端時 : 或當進一步偶聯遞送分子或靶向基團時: 。 Table 3 provides antisense and sense strand sequences of chemically modified xanthine dehydrogenase (XDH) gene RNAi reagents for in vivo testing. All sequences are shown 5' to 3'. These sequences were used in certain in vivo testing studies described elsewhere herein. The delivery molecules used in in vivo studies are designated "GLX-n" at the 5' or 3' end of each sense strand. Chemical modifications are expressed as: uppercase: 2'-fluoro; lowercase: 2'-OMe; phosphorothioate: *; Invab: reverse abasic; imann: at the end of each chain: or when further coupled to a delivery molecule or targeting group: .
表3 化學修飾的黃嘌呤脫氫酶(XDH)基因RNAi試劑反義鏈和正義鏈序列
本領域技術人員已知,對於dsRNA的功效而言,錯配是可以容忍的,尤其是錯配在dsRNA的末端區域內的情况。某些錯配具有更好的耐受性,例如具有擺動鹼基對G:U和A:C的錯配對功效的耐受性更好(Du et el., A systematic analysis of the silencing effects of an active siRNA at all single-nucleotide mismatched target sites. Nucleic Acids Res. 2005 Mar 21;33(5):1671-7. Doi: 10.1093/nar/gki312. Nucleic Acids Res. 2005;33(11):3698)。本發明的方法和化合物的一些實施方案中,黃嘌呤脫氫酶(XDH)dsRNA試劑可以含有一個或更多個與黃嘌呤脫氫酶(XDH)靶序列的錯配。在一些實施方案中,本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑不包含錯配。在某些實施方案中,本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑包含不超過1個錯配。在一些實施方案中,本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑包含不超過2個錯配。在某些實施方案中,本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑包含不超過3個錯配。在本發明的一些實施方案中,黃嘌呤脫氫酶(XDH) dsRNA試劑的反義鏈包含與不位於互補區域中心的黃嘌呤脫氫酶(XDH)靶序列的錯配。在一些實施方案中,黃嘌呤脫氫酶(XDH) dsRNA試劑的反義鏈包含1、2、3、4或更多個錯配,其位於互補區域的5'或3'末端之一或兩者的最末5、4、3、2或1個核苷酸內。本文所述的方法和/或本領域已知的方法可用於確定包含與黃嘌呤脫氫酶(XDH)靶序列錯配的黃嘌呤脫氫酶(XDH) dsRNA試劑是否有效抑制黃嘌呤脫氫酶(XDH)基因的表達。 互補性 It is known to those skilled in the art that mismatches are tolerated for the efficacy of dsRNA, especially if the mismatch is within the terminal region of the dsRNA. Certain mismatches are better tolerated, such as those with wobble base pairs G:U and A:C (Du et el., A systematic analysis of the silencing effects of an active siRNA at all single-nucleotide mismatched target sites. Nucleic Acids Res. 2005 Mar 21;33(5):1671-7. Doi: 10.1093/nar/gki312. Nucleic Acids Res. 2005;33(11):3698). In some embodiments of the methods and compounds of the invention, the xanthine dehydrogenase (XDH) dsRNA reagent may contain one or more mismatches to the xanthine dehydrogenase (XDH) target sequence. In some embodiments, the xanthine dehydrogenase (XDH) dsRNA reagents of the invention do not contain mismatches. In certain embodiments, the xanthine dehydrogenase (XDH) dsRNA reagents of the invention contain no more than 1 mismatch. In some embodiments, the xanthine dehydrogenase (XDH) dsRNA reagents of the invention contain no more than 2 mismatches. In certain embodiments, the xanthine dehydrogenase (XDH) dsRNA reagents of the invention contain no more than 3 mismatches. In some embodiments of the invention, the antisense strand of the xanthine dehydrogenase (XDH) dsRNA agent contains a mismatch to the xanthine dehydrogenase (XDH) target sequence that is not centered in the complementary region. In some embodiments, the antisense strand of the xanthine dehydrogenase (XDH) dsRNA agent contains 1, 2, 3, 4, or more mismatches located at one or both of the 5' or 3' ends of the complementary region within the last 5, 4, 3, 2 or 1 nucleotides. The methods described herein and/or methods known in the art can be used to determine whether a xanthine dehydrogenase (XDH) dsRNA reagent containing a mismatch to a xanthine dehydrogenase (XDH) target sequence is effective in inhibiting xanthine dehydrogenase (XDH) gene expression. complementarity
如本文所用,除非另有說明,否則術語“互補性/互補”當用於描述第一核苷酸序列(例如,黃嘌呤脫氫酶(XDH) dsRNA試劑正義鏈或靶標黃嘌呤脫氫酶(XDH) mRNA)與第二核苷酸序列(例如,黃嘌呤脫氫酶(XDH) dsRNA試劑反義鏈或單鏈反義多核苷酸)的相關性時,是指包含第一核苷酸序列的寡核苷酸或多核苷酸與包含第二核苷酸序列的寡核苷酸或多核苷酸雜交[在哺乳動物生理條件(或體外類似條件)下形成鹼基對間氫鍵]、並且在某些條件下形成雙螺旋或雙螺旋結構的能力。其中也可以應用其他條件,例如在生物體內可能遇到的生理相關條件。技術人員將能夠根據雜交核苷酸的最終應用確定最適合測試兩個序列互補性的條件集。互補序列包括沃森-克裏克鹼基對或非沃森-克裏克鹼基對,並且包括天然或修飾的核苷酸或核苷酸模擬物,只要至少達到上述雜交要求的程度即可。序列同一性或互補性與修飾無關。As used herein, unless otherwise stated, the term "complementary/complementary" is used when describing the first nucleotide sequence (e.g., xanthine dehydrogenase (XDH) dsRNA agent sense strand or target xanthine dehydrogenase (XDH)). XDH) mRNA) refers to the inclusion of the first nucleotide sequence when related to a second nucleotide sequence (e.g., xanthine dehydrogenase (XDH) dsRNA reagent antisense strand or single-stranded antisense polynucleotide) an oligonucleotide or polynucleotide that hybridizes to an oligonucleotide or polynucleotide comprising a second nucleotide sequence [which forms hydrogen bonds between base pairs under mammalian physiological conditions (or similar conditions in vitro)], and The ability to form a double helix or duplex structure under certain conditions. Other conditions may also apply, such as physiologically relevant conditions that may be encountered in living organisms. The skilled person will be able to determine the set of conditions most suitable for testing the complementarity of two sequences based on the ultimate application of the hybridizing nucleotides. Complementary sequences include Watson-Crick base pairs or non-Watson-Crick base pairs, and include natural or modified nucleotides or nucleotide mimetics, so long as they are at least to the extent required for hybridization as described above. . Sequence identity or complementarity is independent of modification.
例如,在如本文所述的黃嘌呤脫氫酶(XDH) dsRNA內的互補序列包含含有第一核苷酸序列的寡核苷酸或多核苷酸與含有第二核苷酸序列的寡核苷酸或多核苷酸在一個或兩個核苷酸序列的全長上的鹼基配對。此類序列在本文中可被稱為彼此“完全互補”。應當理解,在設計兩個寡核苷酸以在雜交時形成一個或更多個單鏈突出端的實施方案中,這種突出端在本文中不被視為基於互補性確定的錯配。例如,黃嘌呤脫氫酶(XDH) dsRNA試劑包含一個長度為19個核苷酸的寡核苷酸和另一個長度為20個核苷酸的寡核苷酸,其中較長的寡核苷酸包含與較短的寡核苷酸完全互補的19個核苷酸的序列,出於本文所述的目的,此種情况可以稱為“完全互補”。因此,如本文所用,“完全互補”是指第一多核苷酸的連續序列中的所有(100%)鹼基會與第二多核苷酸的連續序列中的相同數目的鹼基雜交。連續序列可以包含第一或第二核苷酸序列的全部或部分。For example, the complementary sequence within a xanthine dehydrogenase (XDH) dsRNA as described herein includes an oligonucleotide or polynucleotide containing a first nucleotide sequence and an oligonucleotide containing a second nucleotide sequence. Base pairing of an acid or polynucleotide over the entire length of one or two nucleotide sequences. Such sequences may be referred to herein as "completely complementary" to each other. It will be understood that in embodiments where two oligonucleotides are designed to form one or more single-stranded overhangs upon hybridization, such overhangs are not considered herein to be mismatches based on complementarity. For example, the A sequence containing 19 nucleotides that is completely complementary to a shorter oligonucleotide may be referred to as "perfectly complementary" for the purposes described herein. Thus, as used herein, "perfect complementarity" means that all (100%) of the bases in the contiguous sequence of a first polynucleotide will hybridize to the same number of bases in the contiguous sequence of a second polynucleotide. The contiguous sequence may comprise all or part of the first or second nucleotide sequence.
如本文所用,術語“基本互補”是指在核鹼基序列的雜交對中,第一多核苷酸的連續序列中的鹼基的至少約85%(但不是全部)會與第二多核苷酸的連續序列中相同數目的鹼基雜交。如果兩個序列在雜交時包含一個或更多個錯配鹼基對,例如至少1、2、3、4或5個錯配鹼基對,則可以使用術語“基本上互補”來指第一序列相對於第二序列形成多達15、16、17、18、19、20、21、22、23、24、25、26、27、28、29或30個鹼基對(bp)的雙鏈體,同時保留在與其最終應用最相關的條件下雜交的能力,例如,通過RISC途徑抑制黃嘌呤脫氫酶(XDH)基因表達。術語“部分互補”在本文中可用於指核鹼基序列的雜交對中,第一多核苷酸的連續序列中鹼基的至少75%(但不是全部)會與第二多核苷酸的連續序列中相同數目的鹼基雜交。在一些實施方案中,“部分互補”是指第一多核苷酸的連續序列中至少76%、77%、78%、79%、80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%的鹼基會與第二多核苷酸的連續序列中相同數量的鹼基雜交。As used herein, the term "substantially complementary" means that in hybrid pairs of nucleobase sequences, at least about 85% (but not all) of the bases in the contiguous sequence of the first polynucleotide will be with the second polynucleotide. The same number of bases in a contiguous sequence of nucleotides hybridize. If two sequences contain one or more mismatched base pairs when hybridized, for example at least 1, 2, 3, 4 or 5 mismatched base pairs, the term "substantially complementary" may be used to refer to the first The sequence forms a duplex of up to 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, or 30 base pairs (bp) relative to the second sequence bodies while retaining the ability to hybridize under conditions most relevant to their end application, e.g., inhibition of xanthine dehydrogenase (XDH) gene expression via the RISC pathway. The term "partially complementary" may be used herein to refer to a hybrid pair of nucleobase sequences in which at least 75% (but not all) of the bases in the contiguous sequence of a first polynucleotide will be with those of a second polynucleotide. Hybridization of the same number of bases in a contiguous sequence. In some embodiments, "partially complementary" refers to at least 76%, 77%, 78%, 79%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% of the bases will match the Two polynucleotides hybridize to the same number of bases in a contiguous sequence.
術語“互補”、“完全互補”、“基本互補”和“部分互補”在本文中使用時可用於指黃嘌呤脫氫酶(XDH) dsRNA試劑的正義鏈與反義鏈之間的鹼基匹配、黃嘌呤脫氫酶(XDH) dsRNA試劑的反義鏈與靶黃嘌呤脫氫酶(XDH) mRNA的序列之間的鹼基匹配,或單鏈反義寡核苷酸與靶黃嘌呤脫氫酶(XDH) mRNA序列之間的鹼基匹配。應當理解,術語“黃嘌呤脫氫酶(XDH) dsRNA試劑的反義鏈”可以指與“黃嘌呤脫氫酶(XDH)反義多核苷酸試劑”相同的序列。The terms "complementary," "completely complementary," "substantially complementary," and "partially complementary" when used herein may be used to refer to the base matching between the sense and antisense strands of the Xanthine Dehydrogenase (XDH) dsRNA Reagent , xanthine dehydrogenase (XDH) Base matching between the antisense strand of the dsRNA reagent and the sequence of the target xanthine dehydrogenase (XDH) mRNA, or a single-stranded antisense oligonucleotide and the target xanthine dehydrogenase Base matching between enzyme (XDH) mRNA sequences. It should be understood that the term "antisense strand of xanthine dehydrogenase (XDH) dsRNA reagent" may refer to the same sequence as "xanthine dehydrogenase (XDH) antisense polynucleotide reagent".
如本文所用,在提及核酸序列時使用的術語“基本相同”或“基本同一性”是指核酸序列與參考序列相比,包含具有至少約85%或更高序列同一性的序列,優選至少90%、至少91%、至少92%、至少93%、至少94%、至少95%、至少96%、至少97%、至少98% 或至少99 %同一性。序列同一性的百分比通過在比對窗口上比較兩個序列的最佳比對來確定。百分比是通過以下方式來計算的:確定在兩個序列中出現相同核酸鹼基的位置數以產生匹配位置的數量;將匹配位置的數量除以比對窗口中的位置總數,然後將結果乘以 100,從而得出序列同一性的百分比。本文公開的發明包括與本文公開(例如,在表 1-3 中)的那些基本相同的核苷酸序列。在一些實施方案中,所述核苷酸序列與本文公開(例如,在表1-3中)的序列完全相同,或具有至少約 85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%的同一性。As used herein, the terms "substantially identical" or "substantially identical" when referring to a nucleic acid sequence means that the nucleic acid sequence contains a sequence that has at least about 85% or greater sequence identity compared to a reference sequence, preferably at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% identical. Percent sequence identity is determined by comparing the best alignment of two sequences over an alignment window. The percentage is calculated by determining the number of positions where the same nucleic acid base occurs in both sequences to yield the number of matching positions; dividing the number of matching positions by the total number of positions in the alignment window, and multiplying the result by 100, resulting in percent sequence identity. The inventions disclosed herein include nucleotide sequences that are substantially identical to those disclosed herein (eg, in Tables 1-3). In some embodiments, the nucleotide sequence is identical to, or at least about 85%, 86%, 87%, 88%, 89%, 90% identical to, a sequence disclosed herein (e.g., in Tables 1-3). %, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity.
如本文所用,術語“包含序列的鏈”是指包含核苷酸鏈的寡核苷酸,所述核苷酸鏈由使用標準核苷酸命名法指代的序列描述。如本文所用,術語“雙鏈RNA”或“dsRNA”指包含RNA分子或RNAi分子複合物的序列,所述分子或複合物具有包含兩條反向平行且基本或完全互補的核酸鏈的雜交雙鏈區,其分別被稱為相對於靶黃嘌呤脫氫酶(XDH)基因RNA 具有“正義”和“反義”方向。雙鏈區可以具有允許通過RISC途徑特異性降解靶標黃嘌呤脫氫酶(XDH)基因RNA的任何所需長度,但通常長度為9至30個鹼基對,例如長度為15-30個鹼基對。考慮到9到30個鹼基對之間的雙鏈體,雙鏈體可以是此範圍內的任何長度,例如,9、10、11、12、13、14、15、16、17、18、19、20、21、22 、23、24、25、26、27、28、29或30個鹼基對,以及其中的任何子範圍,包括但不限於15-30個鹼基對、15-26個鹼基對;15-23鹼基對、15-22鹼基對、15-21鹼基對、15-20鹼基對、15-19鹼基對、15-18鹼基對、15-17鹼基對、18-30個鹼基對、18-26個鹼基對、18-23個鹼基對、18-22個鹼基對、18-21個鹼基對、18-20個鹼基對、19-30個鹼基對、19-26個鹼基對、19-23個鹼基對、19-22個鹼基對、19-21個鹼基對、19-20個鹼基對、20-30個鹼基對、20-26個鹼基對、20-25個鹼基對、20-24個鹼基對、20-23個鹼基對、20-22個鹼基對、20-21個鹼基對、21-30個鹼基對、21-26個鹼基對、21-25個鹼基對、21-24個鹼基對、21-23個鹼基對或21-22個鹼基對。通過用切丁酶和類似酶加工在細胞中產生的黃嘌呤脫氫酶(XDH) dsRNA試劑的長度通常在19-22個鹼基對的範圍內。黃嘌呤脫氫酶(XDH) dsDNA劑的雙鏈區的一條鏈包含與靶黃嘌呤脫氫酶(XDH)基因RNA的區域基本互補的序列。形成雙鏈體結構的兩條鏈可以來自具有至少一個自身互補區的單個RNA分子,或者可以由兩個或更多個單獨的RNA分子形成。在雙鏈區由單個分子形成的情况下,該分子可以具有由單鏈核苷酸鏈在3'-末端的一條鏈和相應的5'-末端的另一條鏈形成的雙鏈體結構(本文稱為“髮夾環”)。在本發明的一些實施方案中,髮夾構型包含至少1、2、3、4、5、6、7、8、9、10、11、12、13、14、15、16、17、18、19、20 個或更多個未配對的核苷酸。當黃嘌呤脫氫酶(XDH) dsRNA試劑的基本互補的兩條鏈由單獨的 RNA 分子組成時,這些分子不需要共價連接,但也可以共價連接。當兩條鏈通過髮夾環以外的方式共價連接時,連接結構被稱為“接頭”。術語“siRNA”在本文中也用於指如本文所述的dsRNA試劑。As used herein, the term "strand comprising a sequence" refers to an oligonucleotide comprising a strand of nucleotides described by a sequence referred to using standard nucleotide nomenclature. As used herein, the term "double-stranded RNA" or "dsRNA" refers to a sequence comprising an RNA molecule or a complex of RNAi molecules having a hybridized double-stranded nucleic acid strand comprising two antiparallel and substantially or completely complementary nucleic acid strands. The strand regions, which are respectively termed "sense" and "antisense" orientations relative to the target xanthine dehydrogenase (XDH) gene RNA. The double-stranded region can be of any desired length that allows specific degradation of the target xanthine dehydrogenase (XDH) gene RNA by the RISC pathway, but is typically 9 to 30 base pairs in length, e.g. 15-30 bases in length right. Considering duplexes between 9 and 30 base pairs, duplexes can be any length within this range, e.g., 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29 or 30 base pairs, and any subrange therein, including but not limited to 15-30 base pairs, 15-26 base pairs; 15-23 base pairs, 15-22 base pairs, 15-21 base pairs, 15-20 base pairs, 15-19 base pairs, 15-18 base pairs, 15-17 Base pairs, 18-30 base pairs, 18-26 base pairs, 18-23 base pairs, 18-22 base pairs, 18-21 base pairs, 18-20 bases pair, 19-30 base pairs, 19-26 base pairs, 19-23 base pairs, 19-22 base pairs, 19-21 base pairs, 19-20 base pairs, 20-30 base pairs, 20-26 base pairs, 20-25 base pairs, 20-24 base pairs, 20-23 base pairs, 20-22 base pairs, 20- 21 base pairs, 21-30 base pairs, 21-26 base pairs, 21-25 base pairs, 21-24 base pairs, 21-23 base pairs, or 21-22 base pairs. The length of xanthine dehydrogenase (XDH) dsRNA reagents produced in cells by processing with Dicer and similar enzymes is typically in the range of 19-22 base pairs. One strand of the double-stranded region of the xanthine dehydrogenase (XDH) dsDNA agent contains a sequence that is substantially complementary to a region of the target xanthine dehydrogenase (XDH) gene RNA. The two strands forming a duplex structure can come from a single RNA molecule with at least one self-complementary region, or can be formed from two or more separate RNA molecules. In the case where the double-stranded region is formed from a single molecule, the molecule may have a duplex structure formed by one strand of the single-stranded nucleotide strand at the 3'-end and the corresponding other strand at the 5'-end (herein called a "hairpin loop"). In some embodiments of the invention, the hairpin configuration includes at least 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18 , 19, 20 or more unpaired nucleotides. When the two substantially complementary strands of the xanthine dehydrogenase (XDH) dsRNA reagent consist of separate RNA molecules, these molecules need not be covalently linked, but may be covalently linked. When two strands are covalently connected by means other than a hairpin loop, the connecting structure is called a "linker." The term "siRNA" is also used herein to refer to a dsRNA agent as described herein.
在本發明的一些實施方案中,黃嘌呤脫氫酶(XDH) dsRNA試劑可以包含在dsRNA試劑的一個或兩個末端具有未配對核苷酸或核苷酸類似物的正義和反義序列。沒有未配對核苷酸的末端被稱為“平末端”並且沒有核苷酸突出端。如果dsRNA試劑的兩端都是平末端,則dsRNA被稱為“平末端的”。在本發明的一些實施方案中,dsRNA試劑的第一末端是平末端的,在一些實施方案中,dsRNA試劑的第二末端是平末端的,並且在本發明的某些實施方案中,黃嘌呤脫氫酶(XDH) dsRNA試劑的兩個末端都是平末端的。In some embodiments of the invention, a xanthine dehydrogenase (XDH) dsRNA reagent can comprise sense and antisense sequences with unpaired nucleotides or nucleotide analogs at one or both ends of the dsRNA reagent. Ends without unpaired nucleotides are called "blunt ends" and have no nucleotide overhangs. If both ends of the dsRNA reagent are blunt-ended, the dsRNA is said to be "blunt-ended." In some embodiments of the invention, the first end of the dsRNA agent is blunt-ended, in some embodiments, the second end of the dsRNA agent is blunt-ended, and in certain embodiments of the invention, the xanthine Dehydrogenase (XDH) dsRNA reagent is blunt-ended on both ends.
在本發明的dsRNA試劑的一些實施方案中,dsRNA不具有一個或兩個平末端。在這種情况下,在dsRNA試劑的一條鏈的末端有至少一個未配對的核苷酸。例如,當dsRNA一條鏈的3'-末端延伸超出另一條鏈的5'-末端時,則存在核苷酸突出端,反之亦然。dsRNA 可包含至少1、2、3、4、5、6 或更多個核苷酸的突出端。核苷酸突出端可包含核苷酸/核苷類似物或由其組成,包括脫氧核苷酸/核苷。應當理解,在一些實施方案中,核苷酸突出端在dsRNA試劑的正義鏈上、在dsRNA試劑的反義鏈上,或在 dsRNA 試劑的兩端,突出端的核苷酸可存在於dsRNA的反義鏈或正義鏈的 5' 端、3' 端或兩端。在本發明的某些實施方案中,突出端中的一個或更多個核苷酸被核苷硫代磷酸酯替換。In some embodiments of the dsRNA reagents of the invention, the dsRNA does not have one or two blunt ends. In this case, there is at least one unpaired nucleotide at the end of one strand of the dsRNA reagent. For example, nucleotide overhangs exist when the 3'-end of one strand of dsRNA extends beyond the 5'-end of the other strand, and vice versa. dsRNA can contain overhangs of at least 1, 2, 3, 4, 5, 6, or more nucleotides. Nucleotide overhangs may comprise or consist of nucleotide/nucleoside analogs, including deoxynucleotides/nucleosides. It will be appreciated that in some embodiments, the nucleotide overhangs are on the sense strand of the dsRNA reagent, on the antisense strand of the dsRNA reagent, or at both ends of the dsRNA reagent, and the nucleotides of the overhangs may be present on the antisense strand of the dsRNA reagent. sense strand or the 5' end, 3' end or both ends of the sense strand. In certain embodiments of the invention, one or more nucleotides in the overhang are replaced with nucleoside phosphorothioates.
如本文所用,術語“反義鏈”或“引導鏈”是指包含與黃嘌呤脫氫酶(XDH)靶序列基本互補的區域的黃嘌呤脫氫酶(XDH) dsRNA試劑的鏈。如本文所用,術語“正義鏈”或“過客鏈”是指包含與黃嘌呤脫氫酶(XDH) dsRNA試劑的反義鏈的區域基本互補的區域的黃嘌呤脫氫酶(XDH) dsRNA試劑的鏈。 修飾 As used herein, the term "antisense strand" or "guide strand" refers to the strand of a xanthine dehydrogenase (XDH) dsRNA agent that contains a region that is substantially complementary to a xanthine dehydrogenase (XDH) target sequence. As used herein, the term "sense strand" or "passenger strand" refers to a xanthine dehydrogenase (XDH) dsRNA reagent that includes a region that is substantially complementary to a region of the antisense strand of the xanthine dehydrogenase (XDH) dsRNA reagent. chain. Modify
在本發明的一些實施方案中,黃嘌呤脫氫酶(XDH)基因RNAi劑的RNA被化學修飾以獲得增强的穩定性和/或一種或更多種其他有益特性。本發明的某些實施方案中的核酸可以通過本領域公知的方法合成和/或修飾,例如,見 “Current protocols in Nucleic Acid Chemistry," Beaucage, S. L. et al. (Eds.), John Wiley & Sons, Inc., New York, N.Y., USA,其作為參考在此並入本文。可以存在於本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑的某些實施方案中的修飾包括例如:(a)末端修飾,例如5'端修飾(磷酸化、綴合、反向連接等)、3'端修飾(綴合、DNA核苷酸、反向連接等);(b) 鹼基修飾,例如用穩定鹼基、去穩定鹼基或與擴展的配偶體庫進行鹼基配對的鹼基替換、缺失鹼基(無鹼基核苷酸)或綴合鹼基;(c) 糖修飾(例如,在2'位置或4'位置)或糖的替換;以及 (d) 骨架修飾,包括磷酸二酯鍵的修飾或替換。在本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑、黃嘌呤脫氫酶(XDH)反義多核苷酸和黃嘌呤脫氫酶(XDH)正義多核苷酸的某些實施方案中可用的RNA化合物的具體實例包括但不限於包含修飾骨架或沒有天然核苷間鍵聯的RNA。作為非限制性實例,具有骨架修飾的RNA在骨架中可以不具有磷原子。在其核苷間骨架中沒有磷原子的RNA可稱為寡核苷。在本發明的某些實施方案中,修飾的RNA在其核苷間骨架中具有磷原子。In some embodiments of the invention, the RNA of the xanthine dehydrogenase (XDH) gene RNAi agent is chemically modified to obtain enhanced stability and/or one or more other beneficial properties. Nucleic acids in certain embodiments of the invention can be synthesized and/or modified by methods well known in the art, for example, see "Current protocols in Nucleic Acid Chemistry," Beaucage, S. L. et al. (Eds.), John Wiley & Sons , Inc., New York, N.Y., USA, which is incorporated herein by reference. Modifications that may be present in certain embodiments of the xanthine dehydrogenase (XDH) dsRNA reagents of the invention include, for example: (a) terminal modifications, such as 5' end modifications (phosphorylation, conjugation, reverse ligation, etc.) , 3' end modification (conjugation, DNA nucleotides, reverse ligation, etc.); (b) base modification, such as with stabilizing bases, destabilizing bases, or bases for base pairing with an expanded partner library base substitutions, missing bases (abasic nucleotides), or conjugated bases; (c) sugar modifications (e.g., at the 2' position or 4' position) or substitutions of sugars; and (d) backbone modifications, including Modification or replacement of phosphodiester bonds. RNAs useful in certain embodiments of the xanthine dehydrogenase (XDH) dsRNA reagents, xanthine dehydrogenase (XDH) antisense polynucleotides, and xanthine dehydrogenase (XDH) sense polynucleotides of the invention Specific examples of compounds include, but are not limited to, RNAs containing modified backbones or without native internucleoside linkages. As a non-limiting example, RNA with backbone modifications may not have phosphorus atoms in the backbone. RNA that does not have a phosphorus atom in its internucleoside backbone is called an oligonucleotide. In certain embodiments of the invention, the modified RNA has a phosphorus atom in its internucleoside backbone.
應當理解,術語“RNA分子”或“RNA”或“核糖核酸分子”不僅包括在自然界中表達或發現的RNA分子,還包括RNA的類似物和衍生物,其包含一種或更多種如本文所述或本領域已知的核糖核苷酸/核糖核苷類似物或衍生物。術語“核糖核苷”和“核糖核苷酸”在本文中可互換使用。RNA分子可以在核鹼基結構或核糖-磷酸骨架結構中進行修飾(例如,如下文所述),並且包含核糖核苷類似物或衍生物的分子必須保留形成雙鏈體的能力。作為非限制性實例,RNA分子還可包含至少一種修飾的核糖核苷,其包括但不限於2'-甲氧基修飾的核苷、包含5'硫代磷酸酯基團的核苷、與膽固醇衍生物或十二烷酸雙癸醯胺基團相連的末端核苷、鎖核苷、無鹼基核苷、2'-脫氧-2'-氟修飾的核苷、2'-氨基修飾的核苷、2'-烷基修飾的核苷、嗎啉代核苷、氨基磷酸酯或包含核苷的非天然鹼基,或其任何組合。在本發明的一些實施方案中,RNA分子包含以下數量的修飾的核糖核苷:至少1、2、3、4、5、6、7、8、9、10、11、12、13、14、15、16、17、18、19、20或長達黃嘌呤脫氫酶(XDH) dsRNA 試劑分子的核糖核苷的全長。對於這種RNA分子中的多個修飾的核糖核苷中的每一個,修飾不必相同。It will be understood that the term "RNA molecule" or "RNA" or "ribonucleic acid molecule" includes not only RNA molecules expressed or found in nature, but also analogs and derivatives of RNA, which include one or more species as described herein. Ribonucleotide/ribonucleoside analogs or derivatives described above or known in the art. The terms "ribonucleoside" and "ribonucleotide" are used interchangeably herein. RNA molecules may be modified in the nucleobase structure or ribose-phosphate backbone structure (eg, as described below), and molecules containing ribonucleoside analogs or derivatives must retain the ability to form duplexes. As non-limiting examples, the RNA molecule may also comprise at least one modified ribonucleoside, including, but not limited to, 2'-methoxy modified nucleosides, nucleosides containing a 5' phosphorothioate group, and cholesterol Derivatives or terminal nucleosides linked to dodecanoic acid didecamide groups, locked nucleosides, abasic nucleosides, 2'-deoxy-2'-fluoro modified nucleosides, 2'-amino modified nucleosides glycosides, 2'-alkyl modified nucleosides, morpholino nucleosides, phosphoramidates, or non-natural bases containing nucleosides, or any combination thereof. In some embodiments of the invention, the RNA molecule contains the following number of modified ribonucleosides: at least 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20 or up to the full length of the ribonucleoside of the xanthine dehydrogenase (XDH) dsRNA reagent molecule. The modifications need not be the same for each of the multiple modified ribonucleosides in such an RNA molecule.
在一些實施方案中,本發明的dsRNA試劑、黃嘌呤脫氫酶(XDH)反義多核苷酸和/或黃嘌呤脫氫酶(XDH)正義多核苷酸可以包含一個或更多個獨立選擇的修飾核苷酸和/或一個或更多個獨立選擇的非磷酸二酯鍵。本文所用的術語“獨立選擇”用於指選定的要素,例如修飾的核苷酸、非磷酸二酯鍵等,是指兩個或更多個選定的要素可以彼此相同但不必彼此相同。如本文所用,“核苷酸鹼基”、“核苷酸”或“核鹼基”是雜環嘧啶或嘌呤化合物,其是所有核酸的標準成分,並且包括形成核苷酸的鹼基:腺嘌呤 (a)、鳥嘌呤 (g)、胞嘧啶 (c)、胸腺嘧啶 (t) 和尿嘧啶 (u)。核鹼基可進一步修飾以包括(但不旨在限制):通用鹼基、疏水性鹼基、混雜鹼基、尺寸擴大的鹼基和氟化鹼基。術語“核糖核苷酸”或“核苷酸”在本文中可用於指未修飾的核苷酸、修飾的核苷酸或替代部分。本領域技術人員將認識到,鳥嘌呤、胞嘧啶、腺嘌呤和尿嘧啶可以被其他部分替換,而不會顯著改變包含帶有這種替換部分的核苷酸的寡核苷酸的鹼基配對特性。In some embodiments, the dsRNA reagents, xanthine dehydrogenase (XDH) antisense polynucleotides and/or xanthine dehydrogenase (XDH) sense polynucleotides of the invention may comprise one or more independently selected Modify the nucleotide and/or one or more independently selected non-phosphodiester linkages. As used herein, the term "independently selected" is used to refer to selected elements, such as modified nucleotides, non-phosphodiester bonds, etc., meaning that two or more selected elements may be identical to each other but need not be identical to each other. As used herein, a "nucleotide base", "nucleotide" or "nucleobase" is a heterocyclic pyrimidine or purine compound that is a standard component of all nucleic acids and includes the bases that form nucleotides: adenine Purine (a), guanine (g), cytosine (c), thymine (t) and uracil (u). Nucleobases may be further modified to include, but are not intended to be limited to: universal bases, hydrophobic bases, hybrid bases, size-enlarged bases, and fluorinated bases. The term "ribonucleotide" or "nucleotide" may be used herein to refer to unmodified nucleotides, modified nucleotides, or alternative moieties. One skilled in the art will recognize that guanine, cytosine, adenine and uracil can be replaced by other moieties without significantly altering the base pairing of oligonucleotides containing nucleotides with such replaced moieties characteristic.
在一個實施方案中,預期用於本文所述的方法和組合物中的修飾的RNA是肽核酸(PNA),其具有形成所需雙鏈體結構並且允許或介導靶RNA經由RISC途徑的特異性降解的能力。在本發明的某些實施方案中,黃嘌呤脫氫酶(XDH)基因RNA干擾劑包括與靶黃嘌呤脫氫酶(XDH)基因RNA序列相互作用以指導靶黃嘌呤脫氫酶(XDH)基因RNA切割的單鏈RNA。In one embodiment, the modified RNA contemplated for use in the methods and compositions described herein is a peptide nucleic acid (PNA) that has the specificity to form the desired duplex structure and allow or mediate the passage of the target RNA via the RISC pathway. ability to degrade. In certain embodiments of the invention, the xanthine dehydrogenase (XDH) gene RNA interference agent includes a target xanthine dehydrogenase (XDH) gene RNA sequence that interacts with the target xanthine dehydrogenase (XDH) gene to direct the target xanthine dehydrogenase (XDH) gene. RNA cleavage of single-stranded RNA.
修飾的RNA骨架可以包含例如硫代磷酸酯、手性硫代磷酸酯、二硫代磷酸酯、磷酸三酯、氨基烷基磷酸三酯、甲基和其他烷基膦酸酯(包括 3'-亞烷基膦酸酯和手性膦酸酯)、次膦酸酯、氨基磷酸酯(包括3'-氨基氨基磷酸酯和氨基烷基氨基磷酸酯)、硫代氨基磷酸酯、硫代烷基膦酸酯、硫代烷基磷酸三酯,和硼酸磷酸酯(其具有正常3'-5' 連接的,以及這些的2'-5'連接類似物,以及具有倒置極性的那些,其中相鄰的核苷單元對以3'-5'至5'-3'或2'-5'至5'-2'形式連接)。還包括各種鹽、混合鹽和游離酸形式。製備含磷鍵的方法是本領域的常規實施手段,並且此類方法可用於製備本發明的某些修飾的黃嘌呤脫氫酶(XDH) dsRNA試劑、某些修飾的黃嘌呤脫氫酶(XDH)反義多核苷酸和/或某些修飾的黃嘌呤脫氫酶(XDH)正義多核苷酸。Modified RNA backbones may include, for example, phosphorothioates, chiral phosphorothioates, phosphorodithioates, phosphate triesters, aminoalkyl phosphate triesters, methyl and other alkyl phosphonates (including 3'- Alkylene phosphonates and chiral phosphonates), phosphinates, phosphoramidates (including 3'-aminophosphoramidates and aminoalkyl phosphoramidates), thiophosphates, thioalkyl Phosphonates, thioalkyl phosphate triesters, and boronic acid phosphates (which have the normal 3'-5' linkage, as well as the 2'-5' linkage analogs of these, and those with inverted polarity, where adjacent Pairs of nucleoside units are linked in a 3'-5' to 5'-3' or 2'-5' to 5'-2' format). Also included are various salts, mixed salts and free acid forms. Methods for preparing phosphorus-containing bonds are routine practices in the art, and such methods can be used to prepare certain modified xanthine dehydrogenase (XDH) dsRNA reagents, certain modified xanthine dehydrogenase (XDH) of the present invention ) antisense polynucleotides and/or certain modified xanthine dehydrogenase (XDH) sense polynucleotides.
其中不包含磷原子的修飾的RNA骨架具有由短鏈烷基或環烷基核苷間鍵聯、混合雜原子和烷基或環烷基核苷間鍵聯、或一個或更多個短鏈雜原子或雜環核苷間鍵聯形成的骨架。其包括具有嗎啉鍵的那些(部分由核苷的糖部分形成);矽氧烷骨架;硫化物、亞碸和碸骨架;甲乙醯和硫甲乙醯骨架;亞甲基甲乙醯和硫甲乙醯骨架;含有烯烴的骨架;氨基磺酸鹽骨架;亞甲基亞氨基和亞甲基肼基骨架;磺酸鹽和磺醯胺骨架;醯胺骨架;以及其他混合有N、O、S和CH 2成分的部分。製備不含磷原子的修飾的RNA骨架的方法在本領域中是常規實踐,並且此類方法可用於製備本發明的某些修飾的黃嘌呤脫氫酶(XDH) dsRNA試劑、某些修飾的黃嘌呤脫氫酶(XDH)反義多核苷酸和/或某些修飾的黃嘌呤脫氫酶(XDH)正義多核苷酸。 Modified RNA backbones that do not contain a phosphorus atom have structures consisting of short-chain alkyl or cycloalkyl internucleoside linkages, mixed heteroatoms and alkyl or cycloalkyl internucleoside linkages, or one or more short chains The backbone formed by the linkages between heteroatoms or heterocyclic nucleosides. They include those with morpholine bonds (formed in part from the sugar moiety of the nucleoside); siloxane skeletons; sulfide, triacetyl and triacetyl skeletons; methylacetyl and thiomethylacetyl skeletons; methylenemethacetyl and thiomethylacetyl skeletons Skeletons; skeletons containing olefins; sulfamate skeletons; methyleneimino and methylenehydrazino skeletons; sulfonate and sulfonamide skeletons; amide skeletons; and others mixed with N, O, S and CH 2 ingredient portion. Methods of preparing modified RNA backbones that do not contain phosphorus atoms are routine practice in the art, and such methods can be used to prepare certain modified xanthine dehydrogenase (XDH) dsRNA reagents, certain modified xanthine dehydrogenases of the present invention. Purine dehydrogenase (XDH) antisense polynucleotides and/or certain modified xanthine dehydrogenase (XDH) sense polynucleotides.
在本發明的某些實施方案中,RNA模擬物被包括在黃嘌呤脫氫酶(XDH) dsRNA、黃嘌呤脫氫酶(XDH)反義多核苷酸和/或黃嘌呤脫氫酶(XDH)正義多核苷酸中,例如但不限於用新基團替換核苷酸單元的糖和核苷間鍵聯(即骨架)。在此類實施方案中,保持鹼基單位以與合適的黃嘌呤脫氫酶(XDH)核酸靶化合物雜交。一種這樣的寡聚化合物(已被證明具有優異雜交特性的RNA模擬物),被稱為肽核酸(PNA)。在PNA化合物中,RNA 的糖骨架被含有醯胺的骨架,特別是氨乙基甘氨酸骨架取代。核鹼基被保留並直接或間接地與骨架醯胺部分的氮雜氮原子結合。製備RNA模擬物的方法是本領域常規實踐的,並且此類方法可用於製備本發明的某些修飾的黃嘌呤脫氫酶(XDH) dsRNA試劑。In certain embodiments of the invention, RNA mimics are included in xanthine dehydrogenase (XDH) dsRNA, xanthine dehydrogenase (XDH) antisense polynucleotides, and/or xanthine dehydrogenase (XDH) In a sense polynucleotide, for example, but not limited to, the sugar and internucleoside linkages (ie, backbone) of the nucleotide units are replaced with new groups. In such embodiments, base units are maintained for hybridization to a suitable xanthine dehydrogenase (XDH) nucleic acid target compound. One such oligomeric compound, an RNA mimetic that has been shown to have excellent hybridization properties, is called a peptide nucleic acid (PNA). In PNA compounds, the sugar backbone of RNA is replaced by an amide-containing backbone, specifically an aminoethylglycine backbone. The nucleobase is retained and bound directly or indirectly to the aza nitrogen atom of the amide moiety of the backbone. Methods of preparing RNA mimetics are routinely practiced in the art, and such methods can be used to prepare certain modified xanthine dehydrogenase (XDH) dsRNA reagents of the invention.
本發明的一些實施方案包括具有硫代磷酸酯骨架的RNA和具有雜原子骨架的寡核苷,特別是-CH 2-NH-CH 2-、-CH 2-N(CH 3)-O-CH 2-[稱為亞甲基(甲基亞氨基)或 MMI 骨架]、-CH 2-O-N(CH 3)-CH 2-、-CH 2-N(CH 3)-N(CH 3)-CH 2-以及-N(CH 3)-CH 2-[其中天然磷酸二酯骨架表示為-O-P-O-CH 2-]。製備具有硫代磷酸酯骨架的RNA和具有雜原子骨架的寡核苷的方法是本領域常規實踐的,並且此類方法可用於製備本發明的某些修飾的黃嘌呤脫氫酶(XDH) dsRNA試劑、某些黃嘌呤脫氫酶(XDH)反義多核苷酸和/或某些黃嘌呤脫氫酶(XDH)正義多核苷酸。 Some embodiments of the invention include RNAs with phosphorothioate backbones and oligonucleosides with heteroatom backbones, particularly -CH2- NH- CH2- , -CH2 -N( CH3 )-O-CH 2 -[called methylene (methylimino) or MMI skeleton], -CH 2 -ON(CH 3 )-CH 2 -, -CH 2 -N(CH 3 )-N(CH 3 )-CH 2 - and -N(CH 3 )-CH 2 - [where the natural phosphodiester backbone is represented as -OPO-CH 2 -]. Methods for preparing RNAs with phosphorothioate backbones and oligonucleosides with heteroatom backbones are routinely practiced in the art, and such methods can be used to prepare certain modified xanthine dehydrogenase (XDH) dsRNAs of the invention Reagents, certain xanthine dehydrogenase (XDH) antisense polynucleotides and/or certain xanthine dehydrogenase (XDH) sense polynucleotides.
修飾的RNA還可以包含一個或更多個取代的糖部分。本發明的黃嘌呤脫氫酶(XDH) dsRNA、黃嘌呤脫氫酶(XDH) 反義多核苷酸和/或黃嘌呤脫氫酶(XDH) 正義多核苷酸可在2'位置包含以下之一:OH;F;O-、S-、或N-烷基;O-、S-或N-烯基;O-、S-或N-炔基;或O-烷基-O-烷基,其中烷基、烯基和炔基可以是取代或未取代的C 1至C 10烷基或C 2至C 10烯基和炔基。示例性的合適的修飾包括:O[(CH 2) nO] mCH 3、O(CH 2) nOCH 3、O(CH 2) nNH 2、O(CH 2) nCH 3、O(CH 2) nONH 2、以及O(CH 2) nON[(CH 2) nCH 3)] 2,其中n和m為1至約10。在其他實施方案中,dsRNA在2'位置包括以下之一:C 1至C 10低級烷基、取代的低級烷基、烷芳基、芳烷基、O-烷芳基或O-芳烷基、SH、SCH 3、OCN、Cl、Br、CN、CF 3、OCF 3、SOCH 3、SO 2CH 3、ONO 2、NO 2、N 3、NH 2、雜環烷基、雜環烷芳基、氨基烷基氨基、聚烷基氨基;取代的甲矽烷基、RNA 裂解基團、報告基團、嵌入劑;用於改善黃嘌呤脫氫酶(XDH) dsRNA試劑的藥代動力學特性的基團;或用於改善黃嘌呤脫氫酶(XDH) dsRNA 試劑、黃嘌呤脫氫酶(XDH) 反義多核苷酸和/或黃嘌呤脫氫酶(XDH)正義多核苷酸的藥效學特性的基團,和其他具有類似性質的取代基。在一些實施方案中,修飾包括2'-甲氧基乙氧基(2'-O-CH 2CH 2OCH 3,也稱為2'-O-(2-甲氧基乙基)或2'-MOE)(Martin et al., Helv. Chim. Acta, 1995, 78:486-504),即烷氧基-烷氧基。另一種示例性修飾是2'-二甲氨基乙氧基乙氧基,即O(CH 2) 2ON(CH 3) 2基團,也稱為 2'-DMAOE,如下文實施例中所述;以及2'-二甲氨基乙氧基乙氧基(在本領域中也稱為 2'-O-二甲氨基乙氧基乙基或2'-DMAEOE),即2'-O-CH 2-O-CH 2-N(CH 2) 2。製備所描述的那些的修飾RNA的方法是本領域常規實踐的,並且此類方法可用於製備本發明的某些修飾的黃嘌呤脫氫酶(XDH) dsRNA試劑。 Modified RNA may also contain one or more substituted sugar moieties. The xanthine dehydrogenase (XDH) dsRNA, xanthine dehydrogenase (XDH) antisense polynucleotide and/or xanthine dehydrogenase (XDH) sense polynucleotide of the present invention may contain one of the following at the 2' position : OH; F; O-, S-, or N-alkyl; O-, S-, or N-alkenyl; O-, S-, or N-alkynyl; or O-alkyl-O-alkyl, Wherein the alkyl group, alkenyl group and alkynyl group may be substituted or unsubstituted C 1 to C 10 alkyl group or C 2 to C 10 alkenyl group and alkynyl group. Exemplary suitable modifications include: O[(CH 2 ) n O] m CH 3 , O(CH 2 ) n OCH 3 , O(CH 2 ) n NH 2 , O( CH 2 ) n CH 3 , O( CH 2 ) n ONH 2 , and O(CH 2 ) n ON [(CH 2 ) n CH 3 )] 2 , where n and m range from 1 to about 10. In other embodiments, the dsRNA includes one of the following at the 2' position: C 1 to C 10 lower alkyl, substituted lower alkyl, alkaryl, aralkyl, O-alkaryl, or O-aralkyl , SH, SCH 3 , OCN, Cl, Br, CN, CF 3 , OCF 3 , SOCH 3 , SO 2 CH 3 , ONO 2 , NO 2 , N 3 , NH 2 , heterocycloalkyl, heterocycloalkaryl , aminoalkylamino, polyalkylamino; substituted silyl group, RNA cleavage group, reporter group, intercalator; base used to improve the pharmacokinetic properties of xanthine dehydrogenase (XDH) dsRNA reagent group; or used to improve the pharmacodynamic properties of xanthine dehydrogenase (XDH) dsRNA reagents, xanthine dehydrogenase (XDH) antisense polynucleotides and/or xanthine dehydrogenase (XDH) sense polynucleotides groups, and other substituents with similar properties. In some embodiments, modifications include 2'-O-CH 2 CH 2 OCH 3 , also known as 2'-O-(2-methoxyethyl) or 2' -MOE) (Martin et al., Helv. Chim. Acta, 1995, 78:486-504), that is, alkoxy-alkoxy group. Another exemplary modification is 2'-dimethylaminoethoxyethoxy, the O( CH2 ) 2ON ( CH3 ) 2 group, also known as 2'-DMAOE, as described in the Examples below ; and 2'-dimethylaminoethoxyethoxy (also known in the art as 2'-O-dimethylaminoethoxyethyl or 2'-DMAEOE), i.e. 2'-O-CH 2 -O-CH 2 -N(CH 2 ) 2 . Methods of preparing modified RNAs such as those described are routinely practiced in the art, and such methods can be used to prepare certain modified xanthine dehydrogenase (XDH) dsRNA reagents of the invention.
其他修飾包括 2'-甲氧基(2'-OCH 3)、2'-氨基丙氧基 (2'-OCH 2CH 2CH 2NH 2)和2'-氟(2'-F)。類似的修飾也可以在本發明的黃嘌呤脫氫酶(XDH) dsRNA 試劑、黃嘌呤脫氫酶(XDH) 反義多核苷酸的RNA上的其他位置、黃嘌呤脫氫酶(XDH)正義多核苷酸和/或黃嘌呤脫氫酶(XDH)正義多核苷酸的其他位置,特別是3'末端核苷酸上或2'-5'連接的黃嘌呤脫氫酶(XDH) dsRNA、黃嘌呤脫氫酶(XDH)反義多核苷酸或黃嘌呤脫氫酶(XDH)正義多核苷酸中的糖的3'位置、和5'末端核苷酸的5'位置進行。黃嘌呤脫氫酶(XDH) dsRNA 試劑、黃嘌呤脫氫酶(XDH) 反義多核苷酸和/或黃嘌呤脫氫酶(XDH)正義多核苷酸也可以具有糖模擬物,例如代替呋喃戊糖的環丁基部分。製備例如所描述的那些的修飾RNA的方法是本領域常規實踐的,並且此類方法可用於製備本發明的某些修飾的黃嘌呤脫氫酶(XDH) dsRNA試劑、黃嘌呤脫氫酶(XDH)反義多核苷酸和/或黃嘌呤脫氫酶(XDH)正義多核苷酸。 Other modifications include 2'-methoxy (2'-OCH 3 ), 2'-aminopropoxy (2'-OCH 2 CH 2 CH 2 NH 2 ), and 2'-fluoro (2'-F). Similar modifications can also be made at other positions on the RNA of the xanthine dehydrogenase (XDH) dsRNA reagent, xanthine dehydrogenase (XDH) antisense polynucleotide, and xanthine dehydrogenase (XDH) sense polynucleotide of the present invention. dsRNA, xanthine Dehydrogenase (XDH) antisense polynucleotide or xanthine dehydrogenase (XDH) sense polynucleotide at the 3' position of the sugar and the 5' position of the 5' terminal nucleotide. Xanthine Dehydrogenase (XDH) dsRNA Reagent, Xanthine Dehydrogenase (XDH) Antisense Polynucleotide and/or The cyclobutyl portion of sugar. Methods of preparing modified RNAs such as those described are routinely practiced in the art, and such methods can be used to prepare certain modified xanthine dehydrogenase (XDH) dsRNA reagents, xanthine dehydrogenase (XDH) of the invention ) antisense polynucleotide and/or xanthine dehydrogenase (XDH) sense polynucleotide.
在一些實施方案中,黃嘌呤脫氫酶(XDH) dsRNA試劑、黃嘌呤脫氫酶(XDH)反義多核苷酸和/或黃嘌呤脫氫酶(XDH)正義多核苷酸可以包括核鹼基(在本領域中通常簡稱為“鹼基”)修飾或取代。如本文所用,“未修飾的”或“天然”核鹼基包括嘌呤鹼基腺嘌呤(A)和鳥嘌呤(G),以及嘧啶鹼基胸腺嘧啶(T)、胞嘧啶(C)和尿嘧啶(U)。修飾的核鹼基包括其他合成和天然核鹼基,例如 5-甲基胞嘧啶(5-me-C)、5-羥甲基胞嘧啶、黃嘌呤、次黃嘌呤、2-氨基腺嘌呤、6-甲基和其他腺嘌呤和鳥嘌呤的烷基衍生物、2-丙基和其他腺嘌呤和鳥嘌呤的烷基衍生物、2-硫尿嘧啶、2-硫胸腺嘧啶和2-硫胞嘧啶、5-鹵尿嘧啶和胞嘧啶、5-丙炔基尿嘧啶和胞嘧啶、6-偶氮尿嘧啶、胞嘧啶和胸腺嘧啶、5-尿嘧啶(假尿嘧啶)、4-硫尿嘧啶;8-鹵代、8-氨基、8-硫醇、8-硫代烷基、8-羥基以及其他8-取代的腺嘌呤和鳥嘌呤;5-鹵代,特別是5-溴、5-三氟甲基和其他5-取代的尿嘧啶和胞嘧啶;7-甲基鳥嘌呤和7-甲基腺嘌呤、8-氮雜鳥嘌呤和8-氮雜腺嘌呤、7-氮雜鳥嘌呤和7-氮雜腺嘌呤以及3-氮雜鳥嘌呤和3-氮雜腺嘌呤。可以包含在本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑的某些實施方案中的另外的核鹼基是本領域已知的,參見例如:Modified Nucleosides in Biochemistry, Biotechnology and Medicine, Herdewijn, P. Ed. Wiley-VCH, 2008; The Concise Encyclopedia Of Polymer Science And Engineering, pages 858-859, Kroschwitz, J. L, Ed. John Wiley & Sons, 1990, English et al., Angewandte Chemie, International Edition, 1991, 30, 613, Sanghvi, Y S., Chapter 15, dsRNA Research and Applications, pages 289-302, Crooke, S. T. and Lebleu, B., Ed., CRC Press, 1993。製備包含核鹼基修飾和/或取代的dsRNA、黃嘌呤脫氫酶(XDH)反義鏈多核苷酸和/或黃嘌呤脫氫酶(XDH)正義鏈多核苷酸(例如本文所述的那些)的方法是本領域常規實踐的,並且此類方法可用於製備本發明的某些修飾的黃嘌呤脫氫酶(XDH) dsRNA試劑、黃嘌呤脫氫酶(XDH)正義多核苷酸和/或黃嘌呤脫氫酶(XDH)反義多核苷酸。In some embodiments, the xanthine dehydrogenase (XDH) dsRNA agent, the xanthine dehydrogenase (XDH) antisense polynucleotide, and/or the xanthine dehydrogenase (XDH) sense polynucleotide can include nucleobases (often referred to as "base" in the art) modification or substitution. As used herein, "unmodified" or "natural" nucleobases include the purine bases adenine (A) and guanine (G), and the pyrimidine bases thymine (T), cytosine (C), and uracil (U). Modified nucleobases include other synthetic and natural nucleobases, such as 5-methylcytosine (5-me-C), 5-hydroxymethylcytosine, xanthine, hypoxanthine, 2-aminoadenine, 6-Methyl and other alkyl derivatives of adenine and guanine, 2-propyl and other alkyl derivatives of adenine and guanine, 2-thiouracil, 2-thiothymine and 2-thiocytosan Pyrimidine, 5-halouracil and cytosine, 5-propynyluracil and cytosine, 6-azouracil, cytosine and thymine, 5-uracil (pseudouracil), 4-thiouracil ; 8-halo, 8-amino, 8-thiol, 8-thioalkyl, 8-hydroxy and other 8-substituted adenine and guanine; 5-halo, especially 5-bromo, 5- Trifluoromethyl and other 5-substituted uracil and cytosine; 7-methylguanine and 7-methyladenine, 8-azaguanine and 8-azaadenine, 7-azaguanine and 7-azaadenine and 3-azaguanine and 3-azaadenine. Additional nucleobases that may be included in certain embodiments of the xanthine dehydrogenase (XDH) dsRNA reagents of the invention are known in the art, see for example: Modified Nucleosides in Biochemistry, Biotechnology and Medicine, Herdewijn, P . Ed. Wiley-VCH, 2008; The Concise Encyclopedia Of Polymer Science And Engineering, pages 858-859, Kroschwitz, J. L, Ed. John Wiley & Sons, 1990, English et al., Angewandte Chemie, International Edition, 1991 , 30, 613, Sanghvi, Y S., Chapter 15, dsRNA Research and Applications, pages 289-302, Crooke, S. T. and Lebleu, B., Ed., CRC Press, 1993. Preparation of dsRNA, xanthine dehydrogenase (XDH) antisense strand polynucleotides and/or xanthine dehydrogenase (XDH) sense strand polynucleotides (such as those described herein) comprising nucleobase modifications and/or substitutions ) methods are routinely practiced in the art, and such methods can be used to prepare certain modified xanthine dehydrogenase (XDH) dsRNA reagents, xanthine dehydrogenase (XDH) sense polynucleotides and/or Xanthine dehydrogenase (XDH) antisense polynucleotide.
本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑、黃嘌呤脫氫酶(XDH)反義多核苷酸和/或黃嘌呤脫氫酶(XDH)正義多核苷酸的某些實施方案包括經修飾以包括一種或更多種鎖核酸(LNA)的RNA。鎖核酸是具有這樣的修飾核糖部分的核苷酸,其包含額外的連接2'和4'碳的橋。這種結構有效地將核糖“鎖定”在 3'-內結構構象中。在本發明的黃嘌呤脫氫酶(XDH) dsRNA 試劑、黃嘌呤脫氫酶(XDH) 反義多核苷酸和/或黃嘌呤脫氫酶(XDH)正義多核苷酸中添加鎖核酸可以增加血清中的穩定性,並減少脫靶效應(Elmen, J. et al., (2005) Nucleic Acids Research 33(1):439-447; Mook, O R. et al., (2007)Mol Canc Ther 6(3):833-843; Grunweller, A. et al., (2003) Nucleic Acids Research 31(12):3185-3193)。製備包含鎖核酸的dsRNA試劑、黃嘌呤脫氫酶(XDH)反義多核苷酸和/或黃嘌呤脫氫酶(XDH)正義多核苷酸的方法是本領域常規實施的,並且此類方法可用於製備本發明的某些修飾的黃嘌呤脫氫酶(XDH) dsRNA試劑。本發明的黃嘌呤脫氫酶(XDH) dsRNA化合物、正義多核苷酸和/或反義多核苷酸的某些實施方案包括至少一種修飾的核苷酸,其中所述至少一種修飾的核苷酸包含:2'-甲氧核苷酸、2'-氟核苷酸、2'-脫氧核苷酸、2',3'-seco 核苷酸模擬物、鎖核苷酸、2'-F-阿拉伯糖核苷酸、2'-甲氧基乙基核苷酸、2'-氨基修飾的核苷酸、2'-烷基修飾的核苷酸、嗎啉代核苷酸和3'-Ome核苷酸、包含 5'-硫代磷酸酯基團的核苷酸,或與膽固醇衍生物或十二烷酸雙癸醯胺基團連接的末端核苷酸、2'-氨基修飾的核苷酸、氨基磷酸酯或包含核苷酸的非天然鹼基。在一些實施方案中,黃嘌呤脫氫酶(XDH) dsRNA化合物在反義鏈(在本文中也稱為引導鏈)的5’末端處包含E-乙烯基膦酸酯核苷酸。Certain embodiments of the xanthine dehydrogenase (XDH) dsRNA reagents, xanthine dehydrogenase (XDH) antisense polynucleotides, and/or xanthine dehydrogenase (XDH) sense polynucleotides of the invention include modifications to RNA that includes one or more locked nucleic acids (LNA). Locked nucleic acids are nucleotides with a modified ribose moiety that contains an additional bridge connecting the 2' and 4' carbons. This structure effectively "locks" ribose in the 3'-endostructural conformation. Adding locked nucleic acid to the xanthine dehydrogenase (XDH) dsRNA reagent, xanthine dehydrogenase (XDH) antisense polynucleotide and/or xanthine dehydrogenase (XDH) sense polynucleotide of the present invention can increase serum stability and reduce off-target effects (Elmen, J. et al., (2005) Nucleic Acids Research 33(1):439-447; Mook, O R. et al., (2007)Mol Canc Ther 6( 3):833-843; Grunweller, A. et al., (2003) Nucleic Acids Research 31(12):3185-3193). Methods of preparing dsRNA reagents comprising locked nucleic acids, xanthine dehydrogenase (XDH) antisense polynucleotides, and/or xanthine dehydrogenase (XDH) sense polynucleotides are routinely practiced in the art, and such methods can be used For preparing certain modified xanthine dehydrogenase (XDH) dsRNA reagents of the invention. Certain embodiments of the xanthine dehydrogenase (XDH) dsRNA compounds, sense polynucleotides, and/or antisense polynucleotides of the invention include at least one modified nucleotide, wherein the at least one modified nucleotide Contains: 2'-methoxynucleotide, 2'-fluoronucleotide, 2'-deoxynucleotide, 2',3'-seco nucleotide mimetic, locked nucleotide, 2'-F- Arabinonucleotides, 2'-methoxyethyl nucleotides, 2'-amino modified nucleotides, 2'-alkyl modified nucleotides, morpholino nucleotides and 3'-Ome Nucleotides, nucleotides containing a 5'-phosphorothioate group, or terminal nucleotides linked to cholesterol derivatives or dodecyl dodecylamide groups, 2'-amino modified nucleosides Acids, phosphoramidates, or unnatural bases containing nucleotides. In some embodiments, the xanthine dehydrogenase (XDH) dsRNA compound contains an E-vinylphosphonate nucleotide at the 5' end of the antisense strand (also referred to herein as the guide strand).
本發明的某些實施方案中,在黃嘌呤脫氫酶(XDH) dsRNA化合物、正義多核苷酸的3'和5'末端和/或反義多核苷酸的3'末端包含至少一種修飾的核苷酸,其中至少一種修飾的核苷酸包括:無鹼基核苷酸、核糖醇、反向核苷酸、反向無鹼基核苷酸、反向2'-OMe核苷酸、反向2'-脫氧核苷酸。本領域技術人員已知,在寡核苷酸末端包含無鹼基或反向無鹼基核苷酸可增强穩定性 (Czauderna et al. Structural variations and stabilizing modifications of synthetic siRNAs in mammalian cells. Nucleic Acids Res. 2003;31(11):2705-2716. doi:10.1093/nar/gkg393)。In certain embodiments of the invention, at least one modified core is included in the xanthine dehydrogenase (XDH) dsRNA compound, the 3' and 5' ends of the sense polynucleotide, and/or the 3' end of the antisense polynucleotide. nucleotides, wherein at least one modified nucleotide includes: abasic nucleotide, ribitol, reverse nucleotide, reverse abasic nucleotide, reverse 2'-OMe nucleotide, reverse 2'-deoxynucleotide. It is known to those skilled in the art that the inclusion of abasic or reverse abasic nucleotides at the termini of oligonucleotides can enhance stability (Czauderna et al. Structural variations and stabilizing modifications of synthetic siRNAs in mammalian cells. Nucleic Acids Res . 2003;31(11):2705-2716. doi:10.1093/nar/gkg393).
本發明的某些實施方案中,黃嘌呤脫氫酶(XDH) dsRNA化合物、反義多核苷酸包含至少一種修飾的核苷酸,其中所述至少一種修飾的核苷酸包含開環核酸核苷酸(UNA)或/和二醇核酸核苷酸(GNA)。本領域技術人員已知,UNA和GNA是熱不穩定化學修飾,可以顯著改善siRNA化合物的脫靶譜 (Janas, et al., Selection of GalNAc-conjugated siRNAs with limited off-target-driven rat hepatotoxicity. Nat Commun. 2018;9(1):723. doi:10.1038/s41467-018-02989-4; Laursen et al., Utilization of unlocked nucleic acid (UNA) to enhance siRNA performance in vitro and in vivo. Mol BioSyst. 2010;6:862–70)。In certain embodiments of the present invention, the xanthine dehydrogenase (XDH) dsRNA compound, antisense polynucleotide comprises at least one modified nucleotide, wherein the at least one modified nucleotide comprises an open-circuit nucleic acid nucleoside acid (UNA) or/and glycol nucleic acid nucleotide (GNA). Those skilled in the art know that UNA and GNA are thermally unstable chemical modifications that can significantly improve the off-target profile of siRNA compounds (Janas, et al., Selection of GalNAc-conjugated siRNAs with limited off-target-driven rat hepatotoxicity. Nat Commun 2018;9(1):723. doi:10.1038/s41467-018-02989-4; Laursen et al., Utilization of unlocked nucleic acid (UNA) to enhance siRNA performance in vitro and in vivo. Mol BioSyst. 2010; 6:862–70).
在某些實施方案中,本發明涉及用於治療的開環核酸(UNA)寡聚體。開環核酸(unlocked nucleic acid,UNA)是RNA的無環類似物,其中核糖環的C2'和C3'原子之間的鍵已被切斷。已經證明,摻入UNA對 siRNA基因沉默活性具有良好的耐受性,在某些情况下甚至可以增强其活性(Meghan A. et al. “Locked vs. unlocked nucleic acids (LNA vs. UNA): contrasting structures work towards common therapeutic goals”. Chem. Soc. Rev., 2011, 40, 5680–5689 )。 In certain embodiments, the invention relates to open nucleic acid (UNA) oligomers for use in therapy. Unlocked nucleic acid (UNA) is an acyclic analog of RNA in which the bond between the C2' and C3' atoms of the ribose ring has been severed. It has been shown that incorporation of UNA is well tolerated by siRNA gene silencing activity and in some cases can even enhance its activity (Meghan A. et al. “Locked vs. unlocked nucleic acids (LNA vs. UNA): contrasting structures work towards common therapeutic goals”. Chem. Soc. Rev., 2011, 40 , 5680–5689 ).
UNA是一種熱不穩定修飾,用UNA替換核糖核苷酸會降低鹼基配對强度和雙鏈體穩定性。將UNA策略性地放置在siRNA反義鏈的種子區域可以降低通過microRNA (miRNA)介導的基因沉默機制中的脫靶活性。miRNA主要通過反義種子區(從5'端開始的第2-8位)與靶mRNA之間的鹼基配對來識別靶基因,以進行基因抑制。每個miRNA都可能調節大量基因。RNA誘導沉默複合物(RISC)所加載的siRNA反義鏈也可以通過miRNA介導的機制潜在地調節大量非預期基因。因此,在siRNA的種子區域中加入熱不穩定的核苷酸,如UNA,可以降低脫靶活性(Lam JK, Chow MY, Zhang Y, Leung SW. siRNA Versus miRNA as Therapeutics for Gene Silencing. Mol Ther Nucleic Acids. 2015 Sep 15;4(9):e252. doi: 10.1038/mtna.2015.23. PMID: 26372022; PMCID: PMC4877448.)。具體而言,這樣的RNA寡核苷酸或RNA寡核苷酸的複合物在種子區域含有至少一個UNA核苷酸單體(Narendra Vaish et al. “Improved specificity of gene silencing by siRNAs containing unlocked nucleobase analog”. Nucleic Acids Research, 2011, Vol. 39, No. 5 1823–1832)。 UNA is a heat-labile modification, and replacing ribonucleotides with UNA will reduce base pairing strength and duplex stability. Strategic placement of UNA in the seed region of the siRNA antisense strand can reduce off-target activity in gene silencing mechanisms mediated by microRNA (miRNA). miRNA mainly recognizes the target gene through base pairing between the antisense seed region (positions 2-8 starting from the 5' end) and the target mRNA for gene suppression. Each miRNA has the potential to regulate a large number of genes. The siRNA antisense strand loaded by the RNA-induced silencing complex (RISC) can also potentially regulate a large number of unintended genes through a miRNA-mediated mechanism. Therefore, adding thermally unstable nucleotides, such as UNA, to the seed region of siRNA can reduce off-target activity (Lam JK, Chow MY, Zhang Y, Leung SW. siRNA Versus miRNA as Therapeutics for Gene Silencing. Mol Ther Nucleic Acids . 2015 Sep 15;4(9):e252. doi: 10.1038/mtna.2015.23. PMID: 26372022; PMCID: PMC4877448.). Specifically, such RNA oligonucleotides or complexes of RNA oligonucleotides contain at least one UNA nucleotide monomer in the seed region (Narendra Vaish et al. “Improved specificity of gene silencing by siRNAs containing unlocked nucleobase analog ”. Nucleic Acids Research, 2011, Vol. 39, No. 5 1823–1832 ).
根據本技術方案,在RNA寡核苷酸或RNA寡核苷酸的複合物中並入UNA的潜在優勢包括但不限於:According to this technical solution, potential advantages of incorporating UNA in RNA oligonucleotides or complexes of RNA oligonucleotides include, but are not limited to:
1. 減少脫靶活性。在siRNA種子區添加UNA會降低種子區的鹼基配對强度,從而降低由micro-RNA機制引起的潜在脫靶活性。1. Reduce off-target activity. Adding UNA to the siRNA seed region will reduce the base pairing strength of the seed region, thereby reducing potential off-target activity caused by the micro-RNA mechanism.
2. UNA在siRNA活性方面具有良好的耐受性。在某些情况下,UNA 可以導致活性增强。2. UNA is well tolerated in terms of siRNA activity. In some cases, UNA can lead to increased activity.
可用於本技術方案的示例性UNA單體包括但不限於: 。 Exemplary UNA monomers that can be used in this technical solution include, but are not limited to: .
Invab是反向無鹼基(脫氧核糖)殘基。例如,在一些實施方案中,有義鏈或反義鏈可包括“末端帽”,其如本文所用是可以在本文公開的RNAi試劑的鏈的一個或多個末端處並入的非核苷酸化合物或其他部分,並且在一些情况下可以為RNAi試劑提供某些有利特性,諸如例如針對核酸外切酶降解的保護。在一些實施方案中,反向無鹼基殘基(Invab)作為末端帽添加 (參見,例如,F. Czauderna, Nucleic Acids Res., 2003, 31(11), 2705-16)。末端帽通常是本領域中已知的,在一些實施方案中,末端帽存在於有義鏈的5'末端處、3'末端處或5'和3'末端兩者處。 Invab is the reverse abasic (deoxyribose) residue. For example, in some embodiments, the sense or antisense strand can include a "terminal cap," which as used herein is a non-nucleotide compound that can be incorporated at one or more ends of a strand of an RNAi agent disclosed herein or other moieties, and in some cases may provide certain advantageous properties to the RNAi agent, such as, for example, protection against exonuclease degradation. In some embodiments, an inverted abasic residue (Invab) is added as a terminal cap (see, eg, F. Czauderna, Nucleic Acids Res., 2003, 31(11), 2705-16). Terminal caps are generally known in the art and, in some embodiments, are present at the 5' end, the 3' end, or both the 5' and 3' ends of the sense strand.
本發明的某些實施方案中,黃嘌呤脫氫酶(XDH) dsRNA化合物、反義多核苷酸包含至少一種修飾的核苷酸,其中所述至少一種修飾的核苷酸包含異甘露糖醇核苷酸。在某些實施方案中,正義鏈在3'或和5'末端分別獨立地包含一個異甘露糖醇殘基及其立體異構體。特定的包含異甘露糖醇殘基及其立體異構體的核苷酸的實例包括但不限於: 、 、 、 、 、 、 、 、 、 、和 ,其中短語“Olig”各自獨立地代表多核苷酸部分。示例性異甘露糖醇殘基 (imann) 包括但不限於以下: 或 。在某些實施方案中,異甘露醇殘基 (imann) 還可以使用其立體異構體替代。在某些實施方案中,正義鏈在3'或和5'末端分別獨立地包含一個異甘露醇殘基 (imann),並可選地進一步包含5'-末端綴合的靶向基團,例如,靶向基團N-乙醯-半乳糖胺,優選為上述GLS-15,示例性結構如下: ,其中短語“Olig”各自獨立地代表多核苷酸部分。 In certain embodiments of the invention, the xanthine dehydrogenase (XDH) dsRNA compound, antisense polynucleotide, comprises at least one modified nucleotide, wherein the at least one modified nucleotide comprises an isomannitol core glycosides. In certain embodiments, the sense strand contains an isomannitol residue and its stereoisomers at the 3' or 5' ends, respectively. Examples of specific nucleotides containing isomannitol residues and their stereoisomers include, but are not limited to: , , , , , , , , , ,and , where the phrase "Olig" each independently represents a polynucleotide moiety. Exemplary isomannitol residues (imann) include, but are not limited to, the following: or . In certain embodiments, the isomannitol residue (imann) can also be replaced by its stereoisomer. In certain embodiments, the sense strand includes an isomannitol residue (imann) at the 3' or 5' ends, respectively, and optionally further includes a 5'-end conjugated targeting group, e.g. , targeting group N-acetyl-galactosamine, preferably the above-mentioned GLS-15, the exemplary structure is as follows: , where the phrase "Olig" each independently represents a polynucleotide moiety.
可以在本發明的某些實施方案的黃嘌呤脫氫酶(XDH) dsRNA試劑、黃嘌呤脫氫酶(XDH)反義多核苷酸和/或黃嘌呤脫氫酶(XDH)正義多核苷酸的RNA中包含另一種修飾,其包括分別增强黃嘌呤脫氫酶(XDH) dsRNA試劑、黃嘌呤脫氫酶(XDH)反義多核苷酸和/或黃嘌呤脫氫酶(XDH)正義多核苷酸的一種或更多種特徵的一種或更多種配體、部分或與RNA化學連接的綴合物。可以增强的特徵的非限制性實例是:黃嘌呤脫氫酶(XDH) dsRNA試劑、黃嘌呤脫氫酶(XDH)反義多核苷酸和/或黃嘌呤脫氫酶(XDH)正義多核苷酸活性、細胞分布、黃嘌呤脫氫酶(XDH) dsRNA 試劑的遞送、黃嘌呤脫氫酶(XDH) dsRNA 試劑的藥代動力學特性以及黃嘌呤脫氫酶(XDH) dsRNA 試劑的細胞攝取。在本發明的一些實施方案中,黃嘌呤脫氫酶(XDH)dsRNA試劑包含一個或更多個靶向基團或連接基團,在本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑的某些實施方案中,其與正義鏈綴合。靶向基團的非限制性實例是包含N-乙醯基-半乳糖胺(GalNAc)的化合物。術語“遞送分子”、“靶向基團”、“靶向劑”、“連接劑”、“靶向化合物”和“靶向配體”在本文中可互換使用。在本發明的某些實施方案中,黃嘌呤脫氫酶(XDH) dsRNA試劑包含與正義鏈的5'-末端綴合的靶向化合物。在本發明的某些實施方案中,黃嘌呤脫氫酶(XDH) dsRNA試劑包含與正義鏈的3'-末端綴合的靶向化合物。在本發明的一些實施方案中,黃嘌呤脫氫酶(XDH) dsRNA試劑包含含有GalNAc的靶向基團。 在本發明的某些實施方案中,黃嘌呤脫氫酶(XDH) dsRNA試劑不包含與正義鏈的3'-末端和5'-末端之一或兩者綴合的靶向化合物。在本發明的某些實施方案中,黃嘌呤脫氫酶(XDH) dsRNA試劑不包含與正義鏈的5'-末端和3'-末端之一或兩者綴合的含有GalNAc的靶向化合物。The xanthine dehydrogenase (XDH) dsRNA reagents, xanthine dehydrogenase (XDH) antisense polynucleotides, and/or xanthine dehydrogenase (XDH) sense polynucleotides that can be used in certain embodiments of the invention The RNA contains another modification that includes enhancement of the xanthine dehydrogenase (XDH) dsRNA reagent, the xanthine dehydrogenase (XDH) antisense polynucleotide, and/or the xanthine dehydrogenase (XDH) sense polynucleotide, respectively. One or more ligands, moieties or conjugates chemically linked to RNA of one or more characteristics. Non-limiting examples of characteristics that can be enhanced are: xanthine dehydrogenase (XDH) dsRNA reagents, xanthine dehydrogenase (XDH) antisense polynucleotides, and/or xanthine dehydrogenase (XDH) sense polynucleotides Activity, cellular distribution, delivery of xanthine dehydrogenase (XDH) dsRNA reagent, pharmacokinetic properties of xanthine dehydrogenase (XDH) dsRNA reagent, and cellular uptake of xanthine dehydrogenase (XDH) dsRNA reagent. In some embodiments of the invention, the xanthine dehydrogenase (XDH) dsRNA reagents comprise one or more targeting groups or linking groups, in certain aspects of the xanthine dehydrogenase (XDH) dsRNA reagents of the invention. In some embodiments, it is conjugated to the sense strand. Non-limiting examples of targeting groups are compounds containing N-acetyl-galactosamine (GalNAc). The terms "delivery molecule", "targeting group", "targeting agent", "linker", "targeting compound" and "targeting ligand" are used interchangeably herein. In certain embodiments of the invention, the xanthine dehydrogenase (XDH) dsRNA reagent comprises a targeting compound conjugated to the 5'-end of the sense strand. In certain embodiments of the invention, the xanthine dehydrogenase (XDH) dsRNA reagent comprises a targeting compound conjugated to the 3'-end of the sense strand. In some embodiments of the invention, the xanthine dehydrogenase (XDH) dsRNA reagent comprises a GalNAc-containing targeting group. In certain embodiments of the invention, the xanthine dehydrogenase (XDH) dsRNA reagent does not comprise a targeting compound conjugated to one or both of the 3'-end and 5'-end of the sense strand. In certain embodiments of the invention, the xanthine dehydrogenase (XDH) dsRNA reagent does not comprise a GalNAc-containing targeting compound conjugated to one or both of the 5'-end and 3'-end of the sense strand.
另外的靶向和連接劑是本領域衆所周知的,例如,可用於本發明的某些實施方案中的靶向和連接劑包括但不限於脂質部分,例如膽固醇部分 (Letsinger et al., Proc. Natl. Acid. Sci. USA, 1989, 86: 6553-6556)、膽酸 (Manoharan et al., Biorg. Med. Chem. Let., 1994, 4:1053-1060)、硫醚,例如beryl-S-三苯甲基硫醇(Manoharan et al., Ann. N.Y. Acad. Sci., 1992, 660:306-309; Manoharan et al., Biorg. Med. Chem. Let., 1993, 3:2765-2770)、硫膽固醇(Oberhauser et al., Nucl. Acids Res., 1992, 20:533-538)、脂肪鏈,例如十二烷二醇或十一烷基殘基(Saison-Behmoaras et al., EMBO J, 1991, 10:1111-1118; Kabanov et al., FEBS Lett., 1990, 259:327-330; Svinarchuk et al., Biochimie, 1993, 75:49-54)、磷脂,例如二-十六烷基-rac-甘油或三乙基-銨1,2-二-O-十六烷基-rac-甘油-3-膦酸酯(Manoharan et al., Tetrahedron Lett., 1995, 36:3651-3654; Shea et al., Nucl. Acids Res., 1990, 18:3777-3783)、聚胺或聚乙二醇鏈(Manoharan et al., Nucleosides & Nucleotides, 1995, 14:969-973)或金剛烷乙酸(Manoharan et al., Tetrahedron Lett., 1995, 36:3651-3654)、棕櫚醯部分(Mishra et al., Biochim. Biophys. Acta, 1995, 1264:229-237)或十八胺或己氨基-羰氧基膽固醇部分(Crooke et al., J. Pharmacol. Exp. Ther., 1996, 277:923-937)。Additional targeting and linking agents are well known in the art and, for example, targeting and linking agents useful in certain embodiments of the present invention include, but are not limited to, lipid moieties such as cholesterol moieties (Letsinger et al., Proc. . Natl. Acid. Sci. USA, 1989, 86: 6553-6556), cholic acid (Manoharan et al., Biorg. Med. Chem. Let., 1994, 4:1053-1060), thioethers, such as beryl- S-Tritylmercaptan (Manoharan et al., Ann. N.Y. Acad. Sci., 1992, 660:306-309; Manoharan et al., Biog. Med. Chem. Let., 1993, 3:2765- 2770), thiocholesterol (Oberhauser et al., Nucl. Acids Res., 1992, 20:533-538), aliphatic chains such as dodecanediol or undecyl residues (Saison-Behmoaras et al., EMBO J, 1991, 10:1111-1118; Kabanov et al., FEBS Lett., 1990, 259:327-330; Svinarchuk et al., Biochimie, 1993, 75:49-54), phospholipids, such as di- Hexadecyl-rac-glycerol or triethylammonium 1,2-di-O-hexadecyl-rac-glycerol-3-phosphonate (Manoharan et al., Tetrahedron Lett., 1995, 36:3651 -3654; Shea et al., Nucl. Acids Res., 1990, 18:3777-3783), polyamine or polyethylene glycol chains (Manoharan et al., Nucleosides & Nucleotides, 1995, 14:969-973) or Adamantane acetic acid (Manoharan et al., Tetrahedron Lett., 1995, 36:3651-3654), palmitate moiety (Mishra et al., Biochim. Biophys. Acta, 1995, 1264:229-237) or octadecylamine or Hexamino-carbonyloxycholesterol moiety (Crooke et al., J. Pharmacol. Exp. Ther., 1996, 277:923-937).
包含黃嘌呤脫氫酶(XDH) dsRNA試劑、黃嘌呤脫氫酶(XDH)反義多核苷酸和/或黃嘌呤脫氫酶(XDH)正義多核苷酸的組合物的某些實施方案可包含改變黃嘌呤脫氫酶(XDH) dsRNA試劑的分布、靶向等性質的配體。在包含本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑的組合物的一些實施方案中,例如與不存在此類配體的物種相比,配體增加對選定靶標(例如分子、細胞或細胞類型、區室,例如細胞或器官區室、組織、器官或身體區域)的親和力。在本發明的組合物和/或方法中有用的配體可以是天然存在的物質,例如蛋白質(例如人血清白蛋白(HSA)、低密度脂蛋白(LDL)或球蛋白)、碳水化合物(例如,葡聚糖、支鏈澱粉、幾丁質、殼聚糖、菊粉、環糊精或透明質酸)或脂質。配體也可以是重組或合成分子,例如合成聚合物,例如合成聚氨基酸或聚胺。 聚氨基酸的實例是聚賴氨酸(PLL)、聚L-天冬氨酸、聚L-谷氨酸、苯乙烯-馬來酸酐共聚物、聚(L-丙交酯-共-乙醇酸)共聚物、二乙烯基醚-馬來酸酐共聚物、N-(2-羥丙基)甲基丙烯醯胺共聚物(HMPA)、聚乙二醇(PEG)、聚乙烯醇(PVA)、聚氨酯、聚(2-乙基丙烯酸)、N-異丙基丙烯醯胺聚合物,或聚磷嗪。多胺的示例包括:聚乙烯亞胺、聚賴氨酸(PLL)、精胺、亞精胺、多胺、假肽-多胺、擬肽多胺、樹枝狀多胺、精氨酸、脒、魚精蛋白、陽離子脂質、陽離子卟啉、多胺的季鹽或α螺旋肽。Certain embodiments of compositions comprising a xanthine dehydrogenase (XDH) dsRNA agent, a xanthine dehydrogenase (XDH) antisense polynucleotide, and/or a xanthine dehydrogenase (XDH) sense polynucleotide can comprise Ligands that change the distribution, targeting and other properties of xanthine dehydrogenase (XDH) dsRNA reagents. In some embodiments of compositions comprising a xanthine dehydrogenase (XDH) dsRNA agent of the invention, e.g., the ligand increases the response to a selected target (e.g., molecule, cell, or cell) compared to a species in which such ligand is not present. Type, compartment, such as a cell or organ compartment, tissue, organ, or body region) affinity. Ligands useful in the compositions and/or methods of the invention may be naturally occurring substances such as proteins (e.g. human serum albumin (HSA), low density lipoprotein (LDL) or globulin), carbohydrates (e.g. , dextran, amylopectin, chitin, chitosan, inulin, cyclodextrin or hyaluronic acid) or lipids. Ligands may also be recombinant or synthetic molecules, such as synthetic polymers, such as synthetic polyamino acids or polyamines. Examples of polyamino acids are polylysine (PLL), polyL-aspartic acid, polyL-glutamic acid, styrene-maleic anhydride copolymer, poly(L-lactide-co-glycolic acid) Copolymer, divinyl ether-maleic anhydride copolymer, N-(2-hydroxypropyl)methacrylamide copolymer (HMPA), polyethylene glycol (PEG), polyvinyl alcohol (PVA), polyurethane , poly(2-ethylacrylic acid), N-isopropylacrylamide polymer, or polyphosphazine. Examples of polyamines include: polyethylenimine, polylysine (PLL), spermine, spermidine, polyamines, pseudopeptide-polyamines, peptidomimetic polyamines, dendritic polyamines, arginine, amidine , protamine, cationic lipids, cationic porphyrins, quaternary salts of polyamines or α-helical peptides.
本發明的組合物和/或方法中包含的配體可包含靶向基團,其非限制性實例為細胞或組織靶向劑,例如,凝集素、糖蛋白、脂質或蛋白質,例如結合特定細胞類型如腎細胞或肝細胞的抗體。靶向基團可以是促甲狀腺素、促黑素、凝集素、糖蛋白、表面活性蛋白A、黏蛋白碳水化合物、多價乳糖、多價半乳糖、N-乙醯-半乳糖胺、N-乙醯-葡糖胺多價甘露糖、多價岩藻糖、糖基化聚氨基酸、多價半乳糖、轉鐵蛋白、雙膦酸鹽、聚谷氨酸鹽、聚天冬氨酸、脂質、膽固醇、類固醇、膽汁酸、葉酸、維生素B12、維生素A、生物素或RGD肽或RGD肽模擬物。Ligands comprised in the compositions and/or methods of the present invention may comprise targeting groups, non-limiting examples of which are cell or tissue targeting agents such as lectins, glycoproteins, lipids or proteins, e.g. binding to specific cells Types of antibodies such as kidney cells or liver cells. Targeting groups can be thyrotropin, melanogen, lectin, glycoprotein, surfactant protein A, mucin carbohydrate, polyvalent lactose, polyvalent galactose, N-acetyl-galactosamine, N- Acetyl-glucosamine polyvalent mannose, polyvalent fucose, glycosylated polyamino acids, polyvalent galactose, transferrin, bisphosphonates, polyglutamate, polyaspartic acid, lipids , cholesterol, steroids, bile acids, folic acid, vitamin B12, vitamin A, biotin or RGD peptide or RGD peptide mimetic.
配體的其他實例包括染料、嵌入劑(例如吖啶)、交聯劑(例如補骨脂素、絲裂黴素 C)、卟啉(TPPC4、texaphyrin、Sapphyrin)、多環芳烴(例如吩嗪、二氫吩嗪);人工核酸內切酶(例如 EDTA)、親脂性分子,例如膽固醇、膽酸、金剛烷乙酸、1-芘丁酸、二氫睾酮、1,3-雙-O(十六烷基)甘油、香葉氧基己基、十六烷基甘油、冰片、薄荷醇、1,3-丙二醇、十七烷基、棕櫚酸、肉豆蔻酸、O3-(油醯基)石膽酸、O3-(油醯基)膽酸、二甲氧基三苯甲基或吩噁嗪和肽綴合物(例如,觸角肽、Tat肽)、烷化劑、磷酸鹽、氨基、巰基、PEG(例如,PEG-40K)、MPEG、[MPEG]2、聚氨基、烷基、取代烷基、放射性標記物、酶、半抗原(例如生物素)、轉運/吸收促進劑(例如阿司匹林、維生素 E、葉酸)、合成核糖核酸酶(例如咪唑、雙咪唑、組胺、咪唑簇、吖啶-咪唑偶聯物、四氮雜大環的Eu3+複合物)、二硝基苯基、HRP或AP。Other examples of ligands include dyes, intercalators (e.g., acridines), cross-linkers (e.g., psoralen, mitomycin C), porphyrins (TPPC4, texaphyrin, Sapphyrin), polycyclic aromatic hydrocarbons (e.g., phenazines) , dihydrophenazine); artificial endonucleases (such as EDTA), lipophilic molecules such as cholesterol, cholic acid, adamantane acetic acid, 1-pyrenebutyric acid, dihydrotestosterone, 1,3-bis-O (ten Hexadecyl)glycerin, geranyloxyhexyl, cetylglycerin, borneol, menthol, 1,3-propanediol, heptadecyl, palmitic acid, myristic acid, O3-(oleyl)lithogallstone Acids, O3-(oleyl)cholic acid, dimethoxytrityl or phenoxazine and peptide conjugates (e.g., antennal peptide, Tat peptide), alkylating agents, phosphates, amino groups, thiol groups, PEG (e.g., PEG-40K), MPEG, [MPEG]2, polyamino, alkyl, substituted alkyl, radiolabel, enzyme, hapten (e.g., biotin), transport/absorption enhancer (e.g., aspirin, vitamin E, folic acid), synthetic ribonuclease (such as imidazole, bisimidazole, histamine, imidazole cluster, acridine-imidazole conjugate, Eu3+ complex of tetraaza macrocycle), dinitrophenyl, HRP or AP .
本發明的組合物和/或方法中包括的配體可以是蛋白質,例如糖蛋白或肽,例如對共配體具有特定親和力的分子,或抗體,例如與特定細胞類型如癌細胞、內皮細胞、心肌細胞 或骨細胞結合的抗體。在本發明的組合物和/或方法的實施方案中有用的配體可以是激素或激素受體。在本發明的組合物和/或方法的實施方案中有用的配體可以是脂質、凝集素、碳水化合物、維生素、輔酶、多價乳糖、多價半乳糖、N-乙醯-半乳糖胺、N-乙醯-葡糖胺多價甘露糖或多價岩藻糖。在本發明的組合物和/或方法的實施方案中有用的配體可以是例如通過破壞細胞的細胞骨架(例如,通過破壞細胞的微管、微絲和/或中間絲)而增加黃嘌呤脫氫酶(XDH)dsRNA試劑向細胞中的攝取的物質。此類試劑的非限制性實例是:taxon、長春新鹼、長春鹼、細胞鬆弛素、諾考達唑、japlakinolide、latrunculin A、鬼筆環肽、swinholide A、indanocine和myoservin。Ligands included in the compositions and/or methods of the present invention may be proteins, such as glycoproteins or peptides, such as molecules with specific affinity for the co-ligand, or antibodies, such as with specific cell types such as cancer cells, endothelial cells, Antibodies that bind to cardiomyocytes or bone cells. Ligands useful in embodiments of the compositions and/or methods of the invention may be hormones or hormone receptors. Ligands useful in embodiments of the compositions and/or methods of the invention may be lipids, lectins, carbohydrates, vitamins, coenzymes, polyvalent lactose, polyvalent galactose, N-acetyl-galactosamine, N-acetyl-glucosamine polyvalent mannose or polyvalent fucose. Ligands useful in embodiments of the compositions and/or methods of the present invention may be those that increase xanthine depletion, for example, by disrupting the cytoskeleton of the cell (e.g., by disrupting the microtubules, microfilaments, and/or intermediate filaments of the cell). Hydrogenase (XDH) uptake of dsRNA reagents into cells. Non-limiting examples of such agents are: taxon, vincristine, vinblastine, cytochalasin, nocodazole, japlakinolide, latrunculin A, phalloidin, swinholide A, indanocine and myoservin.
在一些實施方案中,與本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑連接的配體用作藥代動力學(PK)調節劑。 可用於本發明的組合物和方法的PK調節劑的實例包括但不限於:親脂劑、膽汁酸、類固醇、磷脂類似物、肽、蛋白質結合劑、PEG、維生素、膽固醇、脂肪酸、膽酸、石膽酸、二烷基甘油酯、二醯基甘油酯、磷脂、鞘脂、萘普生、布洛芬、維生素E、生物素、結合血清蛋白的適體等。還已知包含許多硫代磷酸酯鍵的寡核苷酸與血清蛋白結合,因此,在骨架中包含多個硫代磷酸酯鍵的短寡核苷酸,例如約5個鹼基、10個鹼基、15個鹼基或20個鹼基的寡核苷酸也可用作本發明的組合物和/或方法中的配體。 黃嘌呤脫氫酶( XDH ) dsRNA 試劑組合物 In some embodiments, ligands linked to the xanthine dehydrogenase (XDH) dsRNA agents of the invention serve as pharmacokinetic (PK) modulators. Examples of PK modulators useful in the compositions and methods of the present invention include, but are not limited to: lipophilic agents, bile acids, steroids, phospholipid analogs, peptides, protein binders, PEG, vitamins, cholesterol, fatty acids, bile acids, Lithocholic acid, dialkyl glycerides, digyl glycerides, phospholipids, sphingolipids, naproxen, ibuprofen, vitamin E, biotin, aptamers that bind to serum proteins, etc. Oligonucleotides containing many phosphorothioate linkages are also known to bind to serum proteins, therefore short oligonucleotides containing multiple phosphorothioate linkages in the backbone, e.g. about 5 bases, 10 bases Base, 15 base or 20 base oligonucleotides may also be used as ligands in the compositions and/or methods of the invention. Xanthine Dehydrogenase ( XDH ) dsRNA Reagent Composition
在本發明的一些實施方案中,黃嘌呤脫氫酶(XDH) dsRNA試劑在組合物中。本發明的組合物可包含一種或更多種黃嘌呤脫氫酶(XDH) dsRNA試劑和任選的一種或更多種藥學上可接受的載體、遞送劑、靶向劑、可檢測標簽等,根據本發明方法的一些實施方案可用的靶向劑的非限制性實例是將本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑引導至和/或進入待治療細胞的試劑。靶向劑的選擇將取决於以下要素:黃嘌呤脫氫酶(XDH) 相關疾病或病症的性質,以及靶細胞類型。在一個非限制性實例中,在本發明的一些實施方案中,可能需要將黃嘌呤脫氫酶(XDH) dsRNA試劑靶向至和/或進入肝細胞。應當理解,在本發明方法的一些實施方案中,治療劑包含僅具有遞送劑的黃嘌呤脫氫酶(XDH) dsRNA試劑,例如包含N-乙醯半乳糖胺(GalNAc)的遞送劑,而沒有任何附加的連接元件。例如,在本發明的一些方面,黃嘌呤脫氫酶(XDH) dsRNA試劑可以連接到包含GalNAc的遞送化合物上,並且包含在含有藥學上可接受載體的組合物中,並且在沒有任何連接至黃嘌呤脫氫酶(XDH) dsRNA試劑的可檢測標記或靶向劑等的情况下施用至細胞或對象。In some embodiments of the invention, a xanthine dehydrogenase (XDH) dsRNA agent is in the composition. The composition of the present invention may comprise one or more xanthine dehydrogenase (XDH) dsRNA reagents and optionally one or more pharmaceutically acceptable carriers, delivery agents, targeting agents, detectable labels, etc., Non-limiting examples of targeting agents useful according to some embodiments of the methods of the invention are agents that direct the xanthine dehydrogenase (XDH) dsRNA agent of the invention to and/or into the cells to be treated. The choice of targeting agent will depend on the nature of the xanthine dehydrogenase (XDH)-related disease or condition, and the target cell type. In one non-limiting example, in some embodiments of the invention, it may be desirable to target xanthine dehydrogenase (XDH) dsRNA agents to and/or into hepatocytes. It will be appreciated that in some embodiments of the present methods, the therapeutic agent comprises a xanthine dehydrogenase (XDH) dsRNA agent with only a delivery agent, such as a delivery agent comprising N-acetylgalactosamine (GalNAc), but not Any additional connecting elements. For example, in some aspects of the invention, a xanthine dehydrogenase (XDH) dsRNA agent can be linked to a GalNAc-containing delivery compound and included in a composition containing a pharmaceutically acceptable carrier, and without any linkage to the xanthine dehydrogenase (XDH) dsRNA agent. Purine dehydrogenase (XDH) dsRNA reagents, detectable labels or targeting agents, etc. are administered to cells or subjects.
在本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑與一種或更多種遞送劑、靶向劑、標記劑等一起施用和/或連接到其上的情况下,本領域技術人員能夠瞭解並能夠選擇和使用適合的試劑用於本發明的方法中。在本發明的某些方法中可以使用標記試劑來確定黃嘌呤脫氫酶(XDH) dsRNA試劑在細胞和組織中的位置,並且可用於確定已在本發明的方法中施用的包含黃嘌呤脫氫酶(XDH) dsRNA試劑的治療組合物的細胞、組織或器官位置。接附和使用標記試劑如酶標記、染料、放射性標記等的手段是本領域公知的。應當理解,在本發明的組合物和方法的一些實施方案中,標記試劑連接至黃嘌呤脫氫酶(XDH) dsRNA試劑中所包含的正義多核苷酸和反義多核苷酸之一或兩者。 黃嘌呤脫氫酶( XDH ) dsRNA 試劑和黃嘌呤脫氫酶( XDH )反義多核苷酸試劑的遞送 Where the xanthine dehydrogenase (XDH) dsRNA reagents of the present invention are administered with and/or linked to one or more delivery agents, targeting agents, labeling agents, etc., those skilled in the art will be able to understand and Suitable reagents can be selected and used for use in the methods of the invention. Labeling reagents can be used in certain methods of the invention to determine the location of xanthine dehydrogenase (XDH) dsRNA reagents in cells and tissues, and can be used to determine the location of xanthine dehydrogenase-containing dsRNA reagents that have been administered in the methods of the invention. Cell, tissue or organ location of the therapeutic composition of the enzyme (XDH) dsRNA agent. Means for attaching and using labeling reagents such as enzyme labels, dyes, radioactive labels, etc. are well known in the art. It will be appreciated that in some embodiments of the compositions and methods of the invention, the labeling reagent is linked to one or both of the sense and antisense polynucleotides contained in the xanthine dehydrogenase (XDH) dsRNA reagent. . Delivery of Xanthine Dehydrogenase ( XDH ) dsRNA Reagents and Xanthine Dehydrogenase ( XDH ) Antisense Polynucleotide Reagents
本發明方法的某些實施方案包括將黃嘌呤脫氫酶(XDH)dsRNA試劑遞送到細胞中。 如本文所用,術語“遞送”是指促進或影響細胞攝取或吸收。黃嘌呤脫氫酶(XDH) dsRNA試劑的吸收或攝取可通過獨立的擴散或活性細胞過程來發生,或通過使用可與本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑相關的遞送劑、靶向劑等來進行。適用於本發明方法的遞送方式包括但不限於體內遞送,其中將黃嘌呤脫氫酶(XDH) dsRNA試劑注射到組織部位或全身給藥。在本發明的一些實施方案中,黃嘌呤脫氫酶(XDH) dsRNA試劑連接至遞送劑。Certain embodiments of the methods of the invention include delivering a xanthine dehydrogenase (XDH) dsRNA agent into the cell. As used herein, the term "delivery" means promoting or affecting cellular uptake or absorption. Absorption or uptake of the xanthine dehydrogenase (XDH) dsRNA agent can occur by independent diffusion or active cellular processes, or through the use of delivery agents, targets, which can be associated with the xanthine dehydrogenase (XDH) dsRNA agent of the invention. Proceed to the agent and so on. Modes of delivery suitable for use in the methods of the present invention include, but are not limited to, in vivo delivery, wherein the xanthine dehydrogenase (XDH) dsRNA agent is injected into a tissue site or administered systemically. In some embodiments of the invention, a xanthine dehydrogenase (XDH) dsRNA agent is linked to the delivery agent.
可用於將黃嘌呤脫氫酶(XDH) dsRNA試劑遞送至細胞、組織和/或對象的方法的非限制性實例包括:黃嘌呤脫氫酶(XDH) dsRNA-GalNAc綴合物、SAMiRNA技術、基於LNP的遞送方法和裸RNA遞送。 這些和其他遞送方法已在本領域成功地用於遞送治療性RNAi試劑以治療各種疾病和病症,例如但不限於:肝病、急性間歇性卟啉症(AIP)、血友病、肺纖維化等。多種遞送方式的詳細信息可在出版物中找到,例如:Nikam, R.R. & K. R. Gore (2018) Nucleic Acid Ther, 28 (4), 209-224 Aug 2018; Springer A.D. & S.F. Dowdy (2018) Nucleic Acid Ther. Jun 1; 28(3): 109–118; Lee, K. et al., (2018) Arch Pharm Res, 41(9), 867-874; 和Nair, J.K. et al., (2014) J. Am. Chem. Soc. 136:16958-16961,其內容均以引用方式並入本文。Non-limiting examples of methods that can be used to deliver xanthine dehydrogenase (XDH) dsRNA agents to cells, tissues and/or subjects include: xanthine dehydrogenase (XDH) dsRNA-GalNAc conjugates, SAMiRNA technology, based on LNP delivery methods and naked RNA delivery. These and other delivery methods have been used successfully in the art to deliver therapeutic RNAi agents to treat a variety of diseases and conditions, such as, but not limited to: liver disease, acute intermittent porphyria (AIP), hemophilia, pulmonary fibrosis, etc. . Detailed information on various delivery methods can be found in publications such as: Nikam, R.R. & K. R. Gore (2018) Nucleic Acid Ther, 28 (4), 209-224 Aug 2018; Springer A.D. & S.F. Dowdy (2018) Nucleic Acid Ther . Jun 1; 28(3): 109–118; Lee, K. et al., (2018) Arch Pharm Res, 41(9), 867-874; and Nair, J.K. et al., (2014) J. Am. Chem. Soc. 136:16958-16961, the contents of which are incorporated herein by reference.
本發明的一些實施方案包括使用脂質納米顆粒(LNP)將本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑遞送至細胞、組織和/或對象。LNP 通常用於體內遞送 黃嘌呤脫氫酶(XDH)dsRNA 試劑,包括治療性 黃嘌呤脫氫酶(XDH) dsRNA 試劑。使用LNP或其他遞送劑的一個好處是,當使用LNP或其他遞送劑遞送至對象時,黃嘌呤脫氫酶(XDH)基因RNA劑的穩定性增加。在本發明的一些實施方案中,LNP包含負載有一種或更多種本發明的黃嘌呤脫氫酶(XDH)基因RNAi分子的陽離子LNP。將包含黃嘌呤脫氫酶(XDH)基因RNAi分子的 LNP施用於對象,LNP及其接附的黃嘌呤脫氫酶(XDH)基因RNAi分子通過胞吞作用被細胞攝取,它們的存在導致RNAi觸發分子的釋放,從而介導RNAi。Some embodiments of the invention include the use of lipid nanoparticles (LNPs) to deliver the xanthine dehydrogenase (XDH) dsRNA agent of the invention to cells, tissues and/or subjects. LNPs are commonly used to deliver xanthine dehydrogenase (XDH) dsRNA reagents in vivo, including therapeutic xanthine dehydrogenase (XDH) dsRNA reagents. One benefit of using LNP or other delivery agents is the increased stability of the xanthine dehydrogenase (XDH) gene RNA agent when delivered to a subject using LNP or other delivery agents. In some embodiments of the invention, the LNPs comprise cationic LNPs loaded with one or more xanthine dehydrogenase (XDH) gene RNAi molecules of the invention. LNP containing a xanthine dehydrogenase (XDH) gene RNAi molecule is administered to a subject. The LNP and its attached xanthine dehydrogenase (XDH) gene RNAi molecule are taken up by cells via endocytosis, and their presence results in RNAi triggering. release of molecules, thereby mediating RNAi.
可用於本發明的實施方案以將本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑遞送至細胞、組織和/或對象的遞送劑的另一個非限制性實例是:包含GalNAc的試劑,其與本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑連接並將黃嘌呤脫氫酶(XDH) dsRNA試劑遞送至細胞、組織和/或對象。PCT申請WO2020191183A1 中公開了可用於本發明的方法和組合物的某些實施方案中的某些包含GalNAc的其他遞送劑的實例。可用於本發明的組合物和方法中以將黃嘌呤脫氫酶(XDH) dsRNA試劑遞送至細胞的GalNAc 靶向配體的非限制性實例是靶向配體簇。在此提出的靶向配體簇的實例如:具有磷酸二酯鍵的GalNAc配體(GLO)和具有硫代磷酸酯鍵的GalNAc配體(GLS)。術語“GLX-n”在本文中可用於表示所連接的含GalNAc的化合物舉例並不局限於是以下化合物:GLS-1、GLS-2、GLS-3、GLS-4、GLS-5、GLS-6、GLS-7、GLS-8、GLS-9、GLS-10、GLS-11、GLS-12、GLS-13、GLS-14、GLS-15、GLS-16、GLO-1、GLO-2、GLO-3、GLO-4、GLO-5、GLO-6、GLO-7、GLO-8、GLO-9、GLO-10、GLO-11、GLO-12、GLO-13、GLO-14、GLO-15和GLO-16中的任一種,每個的結構如下所示,下圖中GalNAc靶向配體與本發明的RNAi劑的連接位置在每個靶向配體的最右側。應當理解,本發明的任何RNAi和dsRNA分子都可以連接到GLS-1、GLS-2、GLS-3、GLS-4、GLS-5、GLS-6、GLS-7、GLS-8、GLS-9、GLS-10、GLS-11、GLS-12、GLS-13、GLS-14、GLS-15、GLS-16、GLO-1、GLO-2、GLO-3、GLO-4、GLO-5、GLO-6、GLO-7、GLO-8、GLO-9、GLO-10、GLO-11、GLO-12、GLO-13、GLO-14、GLO-15和GLO-16上,以下是GLO-1到GLO-16和GLS-1到GLS-16 的結構。
“雜環烷基”表示具有指定數目的環原子的非芳族的部分飽和的或完全飽和的環(例如,3-10 或 3-7 元雜環烷基),所述環原子由一個或多個選自 N、O 和 S 的雜原子(例如, 1、2、3 或 4 個雜原子)組成,且其餘的環原子為碳。5 元雜環烷基是具有 5 個 環原子的雜環烷基。6 元雜環烷基是具有 6 個環原子的雜環烷基。雜環烷基可以是單環或多環(例如,二環、三環)的。雜環烷基的例子包括氧雜環丙基、氮雜環丙基、氮雜環丁基、吡咯烷基、咪唑烷基、吡唑烷基、呱啶基、呱嗪基、 嗎啉基和硫代嗎啉基。此外,多環雜環烷基的一個環可以為芳族的(例如,芳基或雜芳基),只要所述多環雜環烷基經由非芳族碳或氮原子結合至母體結構。例如,1,2,3,4-四氫喹啉-1-基(其中所述部分經 由非芳族氮原子結合至母體結構)被認為是雜環烷基,而 1,2,3,4-四氫喹啉-8-基 (其中所述部分經由芳族碳原子結合至母體結構)不被認為是雜環烷基。低級雜環烷烴一般是指 C3-6 個單環,在無特殊說明情况下,低級雜環烷基一般可優先為完全飽和的碳環。在本發明的一些實施方案中,體內遞送也可以通過β-葡聚糖遞送系統,例如美國專利No. 5,032,401和5,607,677, 以及美國公布No. 2005/0281781中描述的那些,它們的全部內容通過引用並入本文。也可以使用本領域已知的方法例如電穿孔和脂質轉染將黃嘌呤脫氫酶(XDH)基因RNAi試劑體外引入細胞。在本發明方法的某些實施方案中,黃嘌呤脫氫酶(XDH) dsRNA在沒有靶向劑的情况下被遞送。這些RNA可以作為“裸”RNA分子遞送。作為非限制性實例,本發明的黃嘌呤脫氫酶(XDH) dsRNA可以在包含RNAi試劑但不包含靶向劑(例如 GalNAc 靶向化合物)的藥物組合物中施用於對象,以治療對象的黃嘌呤脫氫酶(XDH)相關疾病或病症,例如痛風。"Heterocycloalkyl" means a nonaromatic partially saturated or fully saturated ring (e.g., 3-10 or 3-7 membered heterocycloalkyl) having the specified number of ring atoms consisting of one or Composed of multiple heteroatoms (eg, 1, 2, 3, or 4 heteroatoms) selected from N, O, and S, and the remaining ring atoms are carbon. 5-membered heterocycloalkyl is a heterocycloalkyl group with 5 ring atoms. 6-membered heterocycloalkyl is a heterocycloalkyl group with 6 ring atoms. Heterocycloalkyl groups may be monocyclic or polycyclic (eg, bicyclic, tricyclic). Examples of heterocycloalkyl groups include oxanyl, aziridyl, azetidinyl, pyrrolidinyl, imidazolidinyl, pyrazolidinyl, pyridinyl, pyridazinyl, morpholinyl and Thiomorpholinyl. Additionally, one ring of a polycyclic heterocycloalkyl group may be aromatic (eg, aryl or heteroaryl) so long as the polycyclic heterocycloalkyl group is bonded to the parent structure via a nonaromatic carbon or nitrogen atom. For example, 1,2,3,4-tetrahydroquinolin-1-yl (where the moiety is bonded to the parent structure via a non-aromatic nitrogen atom) is considered a heterocycloalkyl group, while 1,2,3,4 - Tetrahydroquinolin-8-yl (where the moiety is bonded to the parent structure via an aromatic carbon atom) is not considered a heterocycloalkyl group. Lower heterocycloalkanes generally refer to C3-6 monocyclic rings. Unless otherwise specified, lower heterocycloalkyl groups can generally be preferably fully saturated carbocyclic rings. In some embodiments of the invention, in vivo delivery may also be by beta-glucan delivery systems, such as those described in U.S. Patent Nos. 5,032,401 and 5,607,677, and U.S. Publication No. 2005/0281781, the entire contents of which are incorporated by reference. Incorporated herein. The xanthine dehydrogenase (XDH) gene RNAi agent can also be introduced into cells in vitro using methods known in the art such as electroporation and lipofection. In certain embodiments of the methods of the invention, the xanthine dehydrogenase (XDH) dsRNA is delivered without a targeting agent. These RNAs can be delivered as "naked" RNA molecules. As a non-limiting example, the xanthine dehydrogenase (XDH) dsRNA of the present invention can be administered to a subject in a pharmaceutical composition containing an RNAi agent but not a targeting agent (e.g., a GalNAc targeting compound) to treat xanthine in the subject. Purine dehydrogenase (XDH)-related diseases or conditions, such as gout.
應當理解,除了本文描述的某些遞送方式之外,其他RNAi遞送方式可以與本文描述的黃嘌呤脫氫酶(XDH)基因RNAi試劑和治療方法的實施方案結合使用,例如但不限於本文描述的那些和本領域中使用的那些。It will be appreciated that in addition to certain delivery modalities described herein, other RNAi delivery modalities may be used in conjunction with embodiments of the xanthine dehydrogenase (XDH) gene RNAi agents and therapeutic methods described herein, such as, but not limited to, those described herein. those and those used in the field.
本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑可以以有效降低細胞和/或對象中黃嘌呤脫氫酶(XDH)多肽的水平和活性的量和方式施用於對象。在本發明方法的一些實施方案中,將一種或更多種黃嘌呤脫氫酶(XDH) dsRNA試劑施用於細胞和/或對象以治療與黃嘌呤脫氫酶(XDH)表達和活性相關的疾病或病症。在一些實施方案中,本發明的方法包括向需要此類治療的對象施用一種或更多種黃嘌呤脫氫酶(XDH) dsRNA試劑以減輕對象中與黃嘌呤脫氫酶(XDH)表達相關的疾病或病症。可以施用本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑以降低體外、離體和體內細胞中的一種或更多種中的黃嘌呤脫氫酶(XDH)表達和/或活性。The xanthine dehydrogenase (XDH) dsRNA agents of the invention can be administered to a subject in an amount and in a manner effective to reduce the level and activity of the xanthine dehydrogenase (XDH) polypeptide in the cell and/or subject. In some embodiments of the methods of the invention, one or more xanthine dehydrogenase (XDH) dsRNA agents are administered to cells and/or subjects to treat diseases associated with xanthine dehydrogenase (XDH) expression and activity or illness. In some embodiments, methods of the invention include administering to a subject in need of such treatment one or more xanthine dehydrogenase (XDH) dsRNA agents to alleviate symptoms associated with xanthine dehydrogenase (XDH) expression in the subject. Disease or illness. The xanthine dehydrogenase (XDH) dsRNA agent or xanthine dehydrogenase (XDH) antisense polynucleotide agent of the invention can be administered to reduce xanthine in one or more of cells in vitro, ex vivo, and in vivo Dehydrogenase (XDH) expression and/or activity.
在本發明的一些實施方案中,通過將黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑遞送(例如引入)細胞中來降低細胞中黃嘌呤脫氫酶(XDH)多肽的水平並因此降低其活性。靶向劑和方法可用於幫助將黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑遞送至對象內的特定細胞類型、細胞亞型、器官、空間區域,和/或細胞內的亞細胞區域。黃嘌呤脫氫酶(XDH) dsRNA試劑可以在本發明的某些方法中單獨地或與一種或更多種另外的黃嘌呤脫氫酶(XDH) dsRNA試劑組合施用。在一些實施方案中,向對象施用2、3、4或更多種獨立選擇的黃嘌呤脫氫酶(XDH) dsRNA試劑。 在本發明的某些實施方案中,將黃嘌呤脫氫酶(XDH) dsRNA試劑與一種或更多種用於治療黃嘌呤脫氫酶(XDH)相關疾病或病症的另外的治療方案聯合施用於對象以治療黃嘌呤脫氫酶(XDH)相關疾病或病症。另外的治療方案的非限制性實例是:施用一種或更多種本發明的黃嘌呤脫氫酶(XDH)反義多核苷酸、施用非黃嘌呤脫氫酶(XDH) dsRNA治療劑和行為改變。可以在以下一個或更多個時間施用另外的治療方案:在施用本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑之前、同時和之後。應當理解,本文所用的“同時”是指在零時間的5分鐘內、零時間的10分鐘內、零時間的30分鐘內、零時間的45分鐘內和零時間的60分鐘內,其中“零時間”是向對象施用本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑的時間。非黃嘌呤脫氫酶(XDH) dsRNA 治療劑的非限制性實例是:另外的治療劑,例如別嘌醇、羥嘌呤、非布索坦或白介素-1β(IL-1β)拮抗劑,優選地,所述白介素-1β拮抗劑選自卡那單抗或利納西普(rilonacept), 從而治療患有將從黃嘌呤脫氫酶(XDH)減少中受益的疾病的受試者表達,或上述任何的組合,及配製成藥劑組合的治療高尿酸血症、痛風、非酒精性脂肪肝疾病(NAFLD)、非酒精性脂肪性肝炎(NASH)、代謝紊亂、胰島素抵抗、心血管疾病、2型糖尿病、Lesch Nyhan症候群、肝醣儲積症(GSD),以及與氧化應激有關的疾病或其他XDH相關疾病的治療劑。行為改變的非限制性實例是:飲食方案、諮詢和鍛煉方案。這些和其他治療劑以及行為改變是本領域已知的,並且可用於治療對象的黃嘌呤脫氫酶(XDH)疾病或病症,並且還可以與一種或更多種本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑組合,向對象給藥以治療黃嘌呤脫氫酶(XDH)疾病或病症。向細胞或對象施用以治療黃嘌呤脫氫酶(XDH)相關疾病或病症的本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑可以與一種或更多種其他治療劑或活性成分以協同方式起作用,從而增加一種或更多種治療劑或活性成分的有效性和/或增加黃嘌呤脫氫酶(XDH) dsRNA試劑治療黃嘌呤脫氫酶(XDH)相關疾病或病症的有效性。In some embodiments of the invention, xanthine dehydration in the cell is reduced by delivering (eg, introducing) a xanthine dehydrogenase (XDH) dsRNA agent or a xanthine dehydrogenase (XDH) antisense polynucleotide agent into the cell. Hydrogenase (XDH) polypeptide levels and therefore reduce its activity. Targeting agents and methods can be used to facilitate the delivery of xanthine dehydrogenase (XDH) dsRNA agents or xanthine dehydrogenase (XDH) antisense polynucleotide agents to specific cell types, cell subtypes, organs, spaces within a subject regions, and/or subcellular regions within cells. The xanthine dehydrogenase (XDH) dsRNA agent can be administered in certain methods of the invention alone or in combination with one or more additional xanthine dehydrogenase (XDH) dsRNA agents. In some embodiments, 2, 3, 4, or more independently selected xanthine dehydrogenase (XDH) dsRNA agents are administered to the subject. In certain embodiments of the invention, a xanthine dehydrogenase (XDH) dsRNA agent is administered in combination with one or more additional treatment regimens for the treatment of xanthine dehydrogenase (XDH)-related diseases or conditions. Targeted for the treatment of xanthine dehydrogenase (XDH) related diseases or conditions. Non-limiting examples of additional treatment regimens are: administration of one or more xanthine dehydrogenase (XDH) antisense polynucleotides of the invention, administration of non-xanthine dehydrogenase (XDH) dsRNA therapeutics, and behavioral modification . Additional treatment regimens may be administered at one or more of the following times: before, simultaneously with, and after administration of the xanthine dehydrogenase (XDH) dsRNA agent of the invention. It should be understood that "simultaneously" used in this article refers to within 5 minutes of zero time, within 10 minutes of zero time, within 30 minutes of zero time, within 45 minutes of zero time, and within 60 minutes of zero time, where "zero time" "Time" is the time at which the xanthine dehydrogenase (XDH) dsRNA agent of the invention is administered to the subject. Non-limiting examples of non-xanthine dehydrogenase (XDH) dsRNA therapeutics are: additional therapeutics such as allopurinol, hydroxypurine, febuxostat or interleukin-1β (IL-1β) antagonists, preferably , the interleukin-1β antagonist is selected from canakinumab or rilonacept, thereby treating a subject with a disease that would benefit from a reduction in xanthine dehydrogenase (XDH) expression, or any of the above Combinations, and pharmaceutical combinations for the treatment of hyperuricemia, gout, non-alcoholic fatty liver disease (NAFLD), non-alcoholic steatohepatitis (NASH), metabolic disorders, insulin resistance, cardiovascular disease, type 2 A therapeutic agent for diabetes, Lesch Nyhan syndrome, glycogen storage disease (GSD), and diseases related to oxidative stress or other XDH-related diseases. Non-limiting examples of behavior modification are: dietary programs, counseling, and exercise programs. These and other therapeutic agents and behavior modification agents are known in the art and may be used to treat xanthine dehydrogenase (XDH) diseases or conditions in a subject and may also be combined with one or more xanthine dehydrogenase enzymes of the invention (XDH) dsRNA agent combinations for administration to a subject to treat xanthine dehydrogenase (XDH) diseases or conditions. The xanthine dehydrogenase (XDH) dsRNA agents of the invention that are administered to cells or subjects to treat xanthine dehydrogenase (XDH)-related diseases or conditions can act in a synergistic manner with one or more other therapeutic agents or active ingredients. act, thereby increasing the effectiveness of one or more therapeutic agents or active ingredients and/or increasing the effectiveness of xanthine dehydrogenase (XDH) dsRNA agents in treating xanthine dehydrogenase (XDH)-related diseases or conditions.
本發明的治療方法包括施用黃嘌呤脫氫酶(XDH) dsRNA試劑,可在黃嘌呤脫氫酶(XDH) 相關疾病或病症發作之前和/或當存在黃嘌呤脫氫酶(XDH)相關疾病或病症時使用,包括在疾病或病症的早期、中期、晚期階段以及任何這些階段之前和之後的所有時間使用。本發明的方法還可以治療先前已經接受過一種或更多種其他治療劑和/或治療活性成分的黃嘌呤脫氫酶(XDH)相關疾病或病症治療的對象,其中一種或更多種其他治療劑和/或治療活性成分在治療對象的黃嘌呤脫氫酶(XDH)相關疾病或病症方面不成功、成功性最小和/或不再成功。 載體編碼的 dsRNA The treatment methods of the present invention include the administration of a xanthine dehydrogenase (XDH) dsRNA agent, which may precede the onset of a xanthine dehydrogenase (XDH)-related disease or condition and/or when a xanthine dehydrogenase (XDH)-related disease or condition is present or Use during the early, middle, late stages of a disease or condition, and at all times before and after any of these stages. The methods of the present invention may also treat subjects who have been previously treated for xanthine dehydrogenase (XDH)-related diseases or conditions with one or more other therapeutic agents and/or therapeutic active ingredients, wherein one or more other therapeutic agents The agent and/or therapeutically active ingredient is unsuccessful, minimally successful, and/or no longer successful in treating the subject's xanthine dehydrogenase (XDH)-related disease or condition. vector-encoded dsRNA
在本發明的某些實施方案中,可以使用載體將黃嘌呤脫氫酶(XDH) dsRNA試劑遞送到細胞中。黃嘌呤脫氫酶(XDH) dsRNA 試劑轉錄單位可包含在DNA或RNA載體中。用於將序列遞送到細胞和/或對象中的此類編碼轉基因的載體的製備和使用是本領域公知的。可在本發明的方法中使用導致黃嘌呤脫氫酶(XDH) dsRNA瞬時表達的載體,瞬時表達例如至少1、2、3、4、5、6、7、8、9、10小時或更多小時、1、2、3、4、5、6、7、8、9、10 周或更多周。瞬時表達的長度可以使用基於以下要素的常規方法確定:例如但不限於所選的特定載體構建體和靶細胞和/或組織。此類轉基因可作為線性構建體、環狀質粒或病毒載體引入,其可為整合或非整合載體。也可以構建轉基因以使其作為染色體外質粒遺傳(Gassmann, et al., Proc. Natl. Acad. Sci. USA (1995) 92:1292)。In certain embodiments of the invention, a carrier can be used to deliver the xanthine dehydrogenase (XDH) dsRNA agent into the cell. The xanthine dehydrogenase (XDH) dsRNA reagent transcription unit can be contained in a DNA or RNA vector. The preparation and use of such transgene-encoding vectors for delivering sequences into cells and/or subjects is well known in the art. Vectors that result in transient expression of xanthine dehydrogenase (XDH) dsRNA, for example, for at least 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 hours or more can be used in the methods of the invention. hours, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 or more weeks. The length of transient expression can be determined using conventional methods based on factors such as, but not limited to, the specific vector construct selected and the target cells and/or tissues. Such transgenes can be introduced as linear constructs, circular plasmids or viral vectors, which can be integrating or non-integrating vectors. Transgenes can also be constructed so that they are inherited as extrachromosomal plasmids (Gassmann, et al., Proc. Natl. Acad. Sci. USA (1995) 92:1292).
黃嘌呤脫氫酶(XDH) dsRNA試劑的一條或更多條單鏈可以從表達載體上的啓動子轉錄。在要表達兩條單獨的鏈以產生例如dsRNA的情况下,可以使用例如轉染或感染的方式將兩個單獨的表達載體共同引入細胞。在某些實施方案中,本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑的每條單獨鏈都可以被包含在同一表達載體上的啓動子轉錄。在本發明的某些實施方案中,黃嘌呤脫氫酶(XDH) dsRNA試劑被表達為通過接頭多核苷酸序列連接的反向重複多核苷酸,使得黃嘌呤脫氫酶(XDH) dsRNA試劑具有莖環結構。One or more single strands of the xanthine dehydrogenase (XDH) dsRNA reagent can be transcribed from a promoter on an expression vector. Where two separate strands are to be expressed to produce, for example, dsRNA, the two separate expression vectors can be co-introduced into the cell using, for example, transfection or infection. In certain embodiments, each individual strand of the xanthine dehydrogenase (XDH) dsRNA agent of the invention can be transcribed from a promoter contained on the same expression vector. In certain embodiments of the invention, the xanthine dehydrogenase (XDH) dsRNA agent is expressed as an inverted repeat polynucleotide linked by a linker polynucleotide sequence such that the xanthine dehydrogenase (XDH) dsRNA agent has Stem-loop structure.
RNA表達載體的非限制性實例是DNA質粒或病毒載體。在本發明的實施方案中有用的表達載體可以與真核細胞相容。真核細胞表達載體在本領域是常規使用的,並且可從許多商業來源獲得。黃嘌呤脫氫酶(XDH) dsRNA 表達載體的遞送可以是全身性的,例如通過靜脈內或肌肉內給藥、通過給藥至從對象移出的靶細胞然後將靶細胞重新引入對象,或通過允許引入所需靶細胞的任何其他方式來進行。Non-limiting examples of RNA expression vectors are DNA plasmids or viral vectors. Expression vectors useful in embodiments of the invention may be compatible with eukaryotic cells. Eukaryotic expression vectors are routinely used in the art and are available from many commercial sources. Delivery of the xanthine dehydrogenase (XDH) dsRNA expression vector can be systemic, such as by intravenous or intramuscular administration, by administration to target cells removed from the subject and then reintroduced to the subject, or by allowing Any other means of introducing the desired target cells is performed.
可包括在該方法的實施方案中的病毒載體系統包括但不限於:(a)腺病毒載體;(b) 逆轉錄病毒載體,包括但不限於慢病毒載體、莫洛尼鼠白血病病毒等;(c) 腺相關病毒載體;(d) 單純疱疹病毒載體;(e) SV 40 載體;(f) 多瘤病毒載體;(g) 乳頭狀瘤病毒載體;(h) 小核糖核酸病毒載體;(i) 痘病毒載體,例如正痘病毒載體,例如痘苗病毒載體或禽痘病毒載體,例如金絲雀痘或家禽痘病毒載體;(j) 輔助依賴型或無腸腺病毒載體。用於重組表達黃嘌呤脫氫酶(XDH) dsRNA試劑的構建體可以包含調節元件,例如啓動子、增强子等,它們可以被選擇以提供組成型或調節型/誘導型表達。病毒載體系統以及啓動子和增强子的使用等在本領域是常規的並且可以與本文所述的方法和組合物結合使用。Viral vector systems that may be included in embodiments of the method include, but are not limited to: (a) adenoviral vectors; (b) retroviral vectors, including but not limited to lentiviral vectors, Moloney murine leukemia virus, and the like; ( c) Adeno-associated virus vector; (d) Herpes simplex virus vector; (e) SV 40 vector; (f) Polyomavirus vector; (g) Papillomavirus vector; (h) Picornavirus vector; (i) ) poxvirus vectors, such as orthopoxvirus vectors, such as vaccinia virus vectors or fowlpox virus vectors, such as canarypox or fowlpox virus vectors; (j) helper-dependent or gutless adenovirus vectors. Constructs for recombinant expression of xanthine dehydrogenase (XDH) dsRNA reagents can contain regulatory elements such as promoters, enhancers, etc., which can be selected to provide constitutive or regulated/inducible expression. Viral vector systems and the use of promoters and enhancers, etc. are routine in the art and can be used in conjunction with the methods and compositions described herein.
本發明的某些實施方案包括使用病毒載體將黃嘌呤脫氫酶(XDH) dsRNA試劑遞送到細胞中。許多基於腺病毒的遞送系統在本領域中常規用於遞送至例如肺、肝、中樞神經系統、內皮細胞和肌肉。可用於本發明方法的病毒載體的非限制性實例是:AAV載體、痘病毒如痘苗病毒、改良安卡拉病毒(MVA)、NYVAC、禽痘如禽痘或金絲雀痘病毒。Certain embodiments of the invention include the use of viral vectors to deliver xanthine dehydrogenase (XDH) dsRNA agents into cells. A number of adenovirus-based delivery systems are routinely used in the art for delivery to, for example, the lungs, liver, central nervous system, endothelial cells, and muscle. Non-limiting examples of viral vectors that may be used in the methods of the invention are: AAV vectors, poxviruses such as vaccinia virus, modified Ankara virus (MVA), NYVAC, fowlpox such as fowlpox or canarypox virus.
本發明的某些實施方案包括使用載體將黃嘌呤脫氫酶(XDH) dsRNA試劑遞送到細胞中的方法,並且此類載體可以在藥學上可接受的載體中,所述載體可以但不必包括其中嵌入基因遞送載體的緩釋基質。在一些實施方案中,用於遞送黃嘌呤脫氫酶(XDH) dsRNA的載體可以由重組細胞產生,並且本發明的藥物組合物可以包括一種或更多種產生黃嘌呤脫氫酶(XDH) dsRNA遞送系統的細胞。 含有黃嘌呤脫氫酶( XDH ) dsRNA 或 ssRNA 試劑的藥物組合物 Certain embodiments of the present invention include methods of delivering a xanthine dehydrogenase (XDH) dsRNA agent into a cell using a carrier, and such carrier may be in a pharmaceutically acceptable carrier, which may, but need not include, A sustained-release matrix embedded in a gene delivery vector. In some embodiments, vectors for delivering xanthine dehydrogenase (XDH) dsRNA can be produced by recombinant cells, and pharmaceutical compositions of the invention can include one or more xanthine dehydrogenase (XDH) dsRNA-producing delivery system to cells. Pharmaceutical compositions containing xanthine dehydrogenase ( XDH ) dsRNA or ssRNA reagents
本發明的某些實施方案包括含有黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑和藥學上可接受的載體的藥物組合物的用途。包含黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑的藥物組合物可用於本發明的方法中以降低細胞中的黃嘌呤脫氫酶(XDH)基因表達和黃嘌呤脫氫酶(XDH)活性,並可用於治療黃嘌呤脫氫酶(XDH)相關疾病或病症。此類藥物組合物可以基於遞送方式來配製。用於遞送方式的製劑的非限制性實例是:配製用於皮下遞送的組合物、配製用於通過腸胃外遞送全身給藥的組合物、配製用於靜脈內(IV)遞送的組合物、配製用於鞘內遞送的組合物、配製用於直接遞送至腦中的組合物等。可以使用一種或更多種方式施用本發明的藥物組合物以將黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑遞送到細胞中,例如:表面(例如,通過透皮貼劑);肺部,例如通過吸入或吹入粉末或氣霧劑,包括通過霧化器;氣道內、鼻內、表皮和透皮、口服或腸胃外。腸胃外給藥包括靜脈內、動脈內、皮下、腹膜內或肌肉內注射或輸注;表皮下,例如通過植入裝置;或顱內,例如通過實質內;鞘內或心室內施用。黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑也可以直接遞送至靶組織,例如直接遞送至肝臟等。可以理解的是,“遞送黃嘌呤脫氫酶(XDH) dsRNA試劑”或“遞送黃嘌呤脫氫酶(XDH)反義多核苷酸試劑”到細胞中分別包括遞送黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑、直接在細胞中表達黃嘌呤脫氫酶(XDH) dsRNA試劑以及從遞送到細胞中的編碼載體表達黃嘌呤脫氫酶(XDH) dsRNA試劑,或使得黃嘌呤脫氫酶(XDH) dsRNA或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑出現在細胞中的任何合適的方式。製劑的製備和使用以及用於遞送抑制性RNA的手段是本領域公知的和常規使用的。Certain embodiments of the invention include the use of pharmaceutical compositions containing a xanthine dehydrogenase (XDH) dsRNA agent or a xanthine dehydrogenase (XDH) antisense polynucleotide agent and a pharmaceutically acceptable carrier. Pharmaceutical compositions containing xanthine dehydrogenase (XDH) dsRNA agents or xanthine dehydrogenase (XDH) antisense polynucleotide agents can be used in the methods of the invention to reduce xanthine dehydrogenase (XDH) in cells Gene expression and xanthine dehydrogenase (XDH) activity, and can be used to treat xanthine dehydrogenase (XDH)-related diseases or conditions. Such pharmaceutical compositions can be formulated based on the mode of delivery. Non-limiting examples of formulations for delivery modes are: compositions formulated for subcutaneous delivery, compositions formulated for systemic administration by parenteral delivery, compositions formulated for intravenous (IV) delivery, compositions formulated for Compositions for intrathecal delivery, compositions formulated for direct delivery into the brain, and the like. The pharmaceutical compositions of the present invention may be administered using one or more means to deliver the xanthine dehydrogenase (XDH) dsRNA agent or the xanthine dehydrogenase (XDH) antisense polynucleotide agent into the cell, for example: the surface (e.g., via a transdermal patch); pulmonary, e.g., by inhalation or insufflation of a powder or aerosol, including via a nebulizer; intraairway, intranasal, epidermal and transdermal, oral, or parenteral. Parenteral administration includes intravenous, intraarterial, subcutaneous, intraperitoneal or intramuscular injection or infusion; subcutaneous, for example by an implanted device; or intracranial, for example by intraparenchymal; intrathecal or intraventricular administration. Xanthine dehydrogenase (XDH) dsRNA agents or xanthine dehydrogenase (XDH) antisense polynucleotide agents can also be delivered directly to target tissues, such as directly to the liver and the like. It will be understood that "delivering a xanthine dehydrogenase (XDH) dsRNA reagent" or "delivering a xanthine dehydrogenase (XDH) antisense polynucleotide reagent" into a cell respectively includes delivering xanthine dehydrogenase (XDH) dsRNA reagents or xanthine dehydrogenase (XDH) antisense polynucleotide agents, expression of xanthine dehydrogenase (XDH) dsRNA reagents directly in cells, and expression of xanthine dehydrogenase (XDH) from encoding vectors delivered into cells ) dsRNA reagent, or any suitable manner of causing the xanthine dehydrogenase (XDH) dsRNA or xanthine dehydrogenase (XDH) antisense polynucleotide reagent to appear in the cell. The preparation and use of formulations and means for delivering inhibitory RNA are well known and routinely used in the art.
如本文所用,“藥物組合物”包含藥理學有效量的本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑和藥學上可接受的載體。術語“藥學上可接受的載體”是指用於施用治療劑的載體。此類載體包括但不限於鹽水、緩衝鹽水、葡萄糖、水、甘油、乙醇及其組合。該術語明確排除細胞培養基。對於口服給藥的藥物,藥學上可接受的載體包括但不限於藥學上可接受的賦形劑,例如惰性稀釋劑、崩解劑、黏合劑、潤滑劑、甜味劑、調味劑、著色劑和防腐劑。合適的惰性稀釋劑包括碳酸鈉和碳酸鈣、磷酸鈉和磷酸鈣以及乳糖,而玉米澱粉和藻酸是合適的崩解劑。黏合劑可包括澱粉和明膠,而潤滑劑(如果存在)通常是硬脂酸鎂、硬脂酸或滑石粉。如果需要,片劑可以用例如單硬脂酸甘油酯或二硬脂酸甘油酯之類的材料包衣,以延遲在胃腸道中的吸收。包含在藥物製劑中的試劑在下文進一步描述。如本文所用的術語,例如“藥理學有效量”、“治療有效量”和“有效量”,是指本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑產生預期的藥理學、治療或預防結果的量。例如,如果與疾病或障礙相關的可測量參數至少降低 10% 時,則認為給定的臨床治療有效,那麽用於治療該疾病或病症的藥物的治療有效量是使該參數降低至少10%所需的量。例如,治療有效量的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑可以將黃嘌呤脫氫酶(XDH)多肽水平降低至少10%。藥物組合物可以包含這樣的dsRNAi試劑,其包括例如表1中所顯示的雙鏈體AV00206至AV00174。優選的dsRNAi試劑包括例如雙鏈體AV00227、AV00260、AV00285、AV00266、AV00280、AV00238、AV00249、AV00289、AV00233、AV00225、AV00273或AV00283。在某些實施方案中,優選表2中dsRNAi試劑包括例如雙鏈體AV00227、AV00260、AV00285、AV00266或AV00280。在某些實施方案中,優選的表3中dsRNAi試劑包括例如雙鏈體AD00353、AD00356、AD00358、AD00364、AD00365、AD00366、AD00368、AD00370、AD00430、AD00431、AD00432、AD00521、AD00521-1、AD00364-1、AD00365-2、AD00366-1和AD00432-1。 有效量 As used herein, a "pharmaceutical composition" includes a pharmacologically effective amount of a xanthine dehydrogenase (XDH) dsRNA agent or a xanthine dehydrogenase (XDH) antisense polynucleotide agent of the invention and a pharmaceutically acceptable carrier . The term "pharmaceutically acceptable carrier" refers to a carrier used to administer a therapeutic agent. Such carriers include, but are not limited to, saline, buffered saline, glucose, water, glycerol, ethanol, and combinations thereof. This term specifically excludes cell culture media. For drugs administered orally, pharmaceutically acceptable carriers include, but are not limited to, pharmaceutically acceptable excipients, such as inert diluents, disintegrating agents, binders, lubricants, sweeteners, flavoring agents, and coloring agents. and preservatives. Suitable inert diluents include sodium and calcium carbonate, sodium and calcium phosphate and lactose, while cornstarch and alginic acid are suitable disintegrants. Binders may include starches and gelatin, while lubricants, if present, are usually magnesium stearate, stearic acid, or talc. If desired, the tablets may be coated with a material such as glyceryl monostearate or glyceryl distearate to delay absorption in the gastrointestinal tract. Agents included in the pharmaceutical formulations are described further below. As used herein, terms such as "pharmacologically effective amount,""therapeutically effective amount," and "effective amount" refer to the xanthine dehydrogenase (XDH) dsRNA reagent or xanthine dehydrogenase (XDH) reagent of the invention. An amount of a polynucleotide agent that produces the desired pharmacological, therapeutic or prophylactic result. For example, a given clinical treatment is considered effective if it reduces a measurable parameter associated with the disease or disorder by at least 10%, then a therapeutically effective amount of a drug used to treat that disease or disorder is the amount that reduces that parameter by at least 10%. required amount. For example, a therapeutically effective amount of a xanthine dehydrogenase (XDH) dsRNA agent or a xanthine dehydrogenase (XDH) antisense polynucleotide agent can reduce xanthine dehydrogenase (XDH) polypeptide levels by at least 10%. Pharmaceutical compositions may comprise dsRNAi agents including, for example, duplexes AV00206 to AV00174 shown in Table 1. Preferred dsRNAi agents include, for example, duplexes AV00227, AV00260, AV00285, AV00266, AV00280, AV00238, AV00249, AV00289, AV00233, AV00225, AV00273, or AV00283. In certain embodiments, preferred dsRNAi agents of Table 2 include, for example, duplexes AV00227, AV00260, AV00285, AV00266, or AV00280. In certain embodiments, preferred dsRNAi agents of Table 3 include, for example, duplexes AD00353, AD00356, AD00358, AD00364, AD00365, AD00366, AD00368, AD00370, AD00430, AD00431, AD00432, AD00521, AD00521-1, AD00364-1 , AD00365-2, AD00366-1 and AD00432-1. effective amount
在一些方面,本發明的方法包括將細胞與有效量的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑接觸以減少所接觸細胞中的黃嘌呤脫氫酶(XDH)基因表達。本發明方法的某些實施方案包括以有效降低黃嘌呤脫氫酶(XDH)基因表達和治療對象的黃嘌呤脫氫酶(XDH)相關疾病或病症的量向對象施用黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑。就減少黃嘌呤脫氫酶(XDH)的表達和/或用於治療黃嘌呤脫氫酶(XDH)相關疾病或病症而言,所使用的“有效量”是實現所需生物學效果所必需或足夠的量。例如,治療黃嘌呤脫氫酶(XDH)相關疾病或病症的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑的有效量可以是:(i) 減緩或停止疾病或病症的進展所需的量;(ii) 逆轉、減少或消除疾病或病症的一種或更多種症狀。在本發明的一些方面,有效量是當施用於需要治療黃嘌呤脫氫酶(XDH)相關疾病或病症的對象時,導致疾病或病症的預防和/或治療的治療響應的黃嘌呤脫氫酶(XDH dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑的量。根據本發明的一些方面,有效量是本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑當與針對黃嘌呤脫氫酶(XDH)相關疾病或病症的另一種治療性治療組合或共同施用時,導致預防和/或治療該疾病或病症的治療響應的量。在本發明的一些實施方案中,用本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑治療對象的生物學效應可以是由黃嘌呤脫氫酶(XDH)相關疾病或病症引起的症狀的改善和/或完全消除。在本發明的一些實施方案中,生物學效應是黃嘌呤脫氫酶(XDH)相關疾病或病症的完全消除,例如通過指示對象沒有黃嘌呤脫氫酶(XDH)相關疾病或病症的診斷測試來證明。可檢測的生理症狀的非限制性實例包括在施用本發明的試劑後對象臨床上血液或尿液中尿酸水平的降低。其他評估黃嘌呤脫氫酶(XDH)相關疾病或病症狀態的本領域已知方式可用於確定本發明的試劑和/或方法對黃嘌呤脫氫酶(XDH)相關疾病或病症的影響。In some aspects, methods of the invention include contacting a cell with an effective amount of a xanthine dehydrogenase (XDH) dsRNA agent or a xanthine dehydrogenase (XDH) antisense polynucleotide agent to reduce xanthine in the contacted cell Dehydrogenase (XDH) gene expression. Certain embodiments of the methods of the present invention include administering xanthine dehydrogenase (XDH) to a subject in an amount effective to reduce xanthine dehydrogenase (XDH) gene expression and treat a xanthine dehydrogenase (XDH)-related disease or disorder in the subject ) dsRNA reagent or xanthine dehydrogenase (XDH) antisense polynucleotide reagent. With respect to reducing the expression of xanthine dehydrogenase (XDH) and/or for treating xanthine dehydrogenase (XDH)-related diseases or conditions, an "effective amount" used is that which is necessary to achieve the desired biological effect or Sufficient amount. For example, an effective amount of a xanthine dehydrogenase (XDH) dsRNA agent or a xanthine dehydrogenase (XDH) antisense polynucleotide agent that treats a xanthine dehydrogenase (XDH)-related disease or disorder can be: (i) An amount required to slow or stop the progression of a disease or condition; (ii) reverse, reduce or eliminate one or more symptoms of a disease or condition. In some aspects of the invention, an effective amount is xanthine dehydrogenase (XDH) that, when administered to a subject in need of treatment of a xanthine dehydrogenase (XDH)-related disease or condition, results in a therapeutic response in the prevention and/or treatment of the disease or condition. (XDH dsRNA reagent or xanthine dehydrogenase (XDH) antisense polynucleotide agent. According to some aspects of the invention, an effective amount is the xanthine dehydrogenase (XDH) dsRNA reagent or Enzyme (XDH) antisense polynucleotide agents, when combined or co-administered with another therapeutic treatment for a disease or condition associated with xanthine dehydrogenase (XDH), result in a therapeutic response that prevents and/or treats the disease or condition The amount. In some embodiments of the invention, the biological effect of treating a subject with the xanthine dehydrogenase (XDH) dsRNA agent or xanthine dehydrogenase (XDH) antisense polynucleotide agent of the invention can be Improvement and/or complete elimination of symptoms caused by xanthine dehydrogenase (XDH)-related diseases or conditions. In some embodiments of the invention, the biological effect is complete elimination of xanthine dehydrogenase (XDH)-related diseases or conditions. Elimination, for example, as demonstrated by a diagnostic test indicating that the subject does not have a xanthine dehydrogenase (XDH)-related disease or condition. Non-limiting examples of detectable physiological symptoms include clinical symptoms in the subject's blood or urine after administration of an agent of the invention Reduction in uric acid levels. Other art-known means of assessing xanthine dehydrogenase (XDH)-related diseases or condition states may be used to determine the effect of the reagents and/or methods of the present invention on xanthine dehydrogenase (XDH)-related diseases or conditions. The impact of disease.
通常在臨床試驗中確定將黃嘌呤脫氫酶(XDH)多肽活性降低至治療黃嘌呤脫氫酶(XDH)相關疾病或病症的水平的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑的有效量,這樣的臨床試驗在盲法研究中為測試人群與對照人群建立有效劑量。在一些實施方案中,有效量是導致所需響應的量,例如減少細胞、組織和/或患有疾病或病症的對象中的黃嘌呤脫氫酶(XDH)相關疾病或病症的量。因此,用於治療可通過降低黃嘌呤脫氫酶(XDH)多肽活性治療的黃嘌呤脫氫酶(XDH)相關疾病或病症的黃嘌呤脫氫酶(XDH)dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑的有效量可以是這樣的量:當施用時,將對象中黃嘌呤脫氫酶(XDH)多肽活性的量降低至低於在未施用黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑的情况下將存在於細胞、組織和/或對象中的量。在本發明的某些方面,存在於未接觸或施用過本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑的細胞、組織和/或對象中的黃嘌呤脫氫酶(XDH)多肽活性和/或黃嘌呤脫氫酶(XDH)基因表達的水平被稱為“對照”量。在本發明方法的一些實施方案中,對象的對照量是對象的治療前量;換言之,對象在施用黃嘌呤脫氫酶(XDH)試劑之前的水平可以是該對象的對照水平,並且用於與其在向對象施用siRNA後的黃嘌呤脫氫酶(XDH)多肽活性和/或黃嘌呤脫氫酶(XDH)基因表達水平相比較。在治療黃嘌呤脫氫酶(XDH)相關疾病或病症的情况下,期望的響應可以是減少或消除細胞、組織和/或對象中疾病或病症的一種或更多種症狀。減少或消除可以是暫時的,也可以是永久性的。應當理解,可以使用確定黃嘌呤脫氫酶(XDH)多肽活性、黃嘌呤脫氫酶(XDH)基因表達、症狀評估、臨床測試等的方法來監測黃嘌呤脫氫酶(XDH)相關疾病或病症的狀態。在本發明的一些方面,對治療黃嘌呤脫氫酶(XDH)相關疾病或病症的期望響應是延遲疾病或病症的發作或甚至預防疾病或病症的發作。Xanthine Dehydrogenase (XDH) dsRNA agents or enzyme (XDH) antisense polynucleotide reagent, such clinical trials establish effective doses for test and control populations in a blinded study. In some embodiments, an effective amount is an amount that results in a desired response, such as a reduction in xanthine dehydrogenase (XDH)-related disease or disorder in cells, tissues, and/or subjects suffering from the disease or disorder. Accordingly, xanthine dehydrogenase (XDH) dsRNA reagents or xanthine dehydrogenase ( An effective amount of an antisense polynucleotide agent for ) the amount of dsRNA agent or xanthine dehydrogenase (XDH) antisense polynucleotide agent that will be present in the cell, tissue and/or subject. In certain aspects of the invention, cells, tissues and/or cells that have not been exposed to or administered the xanthine dehydrogenase (XDH) dsRNA agent or xanthine dehydrogenase (XDH) antisense polynucleotide agent of the invention The level of xanthine dehydrogenase (XDH) polypeptide activity and/or xanthine dehydrogenase (XDH) gene expression in a subject is referred to as the "control" amount. In some embodiments of the methods of the invention, the subject's control amount is the subject's pre-treatment amount; in other words, the subject's level prior to administration of the xanthine dehydrogenase (XDH) agent can be the subject's control level and used to compare it to Comparison of xanthine dehydrogenase (XDH) polypeptide activity and/or xanthine dehydrogenase (XDH) gene expression levels following administration of siRNA to a subject. In the case of treating a xanthine dehydrogenase (XDH)-related disease or disorder, the desired response may be to reduce or eliminate one or more symptoms of the disease or disorder in cells, tissues, and/or subjects. Reduction or elimination can be temporary or permanent. It is understood that xanthine dehydrogenase (XDH)-related diseases or conditions may be monitored using methods for determining xanthine dehydrogenase (XDH) polypeptide activity, xanthine dehydrogenase (XDH) gene expression, symptom assessment, clinical testing, etc. status. In some aspects of the invention, a desired response to treating a xanthine dehydrogenase (XDH)-related disease or condition is to delay the onset of the disease or condition or even prevent the onset of the disease or condition.
降低黃嘌呤脫氫酶(XDH)多肽活性的化合物的有效量也可以通過以下方式確定:評估施用黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑對細胞或對象的生理作用,例如施用後黃嘌呤脫氫酶(XDH)相關疾病或病症的減少。對象的測定和/或症狀監測可用於確定本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑的功效(其可以在本發明的藥物化合物中給藥),並確定對治療是否有響應。另一個非限制性示例是:在用本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑治療對象之前和之後,可以使用一種或更多種本領域已知的血清尿酸水平測試來確定對象的黃嘌呤脫氫酶(XDH)相關疾病或病症的狀態。在另一個非限制性實例中,使用一種或更多種本領域已知的尿酸水平測試來確定對象中黃嘌呤脫氫酶(XDH)相關疾病的狀態。在該實施例中,疾病包括高尿酸血症、痛風、非酒精性脂肪肝疾病(NAFLD) 、非酒精性脂肪性肝炎(NASH) 、代謝紊亂、胰島素抵抗、心血管疾病、2型糖尿病、Lesch Nyhan症候群,肝醣儲積症(GSD),以及與氧化應激有關的疾病或其他XDH相關疾病,並且該測試用於確定在用本發明的黃嘌呤脫氫酶(XDH)dsRNA試劑治療對象之前和之後對象中的尿酸水平。The effective amount of a compound that reduces the activity of a xanthine dehydrogenase (XDH) polypeptide can also be determined by evaluating the administration of a xanthine dehydrogenase (XDH) dsRNA reagent or a xanthine dehydrogenase (XDH) antisense polynucleotide reagent. A physiological effect on a cell or subject, such as a reduction in a xanthine dehydrogenase (XDH)-related disease or condition following administration. Subject assays and/or symptom monitoring may be used to determine the efficacy of the xanthine dehydrogenase (XDH) dsRNA agents or xanthine dehydrogenase (XDH) antisense polynucleotide agents of the invention (which may be used in the pharmaceutical compounds of the invention administration) and determine whether there is a response to treatment. Another non-limiting example is that before and after treating a subject with a xanthine dehydrogenase (XDH) dsRNA agent of the invention, one or more serum uric acid level tests known in the art can be used to determine the subject's xanthine level. The status of a purine dehydrogenase (XDH) related disease or condition. In another non-limiting example, one or more uric acid level tests known in the art are used to determine the status of a xanthine dehydrogenase (XDH)-related disease in a subject. In this example, diseases include hyperuricemia, gout, non-alcoholic fatty liver disease (NAFLD), non-alcoholic steatohepatitis (NASH), metabolic disorders, insulin resistance, cardiovascular disease, type 2 diabetes, Lesch Nyhan syndrome, glycogen storage disease (GSD), and diseases related to oxidative stress or other XDH-related diseases, and this test is used to determine whether a subject is treated with the xanthine dehydrogenase (XDH) dsRNA agent of the invention and uric acid levels in the subjects afterwards.
本發明的一些實施方案包括確定向對象施用的本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑來治療黃嘌呤脫氫酶(XDH)相關疾病或病症之功效的方法,其通過評估和/或監測對象中黃嘌呤脫氫酶(XDH)相關疾病或病症的一種或更多種“生理特徵”來進行。黃嘌呤脫氫酶(XDH)相關疾病或病症的生理特徵的非限制性實例是許多患者還會出現血液和尿液中尿酸水平升高,疼痛的增加(例如由痛風引起的疼痛),炎症風險增加事件。確定這種生理特徵的標準方法是本領域已知的,包括但不限於血液測試、成像研究、身體檢查等,該綜合征的定義是存在血液和尿液中尿酸水平的降低,疼痛的減輕(例如由痛風引起的疼痛),炎症的減少。Some embodiments of the invention include determining the administration of a xanthine dehydrogenase (XDH) dsRNA agent or xanthine dehydrogenase (XDH) antisense polynucleotide agent of the invention to a subject to treat xanthine dehydrogenase (XDH) Methods of treating diseases or conditions by assessing and/or monitoring one or more "physiological characteristics" of a xanthine dehydrogenase (XDH)-related disease or condition in a subject. Non-limiting examples of physiological features of xanthine dehydrogenase (XDH)-related diseases or conditions are that many patients also experience elevated levels of uric acid in the blood and urine, increased pain (such as that caused by gout), risk of inflammation Add events. Standard methods for determining this physiological profile are known in the art and include, but are not limited to, blood tests, imaging studies, physical examinations, etc. The syndrome is defined by the presence of decreased uric acid levels in the blood and urine, decreased pain ( such as pain caused by gout), reduction of inflammation.
可以理解的是,可以至少部分地基於這種對對象確定的疾病和/或病症狀態和/或生理特徵的測定結果來修改向對象施用的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑的量。治療量可以通過例如以下方式改變:通過改變施用黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑的組合物、通過改變給藥途徑、通過改變給藥時間等,來增加或減少黃嘌呤脫氫酶(XDH)dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑的量。黃嘌呤脫氫酶(XDH)dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑的有效量將隨著所治療的特定病症、所治療對象的年齡和身體狀况、病情的嚴重程度、治療的持續時間、共同治療的性質(如果有的話)、具體的給藥途徑以及健康從業者知識和專業知識範圍內的其他因素而變化。例如,有效量可取决於對治療黃嘌呤脫氫酶(XDH)相關疾病或病症有效的黃嘌呤脫氫酶(XDH)多肽活性和/或黃嘌呤脫氫酶(XDH)基因表達的所需水平。技術人員可以憑經驗確定用於本發明方法的特定黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑的有效量,而無需過度實驗。結合本文提供的教導,通過從本發明的多種黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑中進行選擇,並權衡例如效力、相對生物利用度、患者體重、不良副作用的嚴重程度和優選的給藥方式等因素,可以規劃有效的預防性或治療性治療方案以有效治療特定對象。如在本發明的實施方案中使用的,本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑的有效量可以是當與細胞接觸時在細胞中產生所需生物學效應的量。It will be appreciated that the xanthine dehydrogenase (XDH) dsRNA agent or xanthine dehydrogenase agent administered to the subject may be modified based at least in part on the results of such determination of the subject's determined disease and/or disorder state and/or physiological characteristics. Amount of hydrogenase (XDH) antisense polynucleotide agent. The therapeutic amount may be varied, for example, by varying the composition of the xanthine dehydrogenase (XDH) dsRNA agent or xanthine dehydrogenase (XDH) antisense polynucleotide agent administered, by varying the route of administration, by varying the Increase or decrease the amount of xanthine dehydrogenase (XDH) dsRNA reagent or xanthine dehydrogenase (XDH) antisense polynucleotide reagent according to the medication time, etc. The effective amount of the xanthine dehydrogenase (XDH) dsRNA agent or the xanthine dehydrogenase (XDH) antisense polynucleotide agent will vary depending on the specific condition being treated, the age and physical condition of the subject being treated, and the severity of the condition. Varies with the extent, duration of treatment, the nature of co-treatments (if any), the specific route of administration, and other factors within the health practitioner's knowledge and expertise. For example, the effective amount may depend on the desired level of xanthine dehydrogenase (XDH) polypeptide activity and/or xanthine dehydrogenase (XDH) gene expression effective in treating xanthine dehydrogenase (XDH)-related diseases or conditions. . The skilled artisan can empirically determine the effective amount of a particular xanthine dehydrogenase (XDH) dsRNA reagent or xanthine dehydrogenase (XDH) antisense polynucleotide reagent for use in the methods of the invention without undue experimentation. In conjunction with the teachings provided herein, by selecting from a variety of xanthine dehydrogenase (XDH) dsRNA reagents or xanthine dehydrogenase (XDH) antisense polynucleotide reagents of the invention and weighing, for example, potency, relative bioavailability , patient weight, severity of adverse side effects, and preferred mode of administration, an effective preventive or therapeutic treatment regimen can be planned to effectively treat a specific subject. As used in embodiments of the invention, an effective amount of the xanthine dehydrogenase (XDH) dsRNA agent or xanthine dehydrogenase (XDH) antisense polynucleotide agent of the invention can be The amount in cells that produces the desired biological effect.
應當認識到,黃嘌呤脫氫酶(XDH)基因沉默可以在表達黃嘌呤脫氫酶(XDH)的任何細胞中通過組成型或通過基因組工程進行,並通過任何合適的測定來確定。在本發明的一些實施方案中,通過施用本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑,黃嘌呤脫氫酶(XDH)基因表達降低至少5%、6%、7%、8%、9%、10%、15%、20%、25%、30%、35%、40%、45%、50%、55%、60%、65%、70%、75%、80%、85%、90%、95%或100%。在本發明的一些實施方案中,通過施用本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑,黃嘌呤脫氫酶(XDH)基因表達減少5%至10%、5%至25%、10%至50%、10%至75%、25%至75%、25%至100%或50%至100%。 給藥 It should be appreciated that xanthine dehydrogenase (XDH) gene silencing can be performed constitutively or by genome engineering in any cell expressing xanthine dehydrogenase (XDH) and determined by any suitable assay. In some embodiments of the invention, by administering the xanthine dehydrogenase (XDH) dsRNA agent of the invention, xanthine dehydrogenase (XDH) gene expression is reduced by at least 5%, 6%, 7%, 8%, 9 %, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 95% or 100%. In some embodiments of the invention, by administering the xanthine dehydrogenase (XDH) dsRNA reagent of the invention, xanthine dehydrogenase (XDH) gene expression is reduced by 5% to 10%, 5% to 25%, 10% to 50%, 10% to 75%, 25% to 75%, 25% to 100% or 50% to 100%. Give medication
黃嘌呤脫氫酶(XDH) dsRNA試劑和黃嘌呤脫氫酶(XDH)反義多核苷酸試劑以足以抑制黃嘌呤脫氫酶(XDH)基因表達的劑量在藥物組合物中遞送。在本發明的某些實施方案中,黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑的劑量為每千克接受者體重每天0.01至200.0毫克,一般為每天1至50mg/kg體重、5至40mg/kg體重、10至30mg/kg體重、1至20mg/kg體重、1至10mg/kg體重、4至15mg/kg體重,包括端值。例如,黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑的每單次給藥可以以從約0.01 mg/kg、0.05 mg/kg、0.1 mg/kg、0.2 mg/kg、0.3 mg/kg、0.4 mg/kg、0.5 mg/kg、1 mg/kg、1.1 mg/kg、1.2 mg/kg、1.3 mg/kg、1.4 mg/kg、1.5 mg/kg、1.6 mg/kg、1.7 mg/kg、1.8 mg/kg、1.9 mg/kg、2 mg/kg、2.1 mg/kg、2.2 mg/kg、2.3 mg/kg、2.4 mg/kg、2.5 mg/kg、2.6 mg/kg、2.7 mg/kg、2.8 mg/kg、2.9 mg/kg、3.0 mg/kg、3.1 mg/kg、3.2 mg/kg、3.3 mg/kg、3.4 mg/kg、3.5 mg/kg、3.6 mg/kg、3.7 mg/kg、3.8 mg/kg、3.9 mg/kg、4 mg/kg、4.1 mg/kg、4.2 mg/kg、4.3 mg/kg、4.4 mg/kg、4.5 mg/kg、4.6 mg/kg、4.7 mg/kg、4.8 mg/kg、4.9 mg/kg、5 mg/kg、5.1 mg/kg、5.2 mg/kg、5.3 mg/kg、5.4 mg/kg、5.5 mg/kg、5.6 mg/kg、5.7 mg/kg、5.8 mg/kg、5.9 mg/kg、6 mg/kg、6.1 mg/kg、6.2 mg/kg、6.3 mg/kg、6.4 mg/kg、6.5 mg/kg、6.6 mg/kg、6.7 mg/kg、6.8 mg/kg、6.9 mg/kg、7 mg/kg、7.1 mg/kg、7.2 mg/kg、7.3 mg/kg、7.4 mg/kg、7.5 mg/kg、7.6 mg/kg、7.7 mg/kg、7.8 mg/kg、7.9 mg/kg、8 mg/kg、8.1 mg/kg、8.2 mg/kg、8.3 mg/kg、8.4 mg/kg、8.5 mg/kg、8.6 mg/kg、8.7 mg/kg、8.8 mg/kg、8.9 mg/kg、9 mg/kg、9.1 mg/kg、9.2 mg/kg、9.3 mg/kg、9.4 mg/kg、9.5 mg/kg、9.6 mg/kg、9.7 mg/kg、9.8 mg/kg、9.9 mg/kg、10 mg/kg、11 mg/kg、12 mg/kg、13mg/kg、14 mg/kg、15 mg/kg、16 mg/kg、17 mg/kg、18 mg/kg、19 mg/kg、20 mg/kg、21 mg/kg、22 mg/kg、23mg/kg、24 mg/kg、25 mg/kg、26 mg/kg、27 mg/kg、28 mg/kg、29 mg/kg、30 mg/kg、31 mg/kg、32 mg/kg、33mg/kg、34 mg/kg、35 mg/kg、36 mg/kg、37 mg/kg、38 mg/kg、39 mg/kg、40 mg/kg、41 mg/kg、42 mg/kg、43mg/kg、44 mg/kg、45 mg/kg、46 mg/kg、47 mg/kg、48 mg/kg、49 mg/kg至50 mg/kg體重的量來施用。The xanthine dehydrogenase (XDH) dsRNA agent and the xanthine dehydrogenase (XDH) antisense polynucleotide agent are delivered in a pharmaceutical composition in a dosage sufficient to inhibit xanthine dehydrogenase (XDH) gene expression. In certain embodiments of the invention, the dosage of the xanthine dehydrogenase (XDH) dsRNA agent or the xanthine dehydrogenase (XDH) antisense polynucleotide agent is 0.01 to 200.0 mg per kilogram of recipient body weight per day, typically 1 to 50 mg/kg body weight, 5 to 40 mg/kg body weight, 10 to 30 mg/kg body weight, 1 to 20 mg/kg body weight, 1 to 10 mg/kg body weight, 4 to 15 mg/kg body weight per day, inclusive. For example, each single administration of a xanthine dehydrogenase (XDH) dsRNA reagent or a kg, 0.2 mg/kg, 0.3 mg/kg, 0.4 mg/kg, 0.5 mg/kg, 1 mg/kg, 1.1 mg/kg, 1.2 mg/kg, 1.3 mg/kg, 1.4 mg/kg, 1.5 mg/ kg, 1.6 mg/kg, 1.7 mg/kg, 1.8 mg/kg, 1.9 mg/kg, 2 mg/kg, 2.1 mg/kg, 2.2 mg/kg, 2.3 mg/kg, 2.4 mg/kg, 2.5 mg/ kg, 2.6 mg/kg, 2.7 mg/kg, 2.8 mg/kg, 2.9 mg/kg, 3.0 mg/kg, 3.1 mg/kg, 3.2 mg/kg, 3.3 mg/kg, 3.4 mg/kg, 3.5 mg/ kg, 3.6 mg/kg, 3.7 mg/kg, 3.8 mg/kg, 3.9 mg/kg, 4 mg/kg, 4.1 mg/kg, 4.2 mg/kg, 4.3 mg/kg, 4.4 mg/kg, 4.5 mg/ kg, 4.6 mg/kg, 4.7 mg/kg, 4.8 mg/kg, 4.9 mg/kg, 5 mg/kg, 5.1 mg/kg, 5.2 mg/kg, 5.3 mg/kg, 5.4 mg/kg, 5.5 mg/ kg, 5.6 mg/kg, 5.7 mg/kg, 5.8 mg/kg, 5.9 mg/kg, 6 mg/kg, 6.1 mg/kg, 6.2 mg/kg, 6.3 mg/kg, 6.4 mg/kg, 6.5 mg/ kg, 6.6 mg/kg, 6.7 mg/kg, 6.8 mg/kg, 6.9 mg/kg, 7 mg/kg, 7.1 mg/kg, 7.2 mg/kg, 7.3 mg/kg, 7.4 mg/kg, 7.5 mg/ kg, 7.6 mg/kg, 7.7 mg/kg, 7.8 mg/kg, 7.9 mg/kg, 8 mg/kg, 8.1 mg/kg, 8.2 mg/kg, 8.3 mg/kg, 8.4 mg/kg, 8.5 mg/ kg, 8.6 mg/kg, 8.7 mg/kg, 8.8 mg/kg, 8.9 mg/kg, 9 mg/kg, 9.1 mg/kg, 9.2 mg/kg, 9.3 mg/kg, 9.4 mg/kg, 9.5 mg/ kg, 9.6 mg/kg, 9.7 mg/kg, 9.8 mg/kg, 9.9 mg/kg, 10 mg/kg, 11 mg/kg, 12 mg/kg, 13mg/kg, 14 mg/kg, 15 mg/kg , 16 mg/kg, 17 mg/kg, 18 mg/kg, 19 mg/kg, 20 mg/kg, 21 mg/kg, 22 mg/kg, 23mg/kg, 24 mg/kg, 25 mg/kg, 26 mg/kg, 27 mg/kg, 28 mg/kg, 29 mg/kg, 30 mg/kg, 31 mg/kg, 32 mg/kg, 33mg/kg, 34 mg/kg, 35 mg/kg, 36 mg/kg, 37 mg/kg, 38 mg/kg, 39 mg/kg, 40 mg/kg, 41 mg/kg, 42 mg/kg, 43mg/kg, 44 mg/kg, 45 mg/kg, 46 mg /kg, 47 mg/kg, 48 mg/kg, 49 mg/kg to 50 mg/kg body weight.
在確定本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑的遞送劑量和時間時可以考慮多種因素。遞送的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑的絕對量將取决於多種因素,包括共同治療、劑量數和個體對象參數,包括年齡、身體狀况、體格大小和體重。這些是本領域普通技術人員衆所公知的因素,並且可以通過常規實驗解决。在一些實施方案中,可以使用最大劑量,即根據合理的醫學判斷的最高安全劑量。Various factors may be considered in determining the dosage and timing of delivery of the xanthine dehydrogenase (XDH) dsRNA reagents of the invention. The absolute amount of xanthine dehydrogenase (XDH) dsRNA agent or xanthine dehydrogenase (XDH) antisense polynucleotide agent delivered will depend on a variety of factors, including co-treatment, number of doses, and individual subject parameters, including age, Physical condition, size and weight. These factors are well known to those of ordinary skill in the art and can be addressed through routine experimentation. In some embodiments, the maximum dose may be used, ie, the highest safe dose based on sound medical judgment.
在一些實施方案中,本發明的方法可包括向對象施用1、2、3、4、5、6、7、8、9、10或更多個劑量的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑。在一些情况下,可以至少每天、每隔一天、每周、每隔一周、每月等向對象施用藥物化合物(例如,包含黃嘌呤脫氫酶(XDH) dsRNA試劑或包含黃嘌呤脫氫酶(XDH)反義多核苷酸劑)的劑量,可以每天給藥一次或每天給藥多於一次,例如在一個24小時周期內給藥2、3、4、5或更多次。本發明的藥物組合物可以每天給藥一次;或者黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑可以在一天中以適當的間隔以兩個、三個或更多個亞劑量給藥,或者甚至使用連續輸注或通過控釋製劑遞送。在本發明方法的一些實施方案中,將本發明的藥物組合物每天一次或更多次、每周一次或更多次、每月一次或更多次或每年一次或更多次施用給對象。In some embodiments, methods of the invention may comprise administering to a subject 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 or more doses of a xanthine dehydrogenase (XDH) dsRNA agent or xanthine dehydrogenase (XDH) antisense polynucleotide reagent. In some cases, a pharmaceutical compound (e.g., a dsRNA agent containing xanthine dehydrogenase (XDH) or a dsRNA agent containing xanthine dehydrogenase (XDH)) may be administered to the subject at least daily, every other day, weekly, every other week, monthly, etc. ( The pharmaceutical composition of the present invention can be administered once a day; or the xanthine dehydrogenase (XDH) dsRNA reagent or the xanthine dehydrogenase (XDH) antisense polynucleotide reagent can be administered twice a day at appropriate intervals. Three or more sub-doses are administered, or even using continuous infusion or delivered via a controlled release formulation. In some embodiments of the methods of the invention, a pharmaceutical composition of the invention is administered to the subject once or more daily, once or more weekly, once or more monthly, or once or more annually.
在某些方面,本發明的方法包括單獨施用藥物化合物;與一種或更多種其他黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑組合;和/或與對患有黃嘌呤脫氫酶(XDH)相關疾病或病症的對象施用的其他藥物療法或治療活動或方案組合。藥物化合物可以以藥物組合物的形式給藥。本發明方法中使用的藥物組合物可以是無菌的,並且含有一定量的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑,其會將黃嘌呤脫氫酶(XDH)多肽的活性降低到足以在適合施用於對象的重量或體積單位中產生所需響應的水平。可以根據不同參數選擇向對象施用的包含黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑藥物組合物的劑量以降低黃嘌呤脫氫酶(XDH)蛋白活性,特別是根據所使用的給藥方式和對象的狀態來進行選擇。其他因素包括所需的治療時間。如果對象在初始劑量下的響應不足,則可以在患者耐受性允許的範圍內採用更高的劑量(或通過不同的、更局部的遞送途徑有效地提高劑量)。 治療 In certain aspects, methods of the invention include administering a pharmaceutical compound alone; in combination with one or more other xanthine dehydrogenase (XDH) dsRNA agents or xanthine dehydrogenase (XDH) antisense polynucleotide agents; and /or in combination with other drug therapies or therapeutic activities or regimens administered to subjects with xanthine dehydrogenase (XDH)-related diseases or conditions. Pharmaceutical compounds can be administered in the form of pharmaceutical compositions. The pharmaceutical composition used in the method of the present invention can be sterile and contain an amount of xanthine dehydrogenase (XDH) dsRNA reagent or xanthine dehydrogenase (XDH) antisense polynucleotide reagent, which will convert xanthine The activity of the dehydrogenase (XDH) polypeptide is reduced to a level sufficient to produce a desired response in units of weight or volume suitable for administration to a subject. The dosage of a pharmaceutical composition comprising a xanthine dehydrogenase (XDH) dsRNA agent or a xanthine dehydrogenase (XDH) antisense polynucleotide agent administered to a subject to reduce xanthine dehydrogenase (XDH) can be selected based on different parameters. The activity of the protein is particularly selected based on the mode of administration used and the state of the subject. Other factors include the length of treatment required. If the subject's response at the initial dose is insufficient, a higher dose may be administered (or the dose may be effectively increased via a different, more local delivery route) as tolerated by the patient. treatment
如本文所用的,術語“預防”或“進行預防”,當用於指將受益於黃嘌呤脫氫酶(XDH)基因表達降低的疾病、病症或其病况時,是指對象發生與此類疾病、病症或病况相關的症狀的可能性降低,所述與此類疾病、病症或病况相關的症狀是例如與由黃嘌呤脫氫酶(XDH)活化引起或與之相關的疾病或病症相關的症狀,例如痛風。在這樣的情况下發生痛風的可能性被降低:例如,當個體具有一種或更多種痛風風險因素,其相對於具有相同風險因素且未接受本文所述治療的人群而言,未能發展出相關疾病、病症或病症,或與此類疾病、病症或病症相關的症狀的發展程度降低(例如,在臨床上患有該疾病或病症的量表上降低至少約 10%),或延遲症狀的表現(例如,延遲數天、數周、數月或數年),則被認為是有效的預防。As used herein, the term "prevent" or "prevent," when used to refer to a disease, disorder, or condition thereof that would benefit from reduced expression of the xanthine dehydrogenase (XDH) gene, refers to the occurrence of a disease in a subject associated with such disease Reduced likelihood of symptoms associated with, for example, a disease or condition caused by or associated with xanthine dehydrogenase (XDH) activation , such as gout. The likelihood of developing gout is reduced when, for example, an individual with one or more risk factors for gout fails to develop gout relative to a population with the same risk factors who does not receive treatment as described herein. Reduced progression (e.g., a reduction of at least approximately 10% on a scale of clinically having the disease or condition), or delayed symptoms of a related disease, condition, or condition, or of symptoms associated with such disease, condition, or condition manifestation (e.g., delayed by days, weeks, months, or years), prevention is considered effective.
對於黃嘌呤脫氫酶(XDH)相關疾病和病症,其中黃嘌呤脫氫酶(XDH)多肽的水平和/或活性的降低可有效治療該疾病或病症,可以使用本發明的方法和黃嘌呤脫氫酶(XDH) dsRNA試劑來治療以抑制黃嘌呤脫氫酶(XDH)表達。可以用本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑和本發明的治療方法治療的疾病和病症的實例包括但不限於:高尿酸血症、痛風、NAFLD、NASH、代謝紊亂、胰島素抵抗、心血管疾病、2型糖尿病、Lesch Nyhan症候群、肝醣儲積症(GSD),例如I型GSD以及與氧化應激有關的疾病,例如慢性低度炎症;或其他XDH相關疾病。此類疾病和病症在本文中可稱為“黃嘌呤脫氫酶(XDH)相關疾病和病症”和“由黃嘌呤脫氫酶(XDH)引起和/或調節的疾病和病症”。For xanthine dehydrogenase (XDH) related diseases and conditions, in which a reduction in the level and/or activity of the xanthine dehydrogenase (XDH) polypeptide is effective in treating the disease or condition, the methods of the present invention and xanthine dehydrogenation can be used. Hydrogenase (XDH) dsRNA reagent was used to treat xanthine dehydrogenase (XDH) expression. Examples of diseases and conditions that may be treated with the xanthine dehydrogenase (XDH) dsRNA reagents or xanthine dehydrogenase (XDH) antisense polynucleotide reagents of the invention and the treatment methods of the invention include, but are not limited to: Hyperuricemia Gout, NAFLD, NASH, metabolic disorders, insulin resistance, cardiovascular disease, type 2 diabetes, Lesch Nyhan syndrome, glycostorage disorders (GSD), such as GSD type I, and diseases related to oxidative stress, such as chronic Low-grade inflammation; or other XDH-related diseases. Such diseases and conditions may be referred to herein as "xanthine dehydrogenase (XDH)-related diseases and conditions" and "diseases and conditions caused and/or modulated by xanthine dehydrogenase (XDH)."
在本發明的某些方面,可以在診斷黃嘌呤脫氫酶(XDH)相關疾病或病症之前或之後的一個或更多個時間向對象施用本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑。在本發明的一些方面,對象處於患有或發展黃嘌呤脫氫酶(XDH)相關疾病或病症的風險中。與發展黃嘌呤脫氫酶(XDH)相關疾病或病症的對照風險相比,有發展黃嘌呤脫氫酶(XDH)相關疾病或病症風險的對象是發展黃嘌呤脫氫酶(XDH)相關疾病或病症的可能性提高的對象。在本發明的一些實施方案中,與風險的對照水平相比,風險水平在統計上是顯著的。有風險的對象可包括,例如:是或將是具有預先存在的疾病和/或遺傳異常的對象,其使得該對象比沒有預先存在的疾病或遺傳異常的對照對象更易患黃嘌呤脫氫酶(XDH)相關疾病或病症;具有黃嘌呤脫氫酶(XDH)相關疾病或病症的家族和/或個人病史的對象;以及先前已接受黃嘌呤脫氫酶(XDH)相關疾病或病症治療的對象。應當理解,使對象對黃嘌呤脫氫酶(XDH)相關疾病或病症更易感的預先存在的疾病和/或遺傳異常可以是這樣的疾病或遺傳異常:當存在時,其先前已被確定為與發展黃嘌呤脫氫酶(XDH)相關疾病或病症的更高可能性具有相關關係。In certain aspects of the invention, a xanthine dehydrogenase (XDH) dsRNA agent of the invention can be administered to a subject at one or more times before or after diagnosis of a xanthine dehydrogenase (XDH)-related disease or condition or Xanthine dehydrogenase (XDH) antisense polynucleotide reagent. In some aspects of the invention, the subject is at risk of suffering from or developing a xanthine dehydrogenase (XDH)-related disease or disorder. A subject at risk of developing a xanthine dehydrogenase (XDH)-related disease or condition who is at risk of developing a xanthine dehydrogenase (XDH)-related disease or condition compared to a control risk of developing a xanthine dehydrogenase (XDH)-related disease or condition Objects with increased likelihood of illness. In some embodiments of the invention, the level of risk is statistically significant compared to a control level of risk. A subject at risk may include, for example, a subject who is or will be a subject with a pre-existing disease and/or genetic abnormality that renders the subject more susceptible to xanthine dehydrogenase than a control subject without the pre-existing disease or genetic abnormality ( XDH)-related diseases or conditions; subjects with a family and/or personal history of xanthine dehydrogenase (XDH)-related diseases or conditions; and subjects who have been previously treated for xanthine dehydrogenase (XDH)-related diseases or conditions. It will be understood that a pre-existing disease and/or genetic abnormality that predisposes a subject to a xanthine dehydrogenase (XDH)-related disease or disorder may be a disease or genetic abnormality that, when present, has been previously identified as being associated with There is an association with a higher likelihood of developing xanthine dehydrogenase (XDH)-related diseases or conditions.
應當理解,可以基於個體對象的醫學狀况向對象施用黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑。例如,為對象提供的醫療保健可以評估從對象獲得的樣品中測量的黃嘌呤脫氫酶(XDH)水平,並確定通過施用本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑來降低對象的黃嘌呤脫氫酶(XDH)水平是可期望的。在一個非限制性實例中,可以從對象獲得生物樣品,例如血液或血清樣品,並且在樣品中確定對象的尿酸水平。向對象施用黃嘌呤脫氫酶(XDH)dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑,並且在給藥後從對象獲得血液或血清樣品,並且使用該樣品測定尿酸水平,並將該結果與對象給藥前(先前)樣品中確定的結果進行比較。與給藥前水平相比,隨後樣品中對象的尿酸水平降低則表明所施用的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑在降低對象的黃嘌呤脫氫酶(XDH)水平方面的功效。在一個非限制性實例中,尿酸水平升高可以被認為是黃嘌呤脫氫酶(XDH)相關病症的生理特徵,即使對象沒有被診斷為患有黃嘌呤脫氫酶(XDH)相關疾病,例如本文公開的疾病。醫療保健提供者可以監測對象的尿酸水平的變化,作為施用的本發明的黃嘌呤脫氫酶(XDH)dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑的功效的量度。在一個非限制性實例中,黃嘌呤脫氫酶(XDH)相關疾病是高尿酸血症、痛風、NAFLD、NASH、代謝紊亂、胰島素抵抗、心血管疾病、2型糖尿病、Lesch Nyhan症候群、肝醣儲積症(GSD),例如I型GSD以及與氧化應激有關的疾病,例如慢性低度炎症;或其他XDH相關疾病。It will be appreciated that a xanthine dehydrogenase (XDH) dsRNA agent or a xanthine dehydrogenase (XDH) antisense polynucleotide agent may be administered to a subject based on the individual subject's medical condition. For example, health care provided to a subject may assess xanthine dehydrogenase (XDH) levels measured in a sample obtained from the subject and determine the xanthine dehydrogenase (XDH) dsRNA reagent or xanthine dehydrogenase by administering the present invention It is desirable to use antisense polynucleotide reagents to reduce xanthine dehydrogenase (XDH) levels in a subject. In one non-limiting example, a biological sample, such as a blood or serum sample, can be obtained from a subject and the subject's uric acid level determined in the sample. administering a xanthine dehydrogenase (XDH) dsRNA reagent or a xanthine dehydrogenase (XDH) antisense polynucleotide reagent to a subject, and obtaining a blood or serum sample from the subject after administration, and using the sample to determine uric acid levels, This result is compared to the result determined in the subject's pre-dose (previous) sample. A decrease in the subject's uric acid levels in subsequent samples compared to pre-dose levels indicates that the administered Xanthine Dehydrogenase (XDH) dsRNA Reagent or Efficacy in terms of xanthine dehydrogenase (XDH) levels. In one non-limiting example, elevated uric acid levels may be considered a physiological signature of a xanthine dehydrogenase (XDH)-related disorder, even if the subject has not been diagnosed with a xanthine dehydrogenase (XDH)-related disorder, such as herein Public disease. A healthcare provider can monitor changes in a subject's uric acid levels as a measure of the efficacy of an administered xanthine dehydrogenase (XDH) dsRNA agent or xanthine dehydrogenase (XDH) antisense polynucleotide agent of the invention. In a non-limiting example, xanthine dehydrogenase (XDH) related diseases are hyperuricemia, gout, NAFLD, NASH, metabolic disorders, insulin resistance, cardiovascular disease, type 2 diabetes, Lesch Nyhan syndrome, glycogen Storage disorders (GSD), such as GSD type I and diseases related to oxidative stress, such as chronic low-grade inflammation; or other XDH-related diseases.
本發明方法的某些實施方案包括調整治療,所述治療包括至少部分地基於對對象中由治療引起的黃嘌呤脫氫酶(XDH)相關疾病或病症一種或更多種生理特徵的變化的評估,來向對象施用本發明的dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑。例如,在本發明的一些實施方案中,可以確定對對象施用的本發明的dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑的作用,並用於幫助調節隨後向對象施用的本發明的dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑的量。在一個非限制性實例中,對對象施用本發明的dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑,並在施用後測定對象尿酸水平;並且至少部分基於所確定的水平,確定是否需要更高量的dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑以提高所施用試劑的生理作用,例如降低或進一步降低對象的尿酸水平。在另一個非限制性實例中,向對象施用本發明的dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑,並在給藥後確定對象的尿酸水平,並且至少部分地基於所確定的水平,預期向對象施用更低量的dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑。Certain embodiments of the methods of the present invention include modifying a treatment based, at least in part, on an assessment of a change in one or more physiological characteristics of a xanthine dehydrogenase (XDH)-related disease or disorder in a subject caused by the treatment , to administer the dsRNA reagent or xanthine dehydrogenase (XDH) antisense polynucleotide reagent of the invention to a subject. For example, in some embodiments of the invention, the effects of a dsRNA agent or a xanthine dehydrogenase (XDH) antisense polynucleotide agent of the invention administered to a subject can be determined and used to help modulate subsequent administration of the agent to the subject. Invent the amount of dsRNA reagent or xanthine dehydrogenase (XDH) antisense polynucleotide reagent. In one non-limiting example, a dsRNA agent or a xanthine dehydrogenase (XDH) antisense polynucleotide agent of the invention is administered to a subject, and the subject's uric acid level is determined after administration; and based at least in part on the determined level, Determine whether higher amounts of dsRNA reagent or xanthine dehydrogenase (XDH) antisense polynucleotide reagent are required to enhance the physiological effects of the administered reagent, such as reducing or further reducing the subject's uric acid levels. In another non-limiting example, a dsRNA agent or a xanthine dehydrogenase (XDH) antisense polynucleotide agent of the invention is administered to a subject, and the subject's uric acid level is determined following administration, and is based at least in part on the At the determined levels, it is expected that subjects will be administered lower amounts of dsRNA reagent or xanthine dehydrogenase (XDH) antisense polynucleotide reagent.
因此,本發明的一些實施方案包括評估由對象先前治療引起的一種或更多種生理特徵的變化,包括血液和尿液中尿酸水平的降低,疼痛的減輕(例如由痛風引起的疼痛),炎症的減少等,以調整隨後施用於對象的本發明的dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑的量。本發明方法的一些實施方案包括對黃嘌呤脫氫酶(XDH)相關疾病或病症的生理特徵的1、2、3、4、5、6或更多次測定;評估和/或監測施用的本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑的功效;並任選地使用所測定的結果來調整以下一項或更多項:本發明的dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑治療對象中黃嘌呤脫氫酶(XDH)相關疾病或病症的劑量、給藥方案和/或給藥頻率。在本發明方法的一些實施方案中,向對象施用有效量的本發明的dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑的期望結果是:與為對象確定的先前相比,對象黃嘌呤脫氫酶(XDH)轉錄物水平、血漿尿酸水平、黃嘌呤脫氫酶(XDH)基因表達的降低。Accordingly, some embodiments of the invention include assessment of changes in one or more physiological characteristics resulting from prior treatment of the subject, including reduction in uric acid levels in blood and urine, reduction in pain (e.g., pain caused by gout), inflammation reduction, etc., to adjust the amount of the dsRNA agent or xanthine dehydrogenase (XDH) antisense polynucleotide agent of the invention subsequently administered to the subject. Some embodiments of the methods of the present invention include 1, 2, 3, 4, 5, 6 or more determinations of physiological characteristics of xanthine dehydrogenase (XDH)-related diseases or disorders; assessing and/or monitoring administered the efficacy of the inventive xanthine dehydrogenase (XDH) dsRNA reagent or xanthine dehydrogenase (XDH) antisense polynucleotide reagent; and optionally use the results of the assay to adjust one or more of the following: Dosages, dosing regimens and/or dosing frequencies of the inventive dsRNA reagents or xanthine dehydrogenase (XDH) antisense polynucleotide reagents for treating xanthine dehydrogenase (XDH)-related diseases or conditions in subjects. In some embodiments of the methods of the invention, the desired outcome of administering to a subject an effective amount of a dsRNA agent or a xanthine dehydrogenase (XDH) antisense polynucleotide agent of the invention is: compared to previously determined for the subject, Subjects were reduced xanthine dehydrogenase (XDH) transcript levels, plasma uric acid levels, and xanthine dehydrogenase (XDH) gene expression.
如本文所用,術語“治療”、“治療性”或“治療的”當用於黃嘌呤脫氫酶(XDH)相關疾病或病症時可指預防性治療、降低對象發展黃嘌呤脫氫酶(XDH)相關疾病或病症的可能性,並且也可以指在對象已經發展出黃嘌呤脫氫酶(XDH)相關疾病或病症之後為了消除或降低黃嘌呤脫氫酶(XDH)相關疾病或病症的水平而進行的治療、防止黃嘌呤脫氫酶(XDH)相關疾病或病症變得更嚴重,和/或與在不存在降低對象中黃嘌呤脫氫酶(XDH)多肽活性的療法的情况下的對象相比,減緩對象中黃嘌呤脫氫酶(XDH)相關疾病或病症的進展。As used herein, the terms "treat," "therapeutic," or "therapeutic" when used in reference to a xanthine dehydrogenase (XDH)-related disease or condition may refer to preventive treatment, reducing the development of xanthine dehydrogenase (XDH) in a subject ) related disease or condition, and may also refer to the elimination or reduction of the level of xanthine dehydrogenase (XDH)-related disease or condition after the subject has developed the xanthine dehydrogenase (XDH)-related disease or condition Treatment to prevent a xanthine dehydrogenase (XDH)-related disease or condition from becoming more severe, and/or be associated with a subject in the absence of therapy that reduces the activity of the xanthine dehydrogenase (XDH) polypeptide in the subject Ratio, slows the progression of a xanthine dehydrogenase (XDH)-related disease or condition in a subject.
本發明的試劑、組合物和方法的某些實施方案可用於抑制黃嘌呤脫氫酶(XDH)基因表達。如本文所用,關於黃嘌呤脫氫酶(XDH)基因的表達,術語“抑制”、“沉默”、“減少”、“下調”和“敲低”是指例如通過以下一種或更多種情况改變黃嘌呤脫氫酶(XDH)基因的表達:分別與由黃嘌呤脫氫酶(XDH)基因轉錄的RNA的對照水平、所表達的黃嘌呤脫氫酶(XDH)的活性對照水平或由mRNA 翻譯的黃嘌呤脫氫酶(XDH)的對照水平相比,當細胞、細胞群、組織、器官或對象與本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑接觸(例如,用其處理)時,其中由基因轉錄的RNA的水平、表達的黃嘌呤脫氫酶(XDH)的活性水平,以及由細胞、細胞群、組織、器官或對象中的mRNA翻譯的黃嘌呤脫氫酶(XDH)多肽、蛋白質或蛋白質亞基的水平降低。在一些實施方案中,對照水平是未接觸黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑(例如用其處理)的細胞、組織、器官或對象中的水平。 施用方法 Certain embodiments of the agents, compositions, and methods of the invention can be used to inhibit xanthine dehydrogenase (XDH) gene expression. As used herein, with respect to the expression of the xanthine dehydrogenase (XDH) gene, the terms "inhibit,""silence,""reduce,""down-regulate" and "knock-down" mean, for example, alteration by one or more of the following Expression of the xanthine dehydrogenase (XDH) gene: respectively compared with the control level of RNA transcribed by the xanthine dehydrogenase (XDH) gene, the activity control level of the expressed xanthine dehydrogenase (XDH) or translated by When a cell, cell population, tissue, organ or subject is reacted with a xanthine dehydrogenase (XDH) dsRNA reagent or a The level of RNA transcribed from the gene, the level of xanthine dehydrogenase (XDH) activity expressed by the cell, cell population, tissue, organ or subject when exposed to (e.g., treated with) a polynucleotide reagent Decreased levels of xanthine dehydrogenase (XDH) polypeptides, proteins, or protein subunits translated from the mRNA. In some embodiments, the control level is a cell, tissue, organ or subject that has not been exposed to (e.g., treated with) a xanthine dehydrogenase (XDH) dsRNA agent or a xanthine dehydrogenase (XDH) antisense polynucleotide agent. medium level. Application method
黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑的多種給藥途徑可用於本發明的方法。特定遞送模式的選擇將至少部分取决於所治療的特定病症和治療功效所需的劑量。一般而言,本發明的方法可以使用醫學上可接受的任何給藥模式來實施,這意味著產生黃嘌呤脫氫酶(XDH)相關疾病或病症的有效治療水平而不引起臨床上不可接受的副作用的任何模式。在本發明的一些實施方案中,黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑可以通過口服、腸內、黏膜、皮下和/或腸胃外途徑施用。術語“腸胃外”包括皮下、靜脈內、鞘內、肌內、腹膜內和胸骨內注射或輸注技術。其他途徑包括但不限於鼻(例如,通過胃鼻管)、經皮、陰道、直腸、舌下和吸入。本發明的遞送途徑可包括鞘內、心室內或顱內。在本發明的一些實施方案中,黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑可以放置在緩釋基質中並通過將基質放置在對象中來施用。在本發明的一些方面,黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑可以使用塗覆有靶向特定細胞或細胞器的遞送劑的納米顆粒遞送至對象細胞。多種遞送方式、方法、試劑是本領域已知的。遞送方法和遞送劑的非限制性實例在本文別處另外提供。在本發明的一些方面,關於黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑的術語“遞送”可以是指:向細胞或對象施用一種或更多種“裸”黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑序列。在本發明的某些方面,“遞送”是指通過轉染方式給予細胞或對象、將包含黃嘌呤脫氫酶(XDH) dsRNA 試劑或黃嘌呤脫氫酶(XDH) 反義多核苷酸試劑的細胞遞送給對象、將編碼黃嘌呤脫氫酶(XDH) dsRNA試劑或 黃嘌呤脫氫酶(XDH) 反義多核苷酸試劑的載體遞送到細胞和/或對象等中。使用轉染方式遞送黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑可包括向細胞和/或對象施用載體。A variety of routes of administration of xanthine dehydrogenase (XDH) dsRNA agents or xanthine dehydrogenase (XDH) antisense polynucleotide agents can be used in the methods of the invention. The selection of a particular delivery mode will depend, at least in part, on the specific condition being treated and the dosage required for therapeutic efficacy. In general, the methods of the present invention may be practiced using any mode of administration that is medically acceptable, meaning that producing effective therapeutic levels of xanthine dehydrogenase (XDH)-related diseases or conditions without causing clinically unacceptable Any pattern of side effects. In some embodiments of the invention, a xanthine dehydrogenase (XDH) dsRNA agent or a xanthine dehydrogenase (XDH) antisense polynucleotide agent can be administered by oral, enteral, mucosal, subcutaneous, and/or parenteral routes Apply. The term "parenteral" includes subcutaneous, intravenous, intrathecal, intramuscular, intraperitoneal and intrasternal injection or infusion techniques. Other routes include, but are not limited to, nasal (e.g., via gastronasal tube), transdermal, vaginal, rectal, sublingual, and inhalation. Delivery routes of the present invention may include intrathecal, intraventricular, or intracranial. In some embodiments of the invention, a xanthine dehydrogenase (XDH) dsRNA agent or a xanthine dehydrogenase (XDH) antisense polynucleotide agent can be placed in a sustained release matrix and administered by placing the matrix in a subject. Apply. In some aspects of the invention, xanthine dehydrogenase (XDH) dsRNA agents or xanthine dehydrogenase (XDH) antisense polynucleotide agents can use nanoparticles coated with a delivery agent that targets specific cells or organelles. Delivered to target cells. A variety of delivery modes, methods, and reagents are known in the art. Non-limiting examples of delivery methods and delivery agents are provided elsewhere herein. In some aspects of the invention, the term "delivery" with respect to a xanthine dehydrogenase (XDH) dsRNA agent or a xanthine dehydrogenase (XDH) antisense polynucleotide agent may refer to administering to a cell or subject one or more Multiple "naked" xanthine dehydrogenase (XDH) dsRNA reagents or xanthine dehydrogenase (XDH) antisense polynucleotide reagent sequences. In certain aspects of the invention, "delivery" means administering to a cell or subject by transfection a substance that will contain a xanthine dehydrogenase (XDH) dsRNA reagent or a xanthine dehydrogenase (XDH) antisense polynucleotide reagent. Cells are delivered to a subject, a vector encoding a xanthine dehydrogenase (XDH) dsRNA reagent or a xanthine dehydrogenase (XDH) antisense polynucleotide reagent is delivered to a cell and/or a subject, etc. Delivery of a xanthine dehydrogenase (XDH) dsRNA agent or a xanthine dehydrogenase (XDH) antisense polynucleotide agent using transfection may include administering a vector to a cell and/or subject.
在本發明的一些方法中,一種或更多種黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑可以以製劑形式給藥,也可以在藥學上可接受的溶液中給藥,其通常可以含有藥學上可接受濃度的鹽、緩衝劑、防腐劑、相容的載體、佐劑和任選的其他治療成分。在本發明的一些實施方案中,黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑可以與另一種治療劑一起配製成用於同時給藥。根據本發明的方法,黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑可以以藥物組合物的形式給藥。通常,藥物組合物包含黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑和任選的藥學上可接受的載體。藥學上可接受的載體是本領域普通技術人員公知的。如本文所用,藥學上可接受的載體是指不干擾活性成分生物活性(例如,黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑抑制細胞或對象中黃嘌呤脫氫酶(XDH)基因表達的能力)有效性的無毒材料。施用和遞送用於治療用途的黃嘌呤脫氫酶(XDH)dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑的多種方法是本領域已知的並且可用於本發明的方法中。In some methods of the invention, one or more xanthine dehydrogenase (XDH) dsRNA reagents or xanthine dehydrogenase (XDH) antisense polynucleotide reagents can be administered in the form of a preparation, or can be administered pharmaceutically It is administered in an acceptable solution, which may generally contain pharmaceutically acceptable concentrations of salts, buffers, preservatives, compatible carriers, adjuvants, and optionally other therapeutic ingredients. In some embodiments of the invention, a xanthine dehydrogenase (XDH) dsRNA agent or a xanthine dehydrogenase (XDH) antisense polynucleotide agent can be formulated with another therapeutic agent for simultaneous administration. According to the methods of the present invention, the xanthine dehydrogenase (XDH) dsRNA agent or the xanthine dehydrogenase (XDH) antisense polynucleotide agent can be administered in the form of a pharmaceutical composition. Typically, pharmaceutical compositions comprise a xanthine dehydrogenase (XDH) dsRNA agent or a xanthine dehydrogenase (XDH) antisense polynucleotide agent and optionally a pharmaceutically acceptable carrier. Pharmaceutically acceptable carriers are well known to those of ordinary skill in the art. As used herein, a pharmaceutically acceptable carrier refers to a cell or subject that does not interfere with the biological activity of the active ingredient (e.g., a xanthine dehydrogenase (XDH) dsRNA agent or a xanthine dehydrogenase (XDH) antisense polynucleotide agent). A non-toxic material that has the ability to express xanthine dehydrogenase (XDH) genes). Various methods of administering and delivering xanthine dehydrogenase (XDH) dsRNA agents or xanthine dehydrogenase (XDH) antisense polynucleotide agents for therapeutic use are known in the art and can be used in the methods of the invention .
藥學上可接受的載體包括稀釋劑、填充劑、鹽、緩衝劑、穩定劑、增溶劑和本領域公知的其他材料。示例性的藥學上可接受的載體描述於美國專利No. 5,211,657中,而其他載體是本領域技術人員已知的。這種製劑通常可以含有鹽、緩衝劑、防腐劑、相容的載體和任選的其他治療劑。用於醫藥時,該鹽應當是藥學上可接受的,但非藥學上可接受的鹽可以方便地用於製備其藥學上可接受的鹽,不排除在本發明的範圍之外。此類藥理學和藥學上可接受的鹽包括但不限於由以下酸製備的鹽:鹽酸、氫溴酸、硫酸、硝酸、磷酸、馬來酸、乙酸、水楊酸、檸檬酸、甲酸、丙二酸、琥珀酸等。此外,藥學上可接受的鹽可以製備為鹼金屬鹽或鹼土金屬鹽,例如鈉鹽、鉀鹽或鈣鹽。Pharmaceutically acceptable carriers include diluents, fillers, salts, buffers, stabilizers, solubilizers and other materials known in the art. Exemplary pharmaceutically acceptable carriers are described in U.S. Patent No. 5,211,657, and other carriers are known to those skilled in the art. Such preparations may generally contain salts, buffers, preservatives, compatible carriers, and optionally other therapeutic agents. When used in medicine, the salt should be pharmaceutically acceptable, but non-pharmaceutically acceptable salts can be conveniently used to prepare pharmaceutically acceptable salts thereof, which are not excluded from the scope of the present invention. Such pharmacologically and pharmaceutically acceptable salts include, but are not limited to, salts prepared from the following acids: hydrochloric acid, hydrobromic acid, sulfuric acid, nitric acid, phosphoric acid, maleic acid, acetic acid, salicylic acid, citric acid, formic acid, propionic acid. Diacid, succinic acid, etc. Furthermore, pharmaceutically acceptable salts may be prepared as alkali metal salts or alkaline earth metal salts, such as sodium, potassium or calcium salts.
本發明方法的一些實施方案包括將一種或更多種黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑直接施用於組織。在一些實施方案中,施用化合物的組織是其中存在或可能出現黃嘌呤脫氫酶(XDH)相關疾病或病症的組織,其非限制性實例是肝臟或腎臟。直接組織給藥可以通過直接注射或其他方式實現。許多口服遞送的化合物自然進入並通過肝臟和腎臟,本發明的治療方法的一些實施方案包括向對象口服施用一種或更多種黃嘌呤脫氫酶(XDH) dsRNA試劑。黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑,單獨或與其他治療劑聯合,可以施用一次,或者它們可以多次施用。如果多次給藥,黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑可以通過不同途徑給藥。例如,雖然不打算限制,第一次(或前幾次)給藥可以通過皮下方式進行,並且一次或更多次額外給藥可以是口服和/或全身給藥。Some embodiments of the methods of the invention include administering one or more xanthine dehydrogenase (XDH) dsRNA reagents or xanthine dehydrogenase (XDH) antisense polynucleotide reagents directly to the tissue. In some embodiments, the tissue to which the compound is administered is a tissue in which a xanthine dehydrogenase (XDH)-related disease or disorder is present or likely to occur, non-limiting examples of which are the liver or kidneys. Direct tissue drug delivery can be achieved by direct injection or other means. Many orally delivered compounds naturally enter and pass through the liver and kidneys, and some embodiments of the treatment methods of the present invention include orally administering to a subject one or more xanthine dehydrogenase (XDH) dsRNA agents. The xanthine dehydrogenase (XDH) dsRNA agent or the xanthine dehydrogenase (XDH) antisense polynucleotide agent, alone or in combination with other therapeutic agents, can be administered once, or they can be administered multiple times. If administered multiple times, the xanthine dehydrogenase (XDH) dsRNA agent or the xanthine dehydrogenase (XDH) antisense polynucleotide agent can be administered by different routes. For example, although not intended to be limiting, the first (or first several) administrations may be administered subcutaneously, and one or more additional administrations may be oral and/or systemic.
對於其中希望全身性施用黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑的本發明實施方案,可以配製黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑用於通過注射例如通過推注或連續輸注腸胃外施用。注射製劑可以以單位劑型存在,例如安瓿或多劑量容器,其添加或不添加防腐劑。黃嘌呤脫氫酶(XDH) dsRNA試劑製劑(也稱為藥物組合物)可採用油性或水性載體中的混懸液、溶液或乳液等形式,並且可含有配製劑,例如混懸劑、穩定劑和/或分散劑。For embodiments of the invention in which it is desired to systemically administer a xanthine dehydrogenase (XDH) dsRNA reagent or a xanthine dehydrogenase (XDH) antisense polynucleotide agent, a xanthine dehydrogenase (XDH) dsRNA reagent or Xanthine dehydrogenase (XDH) antisense polynucleotide agents are intended for parenteral administration by injection, such as by bolus injection or continuous infusion. Injectable preparations may be presented in unit dosage form such as ampoules or multi-dose containers, with or without added preservatives. Xanthine Dehydrogenase (XDH) dsRNA reagent preparations (also known as pharmaceutical compositions) may take the form of suspensions, solutions, or emulsions in oily or aqueous vehicles, and may contain formulating agents such as suspending agents, stabilizers and/or dispersants.
腸胃外給藥的製劑包括無菌水溶液或非水溶液、混懸液和乳液。非水溶劑的例子是丙二醇、聚乙二醇、植物油如橄欖油和可注射的有機酯如油酸乙酯。水性載體包括水、酒精/水溶液、乳液或混懸液,包括鹽水和緩衝介質。腸胃外載體包括氯化鈉溶液、林格氏葡萄糖溶液、葡萄糖和氯化鈉溶液、乳酸林格氏液或固定油。靜脈內賦形劑包括流體和營養補充劑、電解質補充劑(例如基於林格氏葡萄糖溶液的那些)等。也可以存在防腐劑和其他添加劑,例如抗微生物劑、抗氧化劑、螯合劑和惰性氣體等。其他形式的給藥,例如靜脈給藥,將導致較低的劑量。如果對象在初始劑量下的反應不足,則可以在患者耐受性允許的範圍內採用更高的劑量(或通過不同的、更局部的遞送途徑有效地提高劑量)。可以根據需要每天使用多次劑量以實現一種或更多種黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑的適當全身或局部水平,並實現黃嘌呤脫氫酶(XDH)活性的適當降低。Formulations for parenteral administration include sterile aqueous or non-aqueous solutions, suspensions and emulsions. Examples of non-aqueous solvents are propylene glycol, polyethylene glycol, vegetable oils such as olive oil, and injectable organic esters such as ethyl oleate. Aqueous carriers include water, alcoholic/aqueous solutions, emulsions or suspensions, including saline and buffered media. Parenteral vehicles include sodium chloride solution, Ringer's dextrose solution, dextrose and sodium chloride solution, lactated Ringer's solution, or fixed oils. Intravenous excipients include fluid and nutritional supplements, electrolyte supplements (such as those based on Ringer's dextrose solution), and the like. Preservatives and other additives such as antimicrobials, antioxidants, chelating agents, inert gases, etc. may also be present. Other forms of administration, such as intravenous administration, will result in lower doses. If the subject's response at the initial dose is inadequate, a higher dose may be administered (or the dose may be effectively increased via a different, more local delivery route) as tolerated by the patient. Multiple daily doses may be used as needed to achieve appropriate systemic or local levels of one or more xanthine dehydrogenase (XDH) dsRNA reagents or xanthine dehydrogenase (XDH) antisense polynucleotide reagents and to achieve xanthine dehydrogenase (XDH) antisense polynucleotide reagents. Appropriate reduction in purine dehydrogenase (XDH) activity.
在其他實施方案中,本發明的方法包括使用遞送載體,例如生物相容性微粒、納米顆粒或適合植入受體例如對象的植入物。PCT公開WO 95/24929(通過引用並入本文)中描述了可根據該方法使用的示例性可生物降解植入物,其描述了用於包含生物大分子的生物相容的、可生物降解的聚合物基質。In other embodiments, the methods of the present invention include the use of a delivery vehicle, such as a biocompatible microparticle, nanoparticle, or implant suitable for implantation in a recipient, such as a subject. Exemplary biodegradable implants that may be used according to this method are described in PCT Publication WO 95/24929 (incorporated herein by reference), which describes biocompatible, biodegradable implants containing biological macromolecules. Polymer matrix.
不可生物降解的和可生物降解的聚合物基質都可用於本發明的方法中,以將一種或更多種黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑遞送給對象。在一些實施方案中,基質可以是可生物降解的。基質聚合物可以是天然或合成聚合物。可以基於期望釋放的時間段來選擇聚合物,通常在幾小時到一年或更長時間的數量級。通常,可以使用在幾小時到三到十二個月之間的一段時間內的釋放。聚合物任選地呈水凝膠形式,其可以吸收高達其重量約90%的水,並且還任選地與多價離子或其他聚合物交聯。Both non-biodegradable and biodegradable polymeric matrices can be used in the methods of the present invention to incorporate one or more xanthine dehydrogenase (XDH) dsRNA reagents or xanthine dehydrogenase (XDH) antisense polynuclear The glycoside reagent is delivered to the subject. In some embodiments, the matrix can be biodegradable. Matrix polymers can be natural or synthetic polymers. The polymer can be selected based on the period of time for which release is desired, typically on the order of a few hours to a year or more. Typically, releases for periods ranging from a few hours to three to twelve months are available. The polymer is optionally in the form of a hydrogel, which can absorb up to about 90% of its weight in water, and is optionally also cross-linked with multivalent ions or other polymers.
通常,黃嘌呤脫氫酶(XDH)dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑在本發明的一些實施方案中可以使用可生物降解的植入物通過擴散或通過聚合物基質的降解來遞送。用於這種用途的示例性合成聚合物是本領域公知的。使用本領域已知的方法,可生物降解的聚合物和不可生物降解的聚合物可用於遞送黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑。生物黏附聚合物如可生物侵蝕的水凝膠(H. S. Sawhney, C. P. Pathak and J. A. Hubell in Macromolecules, 1993, 26, 581-587)也可用於遞送黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑,以治療黃嘌呤脫氫酶(XDH)相關疾病或病症。其他合適的遞送系統可以包括定時釋放、延遲釋放或持續釋放遞送系統。此類系統可避免重複施用黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸劑,從而提高對象和醫療保健專業人員的便利性。許多類型的釋放遞送系統是可用的並且是本領域普通技術人員已知的。見例如美國專利No. 5,075,109、4,452,775、4,675,189、5,736,152、3,854,480、5,133,974和5,407,686。此外,可以使用基於泵的硬件輸送系統,其中一些也適用於植入。Typically, xanthine dehydrogenase (XDH) dsRNA reagents or xanthine dehydrogenase (XDH) antisense polynucleotide reagents may be used in some embodiments of the invention via diffusion or through polymers using biodegradable implants. delivery through degradation of the matrix. Exemplary synthetic polymers for this purpose are well known in the art. Biodegradable polymers and non-biodegradable polymers can be used to deliver xanthine dehydrogenase (XDH) dsRNA reagents or xanthine dehydrogenase (XDH) antisense polynucleotide reagents using methods known in the art. Bioadhesive polymers such as bioerodible hydrogels (H. S. Sawhney, C. P. Pathak and J. A. Hubell in Macromolecules, 1993, 26, 581-587) can also be used to deliver xanthine dehydrogenase (XDH) dsRNA reagents or xanthine dehydrogenase Hydrogenase (XDH) antisense polynucleotide reagents for the treatment of xanthine dehydrogenase (XDH)-related diseases or conditions. Other suitable delivery systems may include timed release, delayed release, or sustained release delivery systems. Such systems improve convenience for subjects and healthcare professionals by eliminating the need for repeated administration of xanthine dehydrogenase (XDH) dsRNA reagents or xanthine dehydrogenase (XDH) antisense polynucleotide agents. Many types of release delivery systems are available and known to those of ordinary skill in the art. See, for example, U.S. Patent Nos. 5,075,109, 4,452,775, 4,675,189, 5,736,152, 3,854,480, 5,133,974, and 5,407,686. Additionally, pump-based hardware delivery systems are available, some of which are also suitable for implantation.
長期持續釋放植入物的使用可以適用於對象的預防性治療和具有發生復發性黃嘌呤脫氫酶(XDH)相關疾病或病症的風險的對象。如本文所用,長期釋放是指將植入物構建和布置成以至少長達10天、20天、30天、60天、90天、六個月、一年或更長時間遞送治療水平的黃嘌呤脫氫酶(XDH) dsRNA 試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑。長期持續釋放植入物是本領域普通技術人員衆所公知的並且包括上述的一些釋放系統。The use of long-term sustained release implants may be suitable for prophylactic treatment of subjects and subjects at risk of developing recurrent xanthine dehydrogenase (XDH)-related diseases or conditions. As used herein, long-term release refers to implants constructed and arranged to deliver therapeutic levels of yellow for at least up to 10 days, 20 days, 30 days, 60 days, 90 days, six months, one year, or longer. Purine Dehydrogenase (XDH) dsRNA Reagent or Xanthine Dehydrogenase (XDH) Antisense Polynucleotide Reagent. Long-term sustained release implants are well known to those of ordinary skill in the art and include some of the release systems described above.
黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑的治療製劑可以通過將具有所需純度的分子或化合物與任選的藥學上可接受的載體、賦形劑或穩定劑[Remington's Pharmaceutical Sciences 21st edition, (2006)]以凍乾製劑或水溶液的形式混合來製備用於儲存。可接受的載體、賦形劑或穩定劑在所採用的劑量和濃度下對接受者是無毒的,並且包括緩衝劑,例如磷酸鹽、檸檬酸鹽和其他有機酸;抗氧化劑,包括抗壞血酸和蛋氨酸;防腐劑(例如十八烷基二甲基苄基氯化銨;六甲銨氯化物;苯扎氯銨、苄索氯銨;苯酚、丁醇或苯甲醇;對羥基苯甲酸酯類,例如對羥基苯甲酸甲酯或丙酯;鄰苯二酚;間苯二酚;環己醇;3-戊醇;和間甲酚);低分子量(少於約 10 個殘基)多肽;蛋白質,例如血清白蛋白、明膠或免疫球蛋白;親水性聚合物,如聚乙烯吡咯烷酮;氨基酸,例如甘氨酸、穀氨醯胺、天冬醯胺、組氨酸、精氨酸或賴氨酸;單糖、二糖和其他碳水化合物,包括葡萄糖、甘露糖或糊精;螯合劑如EDTA;蔗糖、甘露糖醇、海藻糖或山梨糖醇等糖類;形成鹽的反離子,如鈉;金屬配合物(例如,鋅-蛋白質配合物);和/或非離子表面活性劑,例如TWEEN®、PLURONICS®或聚乙二醇 (PEG)。 細胞、對象和對照 Therapeutic formulations of xanthine dehydrogenase (XDH) dsRNA reagents or xanthine dehydrogenase (XDH) antisense polynucleotide reagents can be obtained by combining the molecule or compound with the desired purity and optionally a pharmaceutically acceptable carrier, Excipients or stabilizers [Remington's Pharmaceutical Sciences 21st edition, (2006)] are prepared for storage by mixing in a lyophilized formulation or aqueous solution. Acceptable carriers, excipients or stabilizers are non-toxic to the recipient at the doses and concentrations employed and include buffering agents such as phosphates, citrates and other organic acids; antioxidants including ascorbic acid and methionine ; Preservatives (e.g. stearyldimethylbenzyl ammonium chloride; hexamethylammonium chloride; benzalkonium chloride, benzethonium chloride; phenol, butanol or benzyl alcohol; parabens, e.g. Methyl or propyl hydroxybenzoate; catechol; resorcinol; cyclohexanol; 3-pentanol; and m-cresol); low molecular weight (less than about 10 residues) peptides; proteins, e.g. Serum albumin, gelatin or immunoglobulins; hydrophilic polymers such as polyvinylpyrrolidone; amino acids such as glycine, glutamine, asparagine, histidine, arginine or lysine; simple sugars, Disaccharides and other carbohydrates, including glucose, mannose or dextrin; chelating agents such as EDTA; sugars such as sucrose, mannitol, trehalose or sorbitol; salt-forming counterions such as sodium; metal complexes (e.g. , zinc-protein complexes); and/or non-ionic surfactants such as TWEEN®, PLURONICS® or polyethylene glycol (PEG). cells, objects and controls
本發明的方法可以與細胞、組織、器官和/或對象結合使用。在本發明的一些方面,對象是人或脊椎動物哺乳動物,包括但不限於狗、猫、馬、牛、山羊、小鼠、大鼠和靈長類動物,例如猴。因此,本發明可用於治療人和非人對象的黃嘌呤脫氫酶(XDH)相關疾病或病症。在本發明的一些方面,對象可以是農場動物、動物園動物、馴養動物或非馴養動物,並且本發明的方法可用於獸醫預防和治療方案。在本發明的一些實施方案中,對象是人並且本發明的方法可用於人預防和治療方案。The methods of the invention can be used in conjunction with cells, tissues, organs and/or subjects. In some aspects of the invention, the subject is a human or vertebrate mammal, including but not limited to dogs, cats, horses, cattle, goats, mice, rats, and primates, such as monkeys. Accordingly, the present invention may be used to treat xanthine dehydrogenase (XDH)-related diseases or conditions in humans and non-human subjects. In some aspects of the invention, the subject may be a farm animal, a zoo animal, a domesticated animal, or a non-domesticated animal, and the methods of the invention may be used in veterinary preventive and therapeutic regimens. In some embodiments of the invention, the subject is a human and the methods of the invention can be used in human prophylactic and therapeutic regimens.
可應用本發明的對象的非限制性實例是被診斷患有、懷疑患有或有風險患有與以下疾病或病症相關的疾病或病症的對象:高於期望的黃嘌呤脫氫酶(XDH)表達和/或活性,也稱為“升高的黃嘌呤脫氫酶(XDH)表達水平”。與高於期望水平的黃嘌呤脫氫酶(XDH)表達和/或活性相關的疾病和病症的非限制性實例在本文別處描述。本發明的方法可應用於在治療時已被診斷為患有該疾病或病症的對象、與高於期望的黃嘌呤脫氫酶(XDH) 表達和/或活性相關的對象,或被認為處於患有或發展與高於期望的黃嘌呤脫氫酶(XDH) 表達和/或活性相關的疾病或病症的風險中的對象。在本發明的一些方面,與高於期望的黃嘌呤脫氫酶(XDH)表達和/或活性水平相關的疾病或病症是急性疾病或病症;在本發明的某些方面,與高於期望的黃嘌呤脫氫酶(XDH)表達和/或活性水平相關的疾病或病症是慢性疾病或病症。Non-limiting examples of subjects to which the present invention may be applied are subjects diagnosed with, suspected of having, or at risk of having a disease or condition associated with: Greater than desired xanthine dehydrogenase (XDH) expression and/or activity, also known as "elevated xanthine dehydrogenase (XDH) expression levels." Non-limiting examples of diseases and conditions associated with higher than desired levels of xanthine dehydrogenase (XDH) expression and/or activity are described elsewhere herein. The methods of the present invention may be applied to subjects who have been diagnosed with the disease or condition at the time of treatment, are associated with higher than expected xanthine dehydrogenase (XDH) expression and/or activity, or are thought to be suffering from the disease or condition. or a subject at risk of developing a disease or condition associated with higher than expected xanthine dehydrogenase (XDH) expression and/or activity. In some aspects of the invention, the disease or condition associated with higher than desired xanthine dehydrogenase (XDH) expression and/or activity levels is an acute disease or condition; Diseases or conditions associated with xanthine dehydrogenase (XDH) expression and/or activity levels are chronic diseases or conditions.
在一個非限制性實例中,將本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑施用於被診斷患有XDH相關疾病,包括但是不局限於:高尿酸血症、痛風、NAFLD、NASH、代謝紊亂、胰島素抵抗、心血管疾病、2型糖尿病、Lesch Nyhan症候群、肝醣儲積症(GSD),例如I型GSD以及與氧化應激有關的疾病,例如慢性低度炎症;或其他XDH相關疾病。本發明的方法可應用於在治療時已被診斷為患有該疾病或病症的對象,或被認為有患或發展該疾病或病症的風險的對象。In a non-limiting example, the xanthine dehydrogenase (XDH) dsRNA reagent of the invention is administered to patients diagnosed with XDH-related diseases, including but not limited to: hyperuricemia, gout, NAFLD, NASH, metabolic disorders, insulin resistance, cardiovascular disease, type 2 diabetes, Lesch Nyhan syndrome, glycogen storage disorders (GSD), such as GSD type I, and diseases related to oxidative stress, such as chronic low-grade inflammation; or other XDH-related diseases. The methods of the present invention may be applied to subjects who, at the time of treatment, have been diagnosed as having the disease or condition, or who are considered to be at risk of developing or developing the disease or condition.
在另一個非限制性實例中,將本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑施用以治療指因黃嘌呤脫氫酶(XDH)被激活導致或與其相關的疾病或障礙,或其症狀或進展響應於黃嘌呤脫氫酶(XDH)失活的疾病或障礙。術語“黃嘌呤脫氫酶(XDH)相關疾病”包括因黃嘌呤脫氫酶(XDH)表達降低而受益的疾病、障礙或病症。這類疾病包括但是不局限於:高尿酸血症、痛風、NAFLD、NASH、代謝紊亂、胰島素抵抗、心血管疾病、2型糖尿病、Lesch Nyhan症候群、肝醣儲積症(GSD),例如I型GSD以及與氧化應激有關的疾病,例如慢性低度炎症;或其他XDH相關疾病。In another non-limiting example, a xanthine dehydrogenase (XDH) dsRNA agent of the invention is administered to treat a disease or disorder caused by or associated with activation of xanthine dehydrogenase (XDH), or a symptom thereof or a disease or disorder that progresses in response to inactivation of xanthine dehydrogenase (XDH). The term "xanthine dehydrogenase (XDH)-related disease" includes diseases, disorders, or conditions that benefit from reduced expression of xanthine dehydrogenase (XDH). Such diseases include, but are not limited to: hyperuricemia, gout, NAFLD, NASH, metabolic disorders, insulin resistance, cardiovascular disease, type 2 diabetes, Lesch Nyhan syndrome, glycogen storage disorders (GSD), such as GSD type I and diseases related to oxidative stress, such as chronic low-grade inflammation; or other XDH-related diseases.
可應用本發明方法的細胞包括體外、體內、離體細胞。細胞可以在對象中、在培養物中和/或混懸液中,或處於任何其他合適的狀態或條件中。可以應用本發明的方法的細胞可以是:肝臟細胞(liver cell)、肝細胞(hepatocyte)、心臟細胞、胰腺細胞、心血管細胞、腎細胞或其他類型的脊椎動物細胞,包括人和非人哺乳動物細胞。在本發明的某些方面,可應用本發明方法的細胞是健康的正常細胞,其未知為疾病細胞。在本發明的某些實施方案中,將本發明的方法和組合物應用於肝臟細胞、肝細胞、心臟細胞、胰腺細胞、心血管細胞和/或腎細胞的細胞。在本發明的某些方面,對照細胞是正常細胞,但應當理解,具有疾病或病症的細胞也可以在特定情况下用作對照細胞,例如在比較具有疾病或病症的經處理細胞與具有疾病或病症的未處理細胞的結果等的情况下。Cells to which the method of the present invention can be applied include in vitro, in vivo, and ex vivo cells. The cells may be in a subject, in culture and/or in suspension, or in any other suitable state or condition. The cells to which the method of the present invention can be applied may be: liver cells, hepatocytes, heart cells, pancreatic cells, cardiovascular cells, kidney cells or other types of vertebrate cells, including human and non-human mammalian cells. animal cells. In certain aspects of the invention, cells to which the methods of the invention can be applied are healthy normal cells that are not known to be disease cells. In certain embodiments of the invention, the methods and compositions of the invention are applied to cells of the liver, hepatocytes, heart cells, pancreatic cells, cardiovascular cells, and/or renal cells. In certain aspects of the invention, control cells are normal cells, but it should be understood that cells having a disease or disorder may also be used as control cells in certain circumstances, such as when comparing treated cells having a disease or disorder to cells having a disease or disorder. In the case of other diseases that result from untreated cells.
根據本發明的方法,可以確定黃嘌呤脫氫酶(XDH)多肽活性的水平並將其與黃嘌呤脫氫酶(XDH)多肽活性的對照水平進行比較。對照可以是預定值,其可以採取多種形式。它可以是單個截止值,例如中位數或平均值。它可以基於比較組來建立,例如在具有正常水平的黃嘌呤脫氫酶(XDH)多肽和/或黃嘌呤脫氫酶(XDH)多肽活性的組和具有增加的黃嘌呤脫氫酶(XDH)多肽和/或黃嘌呤脫氫酶(XDH)多肽活性水平的組中。比較組的另一個非限制性實例可以是具有黃嘌呤脫氫酶(XDH)相關疾病或病症的一種或更多種症狀或診斷的群體與沒有疾病或病症的一種或更多種症狀或診斷的群體;已對其施用本發明的siRNA治療的對象組與未對其施用本發明的siRNA治療的對象組。通常,對照可以基於適當年齡組中的明顯健康的正常個體或明顯健康的細胞。應當理解,除了預定值之外,根據本發明的對照可以是與實驗材料平行測試的材料樣品。示例包括來自對照群體的樣品或通過製造產生的對照樣品,以用於與實驗樣品進行平行測試。在本發明的一些實施方案中,對照可包括未用本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑接觸或處理的細胞或對象,在這種情况下,可以比較黃嘌呤脫氫酶(XDH)多肽和/或黃嘌呤脫氫酶(XDH)多肽活性的對照水平以及與本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑接觸的細胞或對象中黃嘌呤脫氫酶(XDH)多肽和/或黃嘌呤脫氫酶(XDH)多肽活性的水平。According to the methods of the present invention, the level of xanthine dehydrogenase (XDH) polypeptide activity can be determined and compared to a control level of xanthine dehydrogenase (XDH) polypeptide activity. The control can be a predetermined value, which can take many forms. It can be a single cutoff value, such as the median or mean. It can be established based on comparing groups, for example in a group with normal levels of xanthine dehydrogenase (XDH) polypeptide and/or xanthine dehydrogenase (XDH) polypeptide activity and with increased xanthine dehydrogenase (XDH) peptide and/or xanthine dehydrogenase (XDH) peptide activity levels in the group. Another non-limiting example of a comparison group may be a population with one or more symptoms or diagnosis of a xanthine dehydrogenase (XDH)-related disease or disorder versus a population without one or more symptoms or diagnosis of the disease or disorder. Population; a subject group to which the siRNA treatment of the present invention has been administered and a subject group to which the siRNA treatment of the present invention has not been administered. Typically, controls can be based on apparently healthy normal individuals or apparently healthy cells in an appropriate age group. It will be understood that, in addition to predetermined values, a control according to the present invention may be a material sample tested in parallel with the experimental material. Examples include samples from control populations or control samples generated through manufacturing for parallel testing with experimental samples. In some embodiments of the invention, controls may include cells or subjects that have not been contacted or treated with the xanthine dehydrogenase (XDH) dsRNA reagents of the invention, in which case the xanthine dehydrogenase (XDH) dsRNA reagents of the invention may be compared. ) polypeptide and/or xanthine dehydrogenase (XDH) polypeptide activity control levels and contact with the xanthine dehydrogenase (XDH) dsRNA reagent or xanthine dehydrogenase (XDH) antisense polynucleotide reagent of the invention The level of xanthine dehydrogenase (XDH) polypeptide and/or xanthine dehydrogenase (XDH) polypeptide activity in a cell or subject.
在本發明的一些實施方案中,對照水平可以是為對象確定的黃嘌呤脫氫酶(XDH)多肽水平,其中將在不同時間為同一對象確定的黃嘌呤脫氫酶(XDH)多肽水平與該對照水平進行比較。在一個非限制性實例中,在從未接受過本發明的黃嘌呤脫氫酶(XDH)治療的對象獲得的生物樣品中確定黃嘌呤脫氫酶(XDH)的水平。在一些實施方案中,生物樣品是血清樣品。從對象獲得的樣品中測定的尿酸水平可作為對象的基線或對照值。在本發明的治療方法中向對象施用一次或更多次黃嘌呤脫氫酶(XDH) dsRNA試劑之後,可以從對象獲得一個或更多個另外的血清樣品,並且可以將隨後的一個或更多個樣品中的尿酸水平與對象的對照/基線水平進行比較。此類比較可用於評估對象中黃嘌呤脫氫酶(XDH)相關疾病或病症的發作、進展或消退。例如,從對象獲得的基線樣品中黃嘌呤脫氫酶(XDH)多肽的水平高於在給予對象本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑後從同一對象獲得的水平,則表示黃嘌呤脫氫酶(XDH)相關疾病或病症的消退並且表示施用的本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑治療黃嘌呤脫氫酶(XDH)相關疾病或病症產生的功效。In some embodiments of the invention, the control level may be a xanthine dehydrogenase (XDH) polypeptide level determined for a subject, wherein a xanthine dehydrogenase (XDH) polypeptide level determined for the same subject at a different time is compared with the Compare to control levels. In one non-limiting example, xanthine dehydrogenase (XDH) levels are determined in biological samples obtained from subjects who have not received xanthine dehydrogenase (XDH) treatment of the present invention. In some embodiments, the biological sample is a serum sample. The uric acid level measured in the sample obtained from the subject may serve as the subject's baseline or control value. After one or more administrations of a xanthine dehydrogenase (XDH) dsRNA agent to a subject in a treatment method of the invention, one or more additional serum samples can be obtained from the subject, and the subsequent one or more The uric acid levels in each sample are compared to the subject's control/baseline levels. Such comparisons may be used to evaluate the onset, progression, or regression of xanthine dehydrogenase (XDH)-related diseases or conditions in a subject. For example, the level of a xanthine dehydrogenase (XDH) polypeptide in a baseline sample obtained from a subject is higher than when the subject is administered a Levels obtained from the same subject after a glycoside reagent are indicative of resolution of a xanthine dehydrogenase (XDH)-related disease or disorder and are indicative of administration of a xanthine dehydrogenase (XDH) dsRNA reagent of the invention to treat xanthine dehydrogenase (XDH) Efficacy caused by related diseases or conditions.
在本發明的某些方面,生物樣品是肝細胞樣品。為對象確定的黃嘌呤脫氫酶(XDH)多肽和/或黃嘌呤脫氫酶(XDH)多肽活性水平中的一個或更多個值可以作為對照值,並用於稍後在同一對象中比較黃嘌呤脫氫酶(XDH)多肽和/或黃嘌呤脫氫酶(XDH)活性水平,從而允許評估對象中“基線”黃嘌呤脫氫酶(XDH)多肽活性的變化。因此,將初始水平用作該對象的對照水平的情况下,初始黃嘌呤脫氫酶(XDH)多肽水平和/或初始黃嘌呤脫氫酶(XDH)多肽活性水平可以用於顯示和/或確定本發明的方法和化合物在對象中所能夠降低對象中黃嘌呤脫氫酶(XDH)多肽和/或黃嘌呤脫氫酶(XDH)多肽活性的水平。In certain aspects of the invention, the biological sample is a hepatocyte sample. One or more of the xanthine dehydrogenase (XDH) polypeptide and/or xanthine dehydrogenase (XDH) polypeptide activity levels determined for a subject can serve as a control value and be used to later compare xanthine dehydrogenase (XDH) polypeptide in the same subject. Purine dehydrogenase (XDH) polypeptide and/or xanthine dehydrogenase (XDH) activity levels, thereby allowing assessment of changes in "baseline" xanthine dehydrogenase (XDH) polypeptide activity in a subject. Therefore, the initial xanthine dehydrogenase (XDH) polypeptide level and/or the initial xanthine dehydrogenase (XDH) polypeptide activity level may be used to display and/or determine where the initial level is used as a control level for that subject. The methods and compounds of the present invention are capable of reducing the level of xanthine dehydrogenase (XDH) polypeptide and/or xanthine dehydrogenase (XDH) polypeptide activity in the subject.
使用本發明的方法,可以將本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑和/或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑施用於對象。這樣的dsRNAi試劑包括例如表1中所顯示的雙鏈體AV00206至AV00292。在一些實施方案中,優選的dsRNAi試劑包括例如雙鏈體AV00227、AV00260、AV00285、AV00266、AV00280、AV00238、AV00249、AV00289、AV00233、AV00225、AV00273或AV00283。在另一些實施方案中,優選的表2中dsRNAi試劑包括例如雙鏈體AV00227、AV00260、AV00285、AV00266或AV00280。在另一些實施方案中,優選的表3中dsRNAi試劑包括例如雙鏈體AD00353、AD00356、AD00358、AD00364、AD00365、AD00366、AD00368、AD00370、AD00430、AD00431、AD00521、AD00521-1、AD00364-1、AD00365-2、AD00366-1和AD00432-1。可以如下評估本發明的施用和治療的功效:與先前時間點從對象獲得的血清樣品中尿酸的給藥前水平相比,或與非接觸對照水平(例如對照血清樣品中的尿酸水平)相比,當施用和治療後,從對象獲得的血清樣品中尿酸的水平降低至少0.5%、1%、5%、10%、20%、30%、40%、50%、60%、70%、80 %、90%、95%或更多。應當理解,尿酸的水平與黃嘌呤脫氫酶(XDH)基因表達的水平相關。本發明方法的某些實施方案包括以有效抑制黃嘌呤脫氫酶(XDH)基因表達的量向對象施用本發明的黃嘌呤脫氫酶(XDH) dsRNA和/或黃嘌呤脫氫酶(XDH)反義試劑,從而降低對象中黃嘌呤脫氫酶(XDH)多肽的水平並降低黃嘌呤脫氫酶(XDH)多肽活性的水平。 在本發明的方法的一些實施方案中,細胞與本發明的siRNA試劑的接觸(在本文中也稱為處理)導致細胞中黃嘌呤脫氫酶(XDH)基因表達抑制至少約1%、2%、 3%、4%、5%、6%、7%、8%、9%、10%、11%、12%、13%、14%、15%、16%、17%、18%、19% , 20%, 21%, 22%, 23%, 24%, 25%, 26%, 27%, 28%, 29%, 30%, 31%, 32%, 33%, 34%, 35%, 36 %、37%、38%、39%、40%、41%、42%、43%、44%、45%、46%、47%、48%、49%、50%、51%、52%、53%、54%、55%、56%、57%、58%、59%、60%、61%、62%、63%、64%、65%、66%、67%、68%、69% , 70%, 71%, 72%, 73%, 74%, 75%, 76%, 77%, 78%, 79%, 80%, 81%, 82%, 83%, 84%, 85%, 86 %、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%、99% 或約 100%,例如,至低於化驗檢測水平。Using the methods of the invention, a xanthine dehydrogenase (XDH) dsRNA agent and/or a xanthine dehydrogenase (XDH) antisense polynucleotide agent of the invention can be administered to a subject. Such dsRNAi agents include, for example, duplexes AV00206 to AV00292 shown in Table 1. In some embodiments, preferred dsRNAi agents include, for example, duplexes AV00227, AV00260, AV00285, AV00266, AV00280, AV00238, AV00249, AV00289, AV00233, AV00225, AV00273, or AV00283. In other embodiments, preferred dsRNAi agents of Table 2 include, for example, duplexes AV00227, AV00260, AV00285, AV00266, or AV00280. In other embodiments, preferred dsRNAi agents in Table 3 include, for example, duplexes AD00353, AD00356, AD00358, AD00364, AD00365, AD00366, AD00368, AD00370, AD00430, AD00431, AD00521, AD00521-1, AD00364-1, AD00365 -2, AD00366-1 and AD00432-1. The efficacy of administration and treatment of the present invention may be assessed as compared to pre-dose levels of uric acid in serum samples obtained from the subject at previous time points, or compared to non-exposure control levels (e.g., uric acid levels in control serum samples) , when administered and treated, the level of uric acid in serum samples obtained from the subject is reduced by at least 0.5%, 1%, 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80 %, 90%, 95% or more. It should be understood that the level of uric acid is related to the level of xanthine dehydrogenase (XDH) gene expression. Certain embodiments of the methods of the invention include administering to the subject the xanthine dehydrogenase (XDH) dsRNA and/or xanthine dehydrogenase (XDH) of the invention in an amount effective to inhibit xanthine dehydrogenase (XDH) gene expression. An antisense agent, thereby reducing the level of xanthine dehydrogenase (XDH) polypeptide and reducing the level of xanthine dehydrogenase (XDH) polypeptide activity in a subject. In some embodiments of the methods of the invention, contacting a cell with an siRNA agent of the invention (also referred to herein as treatment) results in an inhibition of xanthine dehydrogenase (XDH) gene expression in the cell by at least about 1%, 2% , 3%, 4%, 5%, 6%, 7%, 8%, 9%, 10%, 11%, 12%, 13%, 14%, 15%, 16%, 17%, 18%, 19 %, 20%, 21%, 22%, 23%, 24%, 25%, 26%, 27%, 28%, 29%, 30%, 31%, 32%, 33%, 34%, 35%, 36%, 37%, 38%, 39%, 40%, 41%, 42%, 43%, 44%, 45%, 46%, 47%, 48%, 49%, 50%, 51%, 52% ,53%,54%,55%,56%,57%,58%,59%,60%,61%,62%,63%,64%,65%,66%,67%,68%,69 %, 70%, 71%, 72%, 73%, 74%, 75%, 76%, 77%, 78%, 79%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, 99% or about 100%, for example, to as low as At the level of laboratory testing.
本發明的一些實施方案包括從一個或更多個對象獲得的一個或更多個生物樣品中確定黃嘌呤脫氫酶(XDH)多肽的存在、不存在和/或量(本文也稱為水平)。該測定可用於評估本發明的治療方法的功效。例如,本發明的方法和組合物可用於確定生物樣品中黃嘌呤脫氫酶(XDH)多肽的水平,該生物樣品獲自先前用施用本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑和/或黃嘌呤脫氫酶(XDH)反義劑治療的對象。與先前時間點從對象獲得的肝細胞樣品中黃嘌呤脫氫酶(XDH)多肽的給藥前水平相比,或與非接觸對照水平(例如對照肝細胞樣品中的黃嘌呤脫氫酶(XDH)多肽水平)相比,當施用和治療後,從對象獲得的肝細胞樣品中黃嘌呤脫氫酶(XDH)多肽的水平降低至少0.5%、1%、5%、10%、20%、30%、40%、50%、60%、70%、80 %、90%、95%或更多,則表明給予對象的治療的功效水平。Some embodiments of the invention include determining the presence, absence, and/or amount (also referred to herein as levels) of a xanthine dehydrogenase (XDH) polypeptide in one or more biological samples obtained from one or more subjects. . This assay can be used to assess the efficacy of the treatment methods of the invention. For example, the methods and compositions of the invention can be used to determine the level of a xanthine dehydrogenase (XDH) polypeptide in a biological sample obtained previously using a xanthine dehydrogenase (XDH) dsRNA reagent of the invention and/or or subjects treated with xanthine dehydrogenase (XDH) antisense agents. Compare to predose levels of xanthine dehydrogenase (XDH) polypeptide in hepatocyte samples obtained from the subject at previous time points, or to non-exposure control levels (e.g., xanthine dehydrogenase (XDH) in control hepatocyte samples ) polypeptide levels), when administered and treated, the levels of xanthine dehydrogenase (XDH) polypeptides in hepatocyte samples obtained from the subject are reduced by at least 0.5%, 1%, 5%, 10%, 20%, 30 %, 40%, 50%, 60%, 70%, 80%, 90%, 95% or more indicates the level of efficacy of the treatment administered to the subject.
在本發明的一些實施方案中,針對對象確定的黃嘌呤脫氫酶(XDH)相關疾病或病症的生理特徵可以作為對照結果,並將同一對象在不同時間的生理特徵的確定結果與對照結果進行比較。在一個非限制性實例中,病理特徵尿酸水平測量自從未給予本發明的黃嘌呤脫氫酶(XDH)治療的對象,其可用作對象的基線或對照值。在本發明的治療方法中向對象施用一次或更多次黃嘌呤脫氫酶(XDH)dsRNA試劑之後,尿酸水平分別與對象的對照/基線水平進行比較。此類比較可用於評估對象中黃嘌呤脫氫酶(XDH)相關疾病或病症的發作、進展或消退。例如,從對象獲得的基線尿酸水平高於在對對象施用本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑後從同一對象測定的尿酸水平,則表示黃嘌呤脫氫酶(XDH)相關疾病或病症的消退並且表示施用的本發明的黃嘌呤脫氫酶(XDH) dsRNA試劑治療黃嘌呤脫氫酶(XDH)相關疾病或病症的功效。In some embodiments of the present invention, the physiological characteristics of xanthine dehydrogenase (XDH)-related diseases or conditions determined for a subject can be used as a control result, and the determination results of the physiological characteristics of the same subject at different times are compared with the control results. compare. In one non-limiting example, pathological characteristic uric acid levels are measured from subjects who have never been administered xanthine dehydrogenase (XDH) treatment of the present invention, which can be used as a baseline or control value for the subject. After one or more administrations of a xanthine dehydrogenase (XDH) dsRNA agent to a subject in a treatment method of the invention, uric acid levels are compared to the subject's control/baseline levels, respectively. Such comparisons may be used to evaluate the onset, progression, or regression of xanthine dehydrogenase (XDH)-related diseases or conditions in a subject. For example, a baseline uric acid level obtained from a subject is higher than uric acid measured from the same subject after administration of a xanthine dehydrogenase (XDH) dsRNA reagent or a xanthine dehydrogenase (XDH) antisense polynucleotide reagent of the invention to the subject level, it represents the regression of xanthine dehydrogenase (XDH)-related diseases or disorders and represents the efficacy of the administered xanthine dehydrogenase (XDH) dsRNA agent of the present invention in treating xanthine dehydrogenase (XDH)-related diseases or disorders. .
本發明的一些實施方案包括使用例如但不限於以下方法確定黃嘌呤脫氫酶(XDH)相關疾病或病症的生理特徵的存在、不存在和/或變化:(1) 測量對象的尿酸水平; (2)評估從一名或更多名對象獲得的一份或更多份生物樣品的生理特徵;(3) 或對對象進行身體檢查。該測定可用於評估本發明的治療方法的功效。 藥盒 Some embodiments of the invention include determining the presence, absence, and/or changes in physiological characteristics of xanthine dehydrogenase (XDH)-related diseases or conditions using methods such as, but not limited to: (1) measuring a subject's uric acid levels; 2) evaluate the physiological characteristics of one or more biological samples obtained from one or more subjects; (3) or perform a physical examination of the subject. This assay can be used to assess the efficacy of the treatment methods of the invention. pill box
包含一種或更多種黃嘌呤脫氫酶(XDH)dsRNA試劑和/或黃嘌呤脫氫酶(XDH)反義多核苷酸試劑及其在本發明方法中的使用說明的藥盒也在本發明的範圍內。本發明的藥盒可包含可用於治療黃嘌呤脫氫酶(XDH)相關疾病或病症的黃嘌呤脫氫酶(XDH)dsRNA試劑、黃嘌呤脫氫酶(XDH)正義多核苷酸和黃嘌呤脫氫酶(XDH)反義多核苷酸試劑中的一種或更多種。可以製備包含一種或更多種黃嘌呤脫氫酶(XDH) dsRNA試劑、黃嘌呤脫氫酶(XDH)正義多核苷酸和黃嘌呤脫氫酶(XDH)反義多核苷酸試劑的藥盒以用於本發明的治療方法。本發明藥盒的組分可以以水性介質或凍乾形式包裝。本發明的藥盒可以包含被分隔開以在其中封閉地收納一個或更多個容器裝置或一系列容器裝置(例如試管、小瓶、燒瓶、瓶子、注射器等)的載體。第一容器裝置或一系列容器裝置可包含一種或更多種化合物,例如黃嘌呤脫氫酶(XDH) dsRNA試劑和/或黃嘌呤脫氫酶(XDH)正義或反義多核苷酸試劑。第二容器裝置或一系列容器裝置可包含靶向劑、標記劑、遞送劑等,其可作為在本發明的治療方法的實施方案中施用的黃嘌呤脫氫酶(XDH)dsRNA試劑和/或黃嘌呤脫氫酶(XDH)反義多核苷酸的一部分包括在內。Kits containing one or more xanthine dehydrogenase (XDH) dsRNA reagents and/or xanthine dehydrogenase (XDH) antisense polynucleotide reagents and instructions for their use in the methods of the invention are also subject to the invention. within the range. The kit of the present invention may include a xanthine dehydrogenase (XDH) dsRNA reagent useful for treating xanthine dehydrogenase (XDH)-related diseases or disorders, a xanthine dehydrogenase (XDH) sense polynucleotide and a xanthine dehydrogenase One or more of the hydrogenase (XDH) antisense polynucleotide reagents. Kits containing one or more xanthine dehydrogenase (XDH) dsRNA reagents, xanthine dehydrogenase (XDH) sense polynucleotide, and xanthine dehydrogenase (XDH) antisense polynucleotide reagents can be prepared to For use in the treatment methods of the present invention. The components of the kit of the invention may be packaged in an aqueous medium or in lyophilized form. Kits of the present invention may comprise a carrier divided to receive therein one or more container means or a series of container means (eg test tubes, vials, flasks, bottles, syringes, etc.). The first container device or series of container devices may contain one or more compounds, such as a xanthine dehydrogenase (XDH) dsRNA reagent and/or a xanthine dehydrogenase (XDH) sense or antisense polynucleotide reagent. The second container device or series of container devices may contain targeting agents, labeling agents, delivery agents, etc., which may serve as xanthine dehydrogenase (XDH) dsRNA agents and/or administered in embodiments of the treatment methods of the invention. A portion of the xanthine dehydrogenase (XDH) antisense polynucleotide is included.
本發明的藥盒還可包含說明書。說明書通常採用書面形式,並且將為執行由藥盒體現的治療和基於該治療做出决定提供指導。The kit of the present invention may also contain instructions. Instructions are usually in written form and will provide guidance for performing the treatment embodied by the kit and for making decisions based on that treatment.
提供以下實施例以說明本發明實踐的具體實例,其並不旨在限制本發明的範圍。對本領域普通技術人員來說明顯的是,本發明可應用於多種組合物和方法。 實施例 實施例 1.RNAi 試劑的合成 The following examples are provided to illustrate specific examples of the practice of the invention and are not intended to limit the scope of the invention. It will be apparent to one of ordinary skill in the art that the present invention is applicable to a variety of compositions and methods. EXAMPLES Example 1. Synthesis of RNAi reagents
上表 1-3 中所示的黃嘌呤脫氫酶(XDH)基因RNAi 試劑雙鏈體是根據以下通用程序合成的:The xanthine dehydrogenase (XDH) gene RNAi reagent duplexes shown in Table 1-3 above were synthesized according to the following general procedure:
使用基於亞磷醯胺化學的成熟固相合成方法,在寡核苷酸合成儀上合成siRNA的正義和反義鏈序列。寡核苷酸鏈的增長是通過4步循環實現的:去保護、縮合、加帽和用於添加每個核苷酸的氧化或硫化步驟。合成是在由可控多孔玻璃(CPG, 1000 Å)製成的固體支持物上進行的。單體亞磷醯胺購自商業來源。根據本文實施例2-3的程序合成具有GalNAc配體簇的亞磷醯胺(GLPA1、GLPA2和GLPA15作為非限制性實例)。對於用於體外篩選的 siRNA(表2),合成是在2 μmol 規模下進行的;對於用於體內測試的 siRNA(表3),合成規模為5 μmol 或更大。在GalNAc配體(作為非限制性實例的GLO-n)連接在正義鏈的3'-末端的情况下,使用連接有GalNAc配體的CPG固體支持物。在GalNAc配體(GLS-1或GLS-2作為非限制性實例)連接在正義鏈的5'-末端的情况下,將GalNAc亞磷醯胺(GLPA1或GLPA2作為非限制性實例)用於最後的偶聯反應。將3%二氯甲烷中的三氯乙酸(TCA)用於4,4'-二甲氧基三苯甲基保護基 (DMT)的脫保護。5-乙硫基-1H-四唑用作活化劑。THF/Py/H 2O中的I 2和吡啶/MeCN中的苯乙醯二硫化物(PADS)分別用於氧化和硫化反應。在最後的固相合成步驟之後,通過用1:1體積的20wt%甲胺水溶液和28%氫氧化銨溶液處理來切割固體載體結合的低聚物並去除保護基團。為了合成用於體外篩選的siRNA,將粗混合物濃縮。將剩餘的固體溶解在1.0 M NaOAc中,加入冰冷的EtOH以沉澱出作為鈉鹽的單鏈產物,其無需進一步純化即可用於退火。為了合成用於體內測試的siRNA,粗單鏈產物通過離子對反相HPLC(IP-RP-HPLC)進一步純化。通過將來自IP-RP-HPLC的純化單鏈寡核苷酸產物溶解在1.0 M NaOAc中並通過添加冰冷的 EtOH 進行沉澱,將其轉化為鈉鹽。在水中通過等摩爾互補進行正義鏈和反義鏈寡核苷酸的退火,以形成雙鏈siRNA產物,將其凍乾以提供蓬鬆的白色固體。 實施例 2. 中間體 -A 和中間體 -B 的製備 siRNA sense and antisense strand sequences are synthesized on an oligonucleotide synthesizer using a well-established solid-phase synthesis method based on phosphoramidite chemistry. Oligonucleotide chain growth is achieved through a 4-step cycle: deprotection, condensation, capping, and an oxidation or sulfation step for the addition of each nucleotide. The synthesis was performed on a solid support made of controlled porous glass (CPG, 1000 Å). Monomeric phosphoramidite was purchased from commercial sources. Phosphoramidites with GalNAc ligand clusters (GLPA1, GLPA2, and GLPA15 as non-limiting examples) were synthesized according to the procedures of Examples 2-3 herein. For siRNA for in vitro screening (Table 2), synthesis was performed at a 2 μmol scale; for siRNA for in vivo testing (Table 3), synthesis was performed at a scale of 5 μmol or larger. In the case where a GalNAc ligand (GLO-n as a non-limiting example) is attached to the 3'-end of the sense strand, a CPG solid support to which the GalNAc ligand is attached is used. In the case where a GalNAc ligand (GLPA1 or GLS-2 as a non-limiting example) is attached to the 5'-end of the sense strand, a GalNAc phosphoramidite (GLPA1 or GLPA2 as a non-limiting example) is used at the end coupling reaction. Trichloroacetic acid (TCA) in 3% dichloromethane was used for deprotection of the 4,4'-dimethoxytrityl protecting group (DMT). 5-Ethylthio-1H-tetrazole was used as the activator. I in THF/Py/H 2 O and phenylacetyl disulfide (PADS) in pyridine / MeCN were used for the oxidation and sulfidation reactions, respectively. After the final solid-phase synthesis step, the solid support-bound oligomers were cleaved and protecting groups were removed by treatment with a 1:1 volume of 20 wt% aqueous methylamine and 28% ammonium hydroxide solution. To synthesize siRNA for in vitro screening, the crude mixture was concentrated. The remaining solid was dissolved in 1.0 M NaOAc and ice-cold EtOH was added to precipitate the single-chain product as a sodium salt, which was used for annealing without further purification. To synthesize siRNA for in vivo testing, the crude single-stranded product was further purified by ion pair reversed-phase HPLC (IP-RP-HPLC). Convert the purified single-stranded oligonucleotide product from IP-RP-HPLC to its sodium salt by dissolving it in 1.0 M NaOAc and precipitating it by adding ice-cold EtOH. Annealing of sense and antisense strand oligonucleotides is performed by equimolar complementation in water to form a double-stranded siRNA product, which is lyophilized to provide a fluffy white solid. Example 2. Preparation of Intermediate -A and Intermediate -B
如以下方案1所示,通過在二氯甲烷(DCM)中用三甲基甲矽烷基三氟甲磺酸酯(TMSOTf)處理市售的半乳糖胺五乙酸酯來合成中間體-A。然後用Cbz保護的2-(2-氨基乙氧基)乙-1-醇進行糖基化,得到化合物II。通過氫化除去Cbz保護基團以提供作為三氟乙酸鹽(TFA)鹽的中間體-A。除了使用Cbz保護的2-(2-(2-氨基乙氧基)乙氧基)乙-1-醇作為原料之外,中間體B基於相同的方案合成。 中間體-A 中間體-B 方案1 Intermediate-A was synthesized by treating commercially available galactosamine pentaacetate with trimethylsilyl triflate (TMSOTf) in dichloromethane (DCM) as shown in Scheme 1 below. Glycosylation with Cbz-protected 2-(2-aminoethoxy)ethan-1-ol then provided compound II. The Cbz protecting group is removed by hydrogenation to provide Intermediate-A as the trifluoroacetate (TFA) salt. Intermediate B was synthesized based on the same protocol except using Cbz protected 2-(2-(2-aminoethoxy)ethoxy)ethan-1-ol as starting material. Intermediate-A Intermediate-B plan 1
向化合物I(20.0 g, 51.4 mmol)在 100 mL 1,2-二氯乙烷(DCE)中的溶液中加入TMSOTf(17.1 g, 77.2 mmol)。將所得反應溶液在60℃下攪拌2小時,然後在25℃下攪拌1小時;Cbz保護的2-(2-氨基乙氧基)乙-1-醇(13.5 g, 56.5 mmol)在DCE(100 mL)中用4 Å粉末分子篩(10 g)乾燥,在N 2氣氛下在0℃滴加到上述反應溶液中。在N 2氣氛下,將所得反應混合物在25℃下攪拌16小時。過濾反應混合物並用飽和NaHCO 3(200mL)、水(200mL)和飽和鹽水(200mL)洗滌。有機層經無水Na 2SO 4乾燥,過濾並減壓濃縮,得到粗產物,將其與2-甲基四氫呋喃/庚烷(5/3,v/v,1.80L)一起研磨2小時。將所得混合物過濾並乾燥以得到呈白色固體狀的化合物II(15.0g,產率50.3%)。 To a solution of compound I (20.0 g, 51.4 mmol) in 100 mL 1,2-dichloroethane (DCE) was added TMSOTf (17.1 g, 77.2 mmol). The resulting reaction solution was stirred at 60°C for 2 hours and then at 25°C for 1 hour; Cbz-protected 2-(2-aminoethoxy)ethan-1-ol (13.5 g, 56.5 mmol) was dissolved in DCE (100 mL), dried with 4 Å powdered molecular sieve (10 g), and added dropwise to the above reaction solution at 0 °C under N2 atmosphere. The resulting reaction mixture was stirred at 25 °C for 16 h under N2 atmosphere. The reaction mixture was filtered and washed with saturated NaHCO3 (200 mL), water (200 mL) and saturated brine (200 mL). The organic layer was dried over anhydrous Na2SO4 , filtered and concentrated under reduced pressure to obtain the crude product, which was triturated with 2-methyltetrahydrofuran/heptane (5/3, v/v, 1.80L) for 2 hours. The resulting mixture was filtered and dried to obtain compound II as a white solid (15.0 g, yield 50.3%).
將 10% Pd/C(1.50 g)小心地加入到乾燥和氬氣吹掃的氫化瓶中,然後加入10毫升四氫呋喃(THF),然後是化合物II(15.0克,26.4毫摩爾)在THF(300毫升)和TFA(三氟乙酸,3.00克,26.4毫摩爾)中的溶液。將所得混合物脫氣並用H 2吹掃3次並在H 2(45 psi)氣氛下在25℃下攪拌3小時。薄層色譜法(TLC,溶劑:DCM:MeOH = 10:1)表明化合物II已完全消耗。過濾反應混合物並減壓濃縮。將殘餘物溶解在無水DCM(500mL)中並濃縮。該過程重複3次以得到呈泡沫狀白色固體的中間體-A(14.0g,產率96.5%)。1H NMR (400 MHz DMSO-d6): δ ppm 7.90 (d, J = 9.29 Hz, 1 H), 7.78 (br s, 3 H), 5.23 (d, J = 3.26 Hz, 1 H), 4.98 (dd, J = 11.29, 3.26 Hz, 1 H), 4.56 (d, J = 8.53 Hz, 1 H), 3.98 - 4.07 (m, 3 H), 3.79 - 3.93 (m, 2 H), 3.55 - 3.66 (m, 5 H), 2.98 (br d, J = 4.77 Hz, 2 H), 2.11 (s, 3 H), 2.00 (s, 3 H), 1.90 (s, 3 H), 1.76 (s, 3 H)。 10% Pd/C (1.50 g) was carefully added to a dry and argon-purged hydrogenation flask, followed by 10 mL of tetrahydrofuran (THF), followed by compound II (15.0 g, 26.4 mmol) in THF (300 ml) and TFA (trifluoroacetic acid, 3.00 g, 26.4 mmol). The resulting mixture was degassed and purged 3 times with H2 and stirred at 25 °C for 3 h under a H2 (45 psi) atmosphere. Thin layer chromatography (TLC, solvent: DCM:MeOH = 10:1) showed complete consumption of compound II. The reaction mixture was filtered and concentrated under reduced pressure. The residue was dissolved in anhydrous DCM (500 mL) and concentrated. This process was repeated three times to obtain Intermediate-A as a foamy white solid (14.0 g, yield 96.5%). 1H NMR (400 MHz DMSO-d6): δ ppm 7.90 (d, J = 9.29 Hz, 1 H), 7.78 (br s, 3 H), 5.23 (d, J = 3.26 Hz, 1 H), 4.98 (dd , J = 11.29, 3.26 Hz, 1 H), 4.56 (d, J = 8.53 Hz, 1 H), 3.98 - 4.07 (m, 3 H), 3.79 - 3.93 (m, 2 H), 3.55 - 3.66 (m , 5 H), 2.98 (br d, J = 4.77 Hz, 2 H), 2.11 (s, 3 H), 2.00 (s, 3 H), 1.90 (s, 3 H), 1.76 (s, 3 H) .
使用與合成中間體-A類似的程序合成中間體-B。1H NMR (400 MHz DMSO-d6): δ ppm 7.90 (br d, J = 9.03 Hz, 4 H), 5.21 (d, J = 3.51 Hz, 1 H), 4.97 (dd, J = 11.1 Hz, 1 H), 4.54 (d, J = 8.53 Hz, 1 H), 3.98 - 4.06 (m, 3 H), 3.88 (dt, J = 10.9 Hz, 1 H), 3.76 - 3.83 (m, 1 H), 3.49 - 3.61 (m, 9 H), 2.97 (br s, 2 H), 2.10 (s, 3 H), 1.99 (s, 3 H), 1.88 (s, 3 H), 1.78 (s, 3 H).計算質譜C20H34N2O11: 478.22; 實測: 479.3 (M+H+)。 實施例 3.GalNAc 配體簇亞磷 醯胺 GLPA1 、 GLPA2 和 GLPA15 的合成 Intermediate-B was synthesized using a similar procedure to the synthesis of Intermediate-A. 1H NMR (400 MHz DMSO-d6): δ ppm 7.90 (br d, J = 9.03 Hz, 4 H), 5.21 (d, J = 3.51 Hz, 1 H), 4.97 (dd, J = 11.1 Hz, 1 H ), 4.54 (d, J = 8.53 Hz, 1 H), 3.98 - 4.06 (m, 3 H), 3.88 (dt, J = 10.9 Hz, 1 H), 3.76 - 3.83 (m, 1 H), 3.49 - 3.61 (m, 9 H), 2.97 (br s, 2 H), 2.10 (s, 3 H), 1.99 (s, 3 H), 1.88 (s, 3 H), 1.78 (s, 3 H). Calculate Mass spectrum C20H34N2O11: 478.22; measured: 479.3 (M+H+). Example 3. Synthesis of GalNAc ligand cluster phosphoramidites GLPA1 , GLPA2 and GLPA15
按照以下方案2製備GLPA1和GLPA2。從苄基保護的丙烷-1,3-二胺開始,用2-溴乙酸叔丁酯對其進行烷基化,得到三酯化合物I。通過氫化除去苄基保護基,得到仲胺化合物II。將醯胺與6-羥基己酸偶聯得到化合物III。然後在用二氧六環中的HCl處理時除去叔丁基保護基以生成三酸化合物IV。進行三酸化合物IV和中間體-A或中間體-B之間的醯胺偶聯以提供化合物Va或Vb。亞磷醯胺GLPA1或GLPA2是通過化合物Va或Vb與2-氰乙基N,N-二異丙基氯亞磷醯胺和催化量的1H-四唑的亞磷酸化合成的。 方案2 Prepare GLPAl and GLPA2 according to Scheme 2 below. Starting from benzyl-protected propane-1,3-diamine, alkylation with tert-butyl 2-bromoacetate affords triester compound I. Removal of the benzyl protecting group by hydrogenation affords secondary amine compound II. Coupling of amide with 6-hydroxycaproic acid affords compound III. The tert-butyl protecting group is then removed upon treatment with HCl in dioxane to yield triacid compound IV. Amide coupling between triacid compound IV and Intermediate-A or Intermediate-B is performed to provide compound Va or Vb. Phosphoramidite GLPA1 or GLPA2 is synthesized by phosphorylation of compound Va or Vb with 2-cyanoethyl N,N-diisopropyl chloride phosphoramidite and a catalytic amount of 1H-tetrazole. Scenario 2
向N-苄基-1,3-丙二胺(5.00 g, 30.4 mmol)在二甲基甲醯胺(DMF, 100 mL)中的溶液中加入2-溴乙酸叔丁酯(23.7 g, 121 mmol);然後滴加二異丙基乙胺(DIEA,23.61g,182mmol)。將所得反應混合物在25-30℃攪拌16小時。 LCMS顯示 N-苄基-1,3-丙二胺被完全消耗。反應混合物用H 2O(500mL)稀釋並用EtOAc(500mL×2)萃取。合併的有機物用飽和鹽水(1L)洗滌,用無水Na 2SO 4乾燥,過濾,減壓濃縮,得到粗產物;經矽膠柱層析純化(梯度:石油醚:乙酸乙酯20:1至5:1)。獲得無色油狀化合物I(12.1g,產率78.4%)。1H NMR (400 MHz, CDCl 3): δ ppm 7.26 - 7.40 (m, 5 H), 3.79 (s, 2 H), 3.43 (s, 4 H), 3.21 (s, 2 H), 2.72 (dt, J= 16.9, 7.34 Hz, 4 H), 1.70 (quin, J= 7.2 Hz, 2 H), 1.44 - 1.50 (m, 27 H)。 To a solution of N-benzyl-1,3-propanediamine (5.00 g, 30.4 mmol) in dimethylformamide (DMF, 100 mL) was added tert-butyl 2-bromoacetate (23.7 g, 121 mmol); then add diisopropylethylamine (DIEA, 23.61g, 182mmol) dropwise. The resulting reaction mixture was stirred at 25-30°C for 16 hours. LCMS showed complete consumption of N-benzyl-1,3-propanediamine. The reaction mixture was diluted with H 2 O (500 mL) and extracted with EtOAc (500 mL × 2). The combined organic matter was washed with saturated brine (1L), dried over anhydrous Na 2 SO 4 , filtered, and concentrated under reduced pressure to obtain a crude product; purified by silica gel column chromatography (gradient: petroleum ether: ethyl acetate 20:1 to 5: 1). Compound I was obtained as colorless oil (12.1 g, yield 78.4%). 1H NMR (400 MHz, CDCl 3 ): δ ppm 7.26 - 7.40 (m, 5 H), 3.79 (s, 2 H), 3.43 (s, 4 H), 3.21 (s, 2 H), 2.72 (dt, J = 16.9, 7.34 Hz, 4 H), 1.70 (quin, J = 7.2 Hz, 2 H), 1.44 - 1.50 (m, 27 H).
乾燥的氫化瓶用氬氣吹掃3次。加入Pd/C(200mg,10%),然後加入MeOH(5mL),然後加入化合物I(1.00g,1.97mmol)在MeOH(5mL)中的溶液。反應混合物在真空下脫氣並重新填充H 2。這個過程重複3次。將混合物在H 2(15 psi)氣氛下在25℃攪拌12小時。LCMS顯示化合物I被完全消耗。在N 2氣氛下減壓過濾反應混合物。減壓濃縮濾液,得到黃色油狀化合物II(655mg,產率79.7%),其無需進一步純化即可用於下一步。1H NMR (400 MHz, CDCl 3): δ ppm 3.44 (s, 4 H), 3.31 (s, 2 H), 2.78 (t, J = 7.1 Hz, 2 H), 2.68 (t, J = 6.9 Hz, 2 H), 1.88 (br s, 1 H), 1.69 (quin, J = 7.03 Hz, 2 H), 1.44 - 1.50 (s, 27 H)。 The dry hydrogenation bottle was purged three times with argon. Pd/C (200 mg, 10%) was added, followed by MeOH (5 mL), then compound I (1.00 g, 1.97 mmol) in MeOH (5 mL). The reaction mixture was degassed under vacuum and refilled with H2 . This process is repeated 3 times. The mixture was stirred at 25°C for 12 hours under an atmosphere of H2 (15 psi). LCMS showed that Compound I was completely consumed. The reaction mixture was filtered under reduced pressure under N2 atmosphere. The filtrate was concentrated under reduced pressure to obtain compound II (655 mg, yield 79.7%) as a yellow oil, which was used in the next step without further purification. 1H NMR (400 MHz, CDCl 3 ): δ ppm 3.44 (s, 4 H), 3.31 (s, 2 H), 2.78 (t, J = 7.1 Hz, 2 H), 2.68 (t, J = 6.9 Hz, 2 H), 1.88 (br s, 1 H), 1.69 (quin, J = 7.03 Hz, 2 H), 1.44 - 1.50 (s, 27 H).
化合物II(655mg,1.57mmol)、6-羥基己酸(249mg,1.89mmol)、DIEA(1.02g,7.86mmol)、1-乙基-3-(3-二甲氨基丙基)碳二亞胺鹽酸鹽(EDCI,904mg,4.72mmol)和1-羥基苯並三唑(HOBt,637mg,4.72mmol)的DMF(6mL)溶液的混合物脫氣並用N 2吹掃3次;然後在N 2氣氛下在 25℃攪拌3小時。LCMS指示所需產物。反應混合物用H 2O(10mL)稀釋並用EtOAc 20mL(10mL×2)萃取。合併有機物並用飽和鹽水(20mL)洗滌,經無水Na 2SO 4乾燥,過濾並濃縮以得到粗產物;將其通過矽膠柱色譜法(梯度:石油醚:乙酸乙酯從5:1至1:1)純化,得到呈黃色油狀的化合物III(650mg,產率77.8%)。1H NMR (400 MHz, CDCl 3): δ ppm 3.90 - 3.95 (s, 2 H), 3.63 (t, J = 6.40 Hz, 2 H), 3.38 - 3.45 (m, 6 H), 2.72 (t, J = 6.65 Hz, 2 H), 2.40 (t, J = 7.28 Hz, 2 H), 1.55 - 1.75 (m, 8 H), 1.44 (s, 27 H). 計算質譜C27H50N2O8: 530.36; 實測: 531.3 (M+H +)。 Compound II (655mg, 1.57mmol), 6-hydroxycaproic acid (249mg, 1.89mmol), DIEA (1.02g, 7.86mmol), 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide A mixture of hydrochloride (EDCI, 904 mg, 4.72 mmol) and 1-hydroxybenzotriazole (HOBt, 637 mg, 4.72 mmol) in DMF (6 mL) was degassed and purged 3 times with N; then incubated under N atmosphere Stir for 3 hours at 25°C. LCMS indicated the desired product. The reaction mixture was diluted with H 2 O (10 mL) and extracted with EtOAc 20 mL (10 mL × 2). The organics were combined and washed with saturated brine ( 20 mL), dried over anhydrous Na2SO4 , filtered and concentrated to give the crude product; this was passed through silica gel column chromatography (gradient: petroleum ether: ethyl acetate from 5:1 to 1:1 ) was purified to obtain compound III (650 mg, yield 77.8%) as yellow oil. 1H NMR (400 MHz, CDCl 3 ): δ ppm 3.90 - 3.95 (s, 2 H), 3.63 (t, J = 6.40 Hz, 2 H), 3.38 - 3.45 (m, 6 H), 2.72 (t, J = 6.65 Hz, 2 H), 2.40 (t, J = 7.28 Hz, 2 H), 1.55 - 1.75 (m, 8 H), 1.44 (s, 27 H). Calculated mass spectrum C27H50N2O8: 530.36; measured: 531.3 (M +H + ).
將化合物III(5.5g,10.3mmol)在HCl/二氧六環(2M,55mL)中的混合物在25℃下攪拌3小時。LCMS顯示完全消耗化合物III。過濾反應混合物,用EtOAc(50mL)洗滌,減壓乾燥,得到粗產物。將其溶解在CH3CN(50mL)中,真空除去揮發物。重複該過程3次以得到呈白色固體狀的化合物IV(2.05g,產率54.5%)。 1H NMR (400 MHz, D 2O): δ ppm 4.21 (s, 1 H), 4.07 (d, J = 4.5 Hz, 4 H), 3.99 (s, 1 H), 3.45 - 3.52 (m, 3 H), 3.42 (t, J = 6.5 Hz, 1 H), 3.32 - 3.38 (m, 1 H), 3.24 - 3.31 (m, 1 H), 2.37 (t, J = 7.4 Hz, 1 H), 2.24 (t, J = 7.4 Hz, 1 H), 1.99 (dt, J = 15.5, 7.53 Hz, 1 H), 1.85 - 1.94 (m, 1 H), 1.85 - 1.94 (m, 1 H), 1.39 - 1.56 (m, 4 H), 1.19 - 1.31 (m, 2 H)。 A mixture of compound III (5.5 g, 10.3 mmol) in HCl/dioxane (2M, 55 mL) was stirred at 25 °C for 3 h. LCMS showed complete consumption of compound III. The reaction mixture was filtered, washed with EtOAc (50 mL), and dried under reduced pressure to obtain crude product. Dissolve this in CH3CN (50 mL) and remove volatiles in vacuo. This process was repeated three times to obtain compound IV as a white solid (2.05 g, yield 54.5%). 1 H NMR (400 MHz, D 2 O): δ ppm 4.21 (s, 1 H), 4.07 (d, J = 4.5 Hz, 4 H), 3.99 (s, 1 H), 3.45 - 3.52 (m, 3 H), 3.42 (t, J = 6.5 Hz, 1 H), 3.32 - 3.38 (m, 1 H), 3.24 - 3.31 (m, 1 H), 2.37 (t, J = 7.4 Hz, 1 H), 2.24 (t, J = 7.4 Hz, 1 H), 1.99 (dt, J = 15.5, 7.53 Hz, 1 H), 1.85 - 1.94 (m, 1 H), 1.85 - 1.94 (m, 1 H), 1.39 - 1.56 (m, 4 H), 1.19 - 1.31 (m, 2 H).
將化合物IV(500 mg, 1.05 mmol)、中間體-A(2.02 g, 3.67 mmol)、DIEA (813 mg, 6.30 mmol)、EDCI(704 mg, 3.67 mmol)和在DMF(10 毫升)中的HOBt(496 mg, 3.67 mmol)的混合物脫氣並用N 2吹掃3次,然後將混合物在N 2氣氛下在25℃攪拌3小時。LCMS 指示所需產物。通過加入H 2O(10mL)淬滅反應混合物,用DCM(10mL×2)萃取。合併的有機物用10%檸檬酸(20mL)萃取。水相用飽和NaHCO 3溶液中和並用DCM(10 mL x 2)再萃取。有機物經硫酸鈉乾燥,過濾並在減壓下濃縮以產生呈白色固體狀的化合物Va(570mg,0.281mmol,產率26.8%)。 1H NMR: (400 MHz, CDCl 3) ppm δ 7.84 - 8.12 (m, 3 H), 6.85 - 7.15 (m, 2 H), 6.66 - 6.81 (m, 1 H), 5.36 (br d, J = 2.7 Hz, 3 H), 5.11 - 5.27 (m, 3 H), 4.63 - 4.85 (m, 3 H), 3.90 - 4.25 (m, 18 H), 3.37 - 3.75 (m, 28 H), 3.15 - 3.28 (m, 4 H), 2.64 (br d, J = 6.53 Hz, 2 H), 2.30 - 2.46 (m, 2 H), 2.13 - 2.18 (m, 9 H), 2.05 (s, 9 H), 1.94 - 2.03 (m, 18 H), 1.68 (br s, 2 H), 1.45 (br s, 2 H), 1.12 (br t, J = 7.0 Hz, 2 H)。 Compound IV (500 mg, 1.05 mmol), Intermediate-A (2.02 g, 3.67 mmol), DIEA (813 mg, 6.30 mmol), EDCI (704 mg, 3.67 mmol) and HOBt in DMF (10 mL) (496 mg, 3.67 mmol) was degassed and purged 3 times with N2 , and then the mixture was stirred at 25 °C under N2 atmosphere for 3 h. LCMS indicated the desired product. The reaction mixture was quenched by adding H 2 O (10 mL) and extracted with DCM (10 mL × 2). The combined organics were extracted with 10% citric acid (20 mL). The aqueous phase was neutralized with saturated NaHCO solution and re-extracted with DCM (10 mL x 2). The organics were dried over sodium sulfate, filtered and concentrated under reduced pressure to give compound Va as a white solid (570 mg, 0.281 mmol, 26.8% yield). 1 H NMR: (400 MHz, CDCl 3 ) ppm δ 7.84 - 8.12 (m, 3 H), 6.85 - 7.15 (m, 2 H), 6.66 - 6.81 (m, 1 H), 5.36 (br d, J = 2.7 Hz, 3 H), 5.11 - 5.27 (m, 3 H), 4.63 - 4.85 (m, 3 H), 3.90 - 4.25 (m, 18 H), 3.37 - 3.75 (m, 28 H), 3.15 - 3.28 (m, 4 H), 2.64 (br d, J = 6.53 Hz, 2 H), 2.30 - 2.46 (m, 2 H), 2.13 - 2.18 (m, 9 H), 2.05 (s, 9 H), 1.94 - 2.03 (m, 18 H), 1.68 (br s, 2 H), 1.45 (br s, 2 H), 1.12 (br t, J = 7.0 Hz, 2 H).
向化合物Va(260 mg, 0.161 mmol)的無水DCM(5 mL)溶液中加入四唑二異丙基銨(30.3 mg, 0.177 mmol);然後在環境溫度和N 2下滴加3-雙(二異丙基氨基)膦醯氧基丙腈(194 mg, 0.645 mmol)。將反應混合物在20至25℃攪拌2小時。LCMS表明化合物Va被完全消耗。冷却至-20℃後,將反應混合物在0℃加入攪拌的鹽水/飽和NaHCO 3(1:1,5mL)溶液。攪拌1分鐘後,加入DCM(5mL)。出現分層。有機層用鹽水/飽和 NaHCO 3水溶液(1:1, 5 mL)洗滌,用Na 2SO 4乾燥,過濾並濃縮至體積約1 mL。在攪拌下將殘餘溶液滴加到20mL甲基叔丁基醚(MTBE)中。這導致白色固體沉澱。將混合物離心,收集固體。將固體重新溶解在1mL DCM中並通過加入MTBE(20mL)沉澱。再次通過離心分離固體。將收集的固體溶解在無水CH 3CN中。除去揮發物。該過程再重複兩次,得到呈白色固體狀的GalNAc配體亞磷醯胺化合物GLPA1(153 mg, 84.4 μmol)。1H NMR (400 MHz, CDCl 3): ppm δ 7.71 - 8.06 (m, 2 H), 6.60 - 7.06 (m, 3 H), 5.37 (br d, J = 3.0 Hz, 3 H), 5.18 - 5.32 (m, 3 H), 4.70 - 4.86 (m, 3 H), 3.92 - 4.25 (m, 18 H), 3.42 - 3.85 (m, 30 H), 3.25 (m, 4 H), 2.59 - 2.75 (m, 4 H), 2.27 - 2.44 (m, 2 H), 2.15 - 2.20 (s, 9 H) 2.07 (s, 9 H), 1.96 - 2.03 (m, 18 H), 1.65 (br s, 4 H), 1.44 (br d, J = 7.28 Hz, 2 H), 1.14 - 1.24 (m, 12 H). 31P NMR (CDCl 3): ppm δ 147.15。 To a solution of compound Va (260 mg, 0.161 mmol) in anhydrous DCM (5 mL) was added tetrazole diisopropylammonium (30.3 mg, 0.177 mmol); then 3 -bis(diisopropylammonium) was added dropwise at ambient temperature and N Isopropylamino)phosphonyloxypropionitrile (194 mg, 0.645 mmol). The reaction mixture was stirred at 20 to 25°C for 2 hours. LCMS showed that compound Va was completely consumed. After cooling to -20°C, the reaction mixture was added to a stirred brine/saturated NaHCO 3 (1:1, 5 mL) solution at 0°C. After stirring for 1 minute, DCM (5 mL) was added. Stratification occurs. The organic layer was washed with brine/saturated aqueous NaHCO solution (1 : 1, 5 mL), dried over Na2SO4 , filtered and concentrated to a volume of approximately 1 mL. The remaining solution was added dropwise to 20 mL of methyl tert-butyl ether (MTBE) while stirring. This resulted in the precipitation of a white solid. The mixture was centrifuged and the solids were collected. The solid was redissolved in 1 mL DCM and precipitated by adding MTBE (20 mL). The solid was separated again by centrifugation. The collected solid was dissolved in anhydrous CH3CN . Remove volatiles. This process was repeated two more times to obtain the GalNAc ligand phosphoramidite compound GLPA1 (153 mg, 84.4 μmol) as a white solid. 1H NMR (400 MHz, CDCl 3 ): ppm δ 7.71 - 8.06 (m, 2 H), 6.60 - 7.06 (m, 3 H), 5.37 (br d, J = 3.0 Hz, 3 H), 5.18 - 5.32 ( m, 3 H), 4.70 - 4.86 (m, 3 H), 3.92 - 4.25 (m, 18 H), 3.42 - 3.85 (m, 30 H), 3.25 (m, 4 H), 2.59 - 2.75 (m, 4 H), 2.27 - 2.44 (m, 2 H), 2.15 - 2.20 (s, 9 H) 2.07 (s, 9 H), 1.96 - 2.03 (m, 18 H), 1.65 (br s, 4 H), 1.44 (br d, J = 7.28 Hz, 2 H), 1.14 - 1.24 (m, 12 H). 31P NMR (CDCl 3 ): ppm δ 147.15.
除了使用中間體-B之外,使用相同的程序合成GalNAc配體亞磷醯胺化合物GLPA2。1H NMR (400 MHz, CDCl 3): ppm δ 7.94 - 8.18 (m, 1 H), 7.69 (br s, 1 H), 6.66 - 7.10 (m, 3 H), 5.35 (d, J = 3.5 Hz, 3 H), 5.07 - 5.25 (m, 3 H), 4.76 - 4.86 (m, 3 H), 4.01 - 4.31 (m, 10 H), 3.91 - 4.01 (m, 8 H), 3.74 - 3.86 (m, 4 H), 3.52 - 3.71 (m, 30 H), 3.42 - 3.50 (m, 6 H), 3.15 - 3.25 (m, 4 H), 2.52 - 2.70 (m, 4 H), 2.22 - 2.45 (m, 2 H), 2.15 - 2.22 (s, 9 H), 2.06 (s, 9 H), 1.95 - 2.03 (m, 18 H), 1.77 (br s, 2 H), 1.58 - 1.66 (m, 4 H), 1.40 (m, 2 H), 1.08 - 1.24 (m, 12 H). 31P NMR (CDCl 3): ppm δ 147.12。 The GalNAc ligand phosphoramidite compound GLPA2 was synthesized using the same procedure except that Intermediate-B was used. 1H NMR (400 MHz, CDCl 3 ): ppm δ 7.94 - 8.18 (m, 1 H), 7.69 (br s , 1 H), 6.66 - 7.10 (m, 3 H), 5.35 (d, J = 3.5 Hz, 3 H), 5.07 - 5.25 (m, 3 H), 4.76 - 4.86 (m, 3 H), 4.01 - 4.31 (m, 10 H), 3.91 - 4.01 (m, 8 H), 3.74 - 3.86 (m, 4 H), 3.52 - 3.71 (m, 30 H), 3.42 - 3.50 (m, 6 H), 3.15 - 3.25 (m, 4 H), 2.52 - 2.70 (m, 4 H), 2.22 - 2.45 (m, 2 H), 2.15 - 2.22 (s, 9 H), 2.06 (s, 9 H), 1.95 - 2.03 ( m, 18 H), 1.77 (br s, 2 H), 1.58-1.66 (m, 4 H), 1.40 (m, 2 H), 1.08-1.24 (m, 12 H). 31P NMR (CDCl 3 ): ppm δ 147.12.
按照以下方案3製備GLPA15。 Prepare GLPA15 following Scheme 3 below.
向中間體化合物II(275 g, 660 mmol, 1.00 當量(eq))的二氯甲烷(2.75 L)溶液中加入三乙胺(133 g, 1.32 mol, 2.00 eq.), 隨後滴加入Cbz-Cl (169 g, 990 mmol, 1.50 eq.)。反應液在25 ℃ 攪拌2小時,LCMS顯示化合物II完全轉化。反應液依次用 NaHCO 3(800 mL)飽和溶液、飽和食鹽水(500 mL)洗滌,有機相用無水Na 2SO 4乾燥。過濾除去乾燥劑後,濾液濃縮至乾。該粗品經柱層析後(SiO 2, PE/EA=100/1 to 5/1)得到無色油狀化合物III-1 (290 g, 527 mmol, 產率75.7%)。 1H NMR (400 MHz in DMSO-d6): δ ppm 7.23 - 7.40 (m, 5 H), 5.00 - 5.12 (m, 2 H), 3.86 - 3.95 (m, 2 H), 3.23 - 3.39 (m, 6 H), 2.55 - 2.67 (m, 2 H), 1.56 - 1.64 (m, 2 H), 1.31 - 1.46 (m, 27 H). MS (ESI) [M+H] +m/z: 551.6。 To a solution of intermediate compound II (275 g, 660 mmol, 1.00 equivalents (eq)) in dichloromethane (2.75 L) was added triethylamine (133 g, 1.32 mol, 2.00 eq.), and then Cbz-Cl was added dropwise. (169 g, 990 mmol, 1.50 eq.). The reaction solution was stirred at 25°C for 2 hours, and LCMS showed that compound II was completely converted. The reaction solution was washed with a saturated solution of NaHCO 3 (800 mL) and saturated brine (500 mL) in sequence, and the organic phase was dried over anhydrous Na 2 SO 4 . After filtering to remove the desiccant, the filtrate was concentrated to dryness. The crude product was subjected to column chromatography (SiO 2 , PE/EA=100/1 to 5/1) to obtain colorless oily compound III-1 (290 g, 527 mmol, yield 75.7%). 1 H NMR (400 MHz in DMSO-d6): δ ppm 7.23 - 7.40 (m, 5 H), 5.00 - 5.12 (m, 2 H), 3.86 - 3.95 (m, 2 H), 3.23 - 3.39 (m, 6 H), 2.55 - 2.67 (m, 2 H), 1.56 - 1.64 (m, 2 H), 1.31 - 1.46 (m, 27 H). MS (ESI) [M+H] + m/z: 551.6.
向化合物III-1 (145 g, 263 mmol, 1.00 eq) 中加入 HCOOH (2.9 L),該溶液在 60 ℃下攪拌12小時,LCMS顯示化合物III-1轉化完全。向反應液中加入1.5 L甲苯 和1.5L乙腈,減壓濃縮至約500 mL, 隨後加入甲苯/乙腈(1:1,~750 mL) 並濃縮至約500 mL, 然後加入乙腈(~1000 mL)並濃縮至乾,粗品用700 mL乙腈在60 ℃ 粉碎2小時,過濾。收集固體,乾燥得白色固體化合物IV-1 (105 g, 定量)。1H NMR (400 MHz in DMSO-d6): δ ppm 7.26 - 7.40 (m, 5H), 5.02 - 5.10 (m, 2H), 3.89 - 4.00 (m, 2H), 3.36 - 3.45 (m, 4H), 3.24 - 3.34 (m, 2H), 2.59 - 2.72 (m, 2H), 1.40 (s, 2H). MS (ESI) [M+H] +m/z: 383.0。 HCOOH (2.9 L) was added to compound III-1 (145 g, 263 mmol, 1.00 eq ), and the solution was stirred at 60 °C for 12 hours. LCMS showed that compound III-1 was completely converted. Add 1.5 L toluene and 1.5 L acetonitrile to the reaction solution, concentrate under reduced pressure to about 500 mL, then add toluene/acetonitrile (1:1, ~750 mL) and concentrate to about 500 mL, then add acetonitrile (~1000 mL) And concentrated to dryness, the crude product was pulverized with 700 mL acetonitrile at 60°C for 2 hours and filtered. The solid was collected and dried to obtain compound IV-1 as a white solid (105 g, quantitative). 1H NMR (400 MHz in DMSO-d6): δ ppm 7.26 - 7.40 (m, 5H), 5.02 - 5.10 (m, 2H), 3.89 - 4.00 (m, 2H), 3.36 - 3.45 (m, 4H), 3.24 - 3.34 (m, 2H), 2.59 - 2.72 (m, 2H), 1.40 (s, 2H). MS (ESI) [M+H] + m/z: 383.0.
向化合物IV-1 (100 g, 261 mmol .)和中間體-A (502 g, 915. mmol, 3.50 eq.) 的DMF (1.0 L)溶液中加入TBTU(327 g, 1.02 mol, 3.90 eq.), 三乙胺 (212 g, 2.09 mol, 8.00 eq.),反應在25 ℃進行1小時,LCMS顯示化合物IV-1轉化完成。將反應液加入到 4000 mL水中, 並用甲基叔丁基醚 (2000 mL 分兩次) 萃取除去雜質,剩餘水相用二氯甲烷(3000 mL 分兩次)萃取。二氯甲烷相依次用10%檸檬酸水溶液 (2000 mL 分兩次)、飽和 NaHCO 3(2.0 L 分兩次), 飽和鹽水(2.0 L)洗滌, 無水Na 2SO 4乾燥。過濾得濾液,減壓濃縮得到白色固體化合物V-1 (260 g, 159 mmol, 產率60.9%) 。 1H NMR (400 MHz in DMSO-d6): δ ppm 7.99 - 8.08 (m, 2 H), 7.93 (br d, J=5.50 Hz, 1 H), 7.79 - 7.86 (m, 3 H), 7.26 - 7.39 (m, 5 H), 5.22 (d, J=3.13 Hz, 3 H), 4.95 - 5.08 (m, 5 H), 4.54 (br d, J=8.38 Hz, 3 H), 4.03 (s, 9 H), 3.81 - 3.93 (m, 5 H), 3.76 (br d, J=4.88 Hz, 3 H), 3.44 - 3.62 (m, 10 H), 3.34 - 3.43 (m, 6 H), 3.24 (br d, J=6.13 Hz, 7 H), 3.02 - 3.09 (m, 4 H), 2.40 - 2.47 (m, 2 H), 2.10 (s, 9 H), 1.99 (s, 9 H), 1.89 (s, 9 H), 1.77 (s, 9 H), 1.57 - 1.68 (m, 2 H)。 MS (ESI) [M+H] +m/z: 816.4。 To a solution of compound IV-1 (100 g, 261 mmol . ) and Intermediate-A (502 g, 915. mmol, 3.50 eq. ) in DMF (1.0 L) was added TBTU (327 g, 1.02 mol, 3.90 eq. ), triethylamine (212 g, 2.09 mol, 8.00 eq. ), the reaction was carried out at 25°C for 1 hour, and LCMS showed that the conversion of compound IV-1 was completed. The reaction solution was added to 4000 mL of water, and extracted with methyl tert-butyl ether (2000 mL twice) to remove impurities. The remaining aqueous phase was extracted with dichloromethane (3000 mL twice). The dichloromethane phase was washed successively with 10% citric acid aqueous solution (2000 mL divided into two times), saturated NaHCO 3 (2.0 L divided into two times), saturated brine (2.0 L), and dried over anhydrous Na 2 SO 4 . The filtrate was filtered and concentrated under reduced pressure to obtain compound V-1 as a white solid (260 g, 159 mmol, yield 60.9%). 1 H NMR (400 MHz in DMSO-d6): δ ppm 7.99 - 8.08 (m, 2 H), 7.93 (br d, J=5.50 Hz, 1 H), 7.79 - 7.86 (m, 3 H), 7.26 - 7.39 (m, 5 H), 5.22 (d, J=3.13 Hz, 3 H), 4.95 - 5.08 (m, 5 H), 4.54 (br d, J=8.38 Hz, 3 H), 4.03 (s, 9 H), 3.81 - 3.93 (m, 5 H), 3.76 (br d, J=4.88 Hz, 3 H), 3.44 - 3.62 (m, 10 H), 3.34 - 3.43 (m, 6 H), 3.24 (br d, J=6.13 Hz, 7 H), 3.02 - 3.09 (m, 4 H), 2.40 - 2.47 (m, 2 H), 2.10 (s, 9 H), 1.99 (s, 9 H), 1.89 (s , 9 H), 1.77 (s, 9 H), 1.57 - 1.68 (m, 2 H). MS (ESI) [M+H] + m/z: 816.4.
用氬氣惰性化2 L氫化釜並小心加入乾Pd/C (9 g),加入 MeOH (50 mL) 潤濕Pd/C , 然後在氬氣氣氛下緩慢加入化合物V-1 (90 g, 55.1 mmol, 1.00 eq.) 和三氟乙酸 (6.29 g, 55.1 mmol, 1.00 eq.) 的MeOH (850 mL)溶液。混合物經脫氣/加H 2三次置換為氫氣氣氛,在25 ℃攪拌10小時。LCMS顯示化合物V-1轉化完全,過濾除去Pd/C,濾液經減壓濃縮得到化合物VI-1 (80 g, 產率90.2%). 1H NMR (400 MHz in DMSO-d6): δ ppm 9.12 (br s, 2 H), 8.50 (br t, J=5.19 Hz, 1 H), 8.10 (br t, J=5.50 Hz, 2 H), 7.85 - 7.91 (m, 3 H), 5.22 (d, J=3.25 Hz, 3 H), 4.95 - 5.01 (m, 3 H), 4.52 - 4.58 (m, 3 H), 4.03 (s, 9 H), 3.84 - 3.93 (m, 3 H), 3.75 - 3.83 (m, 3 H), 3.39 - 3.61 (m, 16 H), 3.23 - 3.32 (m, 6 H), 3.15 - 3.18 (m, 3 H), 2.97 - 3.05 (m, 2 H), 2.54 - 2.61 (m, 2 H), 2.10 (s, 9 H), 2.00 (s, 9 H), 1.89 (s, 9 H), 1.77 - 1.80 (m, 9 H), 1.70 - 1.76 (m, 2 H). MS (ESI) [M+H] +m/z: 749.3。 Inert the 2 L hydrogenation kettle with argon and carefully add dry Pd/C (9 g), add MeOH (50 mL) to moisten the Pd/C, and then slowly add compound V-1 (90 g, 55.1 mmol, 1.00 eq. ) and trifluoroacetic acid (6.29 g, 55.1 mmol, 1.00 eq. ) in MeOH (850 mL). The mixture was replaced with hydrogen atmosphere by degassing/adding H 2 three times, and stirred at 25°C for 10 hours. LCMS showed that compound V-1 was completely converted. Pd/C was removed by filtration, and the filtrate was concentrated under reduced pressure to obtain compound VI-1 (80 g, yield 90.2%). 1 H NMR (400 MHz in DMSO-d6): δ ppm 9.12 (br s, 2 H), 8.50 (br t, J=5.19 Hz, 1 H), 8.10 (br t, J=5.50 Hz, 2 H), 7.85 - 7.91 (m, 3 H), 5.22 (d, J=3.25 Hz, 3 H), 4.95 - 5.01 (m, 3 H), 4.52 - 4.58 (m, 3 H), 4.03 (s, 9 H), 3.84 - 3.93 (m, 3 H), 3.75 - 3.83 (m, 3 H), 3.39 - 3.61 (m, 16 H), 3.23 - 3.32 (m, 6 H), 3.15 - 3.18 (m, 3 H), 2.97 - 3.05 (m, 2 H), 2.54 - 2.61 (m, 2 H), 2.10 (s, 9 H), 2.00 (s, 9 H), 1.89 (s, 9 H), 1.77 - 1.80 (m, 9 H), 1.70 - 1.76 (m, 2 H) . MS (ESI) [M+H] + m/z: 749.3.
向化合物VI-1 (270 g, 168 mmol, 1.00 eq.)和戊二酸酐 (28.6 g, 252 mmol, 1.50 eq) 的二氯甲烷(2.7 L) 溶液中加入三乙胺(67.8 g, 672 mmol, 4.00 eq),該溶液在25 ℃ 攪拌1小時,LCMS顯示化合物VI-1完全轉化為化合物VII。向反應液中加入4-羥基呱啶(42.4 g, 420 mmol, 2.50 eq.)和 TBTU(107 g, 335 mmol, 2.00 eq.), 並在25 ℃繼續攪拌1小時。LCMS顯示化合物VII轉化完全。緩慢加入飽和NH 4Cl (3.0 L)淬滅反應,分層,水相用二氯甲烷(2 x 1000 mL) 萃取並與先前的有機相合併。合併的有機相用飽和NaHCO 3(aq)和飽和鹽水的1:1混合液(3.0 L)洗滌, 用無水Na 2SO 4乾燥, 過濾減壓濃縮。粗品溶於1.5 L二氯甲烷, 滴加到甲基叔丁基醚 (7.5 L)中, 半透明的白色沉澱在滴加過程中逐漸形成。真空過濾沉澱,收集固體真空乾燥得到白色固體化合物VIII (207 g, 產率72.8%) 。 1H NMR (400 MHz in DMSO-d6): δ ppm 8.05 (br d, J=2.00 Hz, 2 H), 7.82 (br d, J=7.38 Hz, 3 H), 5.21 (br s, 3 H), 4.98 (br d, J=10.26 Hz, 3 H), 4.72 (br s, 1 H), 4.54 (br d, J=7.88 Hz, 3 H), 4.03 (br s, 9 H), 3.74 - 3.94 (m, 9 H), 3.45 - 3.71 (m, 12 H), 3.40 (br s, 6 H), 3.24 (br s, 7 H), 3.07 (br d, J=14.13 Hz, 5 H), 2.91 - 3.01 (m, 1 H), 2.24 - 2.44 (m, 5 H), 2.20 (br s, 1 H), 2.10 (s, 9 H), 1.96 - 2.04 (m, 9 H), 1.89 (br s, 9 H), 1.74 - 1.81 (m, 9 H), 1.51 - 1.73 (m, 6 H), 1.07 - 1.36 (m, 3 H). MS (ESI) [M+H] +m/z: 848.0。 To a solution of compound VI-1 (270 g, 168 mmol, 1.00 eq. ) and glutaric anhydride (28.6 g, 252 mmol, 1.50 eq. ) in dichloromethane (2.7 L) was added triethylamine (67.8 g, 672 mmol , 4.00 eq ), the solution was stirred at 25°C for 1 hour, and LCMS showed that compound VI-1 was completely converted into compound VII. 4-Hydroxypyridine (42.4 g, 420 mmol, 2.50 eq. ) and TBTU (107 g, 335 mmol, 2.00 eq. ) were added to the reaction solution, and stirring was continued at 25°C for 1 hour. LCMS showed complete conversion of compound VII. The reaction was quenched by slowly adding saturated NH 4 Cl (3.0 L), the layers were separated, and the aqueous phase was extracted with dichloromethane (2 x 1000 mL) and combined with the previous organic phase. The combined organic phases were washed with a 1:1 mixture of saturated NaHCO 3 (aq) and saturated brine (3.0 L), dried over anhydrous Na 2 SO 4 , filtered, and concentrated under reduced pressure. The crude product was dissolved in 1.5 L of methylene chloride and added dropwise to methyl tert-butyl ether (7.5 L). A translucent white precipitate gradually formed during the dropping process. The precipitate was filtered under vacuum, and the solid was collected and dried under vacuum to obtain compound VIII as a white solid (207 g, yield 72.8%). 1 H NMR (400 MHz in DMSO-d6): δ ppm 8.05 (br d, J=2.00 Hz, 2 H), 7.82 (br d, J=7.38 Hz, 3 H), 5.21 (br s, 3 H) , 4.98 (br d, J=10.26 Hz, 3 H), 4.72 (br s, 1 H), 4.54 (br d, J=7.88 Hz, 3 H), 4.03 (br s, 9 H), 3.74 - 3.94 (m, 9 H), 3.45 - 3.71 (m, 12 H), 3.40 (br s, 6 H), 3.24 (br s, 7 H), 3.07 (br d, J=14.13 Hz, 5 H), 2.91 - 3.01 (m, 1 H), 2.24 - 2.44 (m, 5 H), 2.20 (br s, 1 H), 2.10 (s, 9 H), 1.96 - 2.04 (m, 9 H), 1.89 (br s , 9 H), 1.74 - 1.81 (m, 9 H), 1.51 - 1.73 (m, 6 H), 1.07 - 1.36 (m, 3 H). MS (ESI) [M+H] + m/z: 848.0 .
向化合物 VIII (200 g, 118 mmol, 1.00 eq.)、四唑二異丙基銨 (8.08 g, 47.2 mmol, 0.40 eq) 的二氯甲烷 (2.0 L) 溶液中加入3-雙(二異丙基氨基)膦醯氧基丙腈,(53.3 g, 177 mmol, 1.50 eq.),反應液在40 ℃ 攪拌2小時,LCMS顯示化合物VIII轉化完成。反應液用飽和 NaHCO 3和飽和食鹽水的1:1混合液(2.0 L)洗滌, 經無水Na 2SO 4乾燥,濾液濃縮後所得粗品溶於二氯甲烷(1.2 L), 滴加到攪拌的甲基叔丁基醚 (6.0 L)中, 過濾懸濁液, 濾餅用基叔丁基醚淋洗, 收集固體進行真空乾燥, 將產品溶於二氯甲烷(1.0 L)並濃縮至乾,重複操作4次以除去殘留叔丁基醚得到GLPA15 (164 g, 產率73.3%). 1H NMR (400 MHz in DMSO-d6): δ ppm 8.05 (br d, J = 6.50 Hz, 2 H), 7.81 (br d, J=9.01 Hz, 3 H), 5.22 (d, J=3.25 Hz, 3 H), 4.98 (dd, J=11.26, 3.25 Hz, 3 H), 4.55 (br d, J=8.50 Hz, 3 H), 4.03 (s, 9 H), 3.64 - 3.97 (m, 12 H), 3.55 - 3.63 (m, 6 H), 3.50 (br s, 5 H), 3.40 (br d, J=6.13 Hz, 6 H), 3.17 - 3.30 (m, 9 H), 3.07 (br d, J=14.26 Hz, 4 H), 2.76 (t, J=5.82 Hz, 2 H), 2.18 - 2.47 (m, 6 H), 2.10 (s, 9 H), 1.99 (s, 9 H), 1.89 (s, 9 H), 1.78 (s, 9 H), 1.52 - 1.74 (m, 6 H), 1.12 - 1.19 (m, 12 H). 31P NMR (DMSO-d6): ppm δ 145.25. MS (ESI) [M+H] +m/z: 1895.7。 To a solution of compound VIII (200 g, 118 mmol, 1.00 eq. ) and tetrazole diisopropylammonium (8.08 g, 47.2 mmol, 0.40 eq. ) in dichloromethane (2.0 L) was added 3-bis(diisopropyl ammonium) (53.3 g, 177 mmol, 1.50 eq.), the reaction solution was stirred at 40°C for 2 hours, and LCMS showed that the conversion of compound VIII was completed. The reaction solution was washed with a 1:1 mixture of saturated NaHCO 3 and saturated brine (2.0 L), dried over anhydrous Na 2 SO 4 , and the filtrate was concentrated. The crude product obtained was dissolved in dichloromethane (1.2 L) and added dropwise to the stirring solution. Filter the suspension in methyl tert-butyl ether (6.0 L), rinse the filter cake with methyl tert-butyl ether, collect the solid and dry it under vacuum, dissolve the product in dichloromethane (1.0 L) and concentrate to dryness. Repeat the operation 4 times to remove residual tert-butyl ether to obtain GLPA15 (164 g, yield 73.3%). 1 H NMR (400 MHz in DMSO-d6): δ ppm 8.05 (br d, J = 6.50 Hz, 2 H) , 7.81 (br d, J=9.01 Hz, 3 H), 5.22 (d, J=3.25 Hz, 3 H), 4.98 (dd, J=11.26, 3.25 Hz, 3 H), 4.55 (br d, J= 8.50 Hz, 3 H), 4.03 (s, 9 H), 3.64 - 3.97 (m, 12 H), 3.55 - 3.63 (m, 6 H), 3.50 (br s, 5 H), 3.40 (br d, J =6.13 Hz, 6 H), 3.17 - 3.30 (m, 9 H), 3.07 (br d, J=14.26 Hz, 4 H), 2.76 (t, J=5.82 Hz, 2 H), 2.18 - 2.47 (m , 6 H), 2.10 (s, 9 H), 1.99 (s, 9 H), 1.89 (s, 9 H), 1.78 (s, 9 H), 1.52 - 1.74 (m, 6 H), 1.12 - 1.19 (m, 12 H). 31P NMR (DMSO-d6): ppm δ 145.25. MS (ESI) [M+H] + m/z: 1895.7.
在某些研究中,提供了用於將包含GalNAc(本文也稱為GalNAc遞送化合物)的靶向基團連接到正義鏈的5'-末端的方法,其包括在固相合成的最後一個偶聯步驟中使用GalNAc亞磷醯胺(例如GLPA1),使用這樣的合成工藝,例如在寡核苷酸鏈延長時使用的(即在正義鏈的5'末端添加核苷酸)工藝,以將其連接到正義鏈的5'-末端。In some studies, methods are provided for attaching a targeting group containing GalNAc (also referred to herein as a GalNAc delivery compound) to the 5'-end of the sense strand, which involves the last coupling in the solid phase synthesis Steps using GalNAc phosphoramidite (e.g. GLPA1) are linked using a synthetic process such as that used in oligonucleotide chain extension (i.e. adding nucleotides to the 5' end of the sense strand). to the 5'-end of the sense strand.
在一些研究中,將包含GalNAc的靶向基團連接到正義鏈的3'-末端的方法包括使用包含GLO-n的固體支持物(CPG)。在一些研究中,將包含GalNAc的靶向基團連接到正義鏈的 3'-末端的方法包括:將 GalNAc 靶向基團通過酯鍵連接到CPG固體支持物上,並在合成正義鏈時使用帶有連接的GalNAc靶向基團的所得CPG,這導致GalNAc靶向基團連接在正義鏈的3'-末端。 其他GalNAc亞磷醯胺化合物(GLPAn)也同樣可以在使用合理對應的中間體後,採用本文類似或者本領域中熟知的方法獲得,並作為靶向基團連接到siRNA雙鏈體合適的位置。 實施例 4. 異甘露醇亞磷醯胺(化合物 2 )的合成 In some studies, methods to attach a GalNAc-containing targeting group to the 3'-end of the sense strand include the use of a GLO-n-containing solid support (CPG). In some studies, methods to connect a GalNAc-containing targeting group to the 3'-end of the sense strand include: connecting the GalNAc targeting group to a CPG solid support via an ester bond and using it when synthesizing the sense strand. The resulting CPG has a GalNAc targeting group attached, which results in the GalNAc targeting group being attached to the 3'-end of the sense strand. Other GalNAc phosphoramidite compounds (GLPAn) can also be obtained using methods similar to this article or well-known in the art after using reasonably corresponding intermediates, and can be connected to the appropriate position of the siRNA duplex as a targeting group. Example 4. Synthesis of isomannitol phosphoramidite (compound 2 )
將在吡啶(400毫升)中的DMTrCl(232克,684毫摩爾,1.0當量),加入到化合物A異甘露醇(100克,684毫摩爾,1.0當量)的吡啶(600毫升)溶液中,將混合物在25℃下攪拌16小時。 LC-MS顯示化合物A被完全消耗,並且檢測到一個具有所需質量的主峰。將所得反應混合物用水(500毫升)稀釋,用二氯甲烷(500毫升*2)萃取,合併的有機相,用鹽水(500毫升)洗滌,用Na 2SO 4乾燥並在真空中濃縮以獲得殘留物。 殘餘物用柱層析(DCM/MeOH=100/1至50/1,0.1%Et 3N)純化,得到化合物B(150克,收率48.9%)的黃色固體。 1H NMR: EC4783-404-P1B1_C (400 MHz, DMSO-d6) δ ppm 7.46 (br d, J=7.63 Hz, 2 H) 7.28 - 7.37 (m, 6 H) 7.19 - 7.25 (m, 1 H) 6.90 (br d, J=7.88 Hz, 4 H) 4.70 (d, J=6.50 Hz, 1 H) 3.99 - 4.09 (m, 6 H) 3.88 - 3.96 (m, 2 H) 3.83 (br dd, J=7.82, 6.94 Hz, 1 H) 3.74 (s, 6 H) 3.41 (br t, J=8.13 Hz, 1 H) 3.05 (t, J=8.44 Hz, 1 H) 2.85 (br t, J=7.50 Hz, 1 H)。 DMTrCl (232 g, 684 mmol, 1.0 equiv) in pyridine (400 mL) was added to a solution of Compound A isomannitol (100 g, 684 mmol, 1.0 equiv) in pyridine (600 mL). The mixture was stirred at 25°C for 16 hours. LC-MS showed that compound A was completely consumed and a main peak with the desired mass was detected. The resulting reaction mixture was diluted with water (500 ml), extracted with dichloromethane (500 ml* 2 ), the combined organic phases were washed with brine (500 ml), dried over Na2SO4 and concentrated in vacuo to obtain the residue things. The residue was purified by column chromatography (DCM/MeOH=100/1 to 50/1, 0.1% Et 3 N) to obtain compound B (150 g, yield 48.9%) as a yellow solid. 1 H NMR: EC4783-404-P1B1_C (400 MHz, DMSO-d6) δ ppm 7.46 (br d, J=7.63 Hz, 2 H) 7.28 - 7.37 (m, 6 H) 7.19 - 7.25 (m, 1 H) 6.90 (br d, J=7.88 Hz, 4 H) 4.70 (d, J=6.50 Hz, 1 H) 3.99 - 4.09 (m, 6 H) 3.88 - 3.96 (m, 2 H) 3.83 (br dd, J= 7.82, 6.94 Hz, 1 H) 3.74 (s, 6 H) 3.41 (br t, J=8.13 Hz, 1 H) 3.05 (t, J=8.44 Hz, 1 H) 2.85 (br t, J=7.50 Hz, 1H).
在N 2氣氛下,在向化合物B(80.0克,178毫摩爾,1.0當量)的二氯甲烷(5.0毫升)溶液中,在25℃下滴加2H-四氮唑(0.45M,436毫升,1.1當量),然後滴加化合物C(2-氰基乙基二異丙基氯代亞磷醯胺,80.6克,267毫摩爾,85.0毫升,1.5當量)中的二氯甲烷(200毫升)的溶液;將反應混合物在25℃下攪拌1.0小時; LC-MS顯示化合物B被完全消耗,並且檢測到一個具有所需質量的主峰。 將所得反應混合物冷却至-20℃並倒入冰冷的飽和NaHCO 3(500毫升),用二氯甲烷(500毫升* 3)提取,合併的有機層用NaHCO 3/鹽水=1:1(3 00毫升/300毫升)洗滌,用Na 2SO 4乾燥,並在真空(35℃)中濃縮以獲得殘留物(100毫升)。殘餘物用柱層析法純化(Al 2O 3,DCM/MeOH=100/1至50/1,0.1%Et 3N),得到化合物2(77 g,119 mmol,收率66.5%)為白色固體。 To a solution of compound B (80.0 g, 178 mmol, 1.0 equiv) in dichloromethane (5.0 mL) under N2 atmosphere, 2H-tetrazole (0.45 M, 436 mL, 1.1 equiv), then add dropwise compound C (2-cyanoethyldiisopropylphosphoramidite chloride, 80.6 g, 267 mmol, 85.0 ml, 1.5 equiv) in dichloromethane (200 ml) solution; the reaction mixture was stirred at 25°C for 1.0 hours; LC-MS showed that compound B was completely consumed, and a main peak with the desired mass was detected. Cool the resulting reaction mixture to -20°C and pour into ice-cold saturated NaHCO 3 (500 ml), extract with dichloromethane (500 ml * 3), and combine the organic layers with NaHCO 3 /brine = 1:1 (3 00 ml / 300 ml), dried over Na2SO4 , and concentrated in vacuo (35 °C) to obtain a residue (100 ml). The residue was purified by column chromatography (Al 2 O 3 , DCM/MeOH=100/1 to 50/1, 0.1% Et 3 N) to obtain compound 2 (77 g, 119 mmol, yield 66.5%) as white solid.
1H NMR: EC4783-423-P1B1_C (400 MHz, DMSO-d6)1H NMR: EC4783-423-P1B1_C (400 MHz, DMSO-d6)
δ ppm 7.22 (br d, J=7.50 Hz, 2 H) 7.05 - 7.14 (m, 6 H) 6.96 - 7.02 (m, 1 H) 6.67 (br dd, J=8.82, 1.81 Hz, 4 H) 3.95 - 4.07 (m, 2 H) 3.73 - 3.83 (m, 1 H) 3.62 - 3.72 (m, 2 H) 3.48 - 3.53 (m, 6 H) 3.27 - 3.37 (m, 3 H) 3.11 (s, 6 H) 2.82 (td, J=8.54, 2.31 Hz, 1 H) 2.47 - 2.63 (m, 3 H) 2.28 (br d, J=1.63 Hz, 3 H) 0.82 - 1.00 (m, 13 H)。δ ppm 7.22 (br d, J=7.50 Hz, 2 H) 7.05 - 7.14 (m, 6 H) 6.96 - 7.02 (m, 1 H) 6.67 (br dd, J=8.82, 1.81 Hz, 4 H) 3.95 - 4.07 (m, 2 H) 3.73 - 3.83 (m, 1 H) 3.62 - 3.72 (m, 2 H) 3.48 - 3.53 (m, 6 H) 3.27 - 3.37 (m, 3 H) 3.11 (s, 6 H) 2.82 (td, J=8.54, 2.31 Hz, 1 H) 2.47 - 2.63 (m, 3 H) 2.28 (br d, J=1.63 Hz, 3 H) 0.82 - 1.00 (m, 13 H).
其他的亞磷醯胺化合物可以根據本領域技術人員熟知方法進行製備,例如但不限於現有技術US426,220和WO02/36743中的方法。 實施例 5. 包含異甘露醇單體的固體載體的製備 表示大孔胺甲基聚乙烯樹脂載體部分。 Other phosphoramidite compounds can be prepared according to methods well known to those skilled in the art, such as but not limited to the methods in the prior art US426,220 and WO02/36743. Example 5. Preparation of solid carrier containing isomannitol monomer Represents the macroporous amine methyl polyethylene resin carrier part.
將50 L玻璃釜在氮氣保護下,向玻璃釜中加入二氯甲烷(19.50kg),開動攪拌。控溫20~30℃,向玻璃釜中加入DMTr-imann(1.47 kg),向反應釜中加入三乙胺(1.50 kg)、4-二甲氨基吡啶(0.164 kg),以及加入丁二酸酐(1.34 kg)。體系保溫20~30℃反應18h後取樣,結束反應。向反應完體系中加入飽和碳酸氫鈉溶液(22.50 kg),攪拌10~20min後靜置至分層,分離出下層有機相,上層水相用二氯甲烷萃取2次,合併有機相,採用無水硫酸鈉乾燥,過濾濾液,再轉移旋蒸濃縮至無餾分,形成固體灰色至類白色固體1.83 kg。Place a 50 L glass kettle under nitrogen protection. Add methylene chloride (19.50kg) into the glass kettle and start stirring. Control the temperature at 20~30°C, add DMTr-imann (1.47 kg) to the glass kettle, add triethylamine (1.50 kg), 4-dimethylaminopyridine (0.164 kg) to the reaction kettle, and add succinic anhydride ( 1.34 kg). The system was kept at 20~30°C for 18 hours and then samples were taken to end the reaction. Add saturated sodium bicarbonate solution (22.50 kg) to the reaction system, stir for 10 to 20 minutes and then let it stand until the layers separate. Separate the lower organic phase. Extract the upper aqueous phase twice with dichloromethane. Combine the organic phases and use anhydrous Dry over sodium sulfate, filter the filtrate, and then transfer to a rotary evaporator and concentrate until there is no fraction, forming a solid gray to off-white solid of 1.83 kg.
向100L玻璃釜中加入N,N-二甲基甲醯胺(23.50 kg),開動攪拌。控溫20~30℃,氮氣保護下,通過固體加料漏斗向上述100L玻璃釜中加入上步產物、O-苯並三氮唑-四甲基脲六氟磷酸鹽(0.33 kg)、加入N,N-二異丙基乙胺(0.13kg),加料完畢攪拌10~30 分鐘後放出至50 L鍍鋅桶待用。通過固體加料漏斗向上述100 L固相合成釜中加入大孔胺甲基樹脂(3.25 kg)(購於天津南開和成科技有限公司,批號HA2X1209,負載量0.48mmol/g),控溫20~30℃,向固相合成釜中加入N,N-二甲基甲醯胺(21.00kg+21.00 kg),和上步鍍鋅桶待用反應液。體系於保溫反應,跟踪至固體載量≥250umol/g,載量檢測方法為UV。體系用氮氣壓濾,濾餅用N,N-二甲基甲醯胺淋洗三次(26.00kg+26.10kg+26.00 kg),濾餅留在釜中。向80L玻璃釜中加入CAP.A(50%乙腈和50%乙酸酐,4.40kg+4.42kg+4.30kg)和CAP.B(20%吡啶和30%N-甲基咪唑和50%乙腈,4.40kg+4.40kg+4.47kg),攪拌3~8min後待用。此操作重複進行3次進行蓋帽,向固相合成釜中加入乙腈(18.00 kg+18.00 kg+18.00 kg +17.50 kg+17.50 kg),氮氣鼓泡10~30min後壓濾。重複此操作四次,濾餅在固相合成釜中使用氮氣吹掃2~4 h後轉移至50 L壓濾罐,控溫15~30℃,繼續乾燥,將烘乾後黃色至白色固體產品,重量: 3.516 kg。Add N,N-dimethylformamide (23.50 kg) to the 100L glass kettle and start stirring. Control the temperature at 20~30°C and under nitrogen protection, add the product of the previous step, O-benzotriazole-tetramethylurea hexafluorophosphate (0.33 kg) into the above 100L glass kettle through a solid addition funnel, and add N, N-Diisopropylethylamine (0.13kg), after adding, stir for 10 to 30 minutes and then release into a 50 L galvanized bucket for later use. Add macroporous amine methyl resin (3.25 kg) (purchased from Tianjin Nankai Hecheng Technology Co., Ltd., batch number HA2X1209, loading capacity 0.48mmol/g) into the above 100 L solid phase synthesis kettle through the solid addition funnel, and control the temperature at 20~ 30°C, add N,N-dimethylformamide (21.00kg+21.00 kg) to the solid-phase synthesis kettle, and the reaction solution in the galvanized barrel from the previous step. The system was kept warm and reacted until the solid loading was ≥250umol/g. The loading detection method was UV. The system was filtered with nitrogen pressure, the filter cake was rinsed three times with N,N-dimethylformamide (26.00kg+26.10kg+26.00 kg), and the filter cake was left in the kettle. Add CAP.A (50% acetonitrile and 50% acetic anhydride, 4.40kg+4.42kg+4.30kg) and CAP.B (20% pyridine and 30% N-methylimidazole and 50% acetonitrile, 4.40) to the 80L glass kettle. kg+4.40kg+4.47kg), stir for 3~8 minutes and set aside. Repeat this operation three times for capping, add acetonitrile (18.00 kg+18.00 kg+18.00 kg +17.50 kg+17.50 kg) to the solid-phase synthesis kettle, bubble nitrogen for 10 to 30 minutes and then press filter. Repeat this operation four times. The filter cake is purged with nitrogen in the solid phase synthesis kettle for 2 to 4 hours and then transferred to a 50 L pressure filter tank. The temperature is controlled at 15 to 30°C and continues to dry. The dried yellow to white solid product , Weight: 3.516 kg.
異甘露醇殘基(imann)可以通過本領域技術人員熟知方法,如反向無鹼基(invab)同樣的工藝方法,將其添加到寡核苷酸鏈的5'末端或者3'末端,並進一步添加靶向基團。 實施例 6. 黃嘌呤脫氫酶( XDH ) siRNA 雙鏈體的體外篩選 The isomannitol residue (imann) can be added to the 5' end or 3' end of the oligonucleotide chain through methods well known to those skilled in the art, such as the same process as reverse abasic (invab), and Further targeting groups are added. Example 6. In vitro screening of xanthine dehydrogenase ( XDH ) siRNA duplexes
CAL27 細胞用胰蛋白酶消化並調整到合適的密度,然後接種到24 孔板中,1×10 5細胞/孔。在接種的同時,使用Lipofectamine RNAiMax (Invitrogen -13778-150)以2μL每孔用待測siRNA或對照siRNA轉染細胞。無義對照-2(CON)和待測siRNA以兩個濃度(0.2 nM和5 nM)進行測試。 轉染無義對照-2(CON) siRNA的孔也被用作陰性對照。 CAL27 cells were trypsinized and adjusted to an appropriate density, then seeded into a 24-well plate at 1 × 10 5 cells/well. While inoculating, cells were transfected with siRNA to be tested or control siRNA using Lipofectamine RNAiMax (Invitrogen -13778-150) at 2 μL per well. Nonsense control-2 (CON) and test siRNA were tested at two concentrations (0.2 nM and 5 nM). Wells transfected with nonsense control-2(CON) siRNA were also used as negative controls.
轉染後24小時,去除培養基並收穫細胞用於RNA提取。根據手册使用TRIzol™ Reagent (Invitrogen - 15596018)提取總RNA。Twenty-four hours after transfection, the medium was removed and cells were harvested for RNA extraction. Total RNA was extracted using TRIzol™ Reagent (Invitrogen - 15596018) according to the manual.
根據手册,使用PrimeScript™ RT試劑盒和gDNA Eraser (Perfect Real Time) (TaKaRa-RR047A)合成cDNA。通過qPCR檢測黃嘌呤脫氫酶(XDH)cDNA。平行檢測GAPDH cDNA作為內部對照。PCR如下進行:在95 ℃下進行30秒,然後以在95 ℃下10秒、在60 ℃下30秒的循環進行40個循環。 數據分析 cDNA was synthesized using PrimeScript™ RT Reagent Kit and gDNA Eraser (Perfect Real Time) (TaKaRa-RR047A) according to the manual. Detection of xanthine dehydrogenase (XDH) cDNA by qPCR. GAPDH cDNA was detected in parallel as an internal control. PCR was performed as follows: 95°C for 30 seconds, followed by 40 cycles of 95°C for 10 seconds and 60°C for 30 seconds. data analysis
使用比較性Ct(ΔΔCt)方法,通過相對定量(RQ)確定每個樣品中目標基因的表達;該方法測量目標基因和看家基因(ACTIN )之間的 Ct 差異(ΔCt)。The expression of the target gene in each sample was determined by relative quantification (RQ) using the comparative Ct (ΔΔCt) method; this method measures the Ct difference (ΔCt) between the target gene and a housekeeping gene (ACTIN).
方程式列出如下: ΔCT = 目標基因平均 Ct– ACTIN平均Ct; ΔΔCT=ΔCT (樣品) –ΔCT (無義siRNA對照) ; 目標基因mRNA的相對定量 = 2-ΔΔCT; 抑制%= (對照的相對定量–樣品的相對定量)/對照的相對定量×100%。 The equations are listed below: ΔCT = average Ct of target gene – average Ct of ACTIN; ΔΔCT=ΔCT (sample) –ΔCT (nonsense siRNA control); Relative quantification of target gene mRNA = 2-ΔΔCT; Inhibition % = (relative quantification of control – relative quantification of sample)/relative quantification of control × 100%.
表4提供了使用多種XDH RNAi試劑抑制XDH表達的體外研究的實驗結果;使用的雙鏈序列對應於表 2 中所示的化合物。Table 4 provides experimental results from in vitro studies using various XDH RNAi reagents to inhibit XDH expression; the double-stranded sequences used correspond to the compounds shown in Table 2.
表4 XDH RNAi試劑抑制XDH表達的體外研究的實驗結果
為了評估黃嘌呤脫氫酶(XDH) siRNA的體內活性,使用了感染了編碼人黃嘌呤脫氫酶(XDH)和螢光素酶基因的AAV的小鼠(每組4隻小鼠)。在siRNA給藥前14天,對雌性C57BL/6J小鼠通過靜脈注射1x10^11 或者2x10^11 viral particle of 編碼人黃嘌呤脫氫酶(XDH)和螢光素酶基因的腺相關病毒8(AAV8)載體的原液來進行感染。在第0天,小鼠皮下注射單劑量3 mg/kg、6 mg/kg或者9 mg/kg的黃嘌呤脫氫酶(XDH) siRNA試劑或PBS。在第0天siRNA給藥前和第7和14天終止時收集血樣。測量螢光素酶活性。通過比較siRNA處理組給藥前血樣的螢光素酶活性和第7,14天收集血樣的螢光素酶活性並且基於來自 PBS 處理組的血清樣品中的螢光素酶活性變化進行歸一化,以計算敲低百分比。To evaluate the in vivo activity of xanthine dehydrogenase (XDH) siRNA, mice infected with AAV encoding human xanthine dehydrogenase (XDH) and luciferase genes were used (4 mice per group). Fourteen days before siRNA administration, female C57BL/6J mice were intravenously injected with 1x10^11 or 2x10^11 viral particles of adeno-associated virus 8 encoding human xanthine dehydrogenase (XDH) and luciferase genes ( AAV8) vector stock solution for infection. On day 0, mice were injected subcutaneously with a single dose of 3 mg/kg, 6 mg/kg, or 9 mg/kg xanthine dehydrogenase (XDH) siRNA reagent or PBS. Blood samples were collected before siRNA administration on day 0 and at the end of days 7 and 14. Measure luciferase activity. By comparing the luciferase activity of blood samples before administration in the siRNA-treated group and the luciferase activity of blood samples collected on days 7 and 14 and normalized based on the luciferase activity changes in serum samples from the PBS-treated group , to calculate the knockdown percentage.
實施例7使用對應於表 3 中所示的序列、化學修飾和遞送的化合物, GLO-n為Jayaprakash , et al., (2014) J. Am. Chem. Soc., 136, 16958−16961中的GalNAc3所示的遞送化合物。Example 7 uses compounds corresponding to the sequence, chemical modification, and delivery shown in Table 3, GLO-n in Jayaprakash, et al., (2014) J. Am. Chem. Soc., 136, 16958-16961 Delivery compounds represented by GalNAc3.
在AAV-XDH-螢光素酶轉導小鼠中進行XDH siRNA單次3 mpk皮下劑量篩選。比較siRNA處理組給藥前血樣(第0天)的螢光素酶活性和第7天收集血樣的螢光素酶活性並且基於來自 PBS 處理組的血清樣品中的螢光素酶活性變化進行歸一化,以計算敲低百分比。數據列在表5.XDH siRNA single 3 mpk subcutaneous dose screening in AAV-XDH-luciferase transduced mice. The luciferase activity of the pre-dose blood sample (day 0) of the siRNA-treated group was compared with the luciferase activity of the blood sample collected on day 7 and normalized based on the change in luciferase activity in the serum sample from the PBS-treated group to calculate percent knockdown. The data are listed in Table 5.
表5 XDH siRNA單次3 mpk在AAV-XDH-螢光素酶轉導小鼠中皮下劑量篩選
在AAV-XDH-螢光素酶轉導小鼠中進行XDH siRNA單次6 mpk皮下劑量篩選。比較siRNA處理組給藥前血樣(第0天)的螢光素酶活性和第7天收集血樣的螢光素酶活性並且基於來自 PBS 處理組的血清樣品中的螢光素酶活性變化進行歸一化,以計算敲低百分比。兩次實驗數據分別列在表6 和表7。XDH siRNA single 6 mpk subcutaneous dose screening in AAV-XDH-luciferase transduced mice. The luciferase activity of the pre-dose blood sample (day 0) of the siRNA-treated group was compared with the luciferase activity of the blood sample collected on day 7 and normalized based on the change in luciferase activity in the serum sample from the PBS-treated group to calculate percent knockdown. The two experimental data are listed in Table 6 and Table 7 respectively.
表6 XDH siRNA單次6 mpk在AAV-XDH-螢光素酶轉導小鼠中皮下劑量篩選
表7 XDH siRNA單次6 mpk在AAV-XDH-螢光素酶轉導小鼠中皮下劑量篩選
在AAV-XDH-螢光素酶轉導小鼠中進行XDH siRNA單次9 mpk皮下劑量篩選。比較siRNA處理組給藥前血樣(第0天)的螢光素酶活性和第14天收集血樣的螢光素酶活性並且基於來自 PBS 處理組的血清樣品中的螢光素酶活性變化進行歸一化,以計算敲低百分比。數據列在表8.XDH siRNA single 9 mpk subcutaneous dose screening in AAV-XDH-luciferase transduced mice. The luciferase activity of the pre-dose blood sample (day 0) of the siRNA-treated group was compared with the luciferase activity of the blood sample collected on day 14 and normalized based on the change in luciferase activity in the serum sample from the PBS-treated group. to calculate percent knockdown. The data are listed in Table 8.
表8 XDH siRNA單次9 mpk在AAV-XDH-螢光素酶轉導小鼠中皮下劑量篩選
為了評估siRNA的體內活性,本研究共選擇入組18隻雄性食蟹猴(13-22歲,體重7~9公斤), 每組 3 隻,每隻動物皮下注射給予7.5 mg/kg供試品,使用的供試品對應於下表所示的化合物。In order to evaluate the in vivo activity of siRNA, a total of 18 male cynomolgus monkeys (13-22 years old, weighing 7-9 kg) were selected in this study, with 3 animals in each group. Each animal was given a subcutaneous injection of 7.5 mg/kg test product. , the test samples used correspond to the compounds shown in the table below.
禁食過夜後,在 D-14、D21、D42和D78,分別將動物麻醉(氯胺酮,SC,10mg/kg),採用超聲引導進行活體穿刺從而獲得肝臟樣品約 10 mg,放入 RNAlater 中保存(樣品4℃固定過夜後,轉移到-80℃保存),用於後續的RT-qPCR檢測。結果如表9所示。After fasting overnight, the animals were anesthetized (ketamine, SC, 10 mg/kg) on D-14, D21, D42, and D78, and ultrasonic-guided biopsy was used to obtain about 10 mg of liver samples, which were stored in RNAlater ( After the samples were fixed at 4°C overnight, they were transferred to -80°C for storage) for subsequent RT-qPCR detection. The results are shown in Table 9.
表9 通過qPCR測量的猴子肝臟中XDH mRNA的剩餘百分比
儘管本文已經描述和說明了本發明的幾個實施例,但本領域普通技術人員很容易理解,用於執行此處描述的功能和/或獲得結果和/或一個或更多個優點的多種其他手段和/或結構,以及這些變化和/或修改中的每一個都被認為在本發明的範圍內。更一般地,本領域技術人員將容易理解,此處描述的所有參數、尺寸、材料和配置都是示例性的,並且實際參數、尺寸、材料和/或配置將取决於使用本發明教導的具體應用。本領域技術人員將認識到或能夠僅使用常規實驗來確定本文描述的本發明的特定實施例的許多等價物。因此,應當理解,前述實施例僅通過示例的方式呈現並且屬所附申請專利範圍及其等效物的範圍內,本發明可以以不同於具體描述和要求保護的方式實施。本發明針對在此描述的每個單獨的特徵、系統、物品、材料和/或方法。此外,兩個或更多個此類特徵、系統、物品、材料和/或方法的任何組合,如果此類特徵、系統、物品、材料和/或方法相互不矛盾,則也包括在本發明的範圍內。Although several embodiments of the invention have been described and illustrated herein, those of ordinary skill in the art will readily appreciate that various other methods may be used to perform the functions described herein and/or to obtain the results and/or one or more advantages. Each of these changes and/or modifications, means and/or structure, and such changes and/or modifications are deemed to be within the scope of the invention. More generally, those skilled in the art will readily appreciate that all parameters, dimensions, materials, and configurations described herein are exemplary and that actual parameters, dimensions, materials, and/or configurations will depend on the specific use of the teachings of the present invention. Application. Those skilled in the art will recognize, or be able to ascertain using no more than routine experimentation, many equivalents to the specific embodiments of the invention described herein. It is to be understood, therefore, that the foregoing embodiments are presented by way of example only and within the scope of the appended claims and their equivalents, the invention may be practiced otherwise than as specifically described and claimed. The present invention is directed to each individual feature, system, article, material and/or method described herein. Furthermore, any combination of two or more such features, systems, articles, materials and/or methods is also included in the invention provided that such features, systems, articles, materials and/or methods are not inconsistent with each other. within the range.
如本文所定義和使用的所有定義應理解為對照字典定義、通過引用並入的文件中的定義和/或所定義術語的普通含義。All definitions, as defined and used herein, should be understood against dictionary definitions, definitions in documents incorporated by reference, and/or ordinary meanings of the defined terms.
在說明書和申請專利範圍中並未使用數量限定的情况,除非明確指出相反,否則應理解為“至少一個”。Where a quantitative limitation is not used in the description and patent application, it shall be understood as "at least one" unless explicitly stated to the contrary.
說明書和申請專利範圍中使用的短語“和/或”應理解為表示如此結合的要素中的“一個或兩個”,即這樣的要素在某些情况下組合出現而在其他情况下分離出現。除了由“和/或”具體標識的要素之外,除非明確指出相反,否則可以可選地存在其他要素,無論與那些具體標識的要素相關或不相關。The phrase "and/or" as used in the specification and claims should be understood to mean "one or both" of the elements so combined that such elements appear in combination in some cases and separately in other cases. . In addition to elements specifically identified by "and/or", other elements may optionally be present, whether related or unrelated to those specifically identified elements, unless expressly stated to the contrary.
本申請中引用或參考的所有參考文獻、專利和專利申請和出版物均通過引用整體並入本文。All references, patents and patent applications and publications cited or referenced in this application are hereby incorporated by reference in their entirety.
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