TW201902912A - Synergistic combination of nucleic acid oligonucleotides and anthracycline chemotherapeutic agents - Google Patents

Synergistic combination of nucleic acid oligonucleotides and anthracycline chemotherapeutic agents Download PDF

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TW201902912A
TW201902912A TW107111854A TW107111854A TW201902912A TW 201902912 A TW201902912 A TW 201902912A TW 107111854 A TW107111854 A TW 107111854A TW 107111854 A TW107111854 A TW 107111854A TW 201902912 A TW201902912 A TW 201902912A
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貝勒 帕拉哈卡
希妮 霍普斯
艾帝堤 麥瑟
岳菲
席哈 賽尼
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美商吉瓦納生技公司
伊利諾大學董事會
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Abstract

The invention provides compositions and methods for treating cancers comprising administering a combination of antineoplastic agents, wherein the combination comprises anthracycline chemotherapeutics and one or more nucleic acid molecules capable of down-regulating expression of at least one splice variant of the IG20 gene, and wherein not all splice variants of the IG20 gene are down-regulated. In an embodiment, the splice variant of the IG20 gene is a MADD splice variant and the nucleic acid molecules are siRNA, shRNA and antisense oligonucleotides which comprise a nucleic acid sequence complementary to a nucleic acid sequence of exon 13L of the MADD splice variant or to an mRNA transcript of exon 13L of the MADD splice variant. The invention encompasses methods of treating cancers which include combination therapy with nucleic acid molecules capable of down-regulating the expression of the at least one splice variant of the IG20 gene, and anthracycline chemotherapeutics.

Description

核酸寡核苷酸及蒽環化學療劑之協同性組合Synergistic combination of nucleic acid oligonucleotide and anthracycline chemotherapeutic agent

本發明關於治療癌症之醫藥組成物及方法,其包含投予抗腫瘤劑之組合,其中該組合包含蒽環化學療劑及一或多種能夠調降胰島素瘤-升糖素瘤(Insulinoma-Glucagonoma)(IG20) 基因之至少一種剪接變異體的表現之核酸分子,且其中並非IG20 基因之所有的剪接變異體皆調降。在一實施態樣中,IG20 基因之剪接變異體為MADD剪接變異體(MADD splice variant),能夠調降IG20 基因之至少一種剪接變異體的表現之核酸分子係選自siRNA、shRNA及反義寡核苷酸(antisense oligonucleotide),其中siRNA、shRNA及反義寡核苷酸包含與MADD剪接變異體的外顯子(exon)13L之核酸序列及/或與MADD剪接變異體的外顯子13L之mRNA轉錄本(transcript)互補(complementary)的核酸序列。本發明包含治療癌症之方法,其包括能夠調降IG20 基因之至少一種剪接變異體的表現之核酸分子與蒽環化學療劑(anthracycline chemotherapeutic)之組合療法。The present invention relates to a pharmaceutical composition and method for treating cancer, which includes a combination of administration of an anti-tumor agent, wherein the combination includes an anthracycline chemotherapeutic agent and one or more types of insulinoma-glucagonoma (Insulinoma-Glucagonoma) ( IG20) A nucleic acid molecule that expresses at least one splice variant of a gene, and not all splice variants of the IG20 gene are down-regulated. In one embodiment aspect, splice variants of the gene for the MADD IG20 splice variants (MADD splice variant), can be cut at least one splice IG20 gene expression of a nucleic acid molecule variants selected from siRNA, shRNA and antisense oligonucleotides Nucleotides (antisense oligonucleotide), wherein siRNA, shRNA and antisense oligonucleotides contain the nucleic acid sequence of exon 13L of the MADD splice variant and / or the exon 13L of the MADD splice variant mRNA transcripts (complementary) nucleic acid sequences. The present invention includes a method of treating cancer, which includes a combination therapy of a nucleic acid molecule capable of down- regulating the expression of at least one splice variant of the IG20 gene and an anthracycline chemotherapeutic.

IG20 基因在癌細胞增生、凋亡及生存中扮演重要的角色(Chow VT, Lee SS.(1996). DNA Seq 6: 263-273, Chow VT, Lim KM, Lim D.(1998). Genome 41: 543-552; Schievella AR, Chen JH, Graham JR, Lin LL.(1997). J Biol Chem 272: 12069-12075; Brinkman BM, Telliez JB, Schievella AR, Lin LL, Goldfeld AE.(1999). J Biol Chem 274: 30882-30886; Murakami-Mori K, Mori S, Bonavida B, Nakamura S.(1999). J Immunol 162: 3672-3679; Telliez JB, Bean KM, Lin LL.(2000). Biochem Biophys Acta 1478: 280-288; Al-Zoubi AM, Efimova EV, Kaithamana S, Martinez O, El-Idrissi ME, Dogan RE et al.(2001). J Biol Chem 276: 47202-47211; Lim KM, Chow VT.(2002). Mol Carcinog 35: 110-126; Efimova EV, Al-Zoubi AM, Martinez O, Kaithamana S, Lu SF, Arima T et al.(2004). Oncogene 23: 1076-1087; Efimova EV, Martinez O, Lokshin A, Arima T, Prabhakar BS.(2003). Cancer Res 63: 8768-8776; Lim KM, Yeo WS, Chow VT.(2004). Int J Cancer 109: 24-37; Ramaswamy M, Efimova EV, Martinez O, Mulherkar NU, Singh SP, Prabhakar BS.(2004). Oncogene 23: 6083-6094)。另外,其在神經傳遞(Zhang Y, Zhou L, Miller CA.(1998). Proc Natl Acad Sci USA 95: 2586-2591; Tanaka M, Miyoshi J, Ishizaki H, Togawa A, Ohnishi K, Endo K et al.(2001). Mol Biol Cell 12: 1421-1430; Yamaguchi K, Tanaka M, Mizoguchi A, Hirata Y, Ishizaki H, Kaneko K et al.(2002). Proc Natl Acad Sci USA 99: 14536-14541)、神經退化(Del Villar K, Miller CA.(2004). Proc Natl Acad Sci USA 101: 4210-4215)及鳥嘌呤核苷酸交換(guanine nucleotide exchange)(Wada M, Nakanishi H, Satoh A, Hirano H, Obaishi H, Matsuura Y et al.(1997). J Biol Chem 272: 3875-3878; Brown TL, Howe PH.(1998). Curr Biol 8: R191; Iwasaki K, Toyonaga R.(2000). EMBO J 19: 4806-4816; Levivier E, Goud B, Souchet M, Calmels TP, Mornon JP, Callebaut I.(2001). Biochem Biophys Res Commun 287:688-695)中扮演重要的角色。該等分歧的功能最有可能通過IG20 基因之選擇性剪接(alternative splicing)而介導以提供剪接變異體及蛋白質多樣性(Chow VT, Lim KM, Lim D.(1998). Genome 41: 543-552; Al-Zoubi AM, Efimova EV, Kaithamana S, Martinez O, El-Idrissi ME, Dogan RE et al.(2001). J Biol Chem 276: 47202-47211; Efimova EV, Al-Zoubi AM, Martinez O, Kaithamana S, Lu, SF, Arima T et al.(2004). Oncogene 23: 1076-1087)。使用反義寡核苷酸,所有內源性(endogenous)IG20 剪接變異體之調降,顯示於試管內(in vitro )及活體內(in vivo )導致癌細胞的自發性凋亡 但在正常細胞中則不然(Lim KM, Chow VT.(2002). Mol Carcinog 35: 110-126; Lim KM, Yeo WS, Chow VT.(2004). Int J Cancer 109: 24-37)。 IG20 gene plays an important role in cancer cell proliferation, apoptosis and survival (Chow VT, Lee SS. (1996). DNA Seq 6: 263-273, Chow VT, Lim KM, Lim D. (1998). Genome 41 : 543-552; Schievella AR, Chen JH, Graham JR, Lin LL. (1997). J Biol Chem 272: 12069-12075; Brinkman BM, Telliez JB, Schievella AR, Lin LL, Goldfeld AE. (1999). J Biol Chem 274: 30882-30886; Murakami-Mori K, Mori S, Bonavida B, Nakamura S. (1999). J Immunol 162: 3672-3679; Telliez JB, Bean KM, Lin LL. (2000). Biochem Biophys Acta 1478: 280-288; Al-Zoubi AM, Efimova EV, Kaithamana S, Martinez O, El-Idrissi ME, Dogan RE et al. (2001). J Biol Chem 276: 47202-47211; Lim KM, Chow VT. 2002). Mol Carcinog 35: 110-126; Efimova EV, Al-Zoubi AM, Martinez O, Kaithamana S, Lu SF, Arima T et al. (2004). Oncogene 23: 1076-1087; Efimova EV, Martinez O, Lokshin A, Arima T, Prabhakar BS. (2003). Cancer Res 63: 8768-8776; Lim KM, Yeo WS, Chow VT. (2004). Int J Cancer 109: 24-37; Ramaswamy M, Efimova EV, Martinez O, Mulherkar NU, Singh SP, Prabhakar BS. (2004). Oncogene 23: 6083-6094). In addition, its neurotransmission (Zhang Y, Zhou L, Miller CA. (1998). Proc Natl Acad Sci USA 95: 2586-2591; Tanaka M, Miyoshi J, Ishizaki H, Togawa A, Ohnishi K, Endo K et al . (2001). Mol Biol Cell 12: 1421-1430; Yamaguchi K, Tanaka M, Mizoguchi A, Hirata Y, Ishizaki H, Kaneko K et al. (2002). Proc Natl Acad Sci USA 99: 14536-14541), Neurodegeneration (Del Villar K, Miller CA. (2004). Proc Natl Acad Sci USA 101: 4210-4215) and guanine nucleotide exchange (Wada M, Nakanishi H, Satoh A, Hirano H, Obaishi H, Matsuura Y et al. (1997). J Biol Chem 272: 3875-3878; Brown TL, Howe PH. (1998). Curr Biol 8: R191; Iwasaki K, Toyonaga R. (2000). EMBO J 19 : 4806-4816; Levivier E, Goud B, Souchet M, Calmels TP, Mornon JP, Callebaut I. (2001). Biochem Biophys Res Commun 287: 688-695) plays an important role. These divergent functions are most likely to be mediated by alternative splicing of the IG20 gene to provide splice variants and protein diversity (Chow VT, Lim KM, Lim D. (1998). Genome 41: 543- 552; Al-Zoubi AM, Efimova EV, Kaithamana S, Martinez O, El-Idrissi ME, Dogan RE et al. (2001). J Biol Chem 276: 47202-47211; Efimova EV, Al-Zoubi AM, Martinez O, Kaithamana S, Lu, SF, Arima T et al. (2004). Oncogene 23: 1076-1087). Using antisense oligonucleotides, all endogenous IG20 splice variants are down-regulated, showing spontaneous apoptosis of cancer cells in vitro and in vivo , but normal This is not the case in cells (Lim KM, Chow VT. (2002). Mol Carcinog 35: 110-126; Lim KM, Yeo WS, Chow VT. (2004). Int J Cancer 109: 24-37).

美國專利案號8,722,637說明〝IG20和IG20-[SV2]及先前報導之KIAA0358、MADD和DENN-SV為IG20 基因(位於染色體11p11且由36個外顯子所組成)之剪接變異體。上述變異體間的差別係由於外顯子13L、16、21、26及34之選擇性剪接〞。可考慮於下列文章中說明的IG20、MADD、SV2及DENN-SV同型異構體:Contrasting Effects of IG20 and Its Splice Isoforms, MADD and DENN-SV, on Tumor Necrosis Factor α-induced Apoptosis and Activation of Caspase-8 and -3, Adeeb M. Al-Zoubi, Elena V. Efimova, Shashi Kaithamana, Osvaldo Martinez, Mohammed El-Azami El-Idrissi, Rukiye E. Dogan, and Bellur S. Prabhakar, THE JOURNAL OF BIOLOGICAL CHEMISTRY, Vol. 276, No. 50, Issue of December 14, pp. 47202-47211, 2001。US Patent No. 8,722,637 states that "IG20 and IG20- [SV2] and the previously reported KIAA0358, MADD, and DENN-SV are splice variants of the IG20 gene (located on chromosome 11p11 and composed of 36 exons). The above variants The difference is due to the alternative splicing of exons 13L, 16, 21, 26 and 34. " Consider the IG20, MADD, SV2 and DENN-SV isomers described in the following articles: Contrasting Effects of IG20 and Its Splice Isoforms, MADD and DENN-SV, on Tumor Necrosis Factor α-induced Apoptosis and Activation of Caspase- 8 and -3, Adeeb M. Al-Zoubi, Elena V. Efimova, Shashi Kaithamana, Osvaldo Martinez, Mohammed El-Azami El-Idrissi, Rukiye E. Dogan, and Bellur S. Prabhakar, THE JOURNAL OF BIOLOGICAL CHEMISTRY, Vol. 276, No. 50, Issue of December 14, pp. 47202-47211, 2001.

在Al-Zoubi等人的揭示之後,鑑定出更長的同型異構體(isoform),包括KIAA0358。因此,由Al-Zoubi等人鑑定為IG20之IG20 剪接變異體被稱為IG20pa,因為根據’637專利解釋,IG20表現蛋白質為促凋亡傳訊分子(pro-apoptotic signaling molecule),其不同於IG20-FL或全長變異體。(第5欄,第43-45行)。Following the disclosure by Al-Zoubi et al., Longer isoforms were identified, including KIAA0358. Therefore, the IG20 splice variant identified as IG20 by Al-Zoubi et al. Is called IG20pa, because according to the '637 patent interpretation, IG20 behaves as a pro-apoptotic signaling molecule, which is different from IG20- FL or full-length variants. (Column 5, lines 43-45).

Efimova 說明〝迄今鑑定之IG20的全部七種變異體皆源於外顯子13L、16、21、26及34之選擇性剪接。IG20之全長cDNA(IG20-FL)(存取編號(accession number)AF440100)為5995個鹼基對(bp)長度,由全部36個外顯子所組成且代表最長的變異體。Elena V. Efimova,et al ., IG20, in contrast to DENN-SV,(MADD splice variants)suppresses tumor cell survival, and enhances their susceptibility to apoptosis and cancer drugs, Oncogene (2004)23, 1076-1087。該等剪接變異體可以圖形表示如圖1。僅剪接(splicing)外顯子34產生由5942個bp所組成之KIAA0358(存取編號AB002356)。外顯子21和26之剪接及外顯子16、21和26之剪接分別產生5878個bp長度的IG20(存取編號AF440101)及6002個bp長度的MADD(存取編號U77352)。MADD亦稱為DENN(存取編號U44953),其為5844個bp長度。外顯子13L、21和26,及13L、16、21和26之剪接產生5749個bp長度的IG20-SV2(存取編號AF440102)及5689個bp長度的IG20-SV3(存取編號AF440103)(更早稱為DENN-SV)。最後,全部五種外顯子(13L、16、21、26和34)之剪接產生IG20-SV4(存取編號AF440434),其為最短的變異體且由5619個bp所組成〞。Efimova stated that "all seven variants of IG20 identified so far are derived from the alternative splicing of exons 13L, 16, 21, 26, and 34. The full-length cDNA of IG20 (IG20-FL) (accession number) AF440100) is 5,995 base pairs (bp) in length, composed of all 36 exons and represents the longest variant. Elena V. Efimova, et al ., IG20, in contrast to DENN-SV, (MADD splice variants) suppresses tumor cell survival, and enhances their susceptibility to apoptosis and cancer drugs, Oncogene (2004) 23, 1076-1087. These splicing variants can be represented graphically as shown in Figure 1. Only splicing exon 34 is generated by KIAA0358 (access number AB002356) composed of 5942 bp. The splicing of exons 21 and 26 and the splicing of exons 16, 21 and 26 respectively produced 5878 bp length of IG20 (access number AF440101) and 6002 bp length of MADD (access number U77352). MADD is also known as DENN (access number U44953), which is 5844 bp length. Exons 13L, 21 and 26, and 13L, 16, 21 and 26 are generated by splicing 5749 bp length IG20-SV2 (access number AF440102) and 5689 bp length IG20-SV3 (storage Number AF440103) (earlier called DENN-SV). Finally, splicing of all five exons (13L, 16, 21, 26, and 34) produced IG20-SV4 (access number AF440434), which is the shortest variation It consists of 5619 bps.

圖1係以圖展示由選擇性mRNA剪接(alternative mRNA splicing)所產生之人類IG20剪接變異體。顯示在七種IG20 剪接變異體間的cDNA序列同源性(sequence homology)。實心長條代表在所有變異體之間完全同源性(complete homology)區域。空的區域表示外顯子13L、16、21、26和34,其在以不同的組合剪接時,得到如左側所示的七種剪接變異體。在KIAA0358及IG20-SV4中,外顯子34之剪接導致在外顯子35提早終止密碼子(early stop codon)。亦顯示不同的剪接變異體之不同的5’非轉譯區(UTR)。FIG. 1 is a diagram showing human IG20 splicing variants generated by alternative mRNA splicing. CDNA sequence homology among seven IG20 splice variants is shown. The solid bars represent regions of complete homology among all variants. The empty regions represent exons 13L, 16, 21, 26, and 34, which, when spliced in different combinations, resulted in seven splice variants as shown on the left. In KIAA0358 and IG20-SV4, splicing of exon 34 leads to an early stop codon at exon 35. It also shows the different 5 'untranslated regions (UTR) of different splice variants.

’637專利所述發明之時,確定IG20pa、MADD、IG20-SV2及DENN-SV係表現在人類組織中且更大程度表現在腫瘤中。’637的第5欄第1至2行。DENN-SV的過度表現係與化學療法引起之提高的細胞複製及凋亡抗性相關聯。’637的第5欄第4至6行。IG20pa的過度表現顯示出壓制內源性DENN-SV功能,導致凋亡。’637的第5欄第16至17行。At the time of the invention described in the '637 patent, it was determined that the IG20pa, MADD, IG20-SV2 and DENN-SV lines were expressed in human tissues and to a greater extent in tumors. ’637, column 5, lines 1 to 2. The overexpression of DENN-SV is associated with increased cell replication and apoptosis resistance caused by chemotherapy. ’637, column 5, lines 4 to 6. Overexpression of IG20pa has been shown to suppress endogenous DENN-SV function, leading to apoptosis. ’637, column 5, lines 16 to 17.

通過在’637專利中所執行的實驗,確定〝因為DENN-SV缺少外顯子13L和16二者、MADD缺少外顯子16、IG20-SV2缺少外顯子13L,所以該等結果證實外顯子13L和16二者的表現(如IG20[pa]中所見)為抗增生(anti-proliferative)及促凋亡(pro-apoptotic)性質所需,而兩外顯子的缺失(如DENN-SV中所見)為促增生及抗凋亡性質所需〞。’637的第17欄第38至44行。最後,’637專利結論〝有明確的證據示意IG20[pa]及DENN-SV對凋亡及細胞增生具有不同作用〞。’637的第18欄第37至39行。其進一步結論〝IG20[pa]為促凋亡蛋白質(pro-apoptotic protein),其可與DR4及DR5交互作用且藉由促進DISC形成(增加FADD及半胱天冬酶-8(caspase-8)募集)而顯著地提高TRAIL誘導之凋亡〞。’637的第23欄第1至4行。最後,結論為〝IG20[pa]可使得細胞更易凋亡且抑制細胞生長。這提升使用IG20[pa]的可能性,以使有抗性的細胞變得更易接受各種方式的癌症療法〞。’637的第27欄第20至24行。Through experiments conducted in the '637 patent, it was determined that "because DENN-SV lacks both exons 13L and 16, MADD lacks exon 16, and IG20-SV2 lacks exon 13L, these results confirm the exon The performance of both exons 13L and 16 (as seen in IG20 [pa]) is required for anti-proliferative and pro-apoptotic properties, while the absence of two exons (such as DENN-SV Seen in) is required for proliferative and anti-apoptotic properties. " ’637, column 17, lines 38 to 44. Finally, the '637 patent concluded that "there is clear evidence that IG20 [pa] and DENN-SV have different effects on apoptosis and cell proliferation." ’637, column 18, lines 37 to 39. Its further conclusion "IG20 [pa] is a pro-apoptotic protein, which can interact with DR4 and DR5 and promote the formation of DISC (increasing FADD and caspase-8) Recruit) and significantly increase TRAIL-induced apoptosis. " ’637, column 23, lines 1 to 4. Finally, the conclusion is that "IG20 [pa] can make cells more prone to apoptosis and inhibit cell growth. This increases the possibility of using IG20 [pa] to make resistant cells more susceptible to various forms of cancer therapy. ’637, column 27, lines 20-24.

透過IG20 剪接變異體的過度表現之理解結果,結論為〝以IG20[pa]及DENN-SV轉染之細胞分別為最易有(susceptible to)及抵抗(resistant to)TNFα誘導之凋亡;而以MADD或IG20-SV2轉染之細胞,相對於以對照組質體所轉染之細胞,並未顯示顯著差異。因為DENN-SV缺少兩外顯子13L和16、MADD缺少外顯子16、IG20-SV2缺少外顯子13L,該等結果證實兩外顯子13L和16的表現(如在IG20[pa]中所見)為抗增生及促凋亡性質所需,而兩外顯子的缺失(如DENN-SV中所見)為促增生及抗凋亡性質所需〞。’637的第17欄第34至44行。Through the understanding of the over-expression of IG20 splice variants, the conclusion is that "cells transfected with IG20 [pa] and DENN-SV are the most susceptible to and resistant to TNFα-induced apoptosis, respectively; and Cells transfected with MADD or IG20-SV2 showed no significant difference compared to cells transfected with control plastids. Because DENN-SV lacked two exons 13L and 16, MADD lacked exon 16, IG20-SV2 lacks exon 13L. These results confirm that the performance of both exons 13L and 16 (as seen in IG20 [pa]) is required for anti-proliferative and pro-apoptotic properties, while the absence of both exons (As seen in DENN-SV) required for proliferative and anti-apoptotic properties. "'637, column 17, lines 34 to 44.

因此,在’637專利之前,並不瞭解IG20 剪接變異體表現的完整複雜性、不同的同型異構體在不同組織中的選擇性表現及剪接變異體之各者獨特的功能屬性。基於’637專利中所揭示對IG20 剪接變異體的過度表現之實驗,剪接變異體之任意的減弱(indiscriminant knock-down)之影響(不考慮在內含子(intron)16(MADD)、13L和16 (DENN-SV)、21和26(MADD、DENN-SV、IG20pa)及34(KIAA0358、IG20-SV4)之不同的剪接)能證明對動物的正常神經元功能和生存(即KIAA0358)、癌細胞生存(即MADD)及增生(即DENN-SV)極其重要。因此,專利係提供IG20 同型異構體之功能定性及解釋可選擇性調節各種同型異構體表現同時避免非所欲的致命結果之設計策略的複雜性。Therefore, before the '637 patent, we did not understand the complete complexity of the IG20 splice variant performance, the selective performance of different isoforms in different tissues, and the unique functional properties of each splice variant. Based on the over-expression experiments on the IG20 splice variant disclosed in the '637 patent, the effect of arbitrary indiscriminant knock-down of the splice variant (not considering intron 16 (MADD), 13L and 16 (DENN-SV), 21 and 26 (MADD, DENN-SV, IG20pa) and 34 (KIAA0358, IG20-SV4) different splicing) can prove the normal neuronal function and survival of animals (ie KIAA0358), cancer Cell survival (ie MADD) and hyperplasia (ie DENN-SV) are extremely important. Therefore, the patent provides the qualitative and functional interpretation of IG20 isoforms and the complexity of design strategies that can selectively adjust the performance of various isoforms while avoiding undesirable fatal outcomes.

IG20pa剪接變異體為促凋亡的(pro-apoptotic)、抗增生的(anti-proliferative),且使得細胞更易引發細胞死亡(即,腫瘤抑制劑)。IG20pa或其片段可過度表現以控制細胞增生、細胞週期,且使得細胞更易接受(susceptible to)化學療法(chemotherapy)、輻射療法(radiation therapy)或死亡受體介導之細胞死亡(death receptor mediated cell death)。IG20pa splice variants are pro-apoptotic, anti-proliferative, and make cells more prone to cell death (ie, tumor suppressors). IG20pa or its fragments can be over-expressed to control cell proliferation and cell cycle, and make the cells more susceptible to chemotherapy, radiation therapy or death receptor mediated cell death death).

可調降DENN-SV表現以降低細胞增生、影響細胞週期且增加對化學療法、輻射療法及死亡受體介導之細胞死亡的治療之易受性(susceptibility)。The performance of DENN-SV can be adjusted to reduce cell proliferation, affect the cell cycle, and increase susceptibility to chemotherapy, radiation therapy, and death receptor-mediated cell death treatment.

IG20pa及DENN-SV剪接變異體之差別表現(differential expression)分別使得細胞更易有(susceptible to)或抵抗(resistant to)誘發細胞死亡,且可利用IG20pa變異體之促凋亡性質使得有化學療劑抗性的腫瘤細胞變得易以TRAIL及/或化學療劑殺死。Differential expressions of IG20pa and DENN-SV splice variants make cells more susceptible to or resistant to induced cell death, respectively, and the pro-apoptotic properties of IG20pa variants can be used to make chemotherapeutic agents available The resistant tumor cells become easily killed by TRAIL and / or chemotherapeutic agents.

當IG20pa在細胞中過度表現時,細胞顯示顯著降低的增生且還更易自發性、TNFα、TRAIL誘導之凋亡。因此,可利用IG20pa剪接變異體之促凋亡性質使得具有抗性的腫瘤細胞變得易受TRAIL及/或化學療劑殺死。When IG20pa is over-expressed in cells, the cells show significantly reduced proliferation and are also more prone to spontaneous, TNFα, TRAIL-induced apoptosis. Therefore, the pro-apoptotic properties of the IG20pa splice variant can be used to make resistant tumor cells vulnerable to TRAIL and / or chemotherapeutic agents.

以siRNA調降IG20剪接變異體的表現係使用靶定具有序列(5’-GTACCAGCTTCAGTCTTTC-3’)的IG20 mRNA之中間區(Mid region)(尤其為外顯子15)的siRNA及靶定IG20 mRNA之死亡結構域(Death Domain)(DD)區的siRNA來評估。中間區及DD區二者係存在於所有的IG20 剪接變異體中。The use of siRNA to reduce the expression of IG20 splice variants uses siRNA targeting the middle region (especially exon 15) of IG20 mRNA with the sequence (5'-GTACCAGCTTCAGTCTTTC-3 ') and targeting IG20 mRNA SiRNA in the Death Domain (DD) region was evaluated. Both the middle region and the DD region are present in all IG20 splice variants.

以對IG20 mRNA之中間區但不對IG20 mRNA之死亡結構域(DD)的siRNA治療細胞,抑制了DENN-SV的量(完全廢除(completely abrogate))。以對IG20 mRNA之中間區(亦即外顯子15)的siRNA治療之細胞經歷自發性凋亡。而且,以對IG20 mRNA之中間區(亦即外顯子15)的siRNA治療之後未經歷自發性凋亡之細胞,更易受TNF-α誘導之凋亡。Treatment of cells with siRNA to the middle region of IG20 mRNA but not to the death domain (DD) of IG20 mRNA suppressed the amount of DENN-SV (completely abrogate). Cells treated with siRNA to the middle region of IG20 mRNA (ie, exon 15) experienced spontaneous apoptosis. Moreover, cells that did not undergo spontaneous apoptosis after treatment with siRNA to the middle region of IG20 mRNA (ie, exon 15) were more susceptible to TNF-α-induced apoptosis.

可結論,為了降低細胞複製,希望選擇siRNA以調降DENN-SV表現,尤其不影響IG20剪接變異體的表現,其為正常的細胞功能所需的,特別為神經元功能及生存(KIAA0358及IG20-SV4剪接變異體)。It can be concluded that in order to reduce cell replication, it is desirable to select siRNA to reduce the performance of DENN-SV, especially not to affect the performance of IG20 splice variants, which are required for normal cell function, especially neuronal function and survival (KIAA0358 and IG20 -SV4 splice variant).

而且,對比在許多例子中證明致命的先前技術之寡去氧核苷酸序列,考量’637專利的研究的寡去氧核苷酸可經最優化以結合在不同的同型異構體中有差別地表現之特別的外顯子。使用此等工程化寡去氧核苷酸(engineered oligodeoxynucleotide)之減弱(knockdown)可以僅減弱那些表現特別的靶定外顯子之同型異構體,使得能選擇性減弱所欲之同型異構體及降低與關鍵性同型異構體的減弱相關聯的非所欲之負面效應。Moreover, comparing the prior art oligodeoxynucleotide sequences that proved fatal in many examples, the oligodeoxynucleotides considered in the study of the '637 patent can be optimized to incorporate differences in different isoforms Special exons. Use of these engineered oligodeoxynucleotides (knockdown) can only weaken those isoforms that exhibit special targeting exons, allowing selective reduction of the desired isoform And reduce the undesirable negative effects associated with the weakening of key isoforms.

含Map激酶活化死亡结構域(MADD)蛋白質(IG20 基因之MADD剪接變異體的產物)為癌細胞生存不可或缺的。MADD係以更高的水平表現在癌細胞及組織中(相對於彼之正常的對應物)。已顯示MADD與死亡受體-4(DR4)及死亡受體-5(DR5)結合且賦予對甲狀腺癌、卵巢癌和子宮頸癌細胞株中的TRAIL誘導之凋亡的抗性(Mulherkar N, Prasad KV, Prabhakar BS, MADD/DENN splice variant of theIG20 gene is a negative regulator of caspase-8 activation. Knockdown enhances TRAIL-induced apoptosis of cancer cells, J Biol Chem 282: 11715-11721(2007); Subramanian M, Pilli T, Bhattacharya P, Pacini F, Nikiforov YE, et al., Knockdown ofIG20 gene expression renders thyroid cancer cells susceptible to apoptosis, J Clin Endocrinol Metab 94: 1467-1471(2009); Prabhakar BS, Mulherkar N, Prasad KV, Role of IG20 splice variants in TRAIL resistance,. Clin Cancer Res 14: 347-351(2008); Li LC, Jayaram S, Ganesh L, Qian L, Rotmensch J, et al., Knockdown of MADD and c-FLIP overcomes resistance to TRAIL-induced apoptosis in ovarian cancer cells, Am J Obstet Gynecol 205: 362 e312-325(2011))。Map kinase-activated death domain (MADD) protein ( product of the MADD splice variant of the IG20 gene) is essential for cancer cell survival. MADD is expressed at higher levels in cancer cells and tissues (relative to their normal counterparts). MADD has been shown to bind to death receptor-4 (DR4) and death receptor-5 (DR5) and confer resistance to TRAIL-induced apoptosis in thyroid cancer, ovarian cancer and cervical cancer cell lines (Mulherkar N, Prasad KV, Prabhakar BS, MADD / DENN splice variant of the IG20 gene is a negative regulator of caspase-8 activation. Knockdown enhances TRAIL-induced apoptosis of cancer cells, J Biol Chem 282: 11715-11721 (2007); Subramanian M, Pilli T, Bhattacharya P, Pacini F, Nikiforov YE, et al., Knockdown of IG20 gene expression renders thyroid cancer cells susceptible to apoptosis, J Clin Endocrinol Metab 94: 1467-1471 (2009); Prabhakar BS, Mulherkar N, Prasad KV, Role of IG20 splice variants in TRAIL resistance ,. Clin Cancer Res 14: 347-351 (2008); Li LC, Jayaram S, Ganesh L, Qian L, Rotmensch J, et al., Knockdown of MADD and c-FLIP overcomes resistance to TRAIL-induced apoptosis in ovarian cancer cells, Am J Obstet Gynecol 205: 362 e312-325 (2011)).

MADD(非其他的IG20 剪接變異體)之廢除(abrogation)可使得癌細胞更易受自發性以及TRAIL(腫瘤壞死因子相關性誘導凋亡配體(tumor necrosis factor-related apoptosis-inducing ligand))誘導之凋亡。在沒有MADD之細胞中的自發性以及TRAIL誘導之凋亡可藉由CrmA或顯性負FADD(dominant-negative FADD)的表現而抑制,由此示意內源性(endogenous)MADD可干擾半胱天冬酶-8活化。再者,頃發現MADD可直接與死亡受體(death receptor)交互作用,但不與半胱天冬酶-8或FADD交互作用,不過仍然抑制半胱天冬酶-8活化。已顯示MADD干擾FADD募集至死亡受體之細胞質結構域(cytoplasmic domain)( Mulherkar N, Prasad K and Prabhakar B, MADD/DENN Splice Variant of the IG20 Gene is a Negative Regulator of Caspase-8 Activation, Journal of Biological Chemistry, Vol. 282, no. 16, 11715-11721(2007)。這證實MADD在控制癌細胞生存/死亡及對經TRAIL誘導之凋亡賦予抗性的重要性。The abrogation of MADD (non-other IG20 splice variants) can make cancer cells more susceptible to spontaneous and TRAIL (tumor necrosis factor-related apoptosis-inducing ligand) induction Apoptosis. Spontaneous and TRAIL-induced apoptosis in cells without MADD can be inhibited by the expression of CrmA or dominant-negative FADD (dominant-negative FADD), thereby demonstrating that endogenous MADD can interfere with the caspase Asparaginase-8 is activated. Furthermore, it has been found that MADD can directly interact with death receptors, but not with caspase-8 or FADD, but still inhibits caspase-8 activation. It has been shown that MADD interferes with the cytoplasmic domain of FADD recruitment to death receptors (Mulherkar N, Prasad K and Prabhakar B, MADD / DENN Splice Variant of the IG20 Gene is a Negative Regulator of Caspase-8 Activation, Journal of Biological Chemistry, Vol. 282, no. 16, 11715-11721 (2007). This confirms the importance of MADD in controlling cancer cell survival / death and conferring resistance to TRAIL-induced apoptosis.

ERK(細胞外信號相關性激酶(extracellular signal-related kinase))途徑為癌症化學療法之藥物標靶,因為在所有人類癌症中約三分之一有失調的促分裂原活化蛋白激酶(mitogen-activated protein kinase)(MAPK)途徑,引起ERK活化。MAPK為絲胺酸/蘇胺酸特異性蛋白激酶,其響應於細胞外刺激物(促分裂原(mitogen))且調控細胞恆定所需的許多重要及關鍵的細胞功能,如代謝、細胞週期進程、細胞激素的表現、移動(motility)及黏附。因此,MAPK影響細胞生存、增生、分化、發展及凋亡。細胞外刺激物(諸如細胞激素、生長因子及環境應力)引起由MAPK所組成之傳訊級聯(signaling cascade)的相繼活化。The ERK (extracellular signal-related kinase) pathway is a drug target for cancer chemotherapy because about one third of all human cancers have dysregulated mitogen-activated protein kinase protein kinase) (MAPK) pathway, causing ERK activation. MAPK is a serine / threonine-specific protein kinase that responds to extracellular stimuli (mitogens) and regulates many important and critical cellular functions required for cell stability, such as metabolism, cell cycle progression , The performance, motility and adhesion of cytokines. Therefore, MAPK affects cell survival, proliferation, differentiation, development and apoptosis. Extracellular stimuli (such as cytokines, growth factors and environmental stresses) cause the successive activation of the signaling cascade composed of MAPK.

活化時,ERK1/2使涉及多種細胞過程的許多核及細胞質基質磷酸化,包括轉錄因子、傳訊蛋白(signaling protein)、激酶和磷酸酶、細胞支架蛋白(cytoskeletal protein)、凋亡蛋白及蛋白酶。儘管ERK途徑可由許多細胞外信號活化,但是使細胞激素及生長因子活化ERK傳訊的途徑係與癌症特別相關。例如,TNF-α(富集在腫瘤基質(tumor stroma)中的細胞激素)係與存在於癌細胞上的TNF受體1(TNFR1)結合且有效地活化ERK MAPK。在MADD不存在下,此促生存傳訊途徑(pro-survival signaling pathway)可能轉換成凋亡傳訊途徑,引起癌細胞死亡(Kurada BRVVSN, Li LC, Mulherkar N, Subramanian M, Prasad KV, Prabhakar BS, MADD, a Splice Variant ofIG20 , is Indispensable for MAPK Activation and Protection against Apoptosis upon Tumor Necrosis Factor-α Treatment,(2009), Journal of Biological Chemistry 284:13533-13541)。During activation, ERK1 / 2 phosphorylates many nuclear and cytoplasmic matrices involved in various cellular processes, including transcription factors, signaling proteins, kinases and phosphatases, cytoskeletal proteins, apoptotic proteins, and proteases. Although the ERK pathway can be activated by many extracellular signals, the pathway that signals cytokines and growth factors to activate ERK is particularly relevant to cancer. For example, the TNF-α (cytokine enriched in tumor stroma) system binds to TNF receptor 1 (TNFR1) present on cancer cells and effectively activates ERK MAPK. In the absence of MADD, this pro-survival signaling pathway may be converted into an apoptosis signaling pathway, causing cancer cell death (Kurada BRVVSN, Li LC, Mulherkar N, Subramanian M, Prasad KV, Prabhakar BS, MADD , a Splice Variant of IG20 , is Indispensable for MAPK Activation and Protection against Apoptosis upon Tumor Necrosis Factor-α Treatment, (2009), Journal of Biological Chemistry 284: 13533-13541).

外在細胞死亡誘導傳訊途徑(extrinsic cell death inducing signaling pathway)可在死亡配體(例如TRAIL)與其同源死亡受體(cognate death receptor)結合時引發。死亡受體經歷三聚合反應且募集FADD,導致後續的半胱天冬酶-8活化,接著執行者(executioner)半胱天冬酶-3(caspase-3)活化,導致凋亡(apoptosis)。TRAIL一般係與癌細胞的死亡受體-4(DR4)及死亡受體-5(DR5)結合,導致死亡受體(DR)寡聚合及後續FADD與半胱天冬酶原-8(procaspase-8)募集至DR(Bodmer JL, Holler N, Reynard S, Vinciguerra P, Schneider P, et al., TRAIL receptor-2 signals apoptosis through FADD and caspase-8, Nat Cell Biol 2: 241-243(2000); Sprick MR, Weigand MA, Rieser E, Rauch CT, Juo P, et al., FADD/MORT1 and caspase-8 are recruited to TRAIL receptors 1 and 2 and are essential for apoptosis mediated by TRAIL receptor 2, Immunity 12: 599-609(2000); Kischkel FC, Lawrence DA, Chuntharapai A, Schow P, Kim KJ, et al., Apo2L/TRAIL-dependent recruitment of endogenous FADD and caspase-8 to death receptors 4 and 5, Immunity 12: 611-620(2000))。半胱天冬酶原-8接著經歷鄰近誘導(proximity induced)之切割(cleavage)及活化以形成半胱天冬酶-8,其接著活化執行者半胱天冬酶-3,其造成凋亡性細胞死亡。然而,在MADD過度表現之癌細胞中,MADD係與DR4及DR5結合且阻止FADD募集至DR。在MADD調降時,FADD更易募集至DR,導致提高的凋亡(Mulherkar N, Prasad KV, Prabhakar BS, MADD/DENN splice variant of theIG20 gene is a negative regulator of caspase-8 activation. Knockdown enhances TRAIL-induced apoptosis of cancer cells, J Biol Chem 282: 11715-11721(2007); Mulherkar N, Ramaswamy M, Mordi DC, Prabhakar BS, MADD/DENN splice variant of theIG20 gene is necessary and sufficient for cancer cell survival, Oncogene 25: 6252-6261(2006))。The extrinsic cell death inducing signaling pathway can be triggered when a death ligand (such as TRAIL) binds to its cognate death receptor. The death receptor undergoes a trimerization reaction and recruits FADD, resulting in subsequent activation of caspase-8, followed by activation of caspase-3 by the executioner, leading to apoptosis. TRAIL generally binds to death receptor-4 (DR4) and death receptor-5 (DR5) of cancer cells, leading to oligomerization of death receptor (DR) and subsequent FADD and pro-caspase-8 (procaspase- 8) Recruited to DR (Bodmer JL, Holler N, Reynard S, Vinciguerra P, Schneider P, et al., TRAIL receptor-2 signals apoptosis through FADD and caspase-8, Nat Cell Biol 2: 241-243 (2000); Sprick MR, Weigand MA, Rieser E, Rauch CT, Juo P, et al., FADD / MORT1 and caspase-8 are recruited to TRAIL receptors 1 and 2 and are essential for apoptosis mediated by TRAIL receptor 2, Immunity 12: 599- 609 (2000); Kischkel FC, Lawrence DA, Chuntharapai A, Schow P, Kim KJ, et al., Apo2L / TRAIL-dependent recruitment of endogenous FADD and caspase-8 to death receptors 4 and 5, Immunity 12: 611-620 (2000)). Procaspase-8 then undergoes proximity induced cleavage and activation to form caspase-8, which in turn activates executor caspase-3, which causes apoptosis Sex cell death. However, in cancer cells where MADD is over-expressed, MADD binds to DR4 and DR5 and prevents FADD recruitment to DR. When MADD is reduced, FADD is more likely to be recruited to DR, leading to increased apoptosis (Mulherkar N, Prasad KV, Prabhakar BS, MADD / DENN splice variant of the IG20 gene is a negative regulator of caspase-8 activation. Knockdown enhances TRAIL- induced apoptosis of cancer cells, J Biol Chem 282: 11715-11721 (2007); Mulherkar N, Ramaswamy M, Mordi DC, Prabhakar BS, MADD / DENN splice variant of the IG20 gene is necessary and sufficient for cancer cell survival, Oncogene 25 : 6252-6261 (2006)).

TRAIL的獨特性在於其通常對正常的細胞或組織無不利的影響(Keane MM, Ettenberg SA, Nau MM, Russell EK, Lipkowitz S, Chemotherapy augments TRAIL-induced apoptosis in breast cell lines, Cancer Res 59: 734-741(1999))。然而,由於不同的抗凋亡蛋白的干擾,使化學療法的發展及TRAIL抗性仍有重大的挑戰。MADD為一種這樣的抗凋亡蛋白,證實MADD調降能用於使得癌細胞易細胞死亡(Mulherkar N, Ramaswamy M, Mordi DC, Prabhakar BS, MADD/DENN splice variant of the IG20 gene is necessary and sufficient for cancer cell survival, Oncogene 25: 6252-6261(2006))。The uniqueness of TRAIL is that it usually has no adverse effects on normal cells or tissues (Keane MM, Ettenberg SA, Nau MM, Russell EK, Lipkowitz S, Chemotherapy augments TRAIL-induced apoptosis in breast cell lines, Cancer Res 59: 734- 741 (1999)). However, due to the interference of different anti-apoptotic proteins, the development of chemotherapy and TRAIL resistance still pose significant challenges. MADD is one such anti-apoptotic protein, confirming that MADD downregulation can be used to make cancer cells prone to cell death (Mulherkar N, Ramaswamy M, Mordi DC, Prabhakar BS, MADD / DENN splice variant of the IG20 gene is necessary and sufficient for cancer cell survival, Oncogene 25: 6252-6261 (2006)).

取決於以Akt磷酸化,MADD可在調控凋亡上有雙重功能。腫瘤抑制劑PTEN(在染色體10上缺失的磷酸酶與張力蛋白同源物(tensin homolog))為負向調控磷脂醯肌醇3-激酶(phosphatidylinositol 3-kinase)(PI3K)-Akt傳訊途徑之脂質磷酸酶(lipid phosphatase)。當MADD之磷酸化被PTEM減弱時,MADD可充當為促凋亡因子(pro-apoptotic factor)以引發凋亡(Jayarama S, Li L, Ganesh L, Mardi D, Kanteti P, Hay N, Li P, and Prabhakar BS, J Cell Biochem. 2014, 115(2):261-270)。TRAIL誘導PTEN之調升伴隨降低的MADD磷酸化。PTEN之調降干擾TRAIL誘導之pMADD含量降低。未磷酸化之MADD係從細胞膜(plasma membrane)易位至細胞質,其在此與14-3-3蛋白質結合且置換14-3-3締合之Bax(14-3-3 associated Bax),該Bax易位至粒腺體,導致細胞色素-c釋放。總之,可結論出PTEN可藉由阻止Akt磷酸化MADD而傳達死亡信號。Depending on phosphorylation with Akt, MADD may have a dual function in regulating apoptosis. The tumor suppressor PTEN (phosphatase and tensin homolog deleted on chromosome 10) is a lipid that negatively regulates the phospholipid inositol 3-kinase (PI3K) -Akt signaling pathway Phosphatase (lipid phosphatase). When phosphorylation of MADD is attenuated by PTEM, MADD can act as a pro-apoptotic factor to induce apoptosis (Jayarama S, Li L, Ganesh L, Mardi D, Kanteti P, Hay N, Li P, and Prabhakar BS, J Cell Biochem. 2014, 115 (2): 261-270). TRAIL induces upregulation of PTEN with reduced MADD phosphorylation. The decrease in PTEN interferes with the TRAIL-induced decrease in pMADD content. Unphosphorylated MADD is translocated from the plasma membrane to the cytoplasm, where it binds to 14-3-3 protein and replaces 14-3-3 associated Bax (14-3-3 associated Bax), which Bax translocates to the mitochondria, resulting in the release of cytochrome-c. In conclusion, it can be concluded that PTEN can convey a death signal by preventing Akt from phosphorylating MADD.

外在凋亡途徑(extrinsic apoptotic pathway)可由磷酸化之MADD廢除。內源性MADD(Endogenous MADD)係在三個高度保留位點(highly conserved site)被Akt磷酸化,且僅磷酸化之MADD可與TRAIL受體DR4直接交互作用,由此防止FADD募集(recruitment)。然而,在易受(susceptible to)TRAIL處理的細胞中,TRAIL引發MADD磷酸化水平降低,導致MADD與DR4解離(dissociation)及FADD與DR4締合(association),這使得死亡誘導傳訊複合體(death-inducing signaling complex)(DISC)形成,導致凋亡(Li P, Jayarama S, Ganesh L, Mordi D, Carr R, Kanteti P, Hay N, and Prabhakar BS, J Biol Chem. 2010 July 16; 285(29): 22713-22722)。因此,MADD之促生存功能(pro-survival function)係取決於其被Akt所磷酸化。因為Akt在大多數癌細胞中具有活性且磷酸化之MADD賦予對TRAIL誘導之凋亡的抗性,所以共同靶定(co-targeting)Akt-MADD軸有可能增加涉及DR4/5結合之治療劑的功效,包括基於TRAIL之療法。The extrinsic apoptotic pathway can be abolished by phosphorylated MADD. Endogenous MADD (Endogenous MADD) is phosphorylated by Akt at three highly conserved sites, and only phosphorylated MADD can directly interact with the TRAIL receptor DR4, thereby preventing FADD recruitment (recruitment) . However, in cells that are susceptible to TRAIL, TRAIL triggers a decrease in MADD phosphorylation levels, resulting in the dissociation of MADD and DR4 and the association of FADD and DR4, which makes the death-inducing signaling complex (death) -inducing signaling complex) (DISC), leading to apoptosis (Li P, Jayarama S, Ganesh L, Mordi D, Carr R, Kanteti P, Hay N, and Prabhakar BS, J Biol Chem. 2010 July 16; 285 (29 ): 22713-22722). Therefore, the pro-survival function of MADD depends on its phosphorylation by Akt. Because Akt is active in most cancer cells and phosphorylated MADD confers resistance to TRAIL-induced apoptosis, co-targeting the Akt-MADD axis may increase therapeutic agents involving DR4 / 5 binding The efficacy, including TRAIL-based therapy.

當死亡信號引發粒腺體促凋亡蛋白(mitochondrial pro-apoptotic protein)(諸如細胞色素c)( Li P, Nijhawan D, Budihardjo I, Srinivasula SM, Ahmad M, Alnemri ES, Wang X. Cell, 1997; 91(4):479-489)、粒腺體凋亡誘導因子(mitochondrial apoptosis-inducing factor) ( Susin SA, Lorenzo HK, Zamzami N, Marzo I, Snow BE, Brothers GM, Mangion J, Jacotot E, Costantini P, Loeffler M, Larochette N, Goodlett DR, Aebersold R, Siderovski DP, Penninger JM, Kroemer G. Nature. 1999; 397(6718):441-446)及Smac/Diablo(Du C, Fang M, Li Y, Li L, Wang X. Cell. 2000; 102(1):33-42; Verhagen AM, Ekert PG, Pakusch M, Silke J, Connolly LM, Reid GE, Moritz RL, Simpson RJ, Vaux DL. Cell. 2000; 102(1):43-53)釋放時,引發內在凋亡途徑(intrinsic apoptotic pathway)。細胞色素-c與Apaf-1及半胱天冬酶原-9(procaspase-9)形成複合體,導致半胱天冬酶-9活化。Smac/Diablo可與凋亡蛋白抑制劑(Inhibitor of Apoptosis Protein)(IAP)締合及反抗(counteract)其半胱天冬酶抑制作用。內在途徑(intrinsic pathway)係由Bcl-2家族成員調控。例如,響應於促凋亡刺激物(pro-apoptotic stimuli),細胞溶質(cytosolic)Bax及Bad易位至粒腺體以滲透粒腺體外膜,導致細胞色素c釋放至細胞溶質中。相對之下,Bcl-2及Bcl-xL可與Bax及Bad締合,由此阻止彼等誘導死亡(Antignani A, Youle RJ. Curr Opin Cell Biol. 2006; 18(6):685-689)。有趣地,未磷酸化之MADD係從細胞膜易位至細胞質,其在此與14-3-3結合且置換14-3-3締合之Bax,其易位至粒腺體,導致細胞色素-c釋放(Jayarama S, Li L, Ganesh L, Mardi D, Kanteti P, Hay N, Li P, and Prabhakar BS, J Cell Biochem. 2014, 115(2):261-270)。When death signals trigger mitochondrial pro-apoptotic proteins (such as cytochrome c) (Li P, Nijhawan D, Budihardjo I, Srinivasula SM, Ahmad M, Alnemri ES, Wang X. Cell, 1997; 91 (4): 479-489), mitochondrial apoptosis-inducing factor (Susin SA, Lorenzo HK, Zamzami N, Marzo I, Snow BE, Brothers GM, Mangion J, Jacotot E, Costantini P, Loeffler M, Larochette N, Goodlett DR, Aebersold R, Siderovski DP, Penninger JM, Kroemer G. Nature. 1999; 397 (6718): 441-446) and Smac / Diablo (Du C, Fang M, Li Y, Li L, Wang X. Cell. 2000; 102 (1): 33-42; Verhagen AM, Ekert PG, Pakusch M, Silke J, Connolly LM, Reid GE, Moritz RL, Simpson RJ, Vaux DL. Cell. 2000; 102 (1): 43-53) When released, it triggers an intrinsic apoptotic pathway. Cytochrome-c forms a complex with Apaf-1 and procaspase-9, resulting in the activation of caspase-9. Smac / Diablo can associate with Inhibitor of Apoptosis Protein (IAP) and counteract its inhibitory effect on caspase. The intrinsic pathway is regulated by members of the Bcl-2 family. For example, in response to pro-apoptotic stimuli, cytosolic Bax and Bad translocate to the mitochondria to penetrate the outer membrane of the mitochondria, resulting in the release of cytochrome c into the cytosol. In contrast, Bcl-2 and Bcl-xL can associate with Bax and Bad, thereby preventing their induced death (Antignani A, Youle RJ. Curr Opin Cell Biol. 2006; 18 (6): 685-689). Interestingly, unphosphorylated MADD translocates from the cell membrane to the cytoplasm, where it binds to 14-3-3 and replaces the 14-3-3 associated Bax, which translocates to the mitochondria, resulting in cytochrome- c release (Jayarama S, Li L, Ganesh L, Mardi D, Kanteti P, Hay N, Li P, and Prabhakar BS, J Cell Biochem. 2014, 115 (2): 261-270).

MADD cDNA序列係可於GenBank數據庫以存取編號:NM_130470取得,在本文中以SEQ ID NO:11之核苷酸序列及SEQ ID NO:12之多肽序列代表。設計調降MADD之干擾RNA(包括siRNA、shRNA及反義寡核苷酸)以靶定IG20 基因之剪接變異體的外顯子13L之核酸序列,且包括MADD的任何對偶基因變異體(allelic variant)和天然生成突變體(naturally occurring mutant),及出現在可於特定的群體部分中發現之MADD剪接變異體中的多型性(polymorphism)。換言之,具有高相似性(例如於胺基酸水平為約95%、於核酸水平為約75%)及代表在MADD剪接變異體中的天然生成變異(naturally occurring variation)之序列係在本揭示內容之範圍內,其中本文所揭示之siRNA、shRNA及反義寡核苷酸能夠調降此等序列的表現。MADD剪接變異體的外顯子13L可包含以SEQ ID NO:11之核苷酸2699至2827代表的核苷酸序列。與本文所揭示之MADD序列在核酸水平上有約80%或90%或95%相似性的核酸序列亦可被調降。產生包含與IG20 基因之MADD剪接變異體的外顯子13L之核酸序列及/或MADD剪接變異體的外顯子13L之mRNA轉錄本互補的核酸序列、以及可出現在外顯子13L標靶區內的核酸變異之siRNA及shRNA的核酸序列係在本揭示內容之範圍內。而且,包含與IG20 基因之MADD剪接變異體的外顯子13L之核酸序列及/或MADD剪接變異體的外顯子13L之mRNA轉錄本互補的核酸序列、以及可出現在外顯子13L標靶區內的核酸變異之反義寡核苷酸係在本揭示內容之範圍內。The MADD cDNA sequence can be obtained from the GenBank database under the access code: NM_130470, and is represented by the nucleotide sequence of SEQ ID NO: 11 and the polypeptide sequence of SEQ ID NO: 12 herein. Designed to downgrade the interfering RNA of MADD (including siRNA, shRNA and antisense oligonucleotides) to target the nucleic acid sequence of exon 13L of the splice variant of the IG20 gene, and include any dual gene variant of MADD (allelic variant ) And naturally occurring mutants, and polymorphisms that occur in MADD splice variants that can be found in specific population parts. In other words, sequences with high similarity (eg, about 95% at the amino acid level and about 75% at the nucleic acid level) and representing naturally occurring variations in MADD splice variants are disclosed in this disclosure Within the scope, the siRNA, shRNA and antisense oligonucleotides disclosed herein can down-regulate the performance of these sequences. The exon 13L of the MADD splice variant may comprise the nucleotide sequence represented by nucleotides 2699 to 2827 of SEQ ID NO: 11. Nucleic acid sequences that are approximately 80%, 90%, or 95% similar to the MADD sequence disclosed herein at the nucleic acid level can also be downregulated. Generate nucleic acid sequences that are complementary to the nucleic acid sequence of exon 13L of the MADD splice variant of the IG20 gene and / or the mRNA transcript of exon 13L of the MADD splice variant, and can appear in the target region of exon 13L The nucleic acid sequences of siRNA and shRNA of nucleic acid variations are within the scope of the present disclosure. Furthermore, a nucleic acid sequence comprising a nucleic acid sequence complementary to the exon 13L of the MADD splice variant of the IG20 gene and / or an mRNA transcript of the exon 13L of the MADD splice variant, and may appear in the exon 13L target Antisense oligonucleotides with nucleic acid variations within are within the scope of this disclosure.

已顯示用於特異性調降IG20 基因之剪接變異體的表現之方法包括:(a)獲得能夠調降MADD表現之核酸分子,其中核酸分子或其轉錄產物能夠選擇性結合mRNA分子,mRNA分子包括IG20 基因之MADD剪接變異體的核酸序列;及(b)使表現IG20 基因之MADD剪接變異體的細胞與核酸分子接觸,其中,該核酸分子調降MADD剪接變異體的表現。在細胞質中,選自siRNA、表現之shRNA、及反義寡核苷酸之核酸係結合標靶外顯子13L mRNA,導致標靶13L mRNA降解(degradation),其調降MADD剪接變異體的表現。 Methods that have been shown to specifically reduce the expression of splice variants of the IG20 gene include: (a) obtaining a nucleic acid molecule capable of reducing the expression of MADD, wherein the nucleic acid molecule or its transcription product can selectively bind to an mRNA molecule, and the mRNA molecule includes The nucleic acid sequence of the MADD splice variant of the IG20 gene; and (b) contacting a cell expressing the MADD splice variant of the IG20 gene with a nucleic acid molecule, wherein the nucleic acid molecule reduces the performance of the MADD splice variant. In the cytoplasm, nucleic acids selected from siRNA, expressed shRNA, and antisense oligonucleotides bind to target exon 13L mRNA, resulting in target 13L mRNA degradation, which downgrades the performance of MADD splice variants .

具言之,已顯示調降MADD表現為實質性調降,例如超過90%或95%之內源性MADD表現降低。事實上,希望調降例如至少40%、至少50%、至少60%、至少70%、及至少80%之內源性MADD表現(endogenous MADD expression)。In other words, it has been shown that down-regulation of MADD is a substantial down-regulation, for example, over 90% or 95% of endogenous MADD performance is reduced. In fact, it is desirable to reduce, for example, at least 40%, at least 50%, at least 60%, at least 70%, and at least 80% of endogenous MADD expression.

選擇性調降IG20 基因之剪接變異體(其中,剪接變異體為MADD)的表現的分離之siRNA、shRNA及反義寡核苷酸揭示於美國專利案號7,910,723中。該專利說明選擇性調降IG20 基因之一或多種剪接變異體的〝剪接變異體特異性(splice variant specific)〞核酸分子之發展及彼等在癌細胞生存中的相對重要性。並非所有的癌細胞皆表現所有的IG20 剪接變異體且一些僅表現MADD及DENN剪接變異體。使用表現四種已知的剪接變異體或僅表現MADD及DENN剪接變異體之細胞以及選自特異性靶定(specifically target)外顯子13L(調降IG20pa和MADD)、外顯子16(調降IG20pa和IG20-SV2)和外顯子15(外顯子15係表現在IG20 基因的所有剪接變異體中,因此其可調降所有剪接變異體的表現)之shRNA、siRNA及反義寡核苷酸之不同的核酸分子,已證實對癌細胞生存而言MADD的關鍵需求。儘管靶定外顯子16之siRNA、shRNA及反義寡核苷酸可減弱IG20pa,但是僅靶定外顯子13L之siRNA、shRNA及反義寡核苷酸可造成癌細胞死亡。這最先表明MADD特別可能對癌細胞生存是關鍵的。顯示MADD為足以使癌細胞生存不可或缺的額外證據跡象係在以Mid-shRNA抗性IG20 剪接變異體轉染之細胞中證實,其中在cDNA構築體的Mid-shRNA靶定區域中的三重密碼子(triple codon)之第三個鹼基被置換,該DNA取代不改變胺基酸序列,但使得彼等抵抗Mid-shRNA。當所有的內源性IG20 剪接變異體的表現使用Mid-shRNA調降時,僅表現MADD剪接變異體之細胞可避免細胞死亡,而其他的剪接變異體無法避免細胞死亡。使用僅表現MADD及DENN-SV剪接變異體之癌細胞顯示可使用靶定外顯子13L之siRNA、shRNA或反義寡核苷酸選擇性地調降MADD,且顯示僅MADD便足以使癌細胞生存且為必需的(Mulherkar, N.,et al ., Oncogene 2006; 25:6252-61)。Isolated siRNA, shRNA and antisense oligonucleotides that selectively downregulate the splice variant of the IG20 gene (where the splice variant is MADD) are disclosed in US Patent No. 7,910,723. The patent describes the development of "splice variant specific" nucleic acid molecules that selectively down- regulate one or more splice variants of the IG20 gene and their relative importance in cancer cell survival. Not all cancer cells show all IG20 splice variants and some only show MADD and DENN splice variants. Use cells expressing four known splicing variants or only MADD and DENN splicing variants and specifically selected exon 13L (downregulated IG20pa and MADD), exon 16 (modulated ShRNA, siRNA, and antisense oligonucleosides of IG20pa and IG20-SV2) and exon 15 (exon 15 is expressed in all splice variants of the IG20 gene, so it can reduce the performance of all splice variants) The different nucleic acid molecules of glucuronides have confirmed the critical requirement of MADD for cancer cell survival. Although siRNA, shRNA and antisense oligonucleotides targeting exon 16 can attenuate IG20pa, only siRNA, shRNA and antisense oligonucleotides targeting exon 13L can cause cancer cell death. This first suggests that MADD may be particularly critical for cancer cell survival. Additional evidence showing that MADD is essential for the survival of cancer cells was confirmed in cells transfected with Mid-shRNA resistant IG20 splice variants, in which the triple code in the Mid-shRNA target region of the cDNA construct The third base of the triple codon is replaced. This DNA substitution does not change the amino acid sequence, but makes them resistant to Mid-shRNA. When the performance of all endogenous IG20 splice variants is down-regulated using Mid-shRNA, only cells expressing MADD splice variants can avoid cell death, while other splice variants cannot avoid cell death. The use of cancer cells expressing only MADD and DENN-SV splice variants shows that siRNA, shRNA or antisense oligonucleotides targeting exon 13L can be used to selectively reduce MADD, and that only MADD is sufficient for cancer cells Survival is essential (Mulherkar, N., et al ., Oncogene 2006; 25: 6252-61).

早期的研究未如此揭露IG20 基因表現的完整複雜性、剪接變異體在不同組織中的差別表現、剪接變異體之各者獨特的功能屬性(亦即癌細胞生存(MADD)及增生(DENN))。因此,各種剪接變異體、彼等的功能特徵及鑑定可選擇性調降剪接變異體的表現之特異性核酸分子的能力之發現能使發明者研發癌症療法而沒有非所欲的潛在負面結果。Earlier studies did not reveal the complete complexity of IG20 gene expression, the differential performance of splice variants in different tissues, and the unique functional properties of each splice variant (that is, cancer cell survival (MADD) and hyperplasia (DENN)) . Therefore, the discovery of various splice variants, their functional characteristics, and the ability to identify specific nucleic acid molecules that can selectively reduce the expression of splice variants can enable the inventors to develop cancer therapies without undesirable potential negative consequences.

美國專利案號7,910,723說明靶定IG20 基因的外顯子13L之核酸分子及經編碼之siRNA、shRNA及反義寡核苷酸在調降MADD蛋白質的表現之用途。該專利說明如何使核酸選擇可最優化以達成有效的MADD表現調降,包括選擇基本上由核苷酸序列CGGCGAATCTATGACAATC (SEQ ID NO:1)所組成之核酸分子及其轉錄產物、編碼基本上由核苷酸序列CGGCGAAUCUAUGACAAUC(SEQ ID NO:2)所組成之核酸分子。此策略之核酸分子種類代表包括siRNA、shRNA及反義寡核苷酸,其包含少於50%之GC核苷酸含量、朝向3’端的高AU核苷酸含量及在siRNA區域內沒有反轉的重複物(inverted repeat),該寡核苷酸構成可跨越外顯子13L核苷酸序列之核酸分子陣列。該等經編碼之核酸分子及經編碼之siRNA、shRNA及反義寡核苷酸經證實足以調降MADD剪接變異體的表現。可能出現在癌症類型的一或更多亞群中的MADD之天然變異(Natural variation)(包括特異性SNP、對偶基因變異體或突變)可以此等核酸分子靶定。US Patent No. 7,910,723 describes the use of nucleic acid molecules targeting the exon 13L of the IG20 gene and encoded siRNA, shRNA, and antisense oligonucleotides to down-regulate the performance of MADD protein. The patent describes how to optimize nucleic acid selection to achieve effective MADD performance reduction, including the selection of a nucleic acid molecule consisting essentially of the nucleotide sequence CGGCGAATCTATGACAATC (SEQ ID NO: 1) and its transcription product, encoding essentially by A nucleic acid molecule composed of the nucleotide sequence CGGCGAAUCUAUGACAAUC (SEQ ID NO: 2). The types of nucleic acid molecules in this strategy include siRNA, shRNA and antisense oligonucleotides, which contain less than 50% GC nucleotide content, high AU nucleotide content toward the 3 'end, and no inversion in the siRNA region Inverted repeat, this oligonucleotide constitutes an array of nucleic acid molecules that can span the 13L nucleotide sequence of exon. These encoded nucleic acid molecules and encoded siRNA, shRNA, and antisense oligonucleotides have been shown to be sufficient to down-regulate the performance of MADD splice variants. Natural variations of MADD (including specific SNPs, dual gene variants or mutations) that may occur in one or more subgroups of cancer types can be targeted by these nucleic acid molecules.

說明用於調降MADD的表現之方法,其包括:(a)獲得選擇性調降MADD表現之核酸分子,其中該核酸分子能夠選擇性結合IG20 基因之MADD剪接變異體的mRNA分子;及(b)使表現IG20 基因之MADD剪接變異體的癌細胞與核酸分子接觸,其中該核酸分子調降癌細胞中之MADD剪接變異體的表現。A method for reducing the performance of MADD is described, which includes: (a) obtaining a nucleic acid molecule that selectively reduces the performance of MADD, wherein the nucleic acid molecule can selectively bind to the mRNA molecule of the MADD splice variant of the IG20 gene; and (b ) Contacting a cancer cell expressing the MADD splice variant of the IG20 gene with a nucleic acid molecule, wherein the nucleic acid molecule downregulates the performance of the MADD splice variant in cancer cells.

再者,顯示出調降IG20 之MADD剪接變異體、其對偶基因變異、其多型性和其基因突變的代表性核酸分子包括siRNA、shRNA及反義核酸分子,其可包含核苷酸序列CGGCGAAUCUAUGACAAUC(SEQ ID NO:2)。siRNA可與同源反義核酸呈雙鏈(duplex)形式,該同源反義核酸(cognate antisense nucleic acid)係與標靶(target)MADD外顯子13L核苷酸序列及/或MADD外顯子13L之mRNA轉錄本互補。Furthermore, representative nucleic acid molecules showing MADD splicing variants that downregulate IG20 , their dual gene variants, their polymorphisms, and their gene mutations include siRNA, shRNA, and antisense nucleic acid molecules, which may include the nucleotide sequence CGGCGAAUCUAUGACAAUC (SEQ ID NO: 2). The siRNA can be in the form of a duplex with homologous antisense nucleic acid. The homologous antisense nucleic acid (cognate antisense nucleic acid) is exon 13L nucleotide sequence and / or MADD exon of the target MADD The 13L mRNA transcript is complementary.

IG20 基因之特異性剪接變異體的調降是困難的,因為非常短的標靶序列(其在不同的剪接變異體中有差別表現(differentially express))。美國專利案號7,910,723在發明的實施態樣中解釋可通過使用特別設計之短髮夾RNA分子(shRNA)達成調降。短髮夾RNA(shRNA)包含以環圈結構(loop structure)連結之標靶基因的互補(complementary)正義(sense)及反義(antisense)序列。dsDNA可選殖至用於轉染之表現載體中,接著可轉錄以形成shRNA,shRNA係切割成siRNA,其可透過RNA干擾(RNA interference)(RNAi)而抑制基因表現。在一實施態樣中,編碼此shRNA之核酸包括下列結構:   X正義 - 髮夾環圈 - X反義 ,   其中,X(編碼siRNA)包括或基本上由具有序列 CGGCGAATCTATGACAATC(SEQ ID NO:1)之核酸所組成。核酸經轉錄以形成shRNA且可切割以形成siRNA,其最終可抑制MADD表現。因此,亦包括於試管內(in vitro )或活體內(in vivo )(例如於癌細胞或腫瘤內)轉錄以形成shRNA及siRNA之RNA分子。 The down-regulation of specific splice variants of the IG20 gene is difficult because of the very short target sequence (which differs differentially among different splice variants). US Patent No. 7,910,723 explained in the implementation of the invention that downregulation can be achieved by using specially designed short hairpin RNA molecules (shRNA). Short hairpin RNA (shRNA) contains complementary sense and antisense sequences of target genes linked by a loop structure. dsDNA can be cloned into the expression vector for transfection, and then can be transcribed to form shRNA, which is cleaved into siRNA, which can inhibit gene expression through RNA interference (RNAi). In one embodiment, the nucleic acid encoding the shRNA includes the following structure: X sense -hairpin loop-X antisense , wherein X (encoding siRNA) includes or consists essentially of the sequence CGGCGAATCTATGACAATC (SEQ ID NO: 1) Composed of nucleic acids. The nucleic acid is transcribed to form shRNA and can be cleaved to form siRNA, which can ultimately inhibit MADD performance. Therefore, RNA molecules that are transcribed in a test tube ( in vitro ) or in vivo (for example, in a cancer cell or tumor) to form shRNA and siRNA are also included.

編碼抑制MADD表現之shRNA的例示性dsDNA核酸序列可為CGGCGAATCTATGACAATCTTCAA GAGAGATTGTCATAGATTCGCCG(SEQ ID NO:3),其中,在X正義 與X反義 之間的髮夾環圈區係自序列的位置20至28。髮夾環圈區可含有任何適合的序列。關於構築(construct) shRNA載體,參見McIntyre and Fanning, Design and cloning strategies for constructing shRNA expression vectors, BMC Biotechnol. 2006; 6: 1(2006),其整體以引用方式併入本文。Encoding shRNA MADD inhibiting expression of dsDNA Exemplary nucleic acid sequences may be CGGCGAATCTATGACAATCTTCAA GAGAGATTGTCATAGATTCGCCG (SEQ ID NO: 3 ), wherein, in the hairpin loop region between X and sense lines from the X position of the antisense sequence 20-28. The hairpin loop zone can contain any suitable sequence. For constructing shRNA vectors, see McIntyre and Fanning, Design and cloning strategies for constructing shRNA expression vectors, BMC Biotechnol. 2006; 6: 1 (2006), the entirety of which is incorporated herein by reference.

在一實施態樣中,雙股型RNA或dsRNA係指匹配預定的基因序列之雙股型RNA,其能夠活化降解對應的基因信使RNA轉錄本的細胞酵素。該等dsRNA包含可為短干擾RNA(siRNA)且可用於抑制基因表現的核酸分子。如本文所使用的術語〝雙股型RNA(double stranded RNA)〞或〝dsRNA〞係指能夠RNA干擾(〝RNAi〞)的雙股型RNA分子,包括短干擾RNA(short interfering RNA)(〝siRNA〞)。In one embodiment, the double-stranded RNA or dsRNA refers to a double-stranded RNA that matches a predetermined gene sequence, which can activate and degrade the cell enzyme of the corresponding gene messenger RNA transcript. The dsRNA includes nucleic acid molecules that can be short interfering RNA (siRNA) and can be used to suppress gene expression. The term "double stranded RNA" or "dsRNA" as used herein refers to a double-stranded RNA molecule capable of RNA interference ("RNAi"), including short interfering RNA ("siRNA" ").

如本文所述之siRNA、shRNA及反義寡核苷酸分子亦可包括本領域中已知的核酸修飾以提高標靶mRNA的穩定性及提高切割破壞。關於具體的核酸分子,代表性實例可包含19個鹼基核心(19-base core),其包括2或3個核苷酸突出的3’末端,諸如3’端胸腺嘧啶(TT)。突出端(overhang)可扮演使RISC呈現對稱雙鏈的結構角色。時常選擇dTdT,因為其可對核酸分子賦予核酸酶抗性(nuclease resistance)。雖然如此,一些研究員仍偏好UU突出端或與真實的(authentic)mRNA標靶互補的突出端。最重要的是核酸分子的19個鹼基核心本質朝向獨特的mRNA標靶。SiRNA, shRNA, and antisense oligonucleotide molecules as described herein can also include nucleic acid modifications known in the art to increase the stability of target mRNA and increase cleavage disruption. Regarding a specific nucleic acid molecule, a representative example may include a 19-base core including 2 or 3 nucleotide overhanging 3 'ends, such as 3' terminal thymine (TT). The overhang can play a structural role that makes RISC appear symmetrical double-stranded. DTdT is often selected because it can impart nuclease resistance to nucleic acid molecules. Nevertheless, some researchers still prefer UU overhangs or overhangs that are complementary to authentic mRNA targets. The most important thing is that the 19-base core essence of the nucleic acid molecule is toward a unique mRNA target.

siRNA、shRNA及反義寡核苷酸分子亦可全程化學合成(chemically synthesizedde novo )。合成之核酸分子可呈單股核酸分子的形式或可與同源反義核酸分子呈雙鏈的形式。siRNA、shRNA及反義寡核苷酸包含與標靶MADD外顯子13L核苷酸序列及/或MADD外顯子13L之mRNA轉錄本互補的核酸序列。siRNA, shRNA and antisense oligonucleotide molecules can also be chemically synthesized de novo . The synthesized nucleic acid molecule may be in the form of a single-stranded nucleic acid molecule or may be in a double-stranded form with a homologous antisense nucleic acid molecule. siRNA, shRNA, and antisense oligonucleotides include nucleic acid sequences that are complementary to the target MADD exon 13L nucleotide sequence and / or MADD exon 13L mRNA transcript.

RNA干擾(RNA interference)為在大部分真核生物中發現的保守途徑,其中,雙股RNA(dsRNA)調降具有互補序列之基因的表現。長的dsRNA係被核糖核酸內切酶(endoribonuclease)切丁酶(Dicer)降解成小的效應分子(effector molecule),稱為siRNA(小干擾RNA(small interfering RNA))。siRNA通常為約21個鹼基對(bp)長度,具有中心19個bp雙鏈及2個鹼基3’-突出端(這可為TT)( Elbashir, SM, Lendeckel W and Tuschl T, RNA interference is mediated by 21- and 23-nucleotide RNAs, Genes & Development, 2001, 15:188-200)。在哺乳動物中,切丁酶加工(Dicer processing)係發生在具有RNA-結合蛋白(RNA -binding protein)TRBP的多蛋白複合體(multiprotein complex)中。新生(nascent)siRNA係與切丁酶、TRBP及阿爾古2(Argonaute 2)(Ago2)締合以形成RNA誘導之靜默複合體(RNA -Induced Silencing Complex) (RISC)。一旦進入RISC,則siRNA的一股(隨從股(passenger strand)/具有與標靶mRNA相同序列的股)被降解或丟棄,而另一股(引導股(guide strand)/與靶定之mRNA互補的股)續留以指引靜默複合體之序列特異性。RISC之Ago2組份為核糖核酸酶,其在引導股的指引下切割標靶RNA。一旦RISC複合體活化,其可繼續靶向其他的mRNA標靶。此效應擴大基因靜默(gene silencing)且能使治療效果在快速分裂的細胞中持續3至7天。許多研究員目前使用合成的RNA雙鏈作為彼等的RNAi試劑,其模擬由長受質RNA(long substrate RNA)之切丁酶加工所得之天然siRNA。該等合成的siRNA雙鏈係轉染至細胞株中,彼等在此模擬活體內切丁酶產物。RNA interference is a conservative pathway found in most eukaryotes, where double-stranded RNA (dsRNA) down-regulates the performance of genes with complementary sequences. The long dsRNA is degraded by endoribonuclease (Dicer) into a small effector molecule (effector molecule), called siRNA (small interfering RNA). siRNA is usually about 21 base pairs (bp) long, with a center 19 bp double strand and 2 base 3'-overhangs (this can be TT) (Elbashir, SM, Lendeckel W and Tuschl T, RNA interference is mediated by 21- and 23-nucleotide RNAs, Genes & Development, 2001, 15: 188-200). In mammals, Dicer processing occurs in a multiprotein complex with RNA-binding protein TRBP. Nascent siRNA is associated with Dicer, TRBP and Argonaute 2 (Ago2) to form RNA-Induced Silencing Complex (RISC). Once in the RISC, one strand of siRNA (passenger strand / strand having the same sequence as the target mRNA) is degraded or discarded, while the other strand (guide strand (guide strand) / complementary to the targeted mRNA) Shares) to continue to guide the sequence specificity of the silent complex. The Ago2 component of RISC is ribonuclease, which cleaves the target RNA under the guidance of the guide strand. Once the RISC complex is activated, it can continue to target other mRNA targets. This effect expands gene silencing and enables therapeutic effects to persist in rapidly dividing cells for 3 to 7 days. Many researchers currently use synthetic RNA double-strands as their RNAi reagents, which mimic natural siRNA processed by the dicase of long substrate RNA. These synthetic siRNA double-stranded lines are transfected into cell lines, where they mimic the Dicer product in vivo.

利用siRNA、shRNA或反義寡核苷酸調節MADD表現及/或調降MADD表現可增強傳統的癌症療法。The use of siRNA, shRNA, or antisense oligonucleotides to modulate MADD performance and / or reduce MADD performance can enhance traditional cancer therapy.

從化學療劑的觀點,癌症化學療法於近年來已顯著地進步。已鑑定許多有效治療癌症的癌症化學治療物質。雖然如此,許多癌症化學療法的特徵仍為投予特定的化學療劑時常遭遇的毒性副作用。From the point of view of chemotherapeutics, cancer chemotherapy has progressed significantly in recent years. Many cancer chemotherapeutic substances that have been effective in treating cancer have been identified. Nonetheless, many cancer chemotherapies are characterized by the toxic side effects often encountered when administering specific chemotherapeutic agents.

例如,已熟知許多經確立之化學療劑的投予導致不想要的副作用,包括噁心和嘔吐、食慾不振、味覺變化、頭髮稀少或變脆、關節疼痛,指甲變型、及手或腳趾刺痛。亦可能發生更嚴重的副作用,諸如排便困難、吞嚥困難、頭暈、呼吸急促、嚴重疲勞和胸痛。因此,仍需要提供照護者具有各種已知的化學療劑之化學治療潛力的優點、但沒有限制順從性(compliance)和功效的非所欲副作用之治療方案。For example, it is well known that the administration of many established chemotherapeutic agents causes undesirable side effects, including nausea and vomiting, loss of appetite, changes in taste, sparse or brittle hair, joint pain, nail deformity, and tingling of hands or toes. More serious side effects may also occur, such as difficulty in bowel movements, difficulty swallowing, dizziness, shortness of breath, severe fatigue, and chest pain. Therefore, there is still a need to provide caregivers that have the advantages of the chemotherapeutic potential of various known chemotherapeutic agents, but without undesirable side effects that limit compliance and efficacy.

化學療劑(諸如蒽環(anthracycline))被用於治療各種實質固態瘤(solid tumor)及血液惡性疾病(hematological malignancies)。蒽環的作用係藉由嵌入(intercalating)DNA/RNA股的鹼基對之間以抑制DNA和RNA合成,由此阻止快速分裂的癌細胞之複製。蒽環之作用還有藉由抑制拓樸異構酶II酵素(topoisomerase II enzyme),由此阻止超旋扭DNA(supercoiled DNA)放鬆(relaxing),因此阻斷DNA轉錄和複製。蒽環為其中最常使用的化學療劑。Chemotherapeutic agents such as anthracycline are used to treat various solid tumors and hematological malignancies. The role of anthracene is by intercalating between the base pairs of DNA / RNA strands to inhibit DNA and RNA synthesis, thereby preventing the replication of rapidly dividing cancer cells. The role of anthracycline is also by inhibiting topoisomerase II enzyme (topoisomerase II enzyme), thereby preventing the relaxation of supercoiled DNA (supercoiled DNA), thus blocking DNA transcription and replication. Anthracycline is the most commonly used chemotherapeutic agent.

蒽環治療癌症的效果可歸因於彼等的細胞抑制(cytostatic)及細胞毒性(cytotoxic)作用,諸如自由基形成(free radical formation)、脂質過氧化(lipid peroxidation)及直接膜(direct membrane)效應。最好的特徵化機制為與DNA拓樸異構酶II或DNA本身藉由嵌入或共價結合形成而交互作用以及鹼基修飾,彼等負責擾亂DNA複製及轉錄,最終造成引發凋亡細胞死亡。The effect of anthracycline in the treatment of cancer can be attributed to their cytostatic and cytotoxic effects, such as free radical formation, lipid peroxidation and direct membrane effect. The best characterization mechanism is the interaction and base modification with DNA topoisomerase II or DNA itself by intercalation or covalent bonding. They are responsible for disrupting DNA replication and transcription, which ultimately leads to apoptosis. .

蒽環係用於治療癌症,包括白血病、淋巴瘤、乳癌、胃癌、子宮癌、卵巢癌、膀胱癌及肺癌。Anthracycline is used to treat cancer, including leukemia, lymphoma, breast cancer, gastric cancer, uterine cancer, ovarian cancer, bladder cancer, and lung cancer.

代表的蒽環包括道諾黴素(daunorubicin)、多柔比星(doxorubicin)、泛艾黴素(epirubicin)、艾達黴素(idarubicin)和戊柔比星(valrubicin)。道諾黴素(Daunomycin)(道諾黴素(daunorubicin))為第一種在結構上及立體化學上特徵化的蒽環化合物。道諾黴素係用於治療急性淋巴胚細胞(lymphoblastic)及骨髓胚細胞(myeloblastic)白血病。阿德力黴素(Adriamycin)(通用名稱多柔比星)為道諾黴素之羥基衍生物。多柔比星為最廣泛使用的化學療劑之一且通常與其他藥物組合開藥。多柔比星具有廣泛的活性範圍。其為用於實質固態瘤治療之最有效的藥物之一,例如乳癌、小細胞肺癌和卵巢癌治療。其具有對抗膀胱、胃、肝和甲狀腺腫瘤、尤文氏(Ewing’s)和骨原性骨腫瘤、軟組織肉瘤、神經胚細胞瘤及威爾姆氏(腫瘤(Wilms tumor)的顯著活性。其亦具有對抗多發性骨髓瘤、許多類型的白血病及皮膚T細胞淋巴瘤的活性。其亦在霍奇金氏病(Hodgkin’s disease)和非霍奇金氏淋巴瘤(non-Hodgkin’s lymphoma)的治療中扮演重要的角色。泛艾黴素為多柔比星之差向異構物(epimer),差異僅在於糖上的C-4羥基的位向。因為此結構上的些微變化,使泛艾黴素具有比多柔比星低的心臟毒性。泛艾黴素係用於治療胃癌和乳癌且亦用於治療類癌(carcinoid)、子宮內膜癌、肺癌、卵巢癌、食道癌和前列腺癌以及軟組織肉瘤。艾達黴素為道諾黴素的類似物。其缺少C-4甲氧基,這使其親脂性增加。艾達黴素具有作為急性骨髓性白血病之誘導療法(induction therapy)的改進活性。戊柔比星為多柔比星之N-三氟乙醯基1-4-戊酸酯衍生物(N-trifluoroacetyl, 1-4-valerate derivative)。戊柔比星比多柔比星更快速進入細胞。其特別用於治療早期膀胱癌。Representative anthracyclines include daunorubicin, doxorubicin, epirubicin, idarubicin, and valrubicin. Daunomycin (daunorubicin) is the first anthracycline compound characterized structurally and stereochemically. Daunomycin is used to treat acute lymphoblastic and myeloblastic leukemia. Adriamycin (common name doxorubicin) is a hydroxyl derivative of daunorubicin. Doxorubicin is one of the most widely used chemotherapeutic agents and is usually prescribed in combination with other drugs. Doxorubicin has a wide range of activities. It is one of the most effective drugs for the treatment of solid tumors, such as breast cancer, small cell lung cancer and ovarian cancer. It has significant activity against bladder, stomach, liver, and thyroid tumors, Ewing's and osteogenic bone tumors, soft tissue sarcoma, neuroblastoma, and Wilms tumor. It also has resistance The activity of multiple myeloma, many types of leukemia and cutaneous T-cell lymphoma. It also plays an important role in the treatment of Hodgkin's disease and non-Hodgkin's lymphoma The role of panamycin is the epimer of doxorubicin (epimer), the difference is only in the orientation of the C-4 hydroxyl group on the sugar. Because of this slight change in structure, the panamycin has more than The cardiotoxicity of rubicin is low. Panthencin is used to treat gastric and breast cancer and is also used to treat carcinoid, endometrial cancer, lung cancer, ovarian cancer, esophageal cancer and prostate cancer, and soft tissue sarcoma. Damycin is an analogue of daunorubicin. It lacks C-4 methoxy, which increases its lipophilicity. Idamycin has improved activity as an induction therapy for acute myeloid leukemia. E Doxorubicin N-trifluoroacetyl 1-4-valerate derivative (N-trifluoroacetyl, 1-4-valerate derivative). Pentarubicin enters cells more quickly than doxorubicin. It is especially used for early treatment Bladder Cancer.

蒽環的主要副作用之一為心臟毒性(cardiotoxicity),其時常以ECG變化及心律不整、或以心肌病變呈現,導致心臟衰竭。其與患者的累積終身劑量(cumulative lifetime dose)有關,因此經常在達到該特定蒽環的最大累積劑量時停止治療。心臟毒性係藉由使用右雷佐生(Dexrazoxane)(心臟保護劑)或藉由使用道諾黴素及多柔比星之脂質體調配物或藉由使用較長的灌注速率而進一步克服。One of the main side effects of anthracycline is cardiotoxicity, which is often manifested by ECG changes and arrhythmia, or by myocardial lesions, leading to heart failure. It is related to the patient's cumulative lifetime dose, so treatment is often stopped when the maximum cumulative dose of that particular anthracycline is reached. Cardiotoxicity is further overcome by using Dexrazoxane (cardioprotectant) or by using liposomal formulations of daunorubicin and doxorubicin or by using a longer perfusion rate.

再者,雖然蒽環療法延長平均餘命,但並非沒有非所欲之藥物副作用效應。因此,仍需要提供包括投予具有不同的作用機制之新類別藥物且其可獲致更完全的緩解態勢(remission profile)而沒有非所欲副作用的治療。Furthermore, although anthracycline therapy prolongs the average life expectancy, it is not without undesirable side effects of drugs. Therefore, there is still a need to provide treatments that include the administration of new classes of drugs with different mechanisms of action that can achieve a more complete remission profile without undesirable side effects.

本發明者現已確認投予蒽環之新穎方法,其之投予與MADD剪接變異體的調降(down-regulation)組合時,獲致顯著的協同效應(synergistic effect),包括增加的功效以及降低的副作用。The inventors have now confirmed a novel method of administering anthracycline, which, when combined with the down-regulation of MADD splice variants, results in significant synergistic effects, including increased efficacy and reduced Side effects.

本發明者最先想到且證實一或多種能夠調降IG20基因之至少一種剪接變異體的表現之核酸分子(其中並非IG20基因之所有的剪接變異體皆調降)與慣用化學療劑(諸如蒽環)之臨床組合為治療各種形式的癌症之出乎意料的高價值性藥物治療方法。當組合投予患有癌症的個體(諸如那些患有卵巢癌、乳癌、肺癌、胰臟癌、膀胱癌、子宮頸癌、前列腺癌、黑色素瘤、食道癌及其他的實質固態瘤(包括卡波西氏肉瘤(Kaposi’s sarcoma))者)時,本發明者證實siRNA、shRNA及反義寡核苷酸(其中,siRNA、shRNA及反義寡核苷酸包含與MADD剪接變異體的外顯子13L之核酸序列或與MADD剪接變異體的外顯子13L之mRNA轉錄本(mRNA transcript)互補的核酸序列)與化學療劑(諸如蒽環)的效應具有出乎意料的效益,且至少逾一段時間得到出乎意料的優加性(superadditive)症狀減輕,以顯著降低或者沒有症狀、腫瘤生長及腫瘤生存得到證實,且以此方式特別有益於治療多種癌症。再者,首次組合siRNA、shRNA及反義寡核苷酸(其中,siRNA、shRNA及反義寡核苷酸包含與MADD剪接變異體的外顯子13L之核酸序列或與MADD剪接變異體的外顯子13L之mRNA轉錄本互補的核酸序列)之至少一者與化學療劑(諸如蒽環),顯示提供多種癌症之完全緩解以及提高的安全性及耐受性限度之可能性。本發明之目的 The inventors first thought and confirmed that one or more nucleic acid molecules capable of down-regulating the performance of at least one splice variant of the IG20 gene (where not all splice variants of the IG20 gene are down-regulated) and conventional chemotherapeutic agents (such as anthracene The clinical combination of "Huan" is an unexpectedly high-value drug treatment method for treating various forms of cancer. When administered in combination to individuals with cancer (such as those with ovarian cancer, breast cancer, lung cancer, pancreatic cancer, bladder cancer, cervical cancer, prostate cancer, melanoma, esophageal cancer, and other solid solid tumors (including Kappa Kaposi's sarcoma)), the inventors confirmed that siRNA, shRNA and antisense oligonucleotides (wherein, siRNA, shRNA and antisense oligonucleotides contain exon 13L with MADD splice variant Nucleic acid sequence or a nucleic acid sequence complementary to the mRNA transcript (mRNA transcript) of exon 13L of the MADD splice variant) and the effect of chemotherapeutic agents (such as anthracyclines) have unexpected benefits, and at least over a period of time Unexpected reductions in superadditive symptoms are obtained, with significantly reduced or no symptoms, tumor growth and tumor survival are proven, and in this way are particularly beneficial for the treatment of multiple cancers. Furthermore, siRNA, shRNA and antisense oligonucleotides are combined for the first time (wherein the siRNA, shRNA and antisense oligonucleotides comprise the nucleic acid sequence of exon 13L of the MADD splice variant or the exon of the MADD splice variant At least one of the nucleic acid sequences complementary to the mRNA transcript of exon 13L and a chemotherapeutic agent (such as anthracycline) has been shown to provide the possibility of complete remission of various cancers and increased safety and tolerance limits. Object of the invention

本發明之目的係提供新穎組合的抗腫瘤治療,其包含投予代表性化學療劑與能夠調降MADD剪接變異體的表現之核酸分子的組合,該組合的抗腫瘤能治療有效治療各種癌症;以及提供包含此等組合的抗腫瘤劑之醫藥組成物。本發明的另一目的係提供治療各種癌症之新穎方法,其包括投予包含能夠調降MADD剪接變異體的表現之核酸分子與化學療劑(諸如蒽環)之組合的抗腫瘤治療。The object of the present invention is to provide a novel combination of anti-tumor therapy, which comprises the administration of a representative chemotherapeutic agent in combination with a nucleic acid molecule capable of down-regulating the performance of MADD splice variants, the combined anti-tumor therapy can effectively treat various cancers; And to provide pharmaceutical compositions containing antitumor agents of these combinations. Another object of the present invention is to provide a novel method for treating various cancers, which includes administration of an anti-tumor therapy comprising a nucleic acid molecule capable of down-regulating the performance of MADD splice variants and a chemotherapeutic agent such as anthracycline.

本發明之又一目的係提供產生用於組合的抗腫瘤治療之靶定型調配物及治療劑遞輸程序之方法。其他目的係於下文變得清楚,且熟習本技術領域者會清楚另外之目的。本發明之內容 A further object of the present invention is to provide a method of producing targeted formulations and therapeutic agent delivery procedures for combined anti-tumor therapy. Other objectives will become clear below, and those skilled in the art will understand the other objectives. Contents of the invention

吾等相信吾等之發明所包含者可特別於下文歸納:We believe that our inventions can be specifically summarized below:

有用於治療癌症的抗腫瘤劑之組合,其包含有效量的一或多種能夠調降IG20 基因之至少一種剪接變異體的表現之核酸分子,其中,並非IG20 基因之所有的剪接變異體皆調降;以及一或多種蒽環化學療劑(anthracycline chemotherapeutic)。There is a combination of anti-tumor agents for the treatment of cancer, which contains an effective amount of one or more nucleic acid molecules capable of down- regulating the performance of at least one splice variant of the IG20 gene, wherein not all splice variants of the IG20 gene are down-regulated ; And one or more anthracycline chemotherapeutics (anthracycline chemotherapeutic).

此組合,其中,IG20 基因之至少一種剪接變異體係選自MADD剪接變異體、SNP、其對偶基因變異(allelic variation)、其多型性(polymorphism)及其基因突變(genetic mutation)。In this combination, at least one splice variant system of the IG20 gene is selected from MADD splice variants, SNPs, its dual variation, its polymorphism, and its genetic mutation.

此組合,其中,IG20 基因之至少一種剪接變異體為展現外顯子(exon)13L之MADD剪接變異體。In this combination, at least one splice variant of the IG20 gene is a MADD splice variant displaying exon 13L.

此組合,其中,一或多種能夠調降IG20 基因之至少一種剪接變異體的表現之核酸分子係選自siRNA、shRNA及反義寡核苷酸(antisense oligonucleotide)。In this combination, one or more nucleic acid molecules capable of down- regulating the performance of at least one splice variant of the IG20 gene are selected from siRNA, shRNA, and antisense oligonucleotides.

此組合,其中,siRNA、shRNA及反義寡核苷酸係包含與MADD剪接變異體、SNP、其對偶基因變異、其多型性及其基因突變的外顯子13L之核酸序列及/或其mRNA轉錄本(mRNA transcript)互補的核酸。In this combination, the siRNA, shRNA and antisense oligonucleotides comprise the nucleic acid sequence of exon 13L with MADD splice variant, SNP, its dual gene variant, its polymorphism and its gene mutation and / or mRNA transcript (mRNA transcript) complementary nucleic acid.

此組合,其中,能夠調降IG20 基因之至少一種剪接變異體的表現之核酸分子係包含在siRNA或shRNA中。In this combination, a nucleic acid molecule capable of down- regulating the expression of at least one splice variant of the IG20 gene is included in siRNA or shRNA.

此組合,其中,siRNA及shRNA係以包括下列結構之核酸分子編碼:   X正義 - 髮夾環圈 - X反義 ,   其中,X包括以下核酸序列或基本上由以下核酸序列所組成:CGGCGAATCTATGACAATC(SEQ ID NO:1)。In this combination, siRNA and shRNA are encoded by a nucleic acid molecule that includes the following structure: X sense -hairpin loop-X antisense , where X includes or consists essentially of the following nucleic acid sequence: CGGCGAATCTATGACAATC (SEQ ID NO: 1).

此組合,其中,siRNA或shRNA包含具有序列CGGCGAAUCUAUGACAAUC(SEQ ID NO:2)之核酸。In this combination, the siRNA or shRNA comprises a nucleic acid having the sequence CGGCGAAUCUAUGACAAUC (SEQ ID NO: 2).

此組合,其中,siRNA或shRNA包含具有序列CGGCGAAUCUAUGACAAUC(SEQ ID NO:2)之核酸,且係與具有序列GAUUGUCAUAGAUUCGCCG(SEQ ID NO: 10)之同源核酸(cognate nucleic acid)呈雙鏈(duplex)形式。In this combination, the siRNA or shRNA contains a nucleic acid having the sequence CGGCGAAUCUAUGACAAUC (SEQ ID NO: 2), and is in a duplex with the cognate nucleic acid having the sequence GAUUGUCAUAGAUUCGCCG (SEQ ID NO: 10) form.

此組合,其中,shRNA及siRNA係由具有序列CGAATCTATGACAATCTTCAAGAGAGATTGTCATAGA TTCGCCG(SEQ ID NO:3)之核酸編碼(encode),其中,髮夾環圈區係自序列的位置20至28。In this combination, the shRNA and siRNA are encoded by a nucleic acid having the sequence CGAATCTATGACAATCTTCAAGAGAGATTGTCATAGA TTCGCCG (SEQ ID NO: 3), wherein the hairpin loop region is from positions 20 to 28 of the sequence.

此組合,其中,包含與IG20 基因之MADD剪接變異體的外顯子13L之核酸序列及/或其mRNA轉錄本互補的核酸之siRNA、shRNA及反義寡核苷酸係包含具有選自GAUUGUCAUAGAUUCGCCGTT(SEQ ID NO:4)及GAUUGUCAUAGAUUCGCCG(SEQ ID NO:10)之序列的核酸。In this combination, the siRNA, shRNA and antisense oligonucleotides comprising nucleic acid sequences complementary to the nucleic acid sequence of exon 13L of the MADD splice variant of the IG20 gene and / or their mRNA transcripts are selected from GAUUGUCAUAGAUUCGCCGTT ( SEQ ID NO: 4) and nucleic acids of the sequence of GAUUGUCAUAGAUUCGCCG (SEQ ID NO: 10).

此組合,其中,一或多種能夠調降IG20 基因之至少一種剪接變異體的表現之核酸分子係包含在藥物遞輸系統(drug delivery system)中。In this combination, one or more nucleic acid molecules capable of down- regulating the performance of at least one splice variant of the IG20 gene are included in a drug delivery system.

此組合,其中,藥物遞輸系統為靶定型脂質體調配物(targeted liposome formulation)或慢病毒載體(lentivirus vector)。In this combination, the drug delivery system is a targeted liposome formulation or a lentivirus vector.

此組合,其中,一或多種蒽環化學療劑係選自道諾黴素(daunorubicin)、多柔比星(doxorubicin)、泛艾黴素(epirubicin)、艾達黴素(idarubicin)和戊柔比星(valrubicin)。In this combination, one or more anthracycline chemotherapeutic agents are selected from daunorubicin, doxorubicin, epirubicin, idarubicin, and valerox Valrubicin.

此組合,其中,一或多種蒽環化學療劑係呈醫藥上可接受之鹽形式。In this combination, one or more anthracycline chemotherapeutic agents are in the form of pharmaceutically acceptable salts.

此組合,其中,癌症係選自白血病、淋巴瘤、乳癌、胃癌、子宮癌、卵巢癌、膀胱癌和肺癌及其他種類的實質固態瘤癌症,以及卡波西氏肉瘤。In this combination, the cancer is selected from leukemia, lymphoma, breast cancer, gastric cancer, uterine cancer, ovarian cancer, bladder cancer and lung cancer and other types of solid solid tumor cancer, and Kaposi's sarcoma.

再者,治療有需要之個體的選自下列之癌症的方法:白血病、淋巴瘤、乳癌、胃癌、胰臟癌、子宮癌、卵巢癌、子宮頸癌、前列腺癌、黑色素瘤、食道癌、膀胱癌、肝癌、甲狀腺瘤和肺癌及其他種類的實質固態瘤癌症,以及卡波西氏肉瘤,該方法包含投予有效量的抗腫瘤劑組合,其包含:有效量的一或多種能夠調降IG20 基因之至少一種剪接變異體的表現之核酸分子(其中,並非IG20 基因之所有的剪接變異體皆調降),以及一或多種蒽環化學療劑。Furthermore, a method for treating cancer selected from the following individuals in need: leukemia, lymphoma, breast cancer, gastric cancer, pancreatic cancer, uterine cancer, ovarian cancer, cervical cancer, prostate cancer, melanoma, esophageal cancer, bladder Cancer, liver cancer, thyroid tumor, lung cancer and other types of solid solid tumor cancer, and Kaposi's sarcoma, the method includes administering an effective amount of an antitumor agent combination, which includes: an effective amount of one or more can reduce IG20 A nucleic acid molecule that exhibits at least one splice variant of a gene (where not all splice variants of the IG20 gene are down-regulated), and one or more anthracycline chemotherapeutic agents.

此方法,其中,癌症係展現IG20 基因之至少一種剪接變異體的表現。In this method, the cancer line exhibits the performance of at least one splice variant of the IG20 gene.

此方法,其中,癌症係展現IG20 基因之MADD剪接變異體、SNP、其對偶基因變異、其多型性和其基因突變的表現。In this method, the cancer line exhibits the MADD splice variant of the IG20 gene, SNP, its dual gene variant, its polymorphism, and its genetic mutation.

此方法,其中,MADD剪接變異體展現IG20 基因的外顯子13L。In this method, the MADD splice variant exhibits exon 13L of the IG20 gene.

此方法,其中,一或多種能夠調降IG20 基因之至少一種剪接變異體的表現之核酸分子係選自siRNA、shRNA及反義寡核苷酸。In this method, one or more nucleic acid molecules capable of down- regulating the performance of at least one splice variant of the IG20 gene are selected from siRNA, shRNA, and antisense oligonucleotides.

此方法,其中,siRNA、shRNA及反義寡核苷酸包含與IG20 基因之MADD剪接變異體、SNP、其對偶基因變異、其多型性和其基因突變的外顯子13L之核酸序列及/或其mRNA轉錄本互補的核酸。In this method, the siRNA, shRNA, and antisense oligonucleotide comprise the nucleic acid sequence of exon 13L of the MADD splice variant of the IG20 gene, SNP, its dual gene variant, its polymorphism, and its gene mutation, and / or Or a nucleic acid complementary to its mRNA transcript.

此方法,其中,能夠調降IG20 基因之至少一種剪接變異體的表現之核酸分子係包含在siRNA或shRNA中。In this method, a nucleic acid molecule capable of reducing the expression of at least one splice variant of the IG20 gene is contained in siRNA or shRNA.

此方法,其中,siRNA及shRNA係由包括下列結構之核酸分子編碼:   X正義 - 髮夾環圈 - X反義 ,   其中,X包括以下核酸序列或基本上由以下核酸序列所組成:CGGCGAATCTATGACAATC(SEQ ID NO:1)。In this method, siRNA and shRNA are encoded by a nucleic acid molecule that includes the following structure: X- sense -hairpin loop-X antisense , where X includes or consists essentially of the following nucleic acid sequence: CGGCGAATCTATGACAATC (SEQ ID NO: 1).

此方法,其中,siRNA及shRNA包含具有序列CGGCGAAUCUAUGACAAUC(SEQ ID NO:2)之核酸。In this method, the siRNA and shRNA comprise a nucleic acid having the sequence CGGCGAAUCUAUGACAAUC (SEQ ID NO: 2).

此方法,其中,siRNA及shRNA包含具有序列CGGCGAAUCUAUGACAAUC(SEQ ID NO:2)之核酸,且係與具有序列GAUUGUCAUAGAUUCGCCG(SEQ ID NO:10)之同源核酸呈雙鏈形式。In this method, the siRNA and shRNA comprise a nucleic acid having the sequence CGGCGAAUCUAUGACAAUC (SEQ ID NO: 2), and are in a double-stranded form with a homologous nucleic acid having the sequence GAUUGUCAUAGAUUCGCCG (SEQ ID NO: 10).

此方法,其中,shRNA係由具有序列 CGAATCTATGACAATCTTCAAGAGAGATTGTCATAGATTCGCCG(SEQ ID NO:3)之核酸編碼,其中,髮夾環圈區係自序列的位置20至28。In this method, the shRNA is encoded by a nucleic acid having the sequence CGAATCTATGACAATCTTCAAGAGAGATTGTCATAGATTCGCCG (SEQ ID NO: 3), wherein the hairpin loop region is from positions 20 to 28 of the sequence.

此方法,其中,包含與IG20 基因之MADD剪接變異體的外顯子13L之核酸序列及/或其mRNA轉錄本互補的核酸之siRNA、shRNA及反義寡核苷酸包含具有選自GAUUGUCAUAGAUUCGCCGTT(SEQ ID NO:4)及 GAUUGUCAUAGAUUCGCCG(SEQ ID NO:10)之序列的核酸。This method, wherein the siRNA, shRNA and antisense oligonucleotides comprising nucleic acid sequences complementary to the nucleic acid sequence of exon 13L of the MADD splice variant of the IG20 gene and / or their mRNA transcripts comprise an antisense oligonucleotide selected from GAUUGUCAUAGAUUCGCCGTT ID NO: 4) and nucleic acids of the sequence of GAUUGUCAUAGAUUCGCCG (SEQ ID NO: 10).

此方法,其中,一或多種siRNA、shRNA及反義寡核苷酸係以脂質體調配物(liposomal formulation)形式或藉由慢病毒轉染(lentivirus transfection)而投予。In this method, one or more siRNAs, shRNAs and antisense oligonucleotides are administered in the form of liposomal formulations or by lentivirus transfection.

此方法,其中,一或多種siRNA、shRNA及反義寡核苷酸係作為佐劑(adjuvant)投予。In this method, one or more siRNA, shRNA and antisense oligonucleotides are administered as an adjuvant.

此方法,其中,一或多種蒽環化學療劑係選自道諾黴素、多柔比星、泛艾黴素、艾達黴素和戊柔比星。In this method, one or more of the anthracycline chemotherapeutic agents are selected from the group consisting of daunorubicin, doxorubicin, panamectin, idamycin and pentorubicin.

此方法,其中,一或多種蒽環化學療劑係以進一步包含一或多種醫藥上可接受之稀釋劑、賦形劑或載劑之醫藥組成物的形式投予。In this method, one or more anthracycline chemotherapeutic agents are administered in the form of a pharmaceutical composition further comprising one or more pharmaceutically acceptable diluents, excipients or carriers.

此方法,其中,一或多種siRNA、shRNA及反義寡核苷酸係在一或多種蒽環化學療劑之前投予,或係與一或多種蒽環化學療劑同時投予。In this method, one or more siRNAs, shRNAs, and antisense oligonucleotides are administered before one or more anthracycline chemotherapeutics, or are administered simultaneously with one or more anthracycline chemotherapeutics.

此方法,其中,一或多種siRNA、shRNA及反義寡核苷酸係以進一步包含一或多種醫藥上可接受之稀釋劑、賦形劑或載劑之醫藥組成物的形式投予。In this method, one or more siRNAs, shRNAs and antisense oligonucleotides are administered in the form of a pharmaceutical composition further comprising one or more pharmaceutically acceptable diluents, excipients or carriers.

此方法,其中,一或多種siRNA、shRNA及反義寡核苷酸以及一或多種蒽環化學療劑係調配在劑量包裝(dosage pack)中且根據所選擇的治療方案(treatment regime)投予。This method, wherein one or more siRNA, shRNA and antisense oligonucleotides and one or more anthracycline chemotherapeutic agents are formulated in a dose pack and administered according to the selected treatment regime .

發明之組合Combination of inventions

如上文明確說明,在一個態樣中,本發明提供有用於治療、預防、遏阻、延遲哺乳動物之選自下列之癌症的至少一種症狀之發作及/或降低該症狀發展的風險或逆轉該症狀之新穎藥物組合:卵巢癌、乳癌、肺癌、胰臟癌、膀胱癌、子宮頸癌、前列腺癌、黑色素瘤、食道癌及其他的實質固態瘤(包括卡波西氏肉瘤),包含:對該哺乳動物投予能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及/或反義寡核苷酸的量(其中,剪接變異體為MADD、SNP、其對偶基因變異、其多型性和其基因突變,且其中,並非IG20 基因之所有的剪接變異體皆調降),以及當組合投予時提供有益效應之治療有效劑量的蒽環。 定義 As clearly stated above, in one aspect, the present invention provides for the treatment, prevention, suppression, delay of the onset of at least one symptom of a cancer selected from the following cancers in mammals and / or reducing the risk of the development of the symptom or reversing the Symptoms of novel drug combinations: ovarian cancer, breast cancer, lung cancer, pancreatic cancer, bladder cancer, cervical cancer, prostate cancer, melanoma, esophageal cancer and other solid solid tumors (including Kaposi's sarcoma), including: The mammal administered the amount of siRNA, shRNA, and / or antisense oligonucleotides that can reduce the performance of the MADD splice variant of the IG20 gene (where the splice variants are MADD, SNP, its dual gene variant, and many others Genotype and its genetic mutations, and not all splicing variants of the IG20 gene are down-regulated), and a therapeutically effective dose of anthracycline that provides beneficial effects when administered in combination. definition

應用於活性成分之術語〝組合〞在本文用於定義包含本發明之兩藥物(亦即一或多種能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸(其中並非IG20 之所有的剪接變異體皆調降),以及一或多種蒽環)的單一醫藥組成物(調配物)或者聯合(conjointly)地或在預治療/治療方案中投予之兩單獨的醫藥組成物(調配物)其各包含本發明之單一藥物(亦即一或多種能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸(其中並非IG20 之所有的剪接變異體皆調降),以及一或多種蒽環)。The term "combination" applied to the active ingredient is used herein to define siRNA, shRNA, and antisense oligonucleotides that include the two drugs of the invention (i.e., one or more MADD splice variants that can downregulate the IG20 gene) Not all splicing variants of IG20 are down-regulated), and one or more anthracycline) single pharmaceutical composition (formulation) or conjointly or two separate administered in the pre-treatment / treatment regimen The pharmaceutical composition (formulation) each contains a single drug of the present invention (that is, one or more siRNA, shRNA, and antisense oligonucleotides that can downregulate the performance of the MADD splice variant of the IG20 gene (not all of which are IG20 Of splice variants are down-regulated), and one or more anthracene rings).

在本發明之意義範圍內,術語〝聯合投予(conjoint administration)〞係用於意指以一組成物同時投予、或以不同的組成物同時投予、或以不同的組成物相繼投予:一或多種能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸(其中並非IG20 基因之所有的剪接變異體皆調降),以及一或多種蒽環。然而,關於被認為〝聯合(conjoint)〞的相繼投予,一或多種能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸(其中並非IG20 基因之所有的剪接變異體皆調降)以及一或多種蒽環的投予必須以時間間隔分開投予,其仍能得到用於治療、預防、遏阻、延遲哺乳動物的癌症發作及/或降低癌症發展的風險之聯合治療的有益效果。例如,一或多種能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸(其中並非IG20 基因之所有的剪接變異體皆調降)以及一或多種蒽環係可相繼投予。例如,可在投予蒽環之前8至72小時(hr)投予siRNA,以便在以化學療劑治療之前具有調降的MADD表現。Within the meaning of the present invention, the term "conjoint administration" is used to mean simultaneous administration of one composition, or simultaneous administration of different compositions, or sequential administration of different compositions : One or more siRNA, shRNA, and antisense oligonucleotides that can downregulate the performance of the MADD splice variant of the IG20 gene (not all splicing variants of the IG20 gene are downregulated ), and one or more anthracene rings. However, with regard to the sequential administration of what is considered to be "conjoint", one or more siRNAs, shRNAs and antisense oligonucleotides (which are not all of the IG20 gene) can downregulate the performance of the MADD splice variant of the IG20 gene Splice variants are down-regulated) and one or more anthracyclines must be administered separately at time intervals, which can still be used to treat, prevent, suppress, delay the onset of cancer in mammals and / or reduce cancer development The beneficial effects of combination therapy of risk. For example, one or more siRNA, shRNA, and antisense oligonucleotides that can downregulate the performance of the MADD splice variant of the IG20 gene (where not all splice variants of the IG20 gene are downregulated ) and one or more anthracene ring systems Can be voted in succession. For example, siRNA can be administered 8 to 72 hours (hr) before anthracycline administration to have a reduced MADD performance before treatment with a chemotherapeutic agent.

根據本發明的又另一實施態樣,一或多種能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸係用作為佐劑。在本說明內文中,〝佐劑(adjuvant)〞係指特定蒽環反應之增強劑。〝使用一或多種能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸〞意指將一或多種能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸包括在化學療劑之前的預治療(pre-treatment)中或者是與化學療劑組合以同時遞輸。佐劑(諸如一或多種能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸)與化學療劑組合能提供協同性細胞死亡(synergistic cell death)。According to yet another embodiment of the present invention, one or more siRNAs, shRNAs and antisense oligonucleotides capable of down- regulating the performance of the MADD splice variant of the IG20 gene are used as adjuvants. In the context of this description, "adjuvant" refers to an enhancer of a specific anthracycline reaction. "Can be cut using one or more siRNA expression of splice variants MADD IG20 gene, shRNA and antisense oligonucleotide" means one or more splice variants can be lowered MADD IG20 gene expression of siRNA, The shRNA and antisense oligonucleotides are included in pre-treatment before chemotherapeutic agents or combined with chemotherapeutic agents for simultaneous delivery. Adjuvants (such as siRNA, shRNA, and antisense oligonucleotides that can downregulate the performance of the MADD splice variant of the IG20 gene) in combination with chemotherapeutic agents can provide synergistic cell death.

因此,在本發明另一實施態樣中,將能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸之一或多者投予展現癌症的哺乳動物(包括人類),啟動癌細胞的死亡。在提高之易有腫瘤發展的情況下(諸如患者於緩解的情況中),一或多種能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸以及一或多種化學療劑,亦可用於支持凋亡途徑。Therefore, in another embodiment of the present invention, one or more of siRNA, shRNA and antisense oligonucleotides capable of down- regulating the performance of the MADD splice variant of the IG20 gene are administered to mammals exhibiting cancer (including Human), initiate the death of cancer cells. In the case of increased susceptibility to tumor development (such as in patients in remission), one or more siRNA, shRNA, and antisense oligonucleotides that can downregulate the performance of the MADD splice variant of the IG20 gene and one or more Chemotherapeutics can also be used to support the apoptosis pathway.

術語〝治療(treat)〞在本文係用於意指減輕或緩和個體的疾病之至少一種症狀。例如,與癌症有關的術語〝治療〞可意指減輕或緩和與癌症相關聯的腫瘤生長或症狀及/或造成腫瘤消退(tumor regression)。在本發明之意義範圍內,術語〝治療〞亦可表示遏阻、延遲發作(亦即在疾病的臨床表現(clinical manifestation)之前的時期)及/或降低疾病發展或惡化的風險。術語〝防護(protect)〞在本文係用於意指預防、延遲或治療(或適當時,以上全部)個體疾病的發展或持續或加重。在本發明之意義範圍內,癌症係與臨床表現相關聯,包括(但不限於)藥物誘導的非所欲副作用。例如,如本文所揭示,一或多種能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸以及蒽環的預防性投予(prophylactic administration)可防護收受個體發展癌症的風險(例如具有升高之CA125水平的個體、展現組織病理學癌症標記的個體;亦參考在用於各種癌症之標準篩選的腫瘤學文獻中所述之基因篩選及臨床分析)。同樣地,根據本發明,一或多種能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸以及蒽環的治療性投予(therapeutic administration)可使得延緩臨床症狀的發展或甚至症狀消退。The term "treat" is used herein to mean reducing or alleviating at least one symptom of an individual's disease. For example, the term "treatment" related to cancer may mean reducing or alleviating tumor growth or symptoms associated with cancer and / or causing tumor regression. Within the meaning of the present invention, the term "treatment" can also mean to suppress, delay the onset (ie, a period before the clinical manifestation of the disease) and / or reduce the risk of the disease developing or worsening. The term "protect" is used herein to mean preventing, delaying or treating (or, where appropriate, all of the above) the development or persistence or aggravation of an individual's disease. Within the meaning of the present invention, cancer is associated with clinical manifestations, including (but not limited to) drug-induced undesirable side effects. For example, as disclosed herein, the prophylactic administration of one or more siRNA, shRNA and antisense oligonucleotides and anthracycline that can downregulate the performance of the MADD splice variant of the IG20 gene can protect against individual development Risk of cancer (eg, individuals with elevated CA125 levels, individuals exhibiting histopathological cancer markers; also refer to the genetic screening and clinical analysis described in the oncology literature for standard screening of various cancers). Similarly, according to the present invention, the therapeutic administration of one or more siRNA, shRNA and antisense oligonucleotides and anthracycline that can downregulate the performance of the MADD splice variant of the IG20 gene can delay clinical symptoms Development or even the symptoms subside.

術語短干擾RNA(short interfering RNA) (siRNA)係指RNA分子其能夠干擾特定基因轉錄,由此靜默(silencing)標靶蛋白質的基因表現。此過程的代表性機制可包含投予包含與MADD剪接變異體mRNA轉錄本的外顯子13L之核酸序列互補的siRNA、dsRNA、短髮夾RNA(hairpin RNA)(shRNA)及/或反義寡核苷酸之核酸分子。dsRNA及短髮夾RNA係由核糖核酸內切酶切丁酶(endo-ribonuclease Dicer)切割,其將dsRNA或shRNA切成siRNA成分。siRNA之作用係透過RNA誘導之靜默複合體(RNA-induced Silencing Complex)或RISC的形成。RISC複合體鬆解(unwind)siRNA以形成單股siRNA。包含單股siRNA之RISC係結合標靶(target)mRNA、切割mRNA、使其無法識別且由此靜默(silencing)所欲蛋白質之產生。The term short interfering RNA (siRNA) refers to RNA molecules that are capable of interfering with the transcription of specific genes, thereby silencing the gene expression of the target protein. Representative mechanisms for this process may include administration of siRNA, dsRNA, hairpin RNA (shRNA) and / or antisense oligos that are complementary to the nucleic acid sequence of exon 13L of the MADD splice variant mRNA transcript Nucleic acid molecule of nucleotide. The dsRNA and short hairpin RNA are cleaved by endo-ribonuclease Dicer, which cuts dsRNA or shRNA into siRNA components. The role of siRNA is through the formation of RNA-induced Silencing Complex or RISC. The RISC complex unwinds the siRNA to form a single strand siRNA. RISC containing a single strand of siRNA binds target mRNA, cleaves the mRNA, making it unrecognizable and thereby silencing the production of the desired protein.

在本發明之意義範圍內,術語〝能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸〞係用於意指靶定信使RNA(messenger RNA)之藥物。本發明之能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸的實施態樣可為siRNA衍生物,諸如經修飾之siRNA、shRNA及/或反義寡核苷酸,包含與MADD剪接變異體mRNA轉錄本的外顯子13L之核酸序列互補的核酸。特別的實施態樣包括那些在美國專利案號7,910,723中所述之物質。Within the meaning of the present invention, the term "siRNA, shRNA, and antisense oligonucleotides that can downregulate the performance of the MADD splice variant of the IG20 gene" is used to mean drugs that target messenger RNA. Embodiments of the siRNA, shRNA and antisense oligonucleotides of the present invention that can downregulate the performance of the MADD splice variant of the IG20 gene can be siRNA derivatives, such as modified siRNA, shRNA and / or antisense oligonucleotides Glycosides include nucleic acids that are complementary to the nucleic acid sequence of exon 13L of the MADD splice variant mRNA transcript. Specific embodiments include those described in US Patent No. 7,910,723.

能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸的設計可透過已確立之技術完成。用於靶定MADD mRNA轉錄本之siRNA、shRNA及反義寡核苷酸係自Dharmacon(Lafayette, Colo.)獲得。最適合的序列係基於少於50%之GC核苷酸含量、朝向3’端的高AU核苷酸含量及在siRNA區域內沒有反轉的重複物(inverted repeat)分出(sorted out)( Reynolds et al.(2004), Nat Biotechnol, 22(3), 326-30)。The design of siRNA, shRNA and antisense oligonucleotides that can downregulate the performance of the MADD splice variant of the IG20 gene can be accomplished through established technologies. SiRNA, shRNA and antisense oligonucleotides used to target MADD mRNA transcripts were obtained from Dharmacon (Lafayette, Colo.). The most suitable sequence is based on less than 50% GC nucleotide content, high AU nucleotide content towards the 3 'end, and sorted out (Inverted repeat) without reversal in the siRNA region (Reynolds et al. (2004), Nat Biotechnol, 22 (3), 326-30).

反義寡核苷酸(antisense oligonucleotide)係指藉助於RNA-RNA或RNA-DNA或RNA-PNA(肽核酸(peptide nucleic acid))交互作用與標靶mRNA結合及改變標靶mRNA的活性之核酸分子。反義分子通常與標靶序列互補(沿反義分子的單一毗連序列(single contiguous sequence))。Antisense oligonucleotide refers to a nucleic acid that binds to and changes the activity of target mRNA by means of RNA-RNA or RNA-DNA or RNA-PNA (peptide nucleic acid) interaction. molecule. Antisense molecules are usually complementary to the target sequence (single contiguous sequence along the antisense molecule).

在另一實施態樣中,反義DNA可藉助於DNA-RNA交互作用而用於靶定RNA,由此活化RNase H,其分解在雙鏈中的標靶RNA。反義寡核苷酸可包含一或多個RNAse H活化區域,其能夠活化標靶RNA之RNAse H切割。反義DNA可以化學合成或經由使用單股DNA表現載體或其同等物而表現。In another embodiment, antisense DNA can be used to target RNA by means of DNA-RNA interaction, thereby activating RNase H, which breaks down the target RNA in the double strand. The antisense oligonucleotide may include one or more RNAse H activation regions, which can activate RNAse H cleavage of the target RNA. Antisense DNA can be chemically synthesized or expressed by using a single-stranded DNA expression vector or its equivalent.

在另一態樣中,與標靶RNA分子交互作用且調降MADD活性之核酸分子或反義分子係自插入DNA或RNA載體之轉錄單元表現。重組載體可為DNA質體或病毒載體。酶促核酸分子(Enzymatic nucleic acid molecule)或反義表現病毒載體可基於腺相關病毒(adeno-associated virus)、反轉錄病毒(retrovirus)、腺病毒(adenovirus)或α 病毒(alphavirus)構築。在一實施態樣中,能夠表現核酸分子的重組載體係如本文所述方式遞輸且持續在標靶細胞中。或者,病毒載體可用於提供shRNA/siRNA/反義核酸分子的暫時表現(transient expression)。此等載體可在必要時重複投予。在表現之後,干擾核酸分子與標靶RNA結合且調降其功能或表現。核酸分子或反義表現載體的遞輸可為全身性,諸如藉由靜脈內或肌肉內投予、藉由投予至由患者或個體移植之標靶細胞後再引入患者或個體中、或藉由能使得引入所欲標靶細胞中的任何其他方式。反義DNA亦可經由使用單股DNA細胞內表現載體來表現。In another aspect, a nucleic acid molecule or antisense molecule that interacts with a target RNA molecule and reduces MADD activity is expressed from a transcription unit inserted into a DNA or RNA vector. The recombinant vector may be a DNA plastid or a viral vector. Enzymatic nucleic acid molecules or antisense expression virus vectors can be constructed based on adeno-associated virus, retrovirus, adenovirus, or alpha virus. In one embodiment, the recombinant vector capable of expressing the nucleic acid molecule is delivered as described herein and persists in the target cell. Alternatively, viral vectors can be used to provide transient expression of shRNA / siRNA / antisense nucleic acid molecules. These carriers can be administered repeatedly if necessary. After performance, the interfering nucleic acid molecule binds to the target RNA and down-regulates its function or performance. Delivery of nucleic acid molecules or antisense expression vectors can be systemic, such as by intravenous or intramuscular administration, by administering to target cells transplanted by a patient or individual before introducing into the patient or individual, or by It can be introduced into the desired target cell by any other means. Antisense DNA can also be expressed by using single stranded DNA intracellular expression vectors.

siRNA及shRNA核酸分子及反義寡核苷酸係基於MADD剪接變異體的外顯子13L之核苷酸序列而據此設計。MADD剪接變異體的外顯子13L展現的核苷酸序列係諸如定義為SEQ ID NO:11之核苷酸2699至2827。siRNA、shRNA及反義寡核苷酸包含具有特異性靶定MADD剪接變異體的外顯子13L之19個鹼基核心核苷酸序列的寡核苷酸。熟習本技術領域者可構築siRNA、shRNA及反義寡核苷酸,其包含少於50%之GC核苷酸含量、朝向3’端的高AU核苷酸含量及沒有反轉的重複物(inverted repeat),該寡核苷酸構成可跨越(span)外顯子13L 核苷酸序列之寡核苷酸陣列。siRNA、shRNA及反義寡核苷酸可進一步包含2或3個核苷酸突出的3’末端(nucleotide overhanding 3’ end)(諸如端TT(terminal TT))以提高標靶mRNA之切割破壞。時常選擇dTdT,因為其可對寡核苷酸的賦予核酸酶抗性(nuclease resistance)。而且,UU突出端或與真實的mRNA(authentic mRNA)標靶互補的突出端可添加至寡核苷酸的19個鹼基核心(19-base core)中。siRNA and shRNA nucleic acid molecules and antisense oligonucleotides are designed based on the nucleotide sequence of exon 13L of the MADD splice variant. The nucleotide sequence exhibited by exon 13L of the MADD splice variant is such as defined as nucleotides 2699 to 2827 of SEQ ID NO: 11. siRNA, shRNA, and antisense oligonucleotides include oligonucleotides with a 19-base core nucleotide sequence that specifically targets exon 13L of the MADD splice variant. Those skilled in the art can construct siRNA, shRNA, and antisense oligonucleotides, which contain less than 50% of GC nucleotide content, high AU nucleotide content toward the 3 'end, and no inverted repeats (inverted repeat), this oligonucleotide constitutes an oligonucleotide array that can span the 13L nucleotide sequence of exon. siRNA, shRNA, and antisense oligonucleotides may further include 2 or 3 nucleotide overhanging 3 'ends (such as terminal TT) to improve cleavage of target mRNA. DTdT is often selected because it can impart nuclease resistance to oligonucleotides. Furthermore, UU overhangs or overhangs complementary to authentic mRNA targets can be added to the 19-base core of the oligonucleotide.

在一實施態樣中,siRNA、shRNA及反義寡核苷酸包含具有序列GAUUGUCAUAGAUUCGCCGTT(SEQ ID NO:4)之核酸。siRNA及shRNA可呈雙鏈形式。In one embodiment, the siRNA, shRNA and antisense oligonucleotides comprise nucleic acids having the sequence GAUUGUCAUAGAUUCGCCGTT (SEQ ID NO: 4). siRNA and shRNA can be in double-stranded form.

在一實施態樣中,能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸(其中,並非IG20基因之所有的剪接變異體皆調降)包含具有序列GAUUGUCAUAGAUUCGCCG(SEQ ID NO:10)之核酸。siRNA或shRNA可呈雙鏈形式。In one embodiment, siRNA, shRNA, and antisense oligonucleotides that can downregulate the performance of the MADD splice variant of the IG20 gene (where not all splice variants of the IG20 gene are downregulated) include the sequence GAUUGUCAUAGAUUCGCCG (SEQ ID NO: 10) nucleic acid. The siRNA or shRNA can be in double-stranded form.

在一實施態樣中,能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸(其中,並非IG20基因之所有的剪接變異體皆調降)基本上由具有序列GAUUGUCAUAGAUUCGCCG(SEQ ID NO:10)之核酸所組成。siRNA或shRNA可呈雙鏈形式。In one embodiment, siRNA, shRNA, and antisense oligonucleotides that can down- regulate the performance of the MADD splice variant of the IG20 gene (where not all splice variants of the IG20 gene are down-regulated) basically consist of The sequence GAUUGUCAUAGAUUCGCCG (SEQ ID NO: 10) consists of nucleic acids. The siRNA or shRNA can be in double-stranded form.

能夠調降IG20 基因之至少一種剪接變異體的表現之反義寡核苷酸(其中,並非所有的剪接變異體皆調降)可為單股核酸分子,其展現與MADD剪接變異體的外顯子13L之核酸序列或其部分及/或其mRNA轉錄本(mRNA transcript)互補的核酸序列。單股核酸分子可呈RNA或DNA形式。在一實施態樣中,反義寡核苷酸包含序列GAUUGUCAUAGAUUCGCCG(SEQ ID NO:10)。Antisense oligonucleotides capable of down- regulating the performance of at least one splice variant of the IG20 gene (where not all splice variants are down-regulated) can be single-stranded nucleic acid molecules that exhibit an appearance that is different from MADD splice variants The nucleic acid sequence of the sub 13L nucleic acid sequence or a part thereof and / or its mRNA transcript (mRNA transcript) is complementary. The single-stranded nucleic acid molecule may be in the form of RNA or DNA. In one embodiment, the antisense oligonucleotide comprises the sequence GAUUGUCAUAGAUUCGCCG (SEQ ID NO: 10).

在本文所使用的術語蒽環(anthracycline)係指用於治療各種實質固態瘤及血液惡性疾病且展現抗癌化學治療效果之藥物。蒽環之作用係藉由嵌入(intercalating)DNA/RNA股的鹼基對之間以抑制DNA和RNA合成,由此阻止快速分裂的癌細胞之複製。蒽環之作用還有藉由抑制拓樸異構酶II酵素(topoisomerase II enzyme)、由此阻止超旋扭DNA放鬆(relaxing),因此阻斷DNA轉錄和複製。蒽環為其中最常使用的化學療劑。蒽環治療癌症的效果可歸因於彼等的細胞抑制(cytostatic)及細胞毒性(cytotoxic)作用,諸如自由基形成、脂質過氧化及直接膜(direct membrane)效應。最好的特徵化機制為與DNA拓樸異構酶II或DNA本身藉由嵌入或共價結合形成而交互作用以及鹼基修飾,彼等負責擾亂DNA複製及轉錄,最終造成引發凋亡細胞死亡(apoptotic cell death)。該術語含括道諾黴素、多柔比星、泛艾黴素、艾達黴素和戊柔比星,以及本領域已知的其他修飾物及相關衍生物。The term anthracycline as used herein refers to a drug used to treat various solid solid tumors and hematological malignancies and exhibit anti-cancer chemotherapeutic effects. The role of anthracycline is to inhibit DNA and RNA synthesis by intercalating between base pairs of DNA / RNA strands, thereby preventing the replication of rapidly dividing cancer cells. The role of anthracycline is also by inhibiting topoisomerase II enzyme (topoisomerase II enzyme), thereby preventing the relaxation of supertwisted DNA (relaxing), thus blocking DNA transcription and replication. Anthracycline is the most commonly used chemotherapeutic agent. The effectiveness of anthracycline in treating cancer can be attributed to their cytostatic and cytotoxic effects, such as free radical formation, lipid peroxidation, and direct membrane effects. The best characterization mechanism is the interaction and base modification with DNA topoisomerase II or DNA itself by intercalation or covalent bonding. They are responsible for disrupting DNA replication and transcription, which ultimately leads to apoptosis. (apoptotic cell death). The term encompasses daunorubicin, doxorubicin, pangamycin, idamycin and pentorubicin, as well as other modifications and related derivatives known in the art.

在本文以慣用醫藥意義使用的術語〝類似物〞或〝衍生物〞所指之分子係在結構上相似於參考分子(諸如蒽環),但是已以靶定及控制方式予以修飾以用替代的取代基置換參考分子的一或多個特定的取代基,由此產生在結構上類似於參考分子之分子。用於鑑定可能具有改進或偏倚特性(諸如於特定靶定之受體種類的較高的效力及/或選擇性、更大的穿透哺乳動物血腦障壁能力、較少的副作用等)的已知化合物之輕度修飾型式的類似物之合成及篩選(例如使用結構及/或生物化學分析)為醫藥化學中熟知的藥物設計方法。The term "analog" or "derivative" used in the conventional medical sense herein refers to a molecule that is structurally similar to a reference molecule (such as an anthracycline), but has been modified in a targeted and controlled manner to use an alternative The substituents replace one or more specific substituents of the reference molecule, thereby producing molecules similar in structure to the reference molecule. Known for identifying potentially improved or biased properties (such as higher potency and / or selectivity for specific target receptor types, greater ability to penetrate mammalian blood-brain barriers, fewer side effects, etc.) The synthesis and screening of lightly modified versions of analogs of compounds (eg, using structural and / or biochemical analysis) are well-known methods of drug design in medicinal chemistry.

可使用本文所列示之藥物的各種鹽類及異構物(包括立體異構物及鏡像異構物)。術語〝鹽類〞可包括醫藥上可接受之自由酸(free acid)或自由鹼(free base)之加成鹽類。可用於形成醫藥上可接受之酸加成鹽類的酸類之實例包括無機酸諸如鹽酸、硫酸或磷酸,及有機酸諸如乙酸、順丁烯二酸、琥珀酸或檸檬酸等。所有的該等鹽類(或其他類似的鹽類)可以慣用的方式製備。鹽或異構物的本質並不重要,其先決條件是其為無毒性且不顯著地干擾所欲藥理活性。Various salts and isomers (including stereoisomers and mirror isomers) of the drugs listed herein can be used. The term "salts" may include pharmaceutically acceptable addition salts of free acids or free bases. Examples of acids that can be used to form pharmaceutically acceptable acid addition salts include inorganic acids such as hydrochloric acid, sulfuric acid, or phosphoric acid, and organic acids such as acetic acid, maleic acid, succinic acid, or citric acid, and the like. All such salts (or other similar salts) can be prepared in a conventional manner. The nature of the salt or isomer is not important, its prerequisite is that it is non-toxic and does not significantly interfere with the desired pharmacological activity.

應用於劑量或量之術語〝治療有效的〞係指投予有需要的哺乳動物時足以得到所欲活性之化合物或醫藥組成物的量。如本文關於包含能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸以及蒽環之醫藥組成物,所使用之術語〝治療有效量/劑量〞係與術語〝化學治療有效量/劑量〞可交換使用且係指投予哺乳動物時足以產生有效的化學治療反應之化合物或醫藥組成物的量/劑量。應注意當投予活性成分的組合時,則組合的有效量可能包括或可能不包括個別治療有效的各成分之量。The term "therapeutically effective" as applied to a dose or amount refers to an amount sufficient to obtain the desired active compound or pharmaceutical composition when administered to a mammal in need. As used herein for the pharmaceutical composition containing siRNA, shRNA, antisense oligonucleotides and anthracycline that can reduce the performance of the MADD splice variant of the IG20 gene, the term "therapeutically effective amount / dose" is used in conjunction "Chemotherapy effective amount / dose" is used interchangeably and refers to an amount / dose of a compound or pharmaceutical composition sufficient to produce an effective chemotherapeutic response when administered to a mammal. It should be noted that when a combination of active ingredients is administered, then the effective amount of the combination may or may not include the amount of each therapeutically effective ingredient.

述及活性成分量的術語〝次閾值(subthreshold)〞意指不足以產生反應的量,亦即低於最小有效量的量。在相同文中,術語〝次最優(suboptimal)〞意指所產生反應還不及其最大程度的活性成分量(該最大程度要以較高的量達成)。此法在其中所述之組合療法提供投予例如蒽環的〝次閾值〞量的本發明文中特別令人關注,其中在其他的情況下以〝次閾值〞投予,但是透過與能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸的組合能提供完全有效的治療且減輕與蒽環相關聯的不想要之副作用。The term "subthreshold" referring to the amount of active ingredient means an amount that is insufficient to produce a reaction, that is, an amount that is below the minimum effective amount. In the same article, the term "suboptimal" means that the resulting reaction is not yet at its maximum level of active ingredient (this maximum level is to be achieved in higher amounts). This method is of particular interest in the context of the present invention in which the combination therapy described therein provides a "sub-threshold" amount for administration of, for example, anthracycline, where in other cases it is administered at a "sub-threshold", but it can be reduced by The combination of siRNA, shRNA, and antisense oligonucleotides that exhibit the MADD splice variant of the IG20 gene can provide a completely effective treatment and reduce the undesirable side effects associated with anthracycline.

當與本發明之組合療法一起使用時,詞語〝協同效果(synergistic effect)〞、〝協同性(synergistic)〞、〝協同性(synergy)〞、〝協同作用(synergism)〞係指二或更多刺激物其於組合時的合作行為產生比各單獨的刺激物貢獻之效果的總和還更大的效果,亦即超過相加效果(additive effect)。刺激物例如可為調降MADD的表現之劑及至少一治療劑。When used with the combination therapy of the present invention, the words "synergistic effect", "synergistic", "synergy", and "synergism" refer to two or more The cooperative behavior of the stimuli when they are combined produces a greater effect than the sum of the effects contributed by the individual stimuli, that is, exceeds the additive effect. The stimulant may be, for example, an agent that reduces the performance of MADD and at least one therapeutic agent.

當與本發明之組合物一起使用時,詞語〝醫藥上可接受〞係指當投予哺乳動物(例如人類)時身體可耐受且通常不產生不利的反應之分子實體及此等組成物的其他成分。在一實施態樣中,如本文所使用的術語〝醫藥上可接受〞意指經聯邦或州政府管理局核准或在美國藥典或其他公認的藥典中所列示供哺乳動物及更特別是供人類使用。When used with the composition of the present invention, the term "pharmaceutically acceptable" refers to molecular entities and such compositions that can be tolerated by the body and generally do not produce adverse reactions when administered to a mammal (such as a human) Other ingredients. In one embodiment, the term "pharmaceutically acceptable" as used herein means approved by the Federal or State Government Administration or listed in the United States Pharmacopeia or other recognized pharmacopoeia for mammals and more particularly for Human use.

應用於本發明之醫藥組成物的術語〝載劑〞係指與活性化合物(例如能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸以及蒽環)投予的稀釋劑、賦形劑或媒劑。此等醫藥載劑可為無菌液體諸如水、食鹽水溶液、葡萄糖水溶液、水性甘油溶液,及油包括石油、動物、植物或合成來源的那些油諸如花生油、大豆油、礦物油、芝麻油及類似者。此外,適合的載劑可包含脂質體調配物。適合的醫藥載劑亦可於"Remington’s Pharmaceutical Sciences" by E.W. Martin, 18th Edition中說明。The term "carrier" applied to the pharmaceutical composition of the present invention refers to administration with an active compound (for example, siRNA, shRNA, antisense oligonucleotide, and anthracycline that can downregulate the performance of the MADD splice variant of the IG20 gene) Diluent, excipient or vehicle. Such pharmaceutical carriers may be sterile liquids such as water, saline solution, dextrose solution, aqueous glycerin solution, and oils including those of petroleum, animal, plant, or synthetic origin such as peanut oil, soybean oil, mineral oil, sesame oil, and the like. In addition, suitable carriers can include liposome formulations. Suitable pharmaceutical carriers also in "Remington's Pharmaceutical Sciences" by EW Martin, 18 th Edition described.

如本文所使用的術語〝個體〞係指哺乳動物(例如囓齒類,諸如小鼠或大鼠)。該術語特別係指人類。The term "individual" as used herein refers to mammals (eg, rodents, such as mice or rats). The term specifically refers to humans.

術語〝約〞或〝大約〞通常意指在給定值或範圍的20%之內、10%之內、及隨意地5%之內。或者,尤其在生物系統,術語〝約〞意指在約一對數(log)(亦即數量級)之內,隨意地(optionally)在給定值的兩倍之內。The term "about" or "approximately" generally means within 20%, within 10%, and optionally within 5% of a given value or range. Or, especially in biological systems, the term "about" means within about a log (ie, an order of magnitude), optionally within twice the given value.

術語〝由…所組成〞係排除未在申請專利範圍內明確說明之任何要素、步驟或成分。相關Gray, 53 F.2d 520, 11 USPQ 255(CCPA 1931)。術語〝基本上由…所組成〞限制申請專利範圍於明確說明之材料或步驟且該等不實質地影響所請發明的基本及新穎特徵。相關Herz, 537 F.2d 549, 551-52, 190 USPQ 461, 463(CCPA 1976))(於原著中強調)。 醫藥組成物 The term "consisting of" excludes any elements, steps or ingredients that are not explicitly stated in the scope of the patent application. Related Gray, 53 F.2d 520, 11 USPQ 255 (CCPA 1931). The term "consisting essentially of" limits the scope of the patent application to clearly stated materials or steps and these do not materially affect the basic and novel features of the claimed invention. Related Herz, 537 F. 2d 549, 551-52, 190 USPQ 461, 463 (CCPA 1976)) (emphasized in the original work). Pharmaceutical composition

與本發明之方法一起,亦提供醫藥組成物,其包含治療有效量的能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸及/或治療有效量的蒽環以及隨意地(optionally)另外的載劑或賦形劑(全為醫藥上可接受)。能夠調降IG20 基因之MADD剪接變異體的表現之該等siRNA、shRNA及反義寡核苷酸以及蒽環係可調配成單一組成物或可調配成可聯合投予之兩單獨組成物。在一實施態樣中,彼等係調配成單一組成物或隨意地相繼或同時投予之兩單獨組成物。組成物可調配以用於一天投予一次或一天投予兩次,以及在各別療法中典型的劑量方案。Along with the method of the present invention, there is also provided a pharmaceutical composition comprising a therapeutically effective amount of siRNA, shRNA and antisense oligonucleotides capable of reducing the performance of the MADD splice variant of the IG20 gene and / or a therapeutically effective amount of anthracene Rings and optionally additional carriers or excipients (all pharmaceutically acceptable). The siRNA, shRNA, antisense oligonucleotides and anthracene ring system that can downregulate the performance of the MADD splice variant of the IG20 gene can be formulated into a single composition or into two separate compositions that can be co-administered. In one embodiment, they are formulated into a single composition or two separate compositions administered randomly or sequentially or simultaneously. The composition can be formulated for administration once a day or twice a day, as well as typical dosage regimens in individual therapies.

在進一步的實施態樣中,本組合之調配可使得彼等可以調定方案(titration regimen)投予以使患者可適應於蒽環的效果及/或臨床醫師可上調(titrate up)能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸,使得蒽環可下調至顯著較低的劑量,以使蒽環的毒性副作用減至最低及/或調和與蒽環相關聯的給藥難度。In a further embodiment, the formulation of this combination may allow them to be administered in a titration regimen so that the patient can adapt to the effect of anthracycline and / or the clinician can titrate up to reduce IG20 The siRNA, shRNA and antisense oligonucleotides of the MADD splice variant of the gene allow the anthracycline to be down-regulated to a significantly lower dose to minimize the toxicity and / or harmonization of the anthracycline Difficulty of drug delivery.

在所揭示之組成物中,能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸以及蒽環二者係隨意地以治療有效量存在。最優的治療有效量應考慮實際的投予模式、投予之藥物形式、投予針對的適應症、所涉及的個體(例如體重、健康、年齡、性別等)及負責的醫師或獸醫師的偏好和經驗而憑實驗決定。如本文所揭示,用於人類投予,能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸以及蒽環二者,係以適合的形式以本領域理解的那些劑量範圍投予。在一實施態樣中,能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸係以治療劑量投予;蒽環係以次最優(suboptimal)或降低的劑量投予。在某些例子中,亦可能希望以次最優或次閾值(subthreshold)量投予活性成分之一者或另一者,且此等投予亦落在本發明之範圍內。In the disclosed composition, siRNA, shRNA, antisense oligonucleotides, and anthracycline capable of down- regulating the performance of the MADD splice variant of the IG20 gene are optionally present in therapeutically effective amounts. The optimal therapeutically effective amount should consider the actual mode of administration, the form of medication administered, the indications targeted for administration, the individual involved (e.g. body weight, health, age, gender, etc.) and the responsible physician or veterinarian. Preferences and experience are determined by experiment. As disclosed herein, for human administration, both siRNA, shRNA, antisense oligonucleotides, and anthracycline that can reduce the performance of the MADD splice variant of the IG20 gene are understood in the art in a suitable form Those dose ranges are administered. In one embodiment, siRNA, shRNA, and antisense oligonucleotides that can reduce the performance of the MADD splice variant of the IG20 gene are administered at a therapeutic dose; the anthracycline system is suboptimal or reduced Dosing. In some examples, it may also be desirable to administer one or the other of the active ingredients in suboptimal or subthreshold amounts, and such administration also falls within the scope of the invention.

本發明亦提供製備醫藥組成物之方法,其包含摻合治療有效量的能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸以及蒽環,以及隨意地(optionally)一或多種生理上可接受的載劑及/或賦形劑及/或輔助物質。 投予 The present invention also provides a method of preparing a pharmaceutical composition, which comprises blending a therapeutically effective amount of siRNA, shRNA, antisense oligonucleotides, and anthracycline capable of down- regulating the performance of the MADD splice variant of the IG20 gene, and optionally ( Optionally) one or more physiologically acceptable carriers and / or excipients and / or auxiliary substances. Give

本發明之活性劑可以含有慣用的無毒性醫藥上可接受之載劑(有或無能選擇性遞輸活性劑至特定細胞種類或組織之靶定分子(targeting molecule))的單位劑量調配物(dosage unit formulation)經皮內、非經腸、鼻內或腫瘤內投予。皮內投予(intradermal administration)可包含使用經皮貼片(transdermal patch)、微研磨劑(microabrasion)或奈米乳液(nanoemulsion)。非經腸投予(parenterally administer)之藥可以注射液、時間控制釋放媒劑(包括擴散控制系統)、滲透裝置、溶解控制基質及可溶蝕/可降解的基質(erodible/degradable matrices)之形式投予。The active agent of the present invention may contain a conventional unit dose formulation of a non-toxic pharmaceutically acceptable carrier (with or without a targeting molecule that can selectively deliver the active agent to a specific cell type or tissue) unit formulation) administered intradermally, parenterally, intranasally, or intratumorally. Intradermal administration may include the use of transdermal patches, microabrasion, or nanoemulsion. Parenterally administered drugs can be administered in the form of injections, time-controlled release vehicles (including diffusion control systems), osmotic devices, dissolution control matrices, and erodible / degradable matrices To.

以錠劑或膠囊形式經口投予,活性藥物組份可與無毒的醫藥上可接受之賦形劑組合,諸如結合劑(例如,預糊化玉米澱粉(pregelatinized maize starch)、聚乙烯基吡咯啶酮或羥丙基甲基纖維素(hydroxypropyl methylcellulose));填充劑(例如乳糖、蔗糖、葡萄糖、甘露醇、山梨醇及其他還原和非還原糖、微晶纖維素、硫酸鈣或磷酸氫鈣);潤滑劑(例如硬脂酸鎂、滑石或矽石、硬脂酸、硬脂基反丁烯二酸鈉(sodium stearyl fumarate)、甘油二十二酸酯(glyceryl behenate)、硬脂酸鈣及類似者);崩解劑(disintegrant)(例如馬鈴薯澱粉或乙醇酸澱粉鈉(sodium starch glycolate));或潤濕劑(例如月桂基硫酸鈉(sodium lauryl sulphate))、著色和調味劑、明膠、甜味劑、天然和合成膠(諸如阿拉伯膠(acacia)、黃蓍膠(tragacanth)或藻酸鹽(alginate))、緩衝鹽、羧甲基纖維素(carboxymethylcellulose)、聚乙二醇、蠟及類似者。以液體形式的經口投予,藥物組份可與無毒的醫藥上可接受之惰性載劑(例如乙醇、甘油、水)、懸浮劑(例如山梨醇糖漿、纖維素衍生物或氫化可食性脂肪(hydrogenated edible fat))、乳化劑(例如卵磷脂或阿拉伯膠)、非水性媒劑(例如杏仁油、含油酯(oily ester)、乙醇或分餾植物油)、保存劑(例如對-羥基苯甲酸甲酯或丙酯或者山梨酸(sorbic acid))及類似者。亦可添加穩定劑以穩定劑型,諸如抗氧化劑(BHA、BHT、五倍子酸丙酯(propyl gallate)、抗壞血酸鈉、檸檬酸)。For oral administration in the form of tablets or capsules, the active pharmaceutical ingredient may be combined with non-toxic pharmaceutically acceptable excipients, such as a binding agent (eg, pregelatinized maize starch, polyvinylpyrrole Pyridone or hydroxypropyl methylcellulose); fillers (such as lactose, sucrose, glucose, mannitol, sorbitol and other reduced and non-reduced sugars, microcrystalline cellulose, calcium sulfate or calcium hydrogen phosphate) ); Lubricants (eg magnesium stearate, talc or silica, stearic acid, sodium stearyl fumarate), glyceryl behenate, calcium stearate And the like); disintegrant (such as potato starch or sodium starch glycolate); or wetting agent (such as sodium lauryl sulphate), coloring and flavoring agents, gelatin , Sweeteners, natural and synthetic gums (such as acacia, tragacanth or alginate), buffer salts, carboxymethylcellulose, polyethylene glycol, wax And the like. For oral administration in liquid form, the pharmaceutical ingredients can be combined with non-toxic pharmaceutically acceptable inert carriers (eg ethanol, glycerol, water), suspending agents (eg sorbitol syrup, cellulose derivatives or hydrogenated edible fats) (hydrogenated edible fat)), emulsifier (e.g. lecithin or gum arabic), non-aqueous vehicle (e.g. almond oil, oily ester, ethanol or fractionated vegetable oil), preservative (e.g. p-hydroxybenzoic acid Ester or propyl ester or sorbic acid) and the like. Stabilizers can also be added to stabilize the dosage form, such as antioxidants (BHA, BHT, propyl gallate, sodium ascorbate, citric acid).

錠劑可以本領域已知的方法包膜(coat)。本發明之組成物亦可引入例如由聚乙醇酸/乳酸(polyglycolic acid/lactic acid)(PGLA)所製造之微球(microsphere)或微膠囊(microcapsule)中(參見例如美國專利案號5,814,344、5,100,669和4,849,222;PCT公開案WO95/11010和WO93/07861)。用於經口投予之液體製劑可呈例如溶液、糖漿、乳液或懸浮液的形式,或彼等可以乾產物呈現(用於在使用前以水或其他適合的媒劑配置(reconstitution))。用於經口投予之製劑可適當地調配以給出經控制或延後釋放之活性化合物。The lozenges can be coated by methods known in the art. The composition of the present invention can also be incorporated into, for example, microspheres or microcapsules made of polyglycolic acid / lactic acid (PGLA) (see, for example, U.S. Patent Nos. 5,814,344, 5,100,669) And 4,849,222; PCT Publications WO95 / 11010 and WO93 / 07861). Liquid preparations for oral administration may be in the form of, for example, solutions, syrups, emulsions or suspensions, or they may be presented as dry products (for reconstitution with water or other suitable vehicles before use). Formulations for oral administration can be suitably formulated to give controlled or delayed release of the active compound.

在本領域中已知的藥物遞輸系統為靶定型遞輸(targeted delivery)及/或控制型釋放(controlled release)治療劑之特殊技術。Drug delivery systems known in the art are specific technologies for targeted delivery and / or controlled release of therapeutic agents.

藥物遞輸系統係通過可控制治療投予之介質而使藥完好地部署至特定靶定之身體部分。此等藥物遞輸系統可包括微技術及奈米技術。The drug delivery system allows the drug to be deployed to a specific target body part by controlling the medium administered by the treatment. Such drug delivery systems may include microtechnology and nanotechnology.

能夠調降IG20 基因之至少一種剪接變異體的表現之選自與IG20 基因mRNA轉錄本之MADD剪接變異體的核苷酸序列互補的siRNA、shRNA及反義寡核苷酸之核酸分子可併入本領域已知且可包括聚合物微球、聚合物微胞及水凝膠型材料的藥物遞送系統,在本領域瞭解該藥物遞輸系統有效提高藥物靶定特異性(drug targeting specificity)、降低全身毒性、改進治療吸收速率及提供藥品免於生化降解的防護。另外,設想了許多其他的藥物遞輸系統,包括生物可降解聚合物、樹狀聚合物(亦稱為星狀聚合物)、電活性聚合物及經修飾之C-60富勒烯(亦稱為〝巴克球(buckyball)〞)。Nucleic acid molecules selected from siRNA, shRNA and antisense oligonucleotides complementary to the nucleotide sequence of the MADD splice variant of the IG20 gene mRNA transcript can down- regulate the performance of at least one splice variant of the IG20 gene Drug delivery systems that are known in the art and can include polymer microspheres, polymer microcells, and hydrogel-type materials. It is understood in the art that the drug delivery system effectively improves drug targeting specificity and reduces drug targeting specificity. Systemic toxicity, improved therapeutic absorption rate, and protection against biochemical degradation of drugs. In addition, many other drug delivery systems are envisioned, including biodegradable polymers, dendrimers (also known as star polymers), electroactive polymers, and modified C-60 fullerenes (also known as It is "buckyball".

而且,藥物遞輸系統可包括編碼能夠調降IG20 基因之至少一種剪接變異體的表現之核酸分子的核酸之慢病毒介導之轉導(lentivirus-mediated transduction),該核酸分子係選自與IG20 基因mRNA轉錄本之MADD剪接變異體的核苷酸序列互補的siRNA、shRNA及反義寡核苷酸。Furthermore, the drug delivery system may include a lentivirus-mediated transduction of a nucleic acid encoding a nucleic acid molecule capable of down- regulating the expression of at least one splice variant of the IG20 gene, the nucleic acid molecule selected from the group consisting of IG20 SiRNA, shRNA and antisense oligonucleotides complementary to the nucleotide sequence of MADD splice variants of gene mRNA transcripts.

活性藥物亦可以脂質體遞輸系統的形式投予,諸如單層小微脂粒、單層大微脂粒及多層微脂粒。脂質體可由各種熟知的磷脂形成,諸如膽固醇、硬脂胺或磷脂醯膽鹼。Active drugs can also be administered in the form of liposome delivery systems, such as single-layer small liposomes, single-layer large liposomes, and multi-layer liposomes. Liposomes can be formed from various well-known phospholipids, such as cholesterol, stearylamine, or phospholipid choline.

能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸可以靶定型脂質體調配物(targeted liposome formulation)的形式結合。代表性組裝可包括囊封在自組裝之工程化蛋白質內,其提供此等寡核苷酸有效的包裝、結合、組裝及遞輸。此等工程化蛋白質之成分可選自透過附著於選定之細胞表面受體而主動靶定腫瘤細胞的肽、促進受體介導之胞飲作用的肽及提供運送之寡核苷酸主動釋放的肽。此等自組裝之蛋白質運送分子(包括本發明之寡核苷酸)可以包含下列兩種組份的奈米粒子(<50奈米)形式組裝:工程化多肽(靶定肽、膜穿透肽、寡核苷酸捕獲肽(oligonucleotide capturing peptide))及寡核苷酸治療酬載(oligonucleotide therapeutic payload)。SiRNA, shRNA and antisense oligonucleotides that can downregulate the performance of the MADD splice variant of the IG20 gene can be combined in the form of targeted liposome formulations. Representative assembly may include encapsulation within self-assembled engineered proteins, which provides efficient packaging, binding, assembly, and delivery of these oligonucleotides. The components of these engineered proteins can be selected from peptides that actively target tumor cells by attaching to selected cell surface receptors, peptides that promote receptor-mediated endocytosis, and active release of oligonucleotides that provide delivery Peptide. These self-assembled protein transport molecules (including the oligonucleotide of the present invention) can be assembled in the form of nanoparticles (<50 nanometers) containing the following two components: engineered polypeptides (targeting peptides, membrane penetrating peptides) , Oligonucleotide capturing peptide (oligonucleotide capturing peptide) and oligonucleotide therapeutic payload (oligonucleotide therapeutic payload).

本發明之藥物亦可藉由使用單株抗體(作為與化合物分子偶合之個別載劑)遞輸。活性藥物亦可與作為可標靶的藥物載劑之可溶性聚合物偶合。此等聚合物可包括聚乙烯基吡咯啶酮、吡喃共聚物、聚羥基-丙基甲基丙醯胺-酚(polyhydroxy-propyl methacrylamide-phenol)、聚羥基-乙基天門冬醯胺-酚(polyhydroxy-ethyl- aspartamide-phenol)或經棕櫚醯基殘基取代之聚環氧乙烷-聚離胺酸(polyethyleneoxide-polylysine)。此外,活性藥物可與有用於達成控制藥物釋放之生物可降解的聚合物類別偶合,例如聚乳酸、聚乙醇酸、聚乳酸與聚乙醇酸之共聚物、聚ε己內酯(polyepsilon caprolactone)、聚羥基丁酸、聚原酸酯(polyorthoester)、聚縮醛、聚氫化吡喃(polyhydropyran)、聚氰基丙烯酸酯及水凝膠之交聯或兩親性嵌段共聚物。The drugs of the present invention can also be delivered by using monoclonal antibodies (as individual carriers coupled to compound molecules). Active drugs can also be coupled with soluble polymers as targetable drug carriers. Such polymers may include polyvinylpyrrolidone, pyran copolymer, polyhydroxy-propyl methacrylamide-phenol, polyhydroxy-ethyl aspartame-phenol (polyhydroxy-ethyl-aspartamide-phenol) or polyethylene oxide-polylysine substituted with palmitic acid residues. In addition, active drugs can be coupled with biodegradable polymers that are used to achieve controlled drug release, such as polylactic acid, polyglycolic acid, copolymers of polylactic acid and polyglycolic acid, polyepsilon caprolactone, Cross-linked or amphiphilic block copolymer of polyhydroxybutyric acid, polyorthoester, polyacetal, polyhydropyran, polycyanoacrylate and hydrogel.

以吸入投予,根據本發明之治療劑,可以來自使用適當的推進劑(例如二氯二氟甲烷、三氯氟甲烷、二氯四氟乙烷、二氧化碳或其他適合的氣體)之加壓包裝或噴霧器的氣霧噴劑呈現的形式方便地遞輸。在加壓氣霧的例子中,單位劑量可藉由提供遞輸經計量之量的閥測定。可調配在吸入器或吹入器中使用的例如明膠之膠囊及藥匣以含有化合物與適合的粉末基底(諸如乳糖或澱粉)之粉末混合物。For administration by inhalation, the therapeutic agent according to the present invention may come from the pressurized packaging using a suitable propellant (such as dichlorodifluoromethane, trichlorofluoromethane, dichlorotetrafluoroethane, carbon dioxide or other suitable gas) Or the aerosol spray of the nebulizer is conveniently delivered. In the case of pressurized aerosols, the unit dose can be determined by providing a valve that delivers a metered amount. Capsules and cartridges such as gelatin used in inhalers or insufflators can be formulated to contain a powder mixture of the compound and a suitable powder base such as lactose or starch.

本發明之調配物可非經腸遞輸,亦即經靜脈內(i.v.)、腦室內(intracerebroventricular)(i.c.v.)、皮下(subcutaneous)(s.c.)、腹膜內(i.p.)、肌肉內(i.m.)、表皮下(subdermal)(s.d.)、腫瘤內(i.t.)或皮內(i.d.)投予,以經由例如快速濃注(bolus injection)或連續輸注(continuous infusion)之直接注射。用於注射之調配物可以具有添加的保存劑之單位劑型呈現,例如在安瓿(ampoules)或多劑量容器(multi-dose container)中。組成物可呈諸如在油性或水性媒劑中的賦形劑、懸浮液、溶液或乳液的此等形式,且可含有調配劑,諸如懸浮劑、穩定劑及/或分散劑。或者,活性成分可呈粉末形式以供在使用前以適合的媒劑(例如無菌的無熱原水(sterile pyrogen-free water))配置。The formulation of the present invention can be delivered parenterally, that is, intravenously (iv), intracerebroventricular (icv), subcutaneous (sc), intraperitoneal (ip), intramuscular (im), Subdermal (sd), intratumoral (it), or intradermal (id) administration for direct injection via, for example, bolus injection or continuous infusion. Formulations for injection can be presented in unit dosage form with added preservatives, for example in ampoules or multi-dose containers. The composition may take such forms as excipients, suspensions, solutions or emulsions in oily or aqueous vehicles, and may contain formulating agents such as suspending agents, stabilizers and / or dispersing agents. Alternatively, the active ingredient may be in powder form for constitution with a suitable vehicle (eg, sterile pyrogen-free water) before use.

亦可調配本發明之組成物用於直腸投予,例如成為栓劑(suppositories)或保留灌腸(retention enemas)(例如含有慣用栓劑基底,諸如可可脂或其他的甘油酯)。The composition of the present invention can also be formulated for rectal administration, for example as suppositories or retention enemas (for example containing conventional suppository bases such as cocoa butter or other glycerides).

如本文所揭示,能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸以及蒽環可與醫藥上可接受及與活性成分可相容之賦形劑摻合。另外,若必要時,製劑亦可包括少量的輔助物質,諸如潤濕劑或乳化劑、pH緩衝劑及/或提高醫藥組成物的有效性之劑。該等輔助分子可作為蛋白質或藉由編碼分子表現之載體表現而全身或局部遞輸。用於遞輸能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸以及蒽環的上述技術亦可用於輔助分子的遞輸。As disclosed herein, siRNA, shRNA and antisense oligonucleotides and anthracyclines that can downregulate the performance of the MADD splice variant of the IG20 gene can be blended with excipients that are pharmaceutically acceptable and compatible with the active ingredient . In addition, if necessary, the preparation may also include a small amount of auxiliary substances, such as wetting or emulsifying agents, pH buffering agents, and / or agents that increase the effectiveness of the pharmaceutical composition. These accessory molecules can be delivered systemically or locally as proteins or expressed by vectors expressing the encoded molecules. The above techniques for delivering siRNA, shRNA, antisense oligonucleotides, and anthracyclines that can down- regulate the performance of the MADD splice variant of the IG20 gene can also be used for delivery of auxiliary molecules.

儘管本發明之活性劑可以分次劑量(divided dose)投予,例如以能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸以及蒽環之各者的單一日劑量每天分二或三次,但是以兩種劑在一個組成物中或在兩單獨組成物中同時投予的單一日劑量為一實施態樣。Although the active agent of the present invention can be administered in divided doses, for example, siRNA, shRNA, antisense oligonucleotides, and anthracycline, which can downregulate the performance of the MADD splice variant of the IG20 gene, are single The daily dose is divided into two or three times a day, but a single daily dose in which two doses are administered in one composition or two separate compositions simultaneously is one embodiment.

本發明亦包含製備醫藥組成物之方法,其包含將能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸以及蒽環與醫藥上可接受之載劑及/或賦形劑組合。The present invention also includes a method of preparing a pharmaceutical composition, which includes siRNA, shRNA and antisense oligonucleotides capable of down- regulating the performance of the MADD splice variant of the IG20 gene, anthracycline and a pharmaceutically acceptable carrier and / or Or a combination of excipients.

可用於本發明之單位劑量之量中的能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸的具體量可易由那些熟習本技術領域者確定。可用於本發明之減少的單位劑量之量中之蒽環的具體量包括例如以建議劑量的3/4、1/2、1/3、1/4、1/5、1/10、1/20使用之蒽環。The specific amount of siRNA, shRNA and antisense oligonucleotides that can be used to reduce the performance of the MADD splice variant of the IG20 gene in the amount of the unit dose of the present invention can be easily determined by those skilled in the art. Specific amounts of anthracycline that can be used in the reduced unit dose amount of the present invention include, for example, 3/4, 1/2, 1/3, 1/4, 1/5, 1/10, 1 / 20 used anthracene ring.

本發明亦提供醫藥包裝或套組,其包含一或多個含有本發明之調配物的一或更多成分的容器。在一相關的實施態樣中,本發明提供用於製備本發明之醫藥組成物的套組,該套組包含在第一容器或多個容器中的一或多種能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸之調配物以及在第二容器或多個容器中的一或多種蒽環,及隨意地用於摻合兩種藥物及/或用於以治療有意義的方案投予藥物的說明書。套組的各容器亦可隨意地包括一或多種身體可接受之載劑及/或賦形劑及/或輔助物質。與此等容器相關的是可為由管理藥品或生物產品之製造、使用或銷售的政府機構規定之形式的公告,該公告反映由機構核准用於人類投藥之製造、使用或銷售。The present invention also provides a pharmaceutical package or kit comprising one or more containers containing one or more ingredients of the formulation of the present invention. In a related embodiment, the present invention provides a kit for preparing the pharmaceutical composition of the present invention, the kit comprising one or more MADD splices capable of down- regulating the IG20 gene in a first container or multiple containers The formulation of the siRNA, shRNA and antisense oligonucleotides of the variants and one or more anthracene rings in the second container or containers, and optionally used for blending two drugs and / or for Instructions for administering the drug in a therapeutically meaningful protocol. Each container of the kit may optionally include one or more body-acceptable carriers and / or excipients and / or auxiliary substances. Related to these containers is an announcement that may be in the form prescribed by a government agency that regulates the manufacture, use, or sale of pharmaceuticals or biological products. The announcement reflects the agency's approval for the manufacture, use, or sale of medicines for human administration.

若有需要,組成物可呈現在可含有一或多種含有活性成分之單位劑型的包裝或分配器裝置中。包裝例如可包含金屬或塑膠箔片,諸如泡殼包裝。包裝或分配器裝置可附有投藥的說明書。在可相容的醫藥載劑中調配的本發明之組成物亦可製備、置於適當的容器中且貼上用於適應症治療之標籤。 有效劑量及安全性評估 If desired, the composition can be presented in a package or dispenser device that can contain one or more unit dosage forms containing the active ingredient. The packaging may contain, for example, metal or plastic foil, such as a blister pack. The pack or dispenser device may be accompanied by instructions for administration. The composition of the present invention formulated in a compatible pharmaceutical carrier can also be prepared, placed in a suitable container, and labeled with a label for indication treatment. Effective dose and safety assessment

根據本發明之方法,本文所述之醫藥組成物係以治療有效劑量投予患者,在一實施態樣中,具有組合之治療目的所需以外的最低毒性之劑量。以〝定義〞為標題的章節提供術語〝化學治療有效劑量〞及〝治療有效劑量〞之定義。在一實施態樣中,能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸以及蒽環各自以在組合時提供提高的效果(例如在各劑單獨投予時未觀察到的效果)之劑量使用。本發明之一實施態樣為能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸以及蒽環二者係以〝次最優〞或〝次閾值〞劑量投予,該等劑量在組合時提供具有意外降低不想要之副作用的優加性效果。According to the method of the present invention, the pharmaceutical composition described herein is administered to a patient in a therapeutically effective dose, and in one embodiment, has the lowest toxic dose other than that required for the combined therapeutic purpose. The section titled "Definitions" provides definitions for the terms "chemotherapy effective dose" and "therapeutically effective dose". In one embodiment, the siRNA, shRNA, antisense oligonucleotides, and anthracycline that can downregulate the performance of the MADD splice variant of the IG20 gene each provide an improved effect when combined (eg, administered separately in each agent) The effect was not observed at the time). One embodiment of the present invention is that siRNA, shRNA, antisense oligonucleotides and anthracycline that can downregulate the performance of the MADD splice variant of the IG20 gene are administered at a "suboptimal" or "subthreshold" dose In addition, these doses, when combined, provide a superior additive effect that unexpectedly reduces unwanted side effects.

本發明能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸的功效可使用試管內(in vitro )藥理試驗測定,諸如使用定量反轉錄酶-聚合酶鏈反應(quantitative Reverse Transcriptase-Polymerase Chain Reaction)(Q-RT-PCR)或RT-PCR等測量mRNA水平。本發明之蒽環的功效可使用那些熟習本技術領域者已知的試管內(in vitro )方法測定,例如細胞毒性檢定法(cell cytotoxicity assay)、MTT檢定法(MTT assay)、細胞凋亡檢定法、細胞移動檢定法(cell migration assay)等。The efficacy of siRNA, shRNA, and antisense oligonucleotides that can reduce the performance of the MADD splice variant of the IG20 gene of the present invention can be measured using in vitro pharmacological tests, such as the use of quantitative reverse transcriptase-polymerase chain reaction (quantitative Reverse Transcriptase-Polymerase Chain Reaction) (Q-RT-PCR) or RT-PCR to measure mRNA levels. The efficacy of the anthracycline of the present invention can be measured using in vitro methods known to those skilled in the art, such as cell cytotoxicity assay, MTT assay, and apoptosis assay Method, cell migration assay, etc.

依照本領域完整確立之方法,在試管內(in vitro )試驗執行良好的本發明之化合物及組成物的有效劑量及毒性接著可在使用小動物模式(例如小鼠或大鼠)的臨床前研究中測定,其中發現能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸以及蒽環二者為治療有效的。In accordance with well-established methods in the field, effective doses and toxicity of the compounds and compositions of the present invention that are well-executed in in vitro tests can then be used in preclinical studies using small animal models (eg, mice or rats) In the assay, it was found that siRNA, shRNA, antisense oligonucleotides and anthracycline that can downregulate the performance of the MADD splice variant of the IG20 gene are therapeutically effective.

在本發明之方法中所使用的任何醫藥組成物之治療有效劑量可先由動物模式估之以達循環血漿濃度範圍,其包括IC50 (亦即達成最大值一半的試驗化合物濃度)。自動物系統導出之劑量反應曲線接著可用於在人類中判定最初臨床研究的測試劑量。在各組成物之安全性測定中,投予劑量及頻率應符合或超過那些在臨床試驗中預期使用者。Any of the therapeutic composition in a pharmaceutically effective dosage of the method of the present invention may be used to estimate the first by an animal model of a circulating plasma concentration range that includes the IC 50 (i.e., to reach half of the maximum concentration of test compound). The dose response curve derived from the animal system can then be used to determine the test dose for initial clinical studies in humans. In the safety determination of each composition, the dosage and frequency of administration should meet or exceed those expected by users in clinical trials.

如本文所揭示,判定在本發明之組成物中的組份之劑量以確保連續或間歇投予之劑量不超過考量試驗動物中的結果及患者的個體狀況之後所判定之量。具體劑量本係取決於劑量程序、患者或個體動物的狀況諸如年齡、體重、性別、敏感性、進食、劑量週期、組合使用的藥物、疾病的嚴重性而改變。在某些條件下的適當劑量及劑量次數可由基於上述指數之試驗判定,但可根據醫師的判斷及各患者的情況(年齡、一般狀況、症狀的嚴重性、性別等)按照標準的臨床技術琢磨及最終決定。如本文所揭示,能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸的適當劑量通常為那些熟習本技術領域者可確定的劑量,蒽環的適當劑量通常為那些熟習本技術領域者可確定的劑量。在一實施態樣中,欲投予之siRNA的劑量可在1至10毫克/每公斤體重的範圍內。劑量可取決於所使用的劑型及所利用的投予路徑而在此範圍內改變。在一實施態樣中,可以每天投予各藥物之單一劑量。As disclosed herein, the dosage of the components in the composition of the present invention is determined to ensure that the dose administered continuously or intermittently does not exceed the amount determined after considering the results in the test animal and the individual condition of the patient. The specific dosage varies depending on the dosage procedure, the condition of the patient or individual animal, such as age, weight, sex, sensitivity, feeding, dosage cycle, combined drugs, and the severity of the disease. Under certain conditions, the appropriate dose and the number of doses can be determined by the test based on the above index, but can be pondered according to standard clinical techniques according to the judgment of the physician and the conditions of each patient (age, general condition, severity of symptoms, gender, etc.) And final decision. As disclosed herein, the appropriate doses of siRNA, shRNA and antisense oligonucleotides that can downregulate the performance of the MADD splice variant of the IG20 gene are generally those that can be determined by those skilled in the art. The dose can be determined by those skilled in the art. In one embodiment, the dose of siRNA to be administered may be in the range of 1 to 10 mg / kg body weight. The dosage can vary within this range depending on the dosage form used and the route of administration utilized. In one embodiment, a single dose of each drug can be administered daily.

本發明之組成物的毒性及治療功效可在實驗動物中以標準的醫藥程序測定,例如藉由測定LD50 (使50%之群體致命的劑量)及ED50 (使50%之群體治療有效的劑量)。在治療及毒性效果之間的劑量比為治療指數且其可以ED50 /LD50 之比表示。以展現大的治療指數之調配物/組合較佳。Toxicity and therapeutic efficacy of the composition of the present invention may be measured in a standard pharmaceutical procedures in experimental animals, e.g. measured by LD 50 (lethal to 50% of the dose groups) and the ED 50 (50% of the population so that therapeutically effective dose). Between the toxic dose and the therapeutic effect is the therapeutic index and it can ED 50 / LD 50 ratio of FIG. Formulations / combinations that exhibit a large therapeutic index are preferred.

由動物研究所獲得的數據可用於調配用於人類的劑量範圍。能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸以及蒽環於人類的治療有效劑量係落在循環濃度範圍內,其包括具有少許或不具有除了治療必需以外的毒性之ED50 。例如,能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸的此等治療有效的循環濃度(therapeutically effective circulating concentration)常為那些熟習本技術領域者可確定的濃度。能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸的欲投予之劑量可在1至10毫克/每公斤體重的範圍內。劑量可取決於所使用的劑型及所利用的投予路徑而在此範圍內改變。最好應於每天使用各藥物之單一劑量。The data obtained from the Animal Institute can be used to formulate a range of dosage for use in humans. The therapeutically effective doses of siRNA, shRNA and antisense oligonucleotides and anthracyclines that can downregulate the performance of the MADD splice variant of the IG20 gene are within the range of circulating concentrations, including those with little or no addition to treatment ED 50 other than toxicity. For example, these therapeutically effective circulating concentrations of siRNA, shRNA, and antisense oligonucleotides that can reduce the performance of the MADD splice variant of the IG20 gene are often determinable by those skilled in the art concentration. The dosage of siRNA, shRNA and antisense oligonucleotides that can reduce the performance of the MADD splice variant of the IG20 gene can be in the range of 1 to 10 mg / kg body weight. The dosage can vary within this range depending on the dosage form used and the route of administration utilized. It is best to use a single dose of each drug every day.

本發明之藥物組合不僅在相對低的劑量下非常有效,且亦具有除了治療必需以外的低毒性及產生少的副作用。事實上,本發明之蒽環僅有的常見副作用為那些經設計之本發明組合療法減輕的副作用,而源於使用本發明能夠調降IG20 基因之MADD剪接變異體的表現之siRNA、shRNA及反義寡核苷酸的最常見副作用係與RNA之注射相關聯,諸如暫時加重的發炎反應,包括增加的干擾素產生。藥理學 - 總結 The pharmaceutical combination of the present invention is not only very effective at relatively low doses, but also has low toxicity and produces fewer side effects than necessary for treatment. In fact, the only common side effects of the anthracycline of the present invention are those that are alleviated by the designed combination therapy of the present invention, and are derived from the use of the siRNA, shRNA and anti-reactions of the present invention that can downregulate the performance of the MADD splice variant of the IG20 gene The most common side effects of sense oligonucleotides are associated with RNA injections, such as temporarily exacerbated inflammatory reactions, including increased interferon production. Pharmacology - summary

本發明之活性主藥及其醫藥組成物,以及以其治療之方法的特徵在於獨特有利且不可預料的性質,使得如本文所主張之〝標的整體〞非顯而易見。組合及其醫藥組成物係在標準的可接受之可靠試驗程序中展現下列有價值的性質及特性。The active principal drug of the present invention, its pharmaceutical composition, and the method of treatment thereof are characterized by unique advantageous and unpredictable properties, making the "subject whole" as claimed herein unobvious. The combination and its pharmaceutical composition exhibit the following valuable properties and characteristics in standard acceptable and reliable test procedures.

結果證實MADD之siRNA減弱與多柔比星治療之組合對胰臟癌細胞的細胞死亡有協同效果,其中出於MADD之siRNA減弱與多柔比星治療之組合的細胞死亡量超過以MADD siRNA減弱之單一療法或多柔比星單一療法的相加效果。The results confirmed that the combination of MADD siRNA reduction and doxorubicin treatment has a synergistic effect on cell death of pancreatic cancer cells, in which the combination of MADD siRNA reduction and doxorubicin treatment combined cell death exceeded the MADD siRNA reduction The additive effect of monotherapy or doxorubicin monotherapy.

結果證實MADD之siRNA減弱與多柔比星治療之組合對肺癌細胞的細胞死亡有協同效果,其中出於MADD之siRNA減弱與多柔比星治療之組合的細胞死亡量超過以MADD siRNA減弱之單一療法或多柔比星單一療法的相加效果。The results confirmed that the combination of MADD siRNA reduction and doxorubicin treatment has a synergistic effect on the cell death of lung cancer cells, wherein the combination of MADD siRNA reduction and doxorubicin treatment combined cell death exceeded the single MADD siRNA reduction The additive effect of therapy or doxorubicin monotherapy.

結果證實MADD之siRNA減弱與多柔比星治療之組合對乳癌細胞的細胞死亡有協同效果,其中出於MADD之siRNA減弱與多柔比星治療之組合的細胞死亡數量超過以MADD siRNA減弱之單一療法或多柔比星單一療法的相加效果。The results confirmed that the combination of MADD siRNA reduction and doxorubicin treatment has a synergistic effect on the cell death of breast cancer cells, wherein the number of cell deaths due to the combination of MADD siRNA reduction and doxorubicin treatment exceeds that of MADD siRNA reduction The additive effect of therapy or doxorubicin monotherapy.

結果證實MADD之siRNA減弱與多柔比星治療之組合對胃癌細胞的細胞死亡有協同效果,其中出於MADD之siRNA減弱與多柔比星治療之組合的細胞死亡量超過以MADD siRNA減弱之單一療法或多柔比星單一療法的相加效果。The results confirmed that the combination of MADD siRNA reduction and doxorubicin treatment has a synergistic effect on cell death of gastric cancer cells, in which the combination of MADD siRNA reduction and doxorubicin treatment combined cell death exceeded the single MADD siRNA reduction The additive effect of therapy or doxorubicin monotherapy.

結果證實MADD之siRNA減弱與多柔比星治療之組合對慢性骨髓性白血病細胞的細胞死亡有協同效果,其中出於MADD之siRNA減弱與多柔比星治療之組合的細胞死亡量超過以MADD siRNA減弱之單一療法或多柔比星單一療法的相加效果。實施例 1 :蒽環化學療劑細胞毒性劑量曲線之測定 The results confirmed that the combination of MADD siRNA reduction and doxorubicin treatment has a synergistic effect on the cell death of chronic myeloid leukemia cells, wherein the combination of MADD siRNA reduction and doxorubicin treatment combined cell death exceeds the MADD siRNA Reduced additive effect of monotherapy or doxorubicin monotherapy. Example 1 : Determination of the cytotoxic dose curve of anthracycline chemotherapeutics

可易受蒽環治療之各種癌症的癌細胞株代表包括8505C(甲狀腺癌(thyroid carcinoma))、HTH7(甲狀腺癌(thyroid carcinoma))、C643(人類甲狀腺癌(human thyroid carcinoma))、AsPC-1(胰臟癌(pancreatic cancer))、SU.86.86(胰臟癌(pancreatic cancer))、CFPAC-1(胰臟癌(pancreatic cancer))、MCF7(乳腺癌(adenocarcinoma breast cancer))、SK-BR-3(乳癌(breast cancer))、OVCAR3(卵巢癌(ovarian cancer))、SKOV3(卵巢癌(ovarian cancer))、NCI-H522(非小細胞肺癌(non-small cell lung cancer))、NCI-H2122(非小細胞肺癌(non-small cell lung cancer))、NCI-H2227(小細胞肺癌(small cell lung cancer))、HepG2(肝細胞癌(liver hepatocellular carcinoma))、PLC/PRF/5(肝癌(liver hepatoma))、JIMT1(乳癌(breast cancer))、N87(胃癌(gastric carcinoma))及K562(慢性骨髓性白血病(chronic myelogenous leukemia))。細胞株可自馬里蘭州貝塞斯達(Bethesda)之國家癌症研究所(National Cancer Institute, Bethesda, MD)或美國菌種中心(American Type Culture Collection)或其他國家的類似組織獲得。可選擇該等細胞株,因為彼等全部皆表現較高水平的MADD剪接變異體、衍生自不同類型的癌症、全部皆需要新的治療方式、展現獨特的生長性質及由於根本不同的突變而對以化學療劑之不同的治療方式具有差別的易受性(differential susceptibility)。儘管該等細胞株的異質性(heterogeneity),但是在MADD減弱時可使得彼等易受治療性治療,因此顯示MADD 減弱在不同的癌症範圍之有潛力的有益效應。因為該等細胞株之獨特的生長性質,所以彼等係在經調配以支持彼等在培養時最優化生長的培養基中培養。The representative cancer cell lines of various cancers susceptible to anthracycline treatment include 8505C (thyroid carcinoma), HTH7 (thyroid carcinoma), C643 (human thyroid carcinoma), AsPC-1 (Pancreatic cancer), SU.86.86 (pancreatic cancer), CFPAC-1 (pancreatic cancer), MCF7 (adenocarcinoma breast cancer), SK-BR -3 (breast cancer), OVCAR3 (ovarian cancer), SKOV3 (ovarian cancer), NCI-H522 (non-small cell lung cancer), NCI- H2122 (non-small cell lung cancer), NCI-H2227 (small cell lung cancer), HepG2 (liver hepatocellular carcinoma), PLC / PRF / 5 (liver cancer (liver hepatoma)), JIMT1 (breast cancer), N87 (gastric carcinoma) and K562 (chronic myelogenous leukemia). Cell lines can be obtained from the National Cancer Institute (Bethesda, MD) or the American Type Culture Collection or similar organizations in other countries in Bethesda, Maryland. These cell lines can be selected because they all exhibit higher levels of MADD splice variants, are derived from different types of cancer, all require new treatment modalities, exhibit unique growth properties and are due to radically different mutations. Different treatments with chemotherapeutic agents have different susceptibility. Despite the heterogeneity of these cell lines, they can make them susceptible to therapeutic treatment when MADD weakens, thus showing the potential beneficial effects of MADD weakening in different cancer ranges. Because of the unique growth properties of these cell lines, they are cultivated in a medium that is formulated to support their optimal growth during cultivation.

8505C細胞係在以10%胎牛血清(fetal bovine serum)及1%青黴素(penicillin)/鏈黴素補充之RPMI-1640培養基中培養。The 8505C cell line was cultured in RPMI-1640 medium supplemented with 10% fetal bovine serum and 1% penicillin / streptomycin.

HTH7細胞係在以10%胎牛血清及1%青黴素/鏈黴素補充之RPMI-1640培養基中培養。The HTH7 cell line was cultured in RPMI-1640 medium supplemented with 10% fetal bovine serum and 1% penicillin / streptomycin.

C643細胞係在以10%胎牛血清及1%青黴素/鏈黴素補充之RPMI-1640培養基中培養。C643 cell line was cultured in RPMI-1640 medium supplemented with 10% fetal bovine serum and 1% penicillin / streptomycin.

AsPC-1細胞係在用於使用5% CO2 之空氣的培育箱中的經改質以含有2 mM L-麩醯胺酸(L-glutamine)、10 mM HEPES、1 mM丙酮酸鈉(sodium pyruvate)、4500毫克/公升之葡萄糖及1500毫克/公升(mg/L)之碳酸氫鈉的RPMI-1640培養基中培養。可能需要額外的碳酸氫鈉用於含有較高的CO2 百分比之培育箱中。基礎培養基(Base medium)係以10%胎牛血清及抗生素和抗黴菌劑補充。AsPC-1 cell line was modified in an incubator for air using 5% CO 2 to contain 2 mM L-glutamine, 10 mM HEPES, 1 mM sodium pyruvate (sodium pyruvate), 4500 mg / L glucose and 1500 mg / L sodium bicarbonate in RPMI-1640 medium. Additional sodium bicarbonate may be required for incubators containing higher percentages of CO 2 . Base medium is supplemented with 10% fetal calf serum and antibiotics and anti-fungal agents.

SU.86.86細胞係在用於使用5% CO2 之空氣的培育箱中的經改質以含有2 mM L-麩醯胺酸、10 mM HEPES、1 mM丙酮酸鈉、4500毫克/公升之葡萄糖及1500毫克/公升之碳酸氫鈉的RPMI-1640培養基中培養。可能需要額外的碳酸氫鈉用於含有較高的CO2 百分比之培育箱中。基礎培養基係以10%胎牛血清及抗生素和抗黴菌劑補充。SU.86.86 cell line was modified in an incubator for air with 5% CO 2 to contain 2 mM L-glutamic acid, 10 mM HEPES, 1 mM sodium pyruvate, 4500 mg / L glucose And 1500 mg / L sodium bicarbonate in RPMI-1640 medium. Additional sodium bicarbonate may be required for incubators containing higher percentages of CO 2 . The basic culture medium is supplemented with 10% fetal calf serum, antibiotics and antifungal agents.

CFPAC-1細胞係在含有4 mM L-麩醯胺酸、4500毫克/公升之葡萄糖及1500毫克/公升之碳酸氫鈉的伊斯寇氏改質之杜貝克氏培養基(Iscove’s Modified Dulbecco’s Medium)(IMDM)中培養。此基礎培養基係以10%胎牛血清及抗生素和抗黴菌劑補充。The CFPAC-1 cell line is in Iscove's Modified Dulbecco's Medium (Iscove's Modified Dulbecco's Medium) containing 4 mM L-glutamic acid, 4500 mg / L glucose and 1500 mg / L sodium bicarbonate. IMDM). This basic medium is supplemented with 10% fetal calf serum and antibiotics and antifungal agents.

MCF7細胞係在經改質以含有厄爾式平衡鹽溶液(Earle’s Balanced Salt Solution)、非必需胺基酸、2 mM L-麩醯胺酸、1 mM丙酮酸鈉及1500毫克/公升之碳酸氫鈉的伊格氏最低必需培養基(Eagle’s minimum essential mediu)中培養。此基礎培養基係補充0.01毫克/毫升之人類重組胰島素、胎牛血清至10%最終濃度。MCF7 cell line was modified to contain Earle's Balanced Salt Solution, non-essential amino acids, 2 mM L-glutamic acid, 1 mM sodium pyruvate, and 1500 mg / L bicarbonate Sodium is cultured in Eagle's minimum essential mediu. This basic medium is supplemented with 0.01 mg / ml human recombinant insulin and fetal bovine serum to a final concentration of 10%.

SK-BR-3細胞係在經改質以含有1.5 mM L-麩醯胺酸及2200毫克/公升之碳酸氫鈉的麥克寇伊氏5A培養基(McCoy’s 5A Medium)中培養。此基礎培養基係以10%胎牛血清及抗生素和抗黴菌劑補充。The SK-BR-3 cell line was cultured in McCoy's 5A Medium modified to contain 1.5 mM L-glutamic acid and 2200 mg / L sodium bicarbonate. This basic medium is supplemented with 10% fetal calf serum and antibiotics and antifungal agents.

OVCAR3細胞係在用於使用5% CO2 之空氣的培育箱中的經改質以含有2 mM L-麩醯胺酸、10 mM HEPES、1 mM丙酮酸鈉、4500毫克/公升之葡萄糖及1500毫克/公升之碳酸氫鈉的RPMI-1640培養基中培養。此基礎培養基係補充0.01毫克/毫升(mg/ml)之牛胰島素、抗生素和抗黴菌劑及胎牛血清至20%最終濃度。The OVCAR3 cell line was modified in an incubator for air using 5% CO 2 to contain 2 mM L-glutamic acid, 10 mM HEPES, 1 mM sodium pyruvate, 4500 mg / L glucose and 1500 Milligram / liter sodium bicarbonate in RPMI-1640 medium. This basic medium is supplemented with 0.01 milligrams per milliliter (mg / ml) of bovine insulin, antibiotics and antimycotics and fetal bovine serum to a final concentration of 20%.

SKOV3細胞係在經改質以含有1.5 mM L-麩醯胺酸及2200毫克/公升之碳酸氫鈉的麥克寇伊氏5A培養基(McCoy’s 5A Medium)中培養。此基礎培養基係以10%胎牛血清及抗生素和抗黴菌劑補充。The SKOV3 cell line was cultured in McCoy's 5A Medium modified to contain 1.5 mM L-glutamic acid and 2200 mg / L sodium bicarbonate. This basic medium is supplemented with 10% fetal calf serum and antibiotics and antifungal agents.

NCI-H522細胞係在用於使用5% CO2 之空氣的培育箱中的經改質以含有2 mM L-麩醯胺酸、10 mM HEPES、1 mM丙酮酸鈉、4500毫克/公升之葡萄糖及1500毫克/公升之碳酸氫鈉的RPMI-1640培養基中培養。此基礎培養基係以10%胎牛血清及抗生素和抗黴菌劑補充。NCI-H522 cell line was modified in an incubator for air using 5% CO 2 to contain 2 mM L-glutamic acid, 10 mM HEPES, 1 mM sodium pyruvate, 4500 mg / L glucose And 1500 mg / L sodium bicarbonate in RPMI-1640 medium. This basic medium is supplemented with 10% fetal calf serum and antibiotics and antifungal agents.

NCI-H2122細胞係在用於使用5% CO2 之空氣的培育箱中的經改質以含有2 mM L-麩醯胺酸、10 mM HEPES、1 mM丙酮酸鈉、4500毫克/公升之葡萄糖及1500毫克/公升之碳酸氫鈉的RPMI-1640培養基中培養。此基礎培養基係以10%胎牛血清及抗生素和抗黴菌劑補充。The NCI-H2122 cell line was modified in an incubator for air using 5% CO 2 to contain 2 mM L-glutamic acid, 10 mM HEPES, 1 mM sodium pyruvate, 4500 mg / L glucose And 1500 mg / L sodium bicarbonate in RPMI-1640 medium. This basic medium is supplemented with 10% fetal calf serum and antibiotics and antifungal agents.

NCI-H2227細胞係在含有0.005毫克/毫升之胰島素、0.01毫克/毫升之運鐵蛋白(Transferrin)、30nM亞硒酸鈉(Sodium selenite)、10 nM氫皮質酮(Hydrocortisone)、10 nM β-雌二醇(beta-estradiol)、額外的2mM L-麩醯胺酸(4.5 mM之最終濃度)、5%胎牛血清的DMEM:F12培養基中培養。The NCI-H2227 cell line contains 0.005 mg / ml insulin, 0.01 mg / ml transferrin, 30 nM sodium selenite, 10 nM Hydrocortisone, 10 nM β-estrogen Glycol (beta-estradiol), additional 2 mM L-glutamic acid (4.5 mM final concentration), 5% fetal bovine serum in DMEM: F12 medium.

HepG2細胞係在以10%胎牛血清及1%青黴素/鏈黴素補充之伊格氏最低必需培養基(Eagle’s Minimum Essential Medium)(EMEM)中培養。The HepG2 cell line was cultured in Eagle ’s Minimum Essential Medium (EMEM) supplemented with 10% fetal bovine serum and 1% penicillin / streptomycin.

PLC/PRF/5細胞係在以10%胎牛血清及1%青黴素/鏈黴素補充之伊格氏最低必需培養基(EMEM)中培養。The PLC / PRF / 5 cell line was cultured in the minimal essential medium (EMEM) supplemented with 10% fetal bovine serum and 1% penicillin / streptomycin.

K562細胞係在以10%胎牛血清及1%青黴素/鏈黴素補充的伊斯寇氏改質之杜貝克氏培養基(Iscove’s Modified Dulbecco’s Medium)(IMDM)中培養。The K562 cell line was cultured in Iscove ’s Modified Dulbecco ’s Medium (IMDM) supplemented with 10% fetal bovine serum and 1% penicillin / streptomycin.

HCT116 細胞係在以10%胎牛血清及1%青黴素/鏈黴素補充之RPMI-1640培養基中培養。The HCT116 cell line was cultured in RPMI-1640 medium supplemented with 10% fetal bovine serum and 1% penicillin / streptomycin.

AGS 細胞係在以10%胎牛血清及1%青黴素/鏈黴素補充之RPMI-1640培養基中培養。The AGS cell line was cultured in RPMI-1640 medium supplemented with 10% fetal bovine serum and 1% penicillin / streptomycin.

JIMT1細胞係在具有10%胎牛血清及1X抗生素-抗黴菌溶液(Gibco)的完全RPMI培養基(GIBCO)中培養。抗生素-抗黴菌溶液含有10,000單位/毫升(units/mL)之青黴素、10,000微克/毫升(µg/mL)之鏈黴素及25微克/毫升之Gibco兩性黴素B(Amphotericin B)。The JIMT1 cell line was cultured in complete RPMI medium (GIBCO) with 10% fetal bovine serum and 1X antibiotic-antimycotic solution (Gibco). The antibiotic-antimycotic solution contains 10,000 units / ml penicillin, 10,000 μg / ml streptomycin and 25 μg / ml Gibco amphotericin B (Amphotericin B).

N87細胞係在以10%胎牛血清及1%青黴素/鏈黴素補充之RPMI-1640培養基中培養。The N87 cell line was cultured in RPMI-1640 medium supplemented with 10% fetal bovine serum and 1% penicillin / streptomycin.

所有的細胞株皆維持在37℃具有5% CO2 之加濕氛圍中。All cell lines were maintained in a humidified atmosphere with 5% CO 2 at 37 ° C.

蒽環化學療劑可於市場上以醫師處方自藥房以FDA核准之藥物獲得。Anthracycline chemotherapeutic agents are available on the market in the form of physician-prescribed pharmacies and approved by the FDA.

所有的細胞係在如上述具有適當的補充劑之彼等各自的培養基中培養。 表1.製程綜述 - 附著型細胞株 ( Adherent cell line) 製程綜述 - 懸浮型細胞株 ( Suspension cell line) All cell lines are cultured in their respective media with appropriate supplements as described above. Table 1. Summary of Process - adhesion type cell line (Adherent cell line) Process Summary - type cell line suspension (Suspension cell line)

在第0天,將附著型細胞接種在96槽孔盤中(Corning;目錄編號:353072)且經隔夜培育。On day 0, adherent cells were seeded in 96-well plates (Corning; catalog number: 353072) and incubated overnight.

在第0天,將懸浮型細胞接種在96槽孔盤中(Corning;目錄編號:353072)且添加蒽環化學療劑。On day 0, suspension cells were seeded in 96-well plates (Corning; catalog number: 353072) and anthracycline chemotherapeutic agents were added.

在經隔夜培育(第1天)之後,以一式三份(triplicate)添加6個不同濃度的各化學治療藥物。After overnight incubation (day 1), 6 different concentrations of each chemotherapeutic drug were added in triplicate.

各個細胞株模式的細胞毒性可利用MTT檢定法所測量的經比較之細胞毒性為基礎評估。The cytotoxicity of each cell line model can be evaluated based on the comparative cytotoxicity measured by the MTT assay.

針對代謝活性之 MTT 染色 :MTT(溴化3-[4,5-二甲基噻唑-2-基]-2,5-二苯基四唑鎓((3-[4,5-Dimethylthiazol-2-yl]-2,5-diphenyltetrazolium bromide);噻唑藍(Thiazolyl blue))可購自Sigma Aldrich(目錄編號:M5655)且以5毫克/毫升之濃度溶於無菌DPBS中。 MTT staining for metabolic activity : MTT (3- [4,5-dimethylthiazol-2-yl] -2,5-diphenyltetrazolium bromide ((3- [4,5-Dimethylthiazol-2 -yl] -2,5-diphenyltetrazolium bromide); Thiazolyl blue) can be purchased from Sigma Aldrich (catalog number: M5655) and dissolved in sterile DPBS at a concentration of 5 mg / ml.

於附著型細胞,在藥物暴露24及48小時(分別於第2天及第3天)之後,將10微升(µl)所製備之MTT溶液添加至96槽孔盤的每一槽孔中。將盤在37℃下於加濕之CO2 培育箱中培育2小時。在2小時之後,在生物安全罩(biosafety hood)內部使用真空(vacuum)抽吸(aspirate)培養基。在活細胞中形成的紫色甲臢(formazan)晶體以添加100微升二甲亞碸(Dimethyl sulfoxide)(Thermo Fisher Scientific;目錄編號:D128-500)溶解。將盤保持在振盪器上10分鐘以完全溶解晶體且使用Bio-Rad iMark微量盤讀取機(Bio-Rad iMark microplate reader)記錄在595奈米(nm)之吸光度(absorbance)。In adherent cells, after 24 and 48 hours of drug exposure (on days 2 and 3, respectively), 10 microliters (µl) of the prepared MTT solution was added to each well of a 96-well plate. The dish was incubated at 37 ° C in a humidified CO 2 incubator for 2 hours. After 2 hours, aspirate the culture medium using a vacuum inside the biosafety hood. Purple formazan crystals formed in living cells were dissolved by adding 100 microliters of dimethyl sulfoxide (Thermo Fisher Scientific; catalog number: D128-500). The disk was kept on the shaker for 10 minutes to completely dissolve the crystals and the absorbance at 595 nanometers (nm) was recorded using a Bio-Rad iMark microplate reader.

在懸浮型細胞中,在藥物暴露24及48小時(分別於第1天及第2天)之後,將10微升所製備之MTT溶液添加至96槽孔盤的每一槽孔中。將盤在37℃下於加濕之CO2 培育箱中培育2小時。在培育2小時之後,添加等體積的溶解劑(在50%二甲基甲醯胺(Dimethylformamide)中的20% SDS)且將盤在37℃下於加濕之CO2 培育箱中經隔夜培育。在經隔夜培育之後,將盤保持在振盪器上10分鐘以完全溶解晶體且使用Bio-Rad iMark微量盤讀取機記錄在595奈米之吸光度。In suspension cells, after 24 and 48 hours of drug exposure (on Day 1 and Day 2, respectively), 10 μl of the prepared MTT solution was added to each well of a 96-well plate. The dish was incubated at 37 ° C in a humidified CO 2 incubator for 2 hours. After 2 hours of incubation, an equal volume of dissolving agent (20% SDS in 50% Dimethylformamide) was added and the dish was incubated overnight at 37 ° C in a humidified CO 2 incubator . After overnight incubation, the disk was kept on a shaker for 10 minutes to completely dissolve the crystals and the absorbance at 595 nm was recorded using a Bio-Rad iMark microplate reader.

細胞生存百分比係使用MS excel計算。使用GraphPad Prism軟體計算EC50 。MTT檢定法表明整體細胞死亡。The cell survival percentage was calculated using MS excel. EC 50 is calculated using GraphPad Prism software. The MTT assay indicates that the whole cell is dead.

研究證實以蒽環化學療劑治療癌細胞展現基於癌細胞死亡可測量的劑量反應輪廓(dose response profile)。實施例 2 :含 Map 激酶活化死亡结構域蛋白 (MADD)siRNA 轉染 Studies have confirmed that treatment of cancer cells with anthracycline chemotherapeutic agents exhibits a measurable dose response profile based on cancer cell death. Example 2 : Transfection of siRNA containing Map kinase activated death domain protein (MADD)

可設計靶定MADD剪接變異體的外顯子13L之包含核酸分子的siRNA、shRNA及/或反義寡核苷酸。合成包含中心19個bp雙鏈與2個鹼基3’-突出端((2 -base 3’-overhang))的siRNA。而且,合成具有19個bp雙鏈與2個鹼基3’-突出端的非特異性亂序型siRNA(non-specific Scramble siRNA)以提供陰性對照(negative control) siRNA。所使用的siRNA(雙股型雙鏈)之序列為:MADD siRNA : 5’ - GAUUGUCAUAGAUUCGCCGTT - 3’(SEQ ID NO:4)亂序型 siRNA : 5’ - UUGCUAAGCGUCGGUCAAUTT - 3’(SEQ ID NO:5)SiRNA, shRNA and / or antisense oligonucleotides containing nucleic acid molecules that target the exon 13L of the MADD splice variant can be designed. An siRNA containing a 19-bp double strand in the center and a 2 base 3'-overhang ((2-base 3'-overhang)) was synthesized. Furthermore, a non-specific Scramble siRNA having 19 bp double strands and 2 base 3'-overhangs was synthesized to provide a negative control siRNA. The sequence of the siRNA (double-stranded double-stranded) used is: MADD siRNA : 5 '-GAUUGUCAUAGAUUCGCCGTT-3' (SEQ ID NO: 4) scrambled siRNA : 5 '-UUGCUAAGCGUCGGUCAAUTT-3' (SEQ ID NO: 5 )

Lipofectamine RNAimax(轉染介導試劑 (transfection mediating reagent))為在水中具有正表面電荷之陽離子單層脂質體結構(cationic unilamellar liposomal structure)。脂質陽離子電荷與siRNA中的核酸之負的磷酸根基團(negative phosphate group)交互反應且與細胞膜形成脂質體/siRNA轉染複合體(liposome/siRNA transfection complex)。此複合體可易於與細胞膜融合(fuse)且經由胞飲作用(endocytosis)在細胞內部遞輸siRNA。   siRNA及轉染試劑的給量(dosing)需就各細胞株決定。通常使用製造商建議之每立方毫米組織培養盤區域的轉染試劑體積且可改變siRNA濃度。對大多數的細胞而言,以10 nM siRNA足以在轉染48小時內造成MADD減弱(knock-down)。轉染 ( Transfection)Lipofectamine RNAimax (transfection mediating reagent) is a cationic unilamellar liposomal structure with positive surface charge in water. The lipid cationic charge interacts with the negative phosphate group of the nucleic acid in the siRNA and forms a liposome / siRNA transfection complex with the cell membrane. This complex can easily fuse with the cell membrane and deliver siRNA inside the cell via endocytosis. Dosing of siRNA and transfection reagents should be determined for each cell line. The volume of transfection reagent per cubic millimeter of tissue culture disc area recommended by the manufacturer is usually used and the siRNA concentration can be changed. For most cells, 10 nM siRNA is sufficient to cause knock-down of MADD within 48 hours of transfection. Transfection (Transfection):

細胞係在37℃下,5% CO2 培育箱中,在含有5% CO2 之加濕氛圍(humidified atmosphere)中於ATCC建議之具有10%胎牛血清(Gibco;目錄編號:26140-079)及1x抗生素/抗黴菌劑(Gibco;目錄編號:15240096)的培養基中培養及維持。將用於轉染之細胞接種在96槽孔盤中(在轉染前24小時以達到60至80%之匯合(confluence))。The cell line is in a 5% CO 2 incubator at 37 ° C in a humidified atmosphere containing 5% CO 2 with 10% fetal bovine serum (Gibco; catalog number: 26140-079) recommended by the ATCC. And 1x antibiotic / antimycotic agent (Gibco; catalog number: 15240096) culture and maintenance. Cells used for transfection were seeded in 96-well plates (24 hours before transfection to achieve 60 to 80% confluence).

在下文提出所測試之各細胞株的轉染反應之細節。The details of the transfection response of each cell line tested are presented below.

轉染反應混合物係按照製造商說明書的建議以一式三份(triplicate)製備。簡言之,在試管A中,使100 µM siRNA原液(stock solution)之等分試樣(aliquot)於5微升(5µl)OPTI-MEM中稀釋以給出每一槽孔10 nM siRNA的最終濃度。在試管B中,使0.3微升RNAiMax(Thermo Fisher Scientific)試劑於4.7微升OPTI-MEM中混合。將來自試管A及B的內容物混合且在室溫下培育15分鐘。將反應混合物添加至盤中且在37℃下培育24小時、48小時及72小時。在48小時之後更換培養基。RNA 分離The transfection reaction mixture was prepared in triplicate as recommended by the manufacturer's instructions. Briefly, in test tube A, an aliquot of 100 µM siRNA stock solution (aliquot) was diluted in 5 µl (5 µl) OPTI-MEM to give a final 10 nM siRNA per well concentration. In Test Tube B, 0.3 microliter RNAiMax (Thermo Fisher Scientific) reagent was mixed in 4.7 microliter OPTI-MEM. The contents from test tubes A and B were mixed and incubated at room temperature for 15 minutes. The reaction mixture was added to the dish and incubated at 37 ° C for 24 hours, 48 hours and 72 hours. The medium was changed after 48 hours. RNA isolation :

總RNA係使用Trizol試劑(Ambion;目錄編號:15596018)萃取。對96槽孔盤的各槽孔添加150微升Trizol以懸浮及均質化(homogenize)細胞懸浮液。將一式三份樣品(triplicate sample)集在一起以進一步處理。將細胞在室溫下培育10分鐘。將250微升氯仿(Fisher;目錄編號:C606-1)添加至細胞懸浮液中。將樣品在室溫下培育3分鐘。將試管在4℃下以10,000 rpm離心15分鐘。將頂層移至新鮮試管且添加600微升異丙醇(Fisher;目錄編號:A451-1)。將試管在室溫下培育10分鐘。接著將試管在4℃下以10,000 rpm離心10分鐘。丟棄上清液清且將沈澱物以1毫升75%乙醇(Decon;目錄編號:DSP-AZ-1)清洗。將試管在4℃下以7500 rpm再離心5分鐘。將沈澱物經空氣乾燥且溶於20微升DEPC水(Fisher;目錄編號:BP561-1)中。RNA係使用Thermo Fisher Scientific NanoDrop One定量。使用A260/280及A260/230驗證樣品的純度。反轉錄酶 PCRTotal RNA was extracted using Trizol reagent (Ambion; catalog number: 15596018). To each well of a 96-well plate, 150 microliters of Trizol was added to suspend and homogenize the cell suspension. Triplicate samples were collected together for further processing. The cells were incubated at room temperature for 10 minutes. 250 microliters of chloroform (Fisher; catalog number: C606-1) was added to the cell suspension. The samples were incubated at room temperature for 3 minutes. The test tube was centrifuged at 10,000 rpm for 15 minutes at 4 ° C. The top layer was moved to a fresh tube and 600 microliters of isopropanol (Fisher; catalog number: A451-1) was added. Incubate the test tube at room temperature for 10 minutes. Next, the test tube was centrifuged at 10,000 rpm for 10 minutes at 4 ° C. The supernatant was discarded and the precipitate was washed with 1 ml of 75% ethanol (Decon; catalog number: DSP-AZ-1). The test tube was centrifuged at 7500 rpm for 5 minutes at 4 ° C. The precipitate was air dried and dissolved in 20 microliters of DEPC water (Fisher; catalog number: BP561-1). The RNA line was quantified using Thermo Fisher Scientific NanoDrop One. Use A260 / 280 and A260 / 230 to verify the purity of the sample. Reverse transcriptase PCR :

對於RT-PCR,使用MADD及β-肌動蛋白(β-actin)(內部裝載對照組(internal loading control))引子(primer)。所使用的引子之序列為:MADD 13L 正向 :5’- AGC CCC AAT ATG GCT TTC CC-3’(SEQ ID NO:6)MADD 13L 反向 :5’-CTG ATC CAC TAA CGC CCT CC-3’(SEQ ID NO:7)β- 肌動蛋白正向 :5’-ATCTGGCACCACACCTTCTAC AATGAGCTGCG-3’(SEQ ID NO:8)β- 肌動蛋白反向 :5’-CGTCATACTCCTGCTTGCTG ATCCACATCTGC-3’(SEQ ID NO:9)For RT-PCR, MADD and β-actin (internal loading control) primers were used. The sequence of the primers used is: MADD 13L forward : 5'- AGC CCC AAT ATG GCT TTC CC-3 '(SEQ ID NO: 6) MADD 13L reverse : 5'-CTG ATC CAC TAA CGC CCT CC-3 '(SEQ ID NO: 7) β- actin forward : 5'-ATCTGGCACCACACCTTCTAC AATGAGCTGCG-3' (SEQ ID NO: 8) β- actin reverse : 5'-CGTCATACTCCTGCTTGCTG ATCCACATCTGC-3 '(SEQ ID NO: 9)

對於擴增(amplification),使用Qiagen One step RT_PCR kit(目錄編號:210212)及BioRaD T100熱循環儀(thermocycler)。在下文提出RT-PCR之說明。 表2. RT-PCR之擴增製程為:   1. 50℃經30分鐘   2. 95℃經15分鐘   3. 94℃經50秒   4. 55℃經50秒   5. 72℃經60秒   6. 重複步驟3至5,39次   7. 72℃經7分鐘   8. 保持在4℃5% 聚丙烯醯胺凝膠電泳For amplification, Qiagen One step RT_PCR kit (catalog number: 210212) and BioRaD T100 thermal cycler (thermocycler) were used. A description of RT-PCR is presented below. Table 2. The RT-PCR amplification process is: 1. 50 ° C for 30 minutes 2. 95 ° C for 15 minutes 3. 94 ° C for 50 seconds 4. 55 ° C for 50 seconds 5. 72 ° C for 60 seconds 6. Repeat steps 3 to 5. 39 times 7. 72 ° C for 7 minutes 8. Keep at 4 ° C 5% polypropylene amide gel electrophoresis :

聚丙烯醯胺凝膠(polyacrylamidegel)係以手動澆注且使用下列配方製備凝膠。依序添加所有的組份。 表3. Polyacrylamide gel (polyacrylamidegel) was manually poured and the following formulation was used to prepare the gel. Add all the components in order. table 3.

載於凝膠之前,將整個樣品體積(25µl)與5µl的6x 核酸緩衝液(Thermo Fisher Scientific;目錄編號:RO611)混合。凝膠電泳(gel electrophoresis)係使用BioRad Protean II Xi Cell在200伏特下進行2小時。凝膠係使用100毫升染色操作溶液(working staining solution)(在0.5x TBE中的1微克/毫升之溴化乙錠(Ethidium Bromide))染色30分鐘。溴化乙錠係購自BioRad(目錄編號:161-0433)。使用BioRad ChemiDoc MP成像系統(BioRad ChemiDoc MP Imaging System)擷取影像。Before loading in the gel, the entire sample volume (25 µl) was mixed with 5 µl of 6x nucleic acid buffer (Thermo Fisher Scientific; catalog number: RO611). Gel electrophoresis was performed using BioRad Protean II Xi Cell at 200 volts for 2 hours. The gel was stained with 100 ml of working staining solution (1 μg / ml of Ethidium Bromide in 0.5x TBE) for 30 minutes. Ethidium bromide was purchased from BioRad (catalog number: 161-0433). Use BioRad ChemiDoc MP Imaging System (BioRad ChemiDoc MP Imaging System) to capture images.

該等研究證實本實驗的核酸之有效轉染,以及區別轉染試劑對MADD表現(MADD減弱)及細胞生存之效果。實施例 3 :蒽環化學療劑對有及無 MADD 減弱 ( MADD knockdown) 之癌細胞的細胞死亡之效果 These studies confirmed the effective transfection of nucleic acids in this experiment, as well as the effect of distinguishing transfection reagents on MADD performance (MADD reduction) and cell survival. Example 3: Effect of cancer death anthracycline chemotherapeutic agent and there is no weakening MADD (knockdown of MADD) of cells

可測定蒽環化學療劑在有或無MADD調降下對癌細胞之細胞毒性效果。The cytotoxic effect of anthracycline chemotherapeutic agents on cancer cells with or without MADD modulation can be determined.

SU.86.86、H2227、C643、PLC/PRF/5、JIMT1、N87、K562及H522細胞係在如上述之具有適當的補充劑之彼等各自的培養基中培養。 表4.製程綜述 The SU.86.86, H2227, C643, PLC / PRF / 5, JIMT1, N87, K562, and H522 cell lines were cultured in their respective mediums with appropriate supplements as described above. Table 4. Process overview

細胞係如上述於37℃在含有5% CO2 之加濕氛圍中培養及維持。在第0天,將細胞接種在100 mm3 組織培養盤中(Corning;目錄編號:353003)以達到60至70%之匯合(confluence)。同時,亦將細胞接種在一個96槽孔盤中(Corning;目錄編號:353072),供再接種(reseeding)前的生存率分析。The cell line was cultured and maintained at 37 ° C in a humidified atmosphere containing 5% CO 2 as described above. On day 0, the cells were seeded in 100 mm 3 tissue culture dishes (Corning; catalog number: 353003) to achieve 60 to 70% confluence. At the same time, cells were also seeded in a 96-well plate (Corning; catalog number: 353072) for survival analysis before reseeding.

在12至18小時(第1天)之後,將細胞以亂序型或MADD siRNA轉染,以10 nM濃度。所使用的siRNA(雙股型)之序列為:MADD siRNA :5’ - GAUUGUCAUAGAUUCGCCGTT - 3’(SEQ ID NO:4)亂序型 siRNA :5’ - UUGCUAAGCGUCGGUCAAUTT - 3’(SEQ ID NO:5)After 12 to 18 hours (Day 1), cells were transfected with scrambled or MADD siRNA at a concentration of 10 nM. The sequence of the siRNA (double-stranded) used is: MADD siRNA : 5 '-GAUUGUCAUAGAUUCGCCGTT-3' (SEQ ID NO: 4) scrambled siRNA : 5 '-UUGCUAAGCGUCGGUCAAUTT-3' (SEQ ID NO: 5)

原液siRNA在1x siRNA溶解緩衝液(GE Healthcare;目錄編號:B-002000-UB-700)中配置 (reconstitute)成100 µM濃度且貯存在-20℃。為了轉染,製備每一盤之反應混合物:添加30 µl lipofectamine RNAimax(Invitrogen;目錄編號:13778-150)、1毫升Opti-MEM(Gibco;目錄編號:31985062)及原液siRNA之等分試樣以獲得每一盤或含有70%匯合之細胞的孔盤之槽有10 nM siRNA的最終濃度。將反應混合物在室溫下培育10分鐘。將轉染混合物逐滴添加至含有在具有10% FBS但沒有抗生素之RPMI培養基中的70%匯合細胞的盤上。轉染混合物也添加至鋪在96槽孔盤中的細胞。The stock siRNA was reconstituted to a concentration of 100 µM in 1x siRNA lysis buffer (GE Healthcare; catalog number: B-002000-UB-700) and stored at -20 ° C. For transfection, prepare the reaction mixture for each plate: add 30 µl of lipofectamine RNAimax (Invitrogen; catalog number: 13778-150), 1 ml of Opti-MEM (Gibco; catalog number: 31985062) and aliquots of stock siRNA to Obtain a final concentration of 10 nM siRNA for each plate or well plate containing 70% confluent cells. The reaction mixture was incubated at room temperature for 10 minutes. The transfection mixture was added dropwise to a dish containing 70% confluent cells in RPMI medium with 10% FBS but no antibiotics. The transfection mixture was also added to the cells plated in 96-well plates.

細胞係在37℃於加濕的CO2 培育箱中培育24小時,且在隔天(第2天),將培養基以完全RPMI(10% FBS及1x 抗生素/抗黴菌劑)置換。更換所有細胞的培養基。The cell lines were incubated in a humidified CO 2 incubator at 37 ° C for 24 hours, and on the next day (day 2), the medium was replaced with complete RPMI (10% FBS and 1x antibiotic / antimycotic agent). Change the medium of all cells.

在轉染48小時之後(第3天),以0.05%胰蛋白酶(Gibco;目錄編號:25-300-054)處理以收穫(harvest)細胞。簡言之,細胞以DPBS(Gibco;目錄編號:14190250)清洗且以胰蛋白酶處理5分鐘。接著使細胞脫附(detach)且收集在10毫升完全培養基(complete media)中。細胞懸浮液以1500 rpm離心10分鐘。丟棄上清液且將細胞沈澱物懸浮在5毫升完全RPMI中。所有的細胞[對照組(未經處理)、轉染之亂序型(Scramble)及MADD siRNA]係於再接種前使用血球計(hemocytometer)計數。針對細胞計數,使細胞懸浮液與0.4%錐蟲藍(Lonza;目錄編號:17-942E)以等體積混合。將10微升細胞懸浮液(具有錐蟲藍(trypan Blue))放在血球計上且計數細胞。執行兩次計數且使用平均值判定細胞數量。48 hours after transfection (day 3), the cells were harvested by treatment with 0.05% trypsin (Gibco; catalog number: 25-300-054). Briefly, cells were washed with DPBS (Gibco; catalog number: 14190250) and treated with trypsin for 5 minutes. The cells were then detached and collected in 10 ml of complete media. The cell suspension was centrifuged at 1500 rpm for 10 minutes. The supernatant was discarded and the cell pellet was suspended in 5 ml of complete RPMI. All cells [control group (untreated), transfected Scramble and MADD siRNA] were counted using a hemocytometer before re-inoculation. For cell counting, the cell suspension was mixed with 0.4% trypan blue (Lonza; catalog number: 17-942E) in equal volumes. Place 10 microliters of cell suspension (with trypan Blue) on the hemocytometer and count the cells. Perform two counts and use the average to determine the number of cells.

將等數量的細胞[對照組(未經處理)、轉染之亂序型及MADD siRNA]接種在96槽孔盤中。在同一天(轉染48小時之後)進行MTT檢定法以測定於再接種前的相對細胞生存率。Equal numbers of cells [control group (untreated), transfected disordered type and MADD siRNA] were seeded in 96-well plates. The MTT assay was performed on the same day (48 hours after transfection) to determine the relative cell survival rate before re-inoculation.

在第4天,當細胞適當地附著在96槽孔盤中且保持彼等的形狀時,添加藥物。On Day 4, when the cells were properly attached to the 96-well plate and maintained their shapes, the drug was added.

表5. table 5.

所有的藥物係在添加至細胞前的同一天稀釋於完全培養基中。於未經處理之細胞,將培養基以完全培養基置換。以200微升培養基體積(具有或不具有藥物)用於藥物治療檢定法。使盤在37℃於加濕的CO2 培育箱中培育24小時、48小時及72小時。All drug lines were diluted in complete medium on the same day before addition to the cells. For untreated cells, the medium is replaced with complete medium. A volume of 200 microliters of culture medium (with or without drugs) was used for the drug therapy assay. The plates were incubated at 37 ° C in a humidified CO 2 incubator for 24 hours, 48 hours, and 72 hours.

進行MTT檢定法以測定在如上述之藥物治療後的相對生存率。The MTT assay was performed to determine the relative survival rate after drug treatment as described above.

針對代謝活性之 MTT 染色 :MTT(溴化3-[4,5-二甲基噻唑-2-基]-2,5-二苯基四唑鎓(3-[4,5-Dimethylthiazol-2-yl]-2,5-diphenyltetrazolium bromide);噻唑藍(Thiazolyl blue))係購自Sigma Aldrich(目錄編號:M5655)。將MTT以5毫克/毫升之濃度溶於無菌DPBS中且通過0.45 µM針筒過濾器(Corning;目錄編號:431220)過濾。對96槽孔盤的每一槽孔添加10微升MTT溶液。使盤在37℃於加濕之CO2 培育箱中培育2小時。在2小時之後,在生物安全罩(biosafety hood)內部使用真空抽吸(aspirate)培養基。在活細胞中形成的紫色晶體係藉由添加100微升二甲亞碸(Thermo Fisher Scientific;目錄編號:D128-500)而溶解。將盤保持在振盪器上10分鐘以完成晶體溶解且使用Bio-Rad iMark微量盤讀取機記錄在595奈米(nm)之吸光度。 MTT staining for metabolic activity : MTT (3- [4,5-dimethylthiazol-2-yl] -2,5-diphenyltetrazolium bromide (3- [4,5-Dimethylthiazol-2- yl] -2,5-diphenyltetrazolium bromide); Thiazolyl blue (Thiazolyl blue) was purchased from Sigma Aldrich (catalog number: M5655). MTT was dissolved in sterile DPBS at a concentration of 5 mg / ml and filtered through a 0.45 µM syringe filter (Corning; catalog number: 431220). Add 10 microliters of MTT solution to each well of the 96-well plate. The dish was incubated at 37 ° C for 2 hours in a humidified CO 2 incubator. After 2 hours, aspirate the culture medium inside the biosafety hood. The purple crystal system formed in living cells was dissolved by adding 100 microliters of dimethylsulfoxide (Thermo Fisher Scientific; catalog number: D128-500). The disk was kept on the shaker for 10 minutes to complete crystal dissolution and the absorbance at 595 nanometers (nm) was recorded using a Bio-Rad iMark microplate reader.

數據係以MS excel軟體分析。相對生存率(relative survival)係相對於對照組(未經處理之細胞)的吸光度而計算以測定轉染以及組合治療之效果。The data is analyzed with MS excel software. The relative survival is calculated relative to the absorbance of the control group (untreated cells) to determine the effect of transfection and combination therapy.

以亂序型siRNA轉染導致很少或沒有自發性細胞死亡。自發性細胞死亡可歸因於個別細胞株對轉染試劑的敏感性。亂序型siRNA轉染需包括在各實驗中作為轉染對照組且建立基線(baseline)其反映可由於轉染反應而發生的細胞死亡數量。Transfection with disordered siRNA resulted in little or no spontaneous cell death. Spontaneous cell death can be attributed to the sensitivity of individual cell lines to transfection reagents. Disordered siRNA transfection needs to be included in each experiment as a transfection control group and establish a baseline that reflects the number of cell deaths that can occur due to the transfection reaction.

各數據集(data set)考慮到以亂序型siRNA轉染時所觀察的任何自發性細胞死亡;在各siRNA轉染反應中所觀察的細胞死亡數量減去來自亂序型siRNA轉染的自發性細胞死亡數量(基線),得到在考慮亂序型siRNA所誘導之細胞死亡之後的細胞死亡淨百分比(淨%)。Each data set takes into account any spontaneous cell death observed when transfected with scrambled siRNA; the number of cell deaths observed in each siRNA transfection reaction minus spontaneous transfection from scrambled siRNA The number of sex cell deaths (baseline) is the net cell death percentage (net%) after considering the cell death induced by the disordered siRNA.

在一實施態樣中,將5 nM多柔比星作為單一療法(monotherapy)添加至SU.86.86胰臟癌細胞中。而且,將細胞以MADD siRNA轉染,作為單一療法。在組合時,將5 nM多柔比星添加至以MADD siRNA轉染之細胞中。以未治療之對照組細胞、以亂序型siRNA轉染之對照組細胞、以MADD siRNA轉染之細胞、以5 nM多柔比星治療之細胞、及以MADD siRNA轉染與以5 nM多柔比星治療之細胞所代表的治療範例(treatment paradigm)之細胞培養物中的細胞死亡量,係在多柔比星治療後24小時評估。 表6. In one embodiment, 5 nM doxorubicin is added to SU.86.86 pancreatic cancer cells as a monotherapy. Furthermore, the cells were transfected with MADD siRNA as a monotherapy. In combination, 5 nM doxorubicin was added to cells transfected with MADD siRNA. Untreated control cells, control cells transfected with scrambled siRNA, cells transfected with MADD siRNA, cells treated with 5 nM doxorubicin, and more than 5 nM transfected with MADD siRNA The amount of cell death in the cell culture of the treatment paradigm represented by the cells treated with doxorubicin was evaluated 24 hours after doxorubicin treatment. Table 6.

如表6中所記述之結果證實MADD之siRNA減弱係導致0%之細胞死亡,以5 nM濃度之多柔比星單一療法導致36%之細胞死亡,以5 nM多柔比星添加至以MADD siRNA轉染之細胞導致52%之細胞死亡。所有的結果皆有考慮到利用亂序型siRNA細胞死亡數據之轉染效應。總之,結果證實MADD之siRNA減弱與多柔比星治療的組合之協同性(synergy),導致52%之細胞死亡,其遠超過以MADD siRNA減弱之單一療法或多柔比星單一療法之相加效果(additive effect),各單一療法的相加效果會是36%之細胞死亡。The results described in Table 6 confirmed that the weakening of siRNA of MADD resulted in 0% cell death. Monotherapy with 5 nM doxorubicin monotherapy resulted in 36% cell death. Add 5 nM doxorubicin to MADD siRNA transfected cells resulted in 52% cell death. All results take into account the effect of transfection using scrambled siRNA cell death data. In conclusion, the results confirmed that the synergy of the combination of siRNA reduction of MADD and doxorubicin treatment resulted in 52% cell death, which far exceeded the combination of MADD siRNA-reduced monotherapy or doxorubicin monotherapy Additive effect, the additive effect of each monotherapy will be 36% cell death.

在另一實施態樣中,將9.375 nM多柔比星作為單一療法添加至H2227肺癌細胞中。而且,將細胞以作為單一療法的MADD siRNA轉染。在組合時,將9.375 nM多柔比星添加至以MADD siRNA轉染之細胞中。以未治療之對照組細胞、以亂序型siRNA轉染之對照組細胞、以MADD siRNA轉染之細胞、以9.375 nM多柔比星治療之細胞、及以MADD siRNA轉染與以9.375 nM多柔比星治療之細胞所代表的治療範例之細胞培養物中的細胞死亡量,係在多柔比星治療後48小時評估。 表7. In another embodiment, 9.375 nM doxorubicin is added to H2227 lung cancer cells as a monotherapy. Furthermore, cells were transfected with MADD siRNA as monotherapy. In combination, 9.375 nM doxorubicin was added to cells transfected with MADD siRNA. Untreated control cells, scrambled siRNA transfected control cells, MADD siRNA transfected cells, 9.375 nM doxorubicin treated cells, and MADD siRNA transfected and more than 9.375 nM The amount of cell death in the cell culture of the treatment paradigm represented by the cells treated with doxorubicin was evaluated 48 hours after doxorubicin treatment. Table 7.

如表7中所記述之結果證實MADD之siRNA減弱導致7%之細胞死亡,以9.375 nM濃度之多柔比星單一療法導致3%之細胞死亡,以9.375 nM多柔比星添加至以MADD siRNA轉染之細胞導致38%之細胞死亡。所有的結果皆有考慮到利用亂序型siRNA細胞死亡數據之轉染效應。總之,結果證實MADD之siRNA減弱與多柔比星治療的組合之協同性,導致38%之細胞死亡,其遠超過以MADD siRNA減弱之單一療法或多柔比星單一療法之相加效果,各單一療法的相加效果會是10%之細胞死亡。The results described in Table 7 confirmed that MADD siRNA attenuation resulted in 7% cell death. Doxorubicin monotherapy at a concentration of 9.375 nM resulted in 3% cell death. Addition of 9.375 nM doxorubicin to MADD siRNA Transfected cells resulted in 38% cell death. All results take into account the effect of transfection using scrambled siRNA cell death data. In conclusion, the results confirm the synergy of the combination of MADD siRNA reduction and doxorubicin treatment, resulting in 38% cell death, which far exceeds the additive effect of MADD siRNA-reduced monotherapy or doxorubicin monotherapy, each The additive effect of monotherapy will be 10% cell death.

在一實施態樣中,將0.075 µM多柔比星作為單一療法添加至JIMT1乳癌細胞中。而且,將細胞以作為單一療法的MADD siRNA轉染。在組合時,將0.075 µM多柔比星添加至以MADD siRNA轉染之細胞中。以未治療之對照組細胞、以亂序型siRNA轉染之對照組細胞、以MADD siRNA轉染之細胞、以0.075 µM多柔比星治療之細胞、及以MADD siRNA轉染與以0.075 µM多柔比星治療之細胞所代表的治療範例之細胞培養物中的細胞死亡量,係在多柔比星治療後24小時評估。 表8. In one embodiment, 0.075 µM doxorubicin is added to JIMT1 breast cancer cells as a monotherapy. Furthermore, cells were transfected with MADD siRNA as monotherapy. In combination, 0.075 µM doxorubicin was added to cells transfected with MADD siRNA. Untreated control cells, scrambled siRNA control cells, MADD siRNA transfected cells, 0.075 µM doxorubicin-treated cells, and MADD siRNA transfected and more than 0.075 µM The amount of cell death in the cell culture of the treatment paradigm represented by the cells treated with doxorubicin was evaluated 24 hours after doxorubicin treatment. Table 8.

如表8中所記述之結果證實MADD之siRNA減弱係導致26%之細胞死亡,以0.075 µM濃度之多柔比星單一療法導致17%之細胞死亡,以0.075 µM多柔比星添加至以MADD siRNA轉染之細胞導致59%之細胞死亡。所有的結果皆有考慮到利用亂序型siRNA細胞死亡數據之轉染效應。總之,結果證實MADD之siRNA減弱與多柔比星治療的組合之協同性,導致59%之細胞死亡,其遠超過以MADD siRNA減弱之單一療法或多柔比星單一療法之相加效果,各單一療法的相加效果會是43%之細胞死亡。The results described in Table 8 confirmed that the weakening of siRNA of MADD caused 26% of cell death. Monotherapy with a concentration of 0.075 µM of doxorubicin resulted in 17% of cell death. Addition of 0.075 µM of doxorubicin to MADD siRNA transfected cells resulted in 59% cell death. All results take into account the effect of transfection using scrambled siRNA cell death data. In conclusion, the results confirm the synergy of the combination of MADD siRNA reduction and doxorubicin treatment, resulting in 59% of cell death, which far exceeds the additive effect of MADD siRNA-reduced monotherapy or doxorubicin monotherapy, each The additive effect of monotherapy will be 43% cell death.

在一實施態樣中,將0.8 µM多柔比星作為單一療法添加至N87胃癌細胞中。而且,將細胞以作為單一療法的MADD siRNA轉染。在組合時,將0.8 µM多柔比星添加至以MADD siRNA轉染之細胞中。以未治療之對照組細胞、以亂序型siRNA轉染之對照組細胞、以MADD siRNA轉染之細胞、以0.8 µM多柔比星治療之細胞、及以MADD siRNA轉染與以0.8 µM多柔比星治療之細胞所代表的治療範例之細胞培養物中的細胞死亡量,係在多柔比星治療後72小時評估。 表9. In one embodiment, 0.8 µM doxorubicin is added to N87 gastric cancer cells as a monotherapy. Furthermore, cells were transfected with MADD siRNA as monotherapy. When combining, add 0.8 µM doxorubicin to cells transfected with MADD siRNA. Untreated control cells, control cells transfected with scrambled siRNA, cells transfected with MADD siRNA, cells treated with 0.8 µM doxorubicin, and transfected with MADD siRNA and more than 0.8 µM The amount of cell death in the cell culture of the treatment paradigm represented by the cells treated with doxorubicin was evaluated 72 hours after doxorubicin treatment. Table 9.

如表9中所記述之結果證實MADD之siRNA減弱係導致7%之細胞死亡,以0.8 µM濃度之多柔比星單一療法導致38%之細胞死亡,以0.8 µM多柔比星添加至以MADD siRNA轉染之細胞導致56%之細胞死亡。所有的結果皆有考慮到利用亂序型siRNA細胞死亡數據之轉染效應。總之,結果證實MADD之siRNA減弱與多柔比星治療的組合之協同性,導致56%之細胞死亡,其遠超過以MADD siRNA減弱之單一療法或多柔比星單一療法之相加效果,各單一療法的相加效果會是45%之細胞死亡。The results described in Table 9 confirmed that the weakening of siRNA of MADD resulted in 7% cell death. Monotherapy at a concentration of 0.8 µM doxorubicin resulted in 38% cell death. Addition of 0.8 µM doxorubicin to MADD siRNA transfected cells resulted in 56% cell death. All results take into account the effect of transfection using scrambled siRNA cell death data. In conclusion, the results confirm the synergy of the combination of MADD siRNA reduction and doxorubicin treatment, resulting in 56% cell death, which far exceeds the additive effect of MADD siRNA-reduced monotherapy or doxorubicin monotherapy, each The additive effect of monotherapy will be 45% cell death.

在一實施態樣中,將0.25 µM多柔比星作為單一療法添加至K562慢性骨髓性白血病細胞中。而且,將細胞以作為單一療法的MADD siRNA轉染。在組合時,將0.25 µM多柔比星添加至以MADD siRNA轉染之細胞中。以未治療之對照組細胞、以亂序型siRNA轉染之對照組細胞、以MADD siRNA轉染之細胞、以0.25 µM多柔比星治療之細胞、及以MADD siRNA轉染與以0.25 µM多柔比星治療之細胞所代表的治療範例之細胞培養物中的細胞死亡量,係在多柔比星治療後72小時評估。 表10. In one embodiment, 0.25 µM doxorubicin is added to K562 chronic myelogenous leukemia cells as a monotherapy. Furthermore, cells were transfected with MADD siRNA as monotherapy. When combining, add 0.25 µM doxorubicin to cells transfected with MADD siRNA. Untreated control cells, control cells transfected with scrambled siRNA, cells transfected with MADD siRNA, cells treated with 0.25 µM doxorubicin, and more than 0.25 µM transfected with MADD siRNA The amount of cell death in the cell culture of the treatment paradigm represented by the cells treated with doxorubicin was evaluated 72 hours after doxorubicin treatment. Table 10.

如表10中所記述之結果證實MADD之siRNA減弱係導致47%之細胞死亡,以0.25 µM濃度之多柔比星單一療法導致11%之細胞死亡,以0.25 µM多柔比星添加至以MADD siRNA轉染之細胞導致76%之細胞死亡。所有的結果皆有考慮到利用亂序型siRNA細胞死亡數據之轉染效應。總之,結果證實MADD之siRNA減弱與多柔比星治療的組合之協同性,導致76%之細胞死亡,其遠超過以MADD siRNA減弱之單一療法或多柔比星單一療法之相加效果,各單一療法的相加效果會是58%之細胞死亡。The results described in Table 10 confirmed that the weakening of siRNA of MADD caused 47% of the cell death. Monotherapy at a concentration of 0.25 µM doxorubicin resulted in 11% of the cell death. The addition of 0.25 µM doxorubicin to MADD siRNA transfected cells resulted in 76% cell death. All results take into account the effect of transfection using scrambled siRNA cell death data. In conclusion, the results confirmed the synergy of the combination of MADD siRNA reduction and doxorubicin treatment, resulting in 76% cell death, which far exceeds the additive effect of MADD siRNA-reduced monotherapy or doxorubicin monotherapy, each The additive effect of monotherapy will be 58% cell death.

在一實施態樣中,將0.5 µM多柔比星作為單一療法添加至K562慢性骨髓性白血病細胞中。而且,將細胞以作為單一療法的MADD siRNA轉染。在組合時,將0.5 µM多柔比星添加至以MADD siRNA轉染之細胞中。以未治療之對照組細胞、以亂序型siRNA轉染之對照組細胞、以MADD siRNA轉染之細胞、以0.5 µM多柔比星治療之細胞、及以MADD siRNA轉染與以0.5 µM多柔比星治療之細胞所代表的治療範例之細胞培養物中的細胞死亡量,係在多柔比星治療後48小時評估。 表11. In one embodiment, 0.5 µM doxorubicin is added to K562 chronic myeloid leukemia cells as a monotherapy. Furthermore, cells were transfected with MADD siRNA as monotherapy. When combining, add 0.5 µM doxorubicin to cells transfected with MADD siRNA. Untreated control cells, control cells transfected with scrambled siRNA, cells transfected with MADD siRNA, cells treated with 0.5 µM doxorubicin, and transfected with MADD siRNA and more than 0.5 µM The amount of cell death in the cell culture of the treatment paradigm represented by the cells treated with doxorubicin was evaluated 48 hours after doxorubicin treatment. Table 11.

如表11中所記述之結果證實MADD之siRNA減弱係導致4%之細胞死亡,以0.5 µM濃度之多柔比星單一療法導致0%之細胞死亡,以0.5 µM多柔比星添加至以MADD siRNA轉染之細胞導致23%之細胞死亡。所有的結果皆有考慮到利用亂序型siRNA細胞死亡數據之轉染效應。總之,結果證實MADD之siRNA減弱與多柔比星治療的組合之協同性,導致23%之細胞死亡,其遠超過以MADD siRNA減弱之單一療法或多柔比星單一療法之相加效果,各單一療法的相加效果會是4%之細胞死亡。The results described in Table 11 confirmed that the weakening of siRNA of MADD caused 4% of cell death. Doxorubicin monotherapy at a concentration of 0.5 µM resulted in 0% of cell death. Addition of 0.5 µM doxorubicin to MADD siRNA transfected cells resulted in 23% cell death. All results take into account the effect of transfection using scrambled siRNA cell death data. In conclusion, the results confirm the synergy of the combination of MADD siRNA reduction and doxorubicin treatment, resulting in 23% cell death, which far exceeds the additive effect of MADD siRNA attenuated monotherapy or doxorubicin monotherapy, each The additive effect of monotherapy will be 4% cell death.

考慮前述的實驗結果,本檢定法證實蒽環化學療劑治療與MADD減弱的組合在引發癌細胞死亡上獲致意外的協同效果。結果證實蒽環化學療法與MADD減弱的組合在細胞死亡上獲致超過相加效果。結果,蒽環化學療劑之劑量可降低至先前認為不具治療性的水平,從而提供展現出乎意料的安全性限度及降低的不想要的副作用之癌症療法。Considering the aforementioned experimental results, this assay confirms that the combination of anthracycline chemotherapeutic agent treatment and MADD reduction has an unexpected synergistic effect on cancer cell death. The results confirmed that the combination of anthracycline chemotherapy and attenuated MADD resulted in more than additive effects on cell death. As a result, the dose of anthracycline chemotherapeutic agents can be reduced to levels previously thought to be non-therapeutic, thereby providing cancer therapies that exhibit unexpected safety limits and reduced undesirable side effects.

本發明不受限於本文所述之具體實施態樣的範圍。事實上,除了那些本文所述者以外,那些熟習本技術領域者可從前文的說明清楚本發明之各種修飾。此等修飾意欲落在所附之申請專利範圍的範疇內。The invention is not limited to the scope of the specific embodiments described herein. In fact, in addition to those described herein, those skilled in the art can clearly understand the various modifications of the present invention from the foregoing description. Such modifications are intended to fall within the scope of the attached patent application.

本文引用的所有專利、申請案、出版物、試驗方法、文獻及其他材料係藉引用方式併入本文。All patents, applications, publications, test methods, literature and other materials cited herein are incorporated by reference.

1 . 藉由選擇性mRNA剪接(alternative mRNA splicing)所產生的人類IG20剪接變異體。顯示在七種IG20剪接變異體之間的cDNA序列同源性(sequence homology)。實心長條代表在所有變異體之間完全同源(complete homology)的區域。空的區域表示外顯子13L、16、21、26和34,其在以不同的組合剪接時,得到如左側所示的七種剪接變異體。在KIAA0358及IG20-SV4中,外顯子34之剪接導致在外顯子35提早終止密碼子(early stopcodon)。亦顯示不同的剪接變異體之不同的5’非轉譯區(untranslated region)(UTR)。 Figure 1. Splice variants of human IG20 produced by alternative mRNA splicing. CDNA sequence homology among seven IG20 splice variants is shown. The solid bars represent areas of complete homology among all variants. The empty regions represent exons 13L, 16, 21, 26, and 34, which, when spliced in different combinations, resulted in seven splice variants as shown on the left. In KIAA0358 and IG20-SV4, the splicing of exon 34 leads to an early stop codon in exon 35. It also shows the different 5 'untranslated regions (UTR) of different splice variants.

Claims (35)

一種有用於治療癌症的抗腫瘤劑之組合,其包含有效量的一或多種能夠調降IG20 基因之至少一種剪接變異體(splice variant)的表現之核酸分子,其中並非IG20 基因之所有的剪接變異體皆調降;以及一或多種蒽環化學療劑。A combination of antitumor agents useful for the treatment of cancer, comprising an effective amount of one or more nucleic acid molecules capable of down- regulating the performance of at least one splice variant of the IG20 gene, not all of which are splicing variants of the IG20 gene The body is down regulated; and one or more anthracycline chemotherapeutics. 根據申請專利範圍第1項之組合,其中,IG20 基因之至少一種剪接變異體係選自MADD剪接變異體、SNP、其對偶基因變異(allelic variation)、其多型性(polymorphism)及其基因突變。According to the combination of item 1 of the patent application scope, wherein at least one splice variant system of the IG20 gene is selected from MADD splice variants, SNPs, allelic variations, polymorphisms, and gene mutations thereof. 根據申請專利範圍第2項之組合,其中,IG20 基因之至少一種剪接變異體為展現外顯子13L之MADD剪接變異體。According to the combination of item 2 of the patent application scope, wherein at least one splice variant of the IG20 gene is a MADD splice variant exhibiting exon 13L. 根據申請專利範圍第2項之組合,其中,一或多種能夠調降IG20 基因之至少一種剪接變異體的表現之核酸分子係選自siRNA、shRNA及反義寡核苷酸(antisense oligonucleotide)。According to the combination of claim 2 of the patent application scope, wherein one or more nucleic acid molecules capable of down- regulating the performance of at least one splice variant of the IG20 gene are selected from siRNA, shRNA and antisense oligonucleotide. 根據申請專利範圍第4項之組合,其中,siRNA、shRNA及反義寡核苷酸係包含與MADD剪接變異體、SNP、其對偶基因變異、其多型性及其基因突變的外顯子13L之核酸序列及/或其mRNA轉錄本互補的核酸。According to the combination of item 4 of the patent application scope, siRNA, shRNA and antisense oligonucleotides include exon 13L with MADD splice variant, SNP, its dual gene variant, its polymorphism and its gene mutation Nucleic acid sequence complementary to the nucleic acid sequence and / or its mRNA transcript. 根據申請專利範圍第4項之組合,其中,能夠調降IG20 基因之至少一種剪接變異體的表現之核酸分子係包含在siRNA或shRNA中。The combination according to item 4 of the patent application scope, wherein the nucleic acid molecule capable of down- regulating the expression of at least one splice variant of the IG20 gene is contained in siRNA or shRNA. 根據申請專利範圍第6項之組合,其中,siRNA及shRNA係由包括下列結構之核酸分子編碼:   X正義 - 髮夾環圈 - X反義 ,   其中,X包括或基本上由核酸序列CGGCGAATCTATG ACAATC(SEQ ID NO:1)所組成。According to the combination of item 6 of the patent application scope, wherein siRNA and shRNA are encoded by a nucleic acid molecule including the following structure: X sense -hairpin loop-X antisense , wherein X includes or consists essentially of the nucleic acid sequence CGCGCAGATATCTATG SEQ ID NO: 1). 根據申請專利範圍第6項之組合,其中,siRNA或shRNA包含具有序列CGGCGAAUCUAUGACAAUC(SEQ ID NO:2)之核酸。The combination according to item 6 of the patent application scope, wherein the siRNA or shRNA comprises a nucleic acid having the sequence CGGCGAAUCUAUGACAAUC (SEQ ID NO: 2). 根據申請專利範圍第6項之組合,其中,siRNA或shRNA包含具有序列CGGCGAAUCUAUGACAAUC(SEQ ID NO:2)之核酸,且係與具有序列GAUUGUCAUAGAUUCGC CG(SEQ ID NO:10)之同源核酸(cognate nucleic acid)呈雙鏈(duplex)形式。According to the combination of claim 6, the siRNA or shRNA contains a nucleic acid having the sequence CGGCGAAUCUAUGACAAUC (SEQ ID NO: 2), and is a homologous nucleic acid (cognate nucleic acid) having the sequence GAUUGUCAUAGAUUCGC CG (SEQ ID NO: 10) acid) is in the form of duplex. 根據申請專利範圍第7項之組合,其中,shRNA及siRNA係由具有序列CGAATCTATGACAATCTTCAAGAGA GATTGTCATAGATTCGCCG(SEQ ID NO:3)之核酸編碼,其中,髮夾環圈區係自序列的位置20至28。According to the combination of item 7 of the patent application scope, the shRNA and siRNA are encoded by a nucleic acid having the sequence CGAATCTATGACAATCTTCAAGAGA GATTGTCATAGATTCGCCG (SEQ ID NO: 3), wherein the hairpin loop region is from positions 20 to 28 of the sequence. 根據申請專利範圍第4項之組合,其中,包含與該IG20 基因之MADD剪接變異體的外顯子13L之核酸序列及/或其mRNA轉錄本互補的核酸之siRNA、shRNA及反義寡核苷酸係包含具有選自GAUUGUCAUAGAUUCGCCGTT (SEQ ID NO:4)及GAUUGUCAUAGAUUCGCCG(SEQ ID NO:10)之序列的核酸。The combination according to item 4 of the patent application scope, which includes siRNA, shRNA and antisense oligonucleosides of nucleic acids complementary to the nucleic acid sequence of exon 13L of the MADD splice variant of the IG20 gene and / or its mRNA transcript The acid system comprises a nucleic acid having a sequence selected from GAUUGUCAUAGAUUCGCCGTT (SEQ ID NO: 4) and GAUUGUCAUAGAUUCGCCG (SEQ ID NO: 10). 根據申請專利範圍第4項之組合,其中,該一或多種能夠調降IG20 基因之至少一種剪接變異體的表現之核酸分子係包含在藥物遞輸系統中。The combination according to item 4 of the patent application scope, wherein the one or more nucleic acid molecules capable of down- regulating the performance of at least one splice variant of the IG20 gene are included in the drug delivery system. 根據申請專利範圍第12項之組合,其中,該藥物遞輸系統為靶定型脂質體調配物(targeted liposome formulation)或慢病毒載體(lentivirus vector)。The combination according to item 12 of the patent application scope, wherein the drug delivery system is a targeted liposome formulation or a lentivirus vector. 根據申請專利範圍第1項之組合,其中,該一或多種蒽環化學療劑係選自道諾黴素(daunorubicin)、多柔比星(doxorubicin)、泛艾黴素(epirubicin)、艾達黴素 (idarubicin)和戊柔比星(valrubicin)。The combination according to item 1 of the patent application scope, wherein the one or more anthracycline chemotherapeutics are selected from daunorubicin, doxorubicin, epirubicin, and ada Idarubicin and valrubicin. 根據申請專利範圍第1項之組合,其中,該一或多種蒽環化學療劑係呈醫藥上可接受之鹽形式。The combination according to item 1 of the patent application scope, wherein the one or more anthracycline chemotherapeutic agents are in the form of pharmaceutically acceptable salts. 根據申請專利範圍第1項之組合,其中,該癌症係選自白血病、淋巴瘤、乳癌、胃癌、子宮癌、卵巢癌、膀胱癌和肺癌及其他種類的實質固態瘤癌症(solid tumor cancer),以及卡波西氏肉瘤(Kaposi’s sarcoma)。The combination according to item 1 of the patent application scope, wherein the cancer is selected from leukemia, lymphoma, breast cancer, gastric cancer, uterine cancer, ovarian cancer, bladder cancer, lung cancer and other types of solid tumor cancer, And Kaposi's sarcoma. 一種抗腫瘤劑及一或多種蒽環化學療劑之組合的用途,其係用於製備治療有需要之個體的選自下列之癌症的藥劑:白血病、淋巴瘤、乳癌、胃癌、子宮癌、胰臟癌、卵巢癌、子宮頸癌、前列腺癌、黑色素瘤、食道癌、膀胱癌、肝癌、甲狀腺瘤和肺癌及其他種類的實質固態瘤癌症,以及卡波西氏肉瘤,其中,該抗腫瘤劑包含一或多種能夠調降IG20 基因之至少一種剪接變異體的表現之核酸分子,且其中並非IG20 基因之所有的剪接變異體皆調降。Use of a combination of an anti-tumor agent and one or more anthracycline chemotherapeutic agents for the preparation of a medicament for the treatment of an individual in need of cancer selected from the group consisting of leukemia, lymphoma, breast cancer, gastric cancer, uterine cancer, and pancreas Dental cancer, ovarian cancer, cervical cancer, prostate cancer, melanoma, esophageal cancer, bladder cancer, liver cancer, thyroid and lung cancer and other types of solid solid tumor cancer, and Kaposi's sarcoma, in which the anti-tumor agent It includes one or more nucleic acid molecules capable of down- regulating the performance of at least one splice variant of the IG20 gene, and not all splice variants of the IG20 gene are down-regulated. 根據申請專利範圍第17項之用途,其中,癌症係展現IG20 基因之至少一種剪接變異體的表現。According to the use of claim 17 in the patent application scope, wherein the cancer exhibits the performance of at least one splice variant of the IG20 gene. 根據申請專利範圍第17項之用途,其中,癌症係展現IG20 基因之MADD剪接變異體、SNP、其對偶基因變異、其多型性及其基因突變的表現。According to the use of item 17 of the patent application scope, the cancer line exhibits the MADD splice variant of the IG20 gene, SNP, its dual gene variant, its polymorphism, and its gene mutation. 根據申請專利範圍第19項之用途,其中,MADD剪接變異體展現IG20 基因之外顯子13L。According to the use of item 19 in the patent application range, the MADD splice variant exhibits exon 13L of the IG20 gene. 根據申請專利範圍第17項之用途,其中,該一或多種能夠調降IG20 基因之至少一種剪接變異體的表現之核酸分子係選自siRNA、shRNA及反義寡核苷酸。The use according to item 17 of the patent application scope, wherein the one or more nucleic acid molecules capable of down- regulating the performance of at least one splice variant of the IG20 gene are selected from siRNA, shRNA, and antisense oligonucleotides. 根據申請專利範圍第21項之用途,其中,siRNA、shRNA及反義寡核苷酸係包含與IG20 基因之MADD剪接變異體、SNP、其對偶基因變異、其多型性及其基因突變的外顯子13L之核酸序列及/或其mRNA轉錄本互補的核酸。According to the use of item 21 of the patent application scope, siRNA, shRNA and antisense oligonucleotides include MADD splice variants with the IG20 gene, SNPs, their dual gene variants, their polymorphisms and their gene mutations. The nucleic acid sequence of the exon 13L and / or its mRNA transcript is complementary. 根據申請專利範圍第22項之用途,其中,能夠調降IG20 基因之至少一種剪接變異體的表現之核酸分子係包含在siRNA或shRNA中。The use according to item 22 of the patent application scope, wherein the nucleic acid molecule capable of down- regulating the expression of at least one splice variant of the IG20 gene is contained in siRNA or shRNA. 根據申請專利範圍第23項之用途,其中,siRNA及shRNA係由包括下列結構之核酸分子編碼:   X正義 - 髮夾環圈 - X反義 ,   其中,X包括或基本上由核酸序列CGGCGAATCTATG ACAATC(SEQ ID NO:1)所組成。According to the use of item 23 of the patent application scope, siRNA and shRNA are encoded by a nucleic acid molecule including the following structure: X sense -hairpin loop-X antisense , wherein X includes or consists essentially of the nucleic acid sequence CGGCGAATCTATG ACAATC ( SEQ ID NO: 1). 根據申請專利範圍第23項之用途,其中,siRNA及shRNA包含具有序列CGGCGAAUCUAUGACAAUC(SEQ ID NO:2)之核酸。According to the use in item 23 of the patent application range, the siRNA and shRNA include a nucleic acid having the sequence CGGCGAAUCUAUGACAAUC (SEQ ID NO: 2). 根據申請專利範圍第25項之用途,其中,siRNA及shRNA包含具有序列CGGCGAAUCUAUGACAAUC(SEQ ID NO:2)之核酸,且係與具有序列GAUUGUCAUAGAUUCGC CG(SEQ ID NO:10)之同源核酸呈雙鏈形式。The use according to item 25 of the patent application scope, wherein the siRNA and shRNA comprise a nucleic acid having the sequence CGGCGAAUCUAUGACAAUC (SEQ ID NO: 2) and are double-stranded with a homologous nucleic acid having the sequence GAUUGUCAUAGAUUCGC CG (SEQ ID NO: 10) form. 根據申請專利範圍第22項之用途,其中,shRNA係由具有序列CGAATCTATGACAATCTTCAAGAGAGATTGTCA TAGATTCGCCG(SEQ ID NO:3)之核酸編碼,其中,髮夾環圈區係自序列的位置20至28。According to the use of item 22 of the patent application scope, wherein the shRNA is encoded by a nucleic acid having the sequence CGAATCTATGACAATCTTCAAGAGAGATTGTCA TAGATTCGCCG (SEQ ID NO: 3), wherein the hairpin loop region is from positions 20 to 28 of the sequence. 根據申請專利範圍第22項之用途,其中,包含與該IG20 基因之MADD剪接變異體的外顯子13L之核酸序列及/或其mRNA轉錄本互補的核酸之siRNA、shRNA及反義寡核苷酸係包含具有選自GAUUGUCAUAGAUUCGCCGTT (SEQ ID NO:4)及GAUUGUCAUAGAUUCGCCG(SEQ ID NO:10)之序列的核酸。Use according to item 22 of the patent application scope, which includes siRNA, shRNA and antisense oligonucleosides of nucleic acids complementary to the nucleic acid sequence of exon 13L of the MADD splice variant of the IG20 gene and / or its mRNA transcript The acid system comprises a nucleic acid having a sequence selected from GAUUGUCAUAGAUUCGCCGTT (SEQ ID NO: 4) and GAUUGUCAUAGAUUCGCCG (SEQ ID NO: 10). 根據申請專利範圍第22項之用途,其中,一或多種siRNA、shRNA及反義寡核苷酸係以脂質體調配物形式或藉由慢病毒轉染(lentivirus transfection)而投予。The use according to item 22 of the patent application scope, wherein one or more siRNAs, shRNAs and antisense oligonucleotides are administered in the form of liposome formulations or by lentivirus transfection. 根據申請專利範圍第22項之用途,其中,一或多種siRNA、shRNA及反義寡核苷酸係作為佐劑(adjuvant)投予。According to the use of item 22 in the patent application scope, one or more of siRNA, shRNA and antisense oligonucleotides are administered as an adjuvant. 根據申請專利範圍第17項之用途,其中,該一或多種蒽環化學療劑係選自道諾黴素、多柔比星、泛艾黴素、艾達黴素和戊柔比星。The use according to item 17 of the patent application scope, wherein the one or more anthracycline chemotherapeutic agents are selected from the group consisting of daunorubicin, doxorubicin, pangamycin, idamycin and pentorubicin. 根據申請專利範圍第17項之用途,其中,該一或多種蒽環化學療劑係以進一步包含一或多種醫藥上可接受之稀釋劑、賦形劑或載劑之醫藥組成物的形式投予。The use according to item 17 of the patent application scope, wherein the one or more anthracycline chemotherapeutic agents are administered in the form of a pharmaceutical composition further comprising one or more pharmaceutically acceptable diluents, excipients or carriers . 根據申請專利範圍第22項之用途,其中,一或多種siRNA、shRNA及反義寡核苷酸係在一或多種蒽環化學療劑之前投予,或係與一或多種蒽環化學療劑同時投予。The use according to item 22 of the patent application scope, in which one or more siRNAs, shRNAs and antisense oligonucleotides are administered before one or more anthracycline chemotherapeutics or in combination with one or more anthracycline chemotherapeutics Give at the same time. 根據申請專利範圍第22項之用途,其中,一或多種siRNA、shRNA及反義寡核苷酸係以進一步包含一或多種醫藥上可接受之稀釋劑、賦形劑或載劑之醫藥組成物的形式投予。The use according to item 22 of the patent application scope, wherein one or more siRNAs, shRNAs and antisense oligonucleotides are pharmaceutical compositions further comprising one or more pharmaceutically acceptable diluents, excipients or carriers In the form of giving. 根據申請專利範圍第22項之用途,其中,一或多種siRNA、shRNA及反義寡核苷酸以及一或多種蒽環化學療劑係調配在劑量包裝(dosage pack)中且根據所選擇的治療方案投予。Use according to item 22 of the patent application scope, in which one or more siRNA, shRNA and antisense oligonucleotides and one or more anthracycline chemotherapeutic agents are formulated in a dosage pack and according to the selected treatment Projects are given.
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