TW200540273A - Canine distemper virus isolated in korea and recombinant vaccine using the same - Google Patents
Canine distemper virus isolated in korea and recombinant vaccine using the same Download PDFInfo
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200540273 九、發明說明: * 【發明所屬之技術領域和先前技術】 本發明涉及在韓國發現的新穎韓國犬瘦熱病毒和使用 該病毒的用於犬瘟熱的重組疫苗。 犬盘熱是在犬類中具有非常高傳染性的、具有代表性 的急性發熱疾病’其不分地區和季節而出,見。該疾病是引 起高死亡率的病毒性疾病,其在幼犬(卿py)中發展成 急性或亞急性狀態,並通過胃腸系統m統、上皮系 籲統或中樞神經系統而出現,從而導致被感染的免疫力低下 的幼犬或老犬死亡。 犬瘟熱的特徵性臨床症狀是全身粘膜中的急性炎症和 非化膿性腦炎,這些病症在免疫力低下的犬中形成,例如 小於1歲(尤其是3-6個月)的幼犬或老犬。犬瘟熱是由 於屬於副粘病毒()科的犬瘟熱病毒(下文 中簡稱爲‘‘ CDV” )經口或呼吸道的感染而出現的。.從病 毒進入犬身體之時開始直至臨床病徵出現具有3·6天(平 _均4天)的潛伏期,單獨的病毒感染形成弱的臨床症狀。 可是,在CDV感染之後,這些症狀常常由於繼發性細菌 感染而加重,這些繼發性細菌感染包括支氣管敗血性包特 氏囷 (Bordetella 心㈣) 或釀膿鏈球菌 (々㈣口/少❿以)引起的呼吸系統感染和沙門 氏菌()或大腸桿菌(凡e〇/z·)引起的胃腸感染。 CD V最通常是通過來自感染了 CDV的犬的小滴分泌物直 接傳播的,也是由於通過被從鼻或眼排出物和尿液中分泌 5 200540273 出的CDV污染的飼養環境 滴分泌物的CDV傳播感染 最後感染全身的免疫系統或 個體變得具有低下的免疫力 並在最壞的情況下死亡。 的間接感染而傳播的。通過小 上呼吸系統,進入血液流,並 器官。大多數感染了 CDV的 ’因此易患繼發性細菌感染,200540273 IX. Description of the invention: * [Technical field to which the invention belongs and prior art] The present invention relates to a novel Korean canine lean fever virus found in South Korea and a recombinant vaccine for canine distemper using the virus. Canine fever is a highly contagious and representative acute fever disease in dogs, and it can be seen regardless of region or season. This disease is a viral disease that causes high mortality. It develops into an acute or subacute state in puppies (Qing py) and appears through the gastrointestinal system, the epithelium, or the central nervous system, leading to being Infected young or old dogs with weakened immunity die. The clinical symptoms characteristic of canine distemper are acute inflammation and non-purulent encephalitis in the systemic mucosa, which develop in immunocompromised dogs, such as puppies less than 1 year old (especially 3-6 months) or Old dog. Canine distemper occurs due to oral or respiratory infections of canine distemper virus (hereinafter referred to as "CDV") belonging to the Paramyxovirus () family. It begins when the virus enters the dog's body and continues to show clinical signs With an incubation period of 3.6 days (average 4 days on average), individual viral infections form weak clinical symptoms. However, after CDV infection, these symptoms are often exacerbated by secondary bacterial infections, which are secondary bacterial infections Includes respiratory infections caused by bronchial sepsis (Bordetella palpitations) or Streptococcus pyogenes (stomach / lean), and gastrointestinal infections caused by Salmonella () or E. coli Infection. CD V is most commonly transmitted directly through droplet secretions from dogs infected with CDV, but also due to drip secretions contaminated from the feeding environment contaminated by CDV from nasal or eye excretion and urine. 5 200540273 CDV-transmitted infections eventually infect the entire body's immune system or individuals become impaired and die in the worst cases. Indirect infections are transmitted. Through the small upper respiratory system Into the blood stream and organs. Most of CDV infection 'and therefore susceptible to secondary bacterial infection,
斗:.CDV疋有包膜的RNA病毒,它們在外包膜上表現兩 ㈣於其致病性和免疫原性起作用的蛋白質。特別地,已 α在參與最初的病毒侵人宿主細胞過程的“血凝素(Η ) ^ 中卷現了最尚的抗原變異,該蛋白質廣泛用作檢測 =病毒的基因改變的主要標記。因此,在全世界的國家中, :通過逆轉錄聚合酶鏈反應(下文中簡稱爲“RT-PCR”) 増幅編碼在每個國家中傳播的CDV的Η蛋㈣血凝素(Η) 基因,並通過限制性片段長度多態性(下文中簡稱爲 RFLP”)測定法(在其中用限制性内切酶消& =經作了許多努力來預防具有高傳㈣的犬錄,並 因此獲得了來自獸醫臨床領域的世界性關注。最初的嘗試 在觸 主年代之後在美國、歐洲國家和別處進行,以開發 ^用病毒的滅活(inaetivated)疫苗,該病毒在源自倉鼠肺細 i的培養細胞中繁殖。近來,在包括韓國在㈣許多國家 中已經使用組織培養開發出減毒活疫苗,因此實現了對於 犬盘熱的有效預防。可是’許多近期的研究報導了:在1 99〇 :代之後,在最鄰近的國家曰本中,“顯示出犬瘦熱臨 木病徵的犬中的CDV分離株之令存在新的突變體,其具 有不同於世界性普遍存在的CDV株系的分子生物學特性。Dou: .CDVs are enveloped RNA viruses that exhibit proteins on the outer envelope that play a role in their pathogenicity and immunogenicity. In particular, alpha has revealed the most antigenic variants in "hemagglutinin (Η) ^, which was involved in the initial viral invasion of host cells, and this protein is widely used as a primary marker for detecting genetic changes in the virus. Therefore In countries around the world: through reverse transcription polymerase chain reaction (hereinafter simply referred to as "RT-PCR"), a gene encoding the hemagglutinin (Η) gene of CDV transmitted in each country, and Restriction fragment length polymorphism (hereafter referred to as RFLP ") assay (in which restriction enzyme digestion is used & = many efforts have been made to prevent dogs with high transmission rates, and thus obtained A worldwide concern from the veterinary clinical field. Initial attempts were made in the United States, European countries, and elsewhere after the contact era to develop inaetivated vaccines using a virus derived from the culture of hamster lung cells. Cells multiply. Recently, live attenuated vaccines have been developed using tissue culture in many countries including South Korea, thus achieving effective prevention of canine disc fever. However, 'many recent reports : After 1 990: generation, in the nearest neighboring country, "there is a new mutant of the CDV isolate in dogs showing signs of canine lean fever syndrome, which has a different world Molecular biological characteristics of the CDV strains present.
6 200540273 CDV分離株的η ,發現了許多不同 產物並在瓊脂糖凝膠上進行分離以比較 基因之間的RFLP圖式)來進行分析時 於目前的CDV疫苗的野生CDV株系。6 200540273 η of CDV isolates, many different products were found and separated on an agarose gel to compare RFLP patterns between genes) for analysis of the current CDV vaccine wild CDV strains.
近來在日本進行的Η基因胺基酸序列的系統發生分 析揭示出,至少兩種CDVH基因基因型在包括日本在内的 亞洲地區的犬類中傳播;—種是以前在日本傳播的幾乎所 有日本CDV分離株均屬於其的基因$,另一種以前在日 本沒有描述。這兩種CDV H基因基因型包含這樣的Η基 因,即其具有不同於目前可獲得的疫苗株系和在美國、歐 洲國家和別處流行的CDV株系的其他譜系或基因型的胺 基酸序列。 在韓國,儘官犬類已經用在美國或歐洲國家生産的 DV疫备進行了免疫接種,它們還是會逐漸增多地再次感 染CDV。基於這一現象,認爲經遺傳修飾的cdv特別在 韓國是存在的。可是,沒有準確的證據表明存在韓國CDv。 在這一點上,本發明人想要找到還未報導過的新穎韓國 CDV株系。 【發明内容】 技術問顥 因此,本發明旨在提供在韓國引起犬瘟熱的新穎韓國 CDV ’和使用該病毒的用於犬瘟熱的重組疫苗。 【實施方式】 本發明的構律 本發明的病毒是引起犬瘟熱的CD V,其特徵在於其是 7 200540273 特別在韓國發現的新穎韓國CDV株系。 如上所述,基於編碼CDV的Η蛋白的Η基因之間的 系統發生差異,已經發現了多種變異。一個近來的日本報 導描述了對於在亞洲發現的CDV的系統發生分組(Μ.A recent phylogenetic analysis of the amino acid sequence of the plutonium gene in Japan revealed that at least two CDVH genotypes have been transmitted in dogs in Asian regions including Japan;-a species that is transmitted in almost all Japan CDV isolates all belong to its gene $, and another was not previously described in Japan. These two CDV H genotypes contain a plutonium gene that has amino acid sequences that differ from currently available vaccine strains and other lineages or genotypes of CDV strains that are prevalent in the United States, European countries, and elsewhere . In South Korea, good dogs have been immunized with DV vaccines produced in the United States or European countries, and they will gradually re-infect CDV. Based on this phenomenon, it is thought that genetically modified cdv exists especially in Korea. However, there is no precise evidence that a Korean CDv exists. In this regard, the inventors wanted to find a novel Korean CDV strain that has not been reported. SUMMARY OF THE INVENTION Therefore, the present invention aims to provide a novel Korean CDV that causes canine distemper in Korea and a recombinant vaccine for canine distemper using the virus. [Embodiment] The constitution of the present invention The virus of the present invention is a CD V that causes canine distemper, which is characterized in that it is a novel Korean CDV strain that was found especially in South Korea. As described above, phylogenetic differences based on the prion genes encoding prion proteins of CDV have been found, and a variety of variations have been found. A recent Japanese report describes the grouping (M.
Hashimoto 等人,Archives of Virology,2001, 146:149-155)。在該報導中,RFLp分析顯示,將具有與常規CDVHashimoto et al., Archives of Virology, 2001, 146: 149-155). In the report, RFLp analysis revealed that
疫苗Onderstepoort的η基因不同的RFLP圖式的KDK-1 株系分類爲亞洲/Η 1基因型。此外,從來自感染了 CDV的 個體的直腸和口部拭子試樣獲得的98-002等Η基因顯示 出與亞洲/Η1基因型不同的RFLp分佈圖,其中將拭子試 樣中的CDV分離株分類爲亞洲/H2基因型。 可疋’分類爲亞洲/H2基因型的98-002等不是指分離 的病毒,而是指從感染了 CDV的個體的直腸和口部拭子 試樣取得的Η基因本身,也就是說,上面的報導表明了存 在亞洲/Η2基因型的CDV的可能性,但是這樣的病毒實質 上還沒有分離得到(Μ· Mochizuki等人,J〇urnal 〇f c丨inicaiKDK-1 strains with different RFLP patterns of the η gene of the vaccine Onderstepoort were classified as Asian / Η1 genotype. In addition, 98-002 isoenzymes obtained from rectal and oral swab samples from individuals infected with CDV showed an RFLp profile different from the Asian / Η1 genotype in which CDV was isolated from swab samples The strain was classified as Asian / H2 genotype. Can be classified as Asian / H2 genotype 98-002, etc. does not refer to isolated viruses, but refers to the plutonium gene itself obtained from rectal and oral swab samples from individuals infected with CDV, that is, the above The report indicates the possibility of CDV of the Asian / Η2 genotype, but such a virus has not been substantially isolated (M. Mochizuki et al., Journal 〇fc 丨 inicai
Microbiology, 1999, 37:2936-2942 )。 圖2顯示了本發明病毒(泳道4_9)、邮罐( (冰道1) 、KDK-1 (泳道2)和98_0〇2 (泳道3)的每個 Η基因中的一部分的RFLp分析結果,其中η因在相同 =件下用RT-PCR進行增幅。發現本發明的病毒具有與分 #爲亞洲/H1基因型的常規CDV癌μ ^』 夂田 Onderstepoort 和 株系不同的η基因基因型 b 仁疋該Η基因基因型 人刀頭爲亞洲/Η2基因型的98德類似。此外,如圖3中 8 200540273 f示,發現本發明❾CDV株系爲屬於新基因型的病毒, =土口 3L在系統發生上不同於常規❸⑶V疫苗株系气 目前在曰本已知的CDV株系。98·〇〇2是從犬的直腸和口 部拭子試樣取得的Η基因,其可以作爲確定—種CM是 否〆、有亞洲/H2基因型的標準,但是不能直接影響個體病 毒的分離和鑑定,因爲其不是病毒。 基於& 一發現’將根據本發明分離和鑑定的且含有 I'NO. i所示η基因的病毒命名爲“漢城%病毒,,,其 保藏於在2003年2月25日加人韓國培養物收集聯盟的韓 國微生物保藏中心(KCCM),並具有編號KCCMHM67。 另外,本發明提供了用於犬瘟熱的重組疫苗,其使用 本發明的犬瘟熱病毒的整體或一部分,並含有醫藥上可接 受的添加劑。醫藥上可接受的添加劑可選自本領域熟習此 項技術者在本領域中通常使用的添加劑。 用於犬瘟熱的重組疫苗可以使用本發明的犬瘟熱病毒 以任何本領域中已知的方法進行製備。較佳土也,重組疫苗 用犬瘦熱病毒的SEQ ID N〇. i所示Η基因的整體或一部 分進行製備。 通過下面的實施例可以更好地理解本發明,列出這些 貫施例是烏了舉例說明本發明,而不能將其解釋爲對本發 明的限制。 實施例1 :犬瘟熱病毒的分離 (步驟1 )試樣製備 於1 998年9月,通過在韓國漢城的一所動物醫院遞交 9 200540273 1個月大的北京哈巴狗幼犬的屍體和血液試樣,該幼犬的 CDV免疫史未知,但診斷爲患有犬瘟熱。 (步驟2 ) CDV感染的評價 用下列檢查CDV感染,即取自幼犬的器官的上清液, 在用分離的CDV致敏之後形成致細胞病變效應(CPE )的 敏感細胞的上清液,和選殖進質體的Onderstepoort Η基因 DNA。 CDV RNA的分雛Microbiology, 1999, 37: 2936-2942). FIG. 2 shows the results of RFLp analysis of a part of each gene of the virus of the present invention (lanes 4-9), mail tank ((ice lane 1), KDK-1 (lane 2), and 98_002 (lane 3), where η was amplified by RT-PCR under the same conditions. The virus of the present invention was found to have a η genotype b that is different from the conventional CDV cancer with the Asian / H1 genotype.人 The human genotype of this genotype genotype is similar to that of Asian / Η2 genotype 98. In addition, as shown in Figure 3, 200540273273, the CDV strain of the present invention is found to be a new genotype virus. The phylogeny is different from the conventional CDV vaccine strain. The CDV strain currently known in Japan. 98.002 is a prion gene obtained from dog rectal and oral swab samples, which can be used as a determinant-species Whether CM is rampant and has Asian / H2 genotype standards, but cannot directly affect the isolation and identification of individual viruses, because it is not a virus. Based on & Discovery 'will be isolated and identified according to the present invention and contains I'NO. I The shown η gene virus is named "Seoul% virus," which Hidden in the Korea Microbial Collection Center (KCCM) of the Korea Culture Collection Alliance on February 25, 2003, and has the number KCCMHM67. In addition, the present invention provides a recombinant vaccine for canine distemper using the present invention Canine distemper virus in whole or in part and contains pharmaceutically acceptable additives. The pharmaceutically acceptable additives may be selected from those commonly used in the art by those skilled in the art. Recombination for canine distemper The vaccine can be prepared using the canine distemper virus of the present invention by any method known in the art. Preferably, the recombinant vaccine is performed using the whole or a part of the Η gene shown in SEQ ID No. i of canine lean fever virus Preparation. The present invention can be better understood through the following examples. The following examples are provided to illustrate the present invention and should not be construed as limiting the present invention. Example 1: Isolation of canine distemper virus (Step 1) The sample was prepared in September 1998, and the body and blood samples of the Beijing Pug puppies 1 month old were submitted through an animal hospital in Seoul, Korea. The CDV immune history of this puppy is unknown, but it is diagnosed with canine distemper. (Step 2) Evaluation of CDV infection Check the CDV infection with the following, that is, the supernatant taken from the organ of the puppy and using the isolated CDV After sensitization, the supernatant of sensitive cells forming cytopathic effect (CPE) and the DNA of Onderstepoortort gene cloned into plastids are obtained.
將250 μΐ每個樣品與750 μΐ RNA結合鹽(商品名; RNaid Kit,ΒΙΟ101 )充分混合,並與 10 μΐ RNAMATRIX (商品名;RNaid Kit,ΒΙΟ101 )於室溫反應5分鐘,同時 經常進行搖動以防止RNAMATRIX沈澱。將反應混合物於 10,000 rpm離心1分鐘,從而沈澱出RNA和RNAMATRIX 的結合産物。在棄去上清液之後,再次重複進行離心,並 將上清液完全除去。用微量加液器將粒狀沈澱物懸浮在500 μΐ RNA 洗滌溶液(RNaid Kit,BIO101 )中,並於 10,000 rpm 離心1分鐘。在棄去上清液之後,再重複該洗滌步驟兩次。 在最後一次洗滌之後,再離心一次,並將上清液完全除去。 用微量加液器將粒狀沈澱物懸浮在20 μΐ無RNase的蒸餾 水(RNaid Kit,BIO101 )中,並於50°C培育5分鐘以提 取RNA。在將懸浮的粒狀沈殿物於1 5,000 rpm離心2分鐘 之後,將上清液轉移至新的管中。 逆轉錄 將9 μΐ RNA樣品與1 μΐ隨機引子(50 pmol/μΐ, 10 200540273250 μΐ of each sample was thoroughly mixed with 750 μΐ of RNA-binding salt (trade name; RNaid Kit, BIO10101), and reacted with 10 μΐ of RNAMATRIX (trade name; RNaid Kit, BIO10101) at room temperature for 5 minutes, while often shaking to Prevents RNAMATRIX precipitation. The reaction mixture was centrifuged at 10,000 rpm for 1 minute to precipitate a binding product of RNA and RNAMATRIX. After discarding the supernatant, the centrifugation was repeated again, and the supernatant was completely removed. The pellet was suspended in a 500 μΐ RNA wash solution (RNaid Kit, BIO101) using a micro-pipette, and centrifuged at 10,000 rpm for 1 minute. After discarding the supernatant, the washing step was repeated two more times. After the last wash, centrifuge again and remove the supernatant completely. The pellet was suspended in a 20 μΐ RNase-free distilled water (RNaid Kit, BIO101) using a micro-pipette, and incubated at 50 ° C for 5 minutes to extract RNA. After centrifuging the suspended granular pellets at 1 5,000 rpm for 2 minutes, the supernatant was transferred to a new tube. Reverse Transcription 9 μΐ RNA samples and 1 μΐ random primers (50 pmol / μΐ, 10 200540273
TaKaRa)混合,並讓其於70°C反應10分鐘。隨後立即將 樣品置於冰上以終止反應。將初級反應混合物與4 μΐ 5x RT 反應緩衝液(RT AMV XL Kit,TaKaRa)、4 μΐ 10 mM dNTP (RT AMV XL Kit,TaKaRa)和 1 μΐ RNasin ( 20 U/μ卜 Promega)混合,並讓其於25°C反應5分鐘。然後,對結 果所得的反應混合物補充1 μΐ RT AMV XL ( 35 U/μΙ,RT AMV XL Kit,TaKaRa),並以 25°C 10 分鐘、42°C 50 分鐘和70°C 10分鐘的條件進行逆轉錄,從而合成互補 # DNA (下文中稱爲“cDNA” )。 使用聚合酶鏈反應(PCR)鑑定CDV 藉由使用獲得的cDNA以PCR來增幅DNA從而確定 CDV感染。在一個PCR管中,將1 μΐ獲得的cDNA溶液 與 5 μΐ 10x PCR 反應緩衝液、3 μΐ 25 mM MgCl2、4 μΐ 1〇 mM dNTP 、 1 μΐ 弓I 子 I ( CDV H13 , CAA/GAC/AAG/GTG/GGT/GCC/TT,Onderstepoort 的 H 基 因的 lit 33-52 ) 、 1 μΐ 引子 II ( CDV H18 , • CTT/GGT/GAA/ATC/GAA/CTC/CA,Onderstepoort 的 H 基 因的 nt 207-188 ) 、0·5 μΐ Taq 聚合酶(5 U/μ卜 TaKaRa) 和34·5 μΐ無菌蒸餾水混合。用PCR儀在一定條件下進行 PCR,該條件包括:94°C 1分鐘;55°C 30秒、72°C 30 秒和94°C 30秒,30個循環;和最後72°C延伸5分鐘。 然後將PCR産物(175 bp)在1.2%瓊脂糖凝膠上進行電泳。 結果給出在圖1中。 如圖1中所示,電泳結果在下列樣品中是一致的,即 11 200540273 顯示出犬瘟熱症狀的死亡幼犬的腦(泳道1 )、支氣管(泳 道2 )和肺(泳道3 ),以及用從其中分離的CDV致敏的 細胞(泳道4)和Onderstepoort株系(泳道5 )。這些結 果顯示從幼犬分離出其RNA的病毒是CDV。 實施例2 :就本發明的病毒是否具有亞洲/H2基因型進 行評價 (步驟1 ) DNA樣品的製備 cDNA合成TaKaRa) and allowed to react at 70 ° C for 10 minutes. The sample was immediately placed on ice to stop the reaction. Mix the primary reaction mixture with 4 μΐ 5x RT reaction buffer (RT AMV XL Kit, TaKaRa), 4 μΐ 10 mM dNTP (RT AMV XL Kit, TaKaRa), and 1 μΐ RNasin (20 U / μ Promega) and let It was reacted at 25 ° C for 5 minutes. Then, the resulting reaction mixture was supplemented with 1 μΐ of RT AMV XL (35 U / μΙ, RT AMV XL Kit, TaKaRa), and the conditions were performed at 25 ° C for 10 minutes, 42 ° C for 50 minutes, and 70 ° C for 10 minutes. Reverse transcription to synthesize complementary # DNA (hereinafter referred to as "cDNA"). CDV identification using polymerase chain reaction (PCR) CDV infection is determined by PCR amplification using the obtained cDNA. In a PCR tube, mix 1 μΐ of the cDNA solution with 5 μΐ 10x PCR reaction buffer, 3 μΐ 25 mM MgCl2, 4 μΐ 10 mM dNTP, 1 μΐ Bow I I (CDV H13, CAA / GAC / AAG / GTG / GGT / GCC / TT, lit 33-52 of the H gene of Onderstepoort, 1 μΐ primer II (CDV H18, • CTT / GGT / GAA / ATC / GAA / CTC / CA, nt 207 of the H gene of Onderstepoort -188), 0.5 μΐ Taq polymerase (5 U / μ TaKaRa) and 34.5 μΐ sterile distilled water. Perform PCR with a PCR instrument under certain conditions, including: 1 minute at 94 ° C; 30 seconds at 55 ° C, 30 seconds at 72 ° C, and 30 seconds at 94 ° C, 30 cycles; and an extension at 72 ° C for 5 minutes . The PCR product (175 bp) was then run on a 1.2% agarose gel. The results are given in Figure 1. As shown in Figure 1, the electrophoresis results were consistent in the following samples: 11 200540273 brain (lane 1), bronchi (lane 2), and lung (lane 3) of a dead puppies showing canine distemper symptoms, and Cells sensitized with CDV isolated from it (lane 4) and Onderstepoort strain (lane 5). These results show that the virus whose RNA was isolated from puppies is CDV. Example 2: Evaluation of whether the virus of the present invention has the Asian / H2 genotype (Step 1) Preparation of DNA samples cDNA synthesis
將在實施例1中製備的病毒和器官乳液根據與實施例 1同樣的方法進行RT-PCR,以合成cDNA。對於KDK-1、 98-002和Onderstepoort,將事先選殖進質體的Η基因用作 DNA模板。 (步驟2) RFLP分析 使用製備的 cDNA 樣品和參考 DNA 樣品 (Onderstepoort、KDK-1 和 98-002 )進行 RFLP 分析以測 定本發明病毒和常規CDV株系的Η基因基因型。 分析PCR增幅的基因 將DNA用實施例2的步驟1中製備的cDNA進行增 幅。在一個管中,將1 μΐ cDNA溶液與5 μΐ 10x PCR反應 緩衝液、3 μΐ 25 mM MgCl2、4 μΐ 10 mM dNTP、1 μΐ 引子 I ( CDV F10B,TAT/CAT/GAC/RGY/ART/GGT/TC) 、1 μΐ 引子 II ( CDV R10,CTT/GGT/GAA/ATC/GAA/CTC/CA)、 0.5 μΐ Taq 聚合酶(5 U/μΙ,TaKaRa)和 34·5 μΐ 無菌蒸餾 水混合。用PCR儀在一定條件下進行PCR,該條件包括: 12 200540273 94〇C 1分鐘;55°C 2分鐘、72°C 2分鐘和94°C 1分鐘, 35個循環;和最後72°C延伸5分鐘。然後將PCR產物在 1 %瓊脂糖凝膠上進行電泳。發現增幅出的DNA具有87 1 bp 的大小,這相當於Onderstepoort的 Η基因的nt 7,991-8,861 ° 從瑾脂糖凝膠中選擇有效基因 從瓊脂糖凝膠中選擇出有效基因,進行純化,並通過 限制性内切酶消化而就RFLP圖式進行評估。用外科手術The virus and organ emulsion prepared in Example 1 were subjected to RT-PCR according to the same method as in Example 1 to synthesize cDNA. For KDK-1, 98-002, and Onderstepoort, a plutonium gene previously selected into the plastid was used as a DNA template. (Step 2) RFLP analysis RFLP analysis was performed using the prepared cDNA sample and reference DNA sample (Onderstepoort, KDK-1, and 98-002) to determine the genotype genotype of the virus of the present invention and the conventional CDV strain. Analysis of PCR amplified genes DNA was amplified using the cDNA prepared in Step 1 of Example 2. In a tube, mix 1 μΐ cDNA solution with 5 μΐ 10x PCR reaction buffer, 3 μΐ 25 mM MgCl2, 4 μΐ 10 mM dNTP, 1 μΐ Primer I (CDV F10B, TAT / CAT / GAC / RGY / ART / GGT / TC), 1 μΐ Primer II (CDV R10, CTT / GGT / GAA / ATC / GAA / CTC / CA), 0.5 μΐ Taq polymerase (5 U / μΙ, TaKaRa), and 34.5 μΐ sterile distilled water. Perform PCR with a PCR instrument under certain conditions, including: 12 200540273 94 ° C for 1 minute; 55 ° C for 2 minutes, 72 ° C for 2 minutes, and 94 ° C for 1 minute, 35 cycles; and the final 72 ° C extension 5 minutes. The PCR products were then run on a 1% agarose gel. It was found that the amplified DNA has a size of 87 1 bp, which is equivalent to nt 7,991-8,861 of the Onderstepoort's Η gene. Selecting effective genes from agarose gels Selecting effective genes from agarose gels, purifying them, and The RFLP pattern was evaluated by restriction enzyme digestion. With surgery
# 刀從瓊脂糖凝膠中切割出有效基因條帶,同時盡可能地除 去凝膠成分,並用電子稱量儀進行稱重。然後,將凝膠塊 與 200 μΐ Nal 溶液(GENECLEAN II Kit,BIO101 )混合, 於50°C培育5分鐘以溶解凝膠成分,並與10 μΐ GLASSMILK (商品名;GENECLEAN II Kit,ΒΙΟ101 )混合。將反應 混合物於室溫培育 5分鐘,以使得DNA與GLASSMILK 的二氧化矽組分結合,同時經常用手指輕敲管以懸浮二氧 化石夕。然後,將反應混合物於1 0,000 rpm離心5秒以沈澱 • 出與DNA結合的二氧化矽。使用微量加液器將粒狀沈澱 物用 1 ml NEW WASH (商品名;GENECLEAN II Kit, ΒΙΟΙ 01 )進行洗滌,並再重複兩次該洗滌。將管置於真空 中5分鐘以完全除去上清液,並將粒狀沈澱物再次懸浮在 1 5 μΐ無菌水中,並於15,000 rpm離心30秒。將含有有效 基因的上清液轉移至新的無菌管中。再重複該步驟一次, 並將次級上清液和初級上清液合併,於-20°C儲存。 每個病毒DNA的RFLP分析 13 200540273 將從瓊脂糖凝膠中分離的有效基因用限制性内切酶進 行消化,並進行電泳以測定每個病毒DNA的RFLP圖式。 將26 μΐ從瓊脂糖凝膠中分離的有效基因與3 μΐ 1 Ox限制性 内切酶緩衝液(NEBuffer 4,NEB )和 1 μΐ Ndel ( 20 U/μ卜 NEB)混合,並在培養箱中於37°C培育8小時30分鐘。 然後將反應混合物在0.8°/。瓊脂糖凝膠上進行電泳。結果給 出在圖2中。 如圖2中所示,發現已知具有亞洲/H1基因型的KDK- # 1株系(泳道2 )具有不同於已知具有亞洲/H2基因型的 98-002 DNA (泳道3)的RFLP圖式。發現從感染了本發 明的CDV的幼犬中取得的器官懸浮液(泳道5-9 )和病毒 致敏的細胞(泳道4)具有與98-002 DNA同樣的RFLP圖 式。這些結果顯示,不同於以前分離的CDV株系,本發 明的CDV株系屬於亞洲/H2基因型。 實施例3 : Η基因的核苷酸序列分析# The knife cuts the effective gene band from the agarose gel, and at the same time removes the gel component as much as possible, and weighs it with an electronic weighing machine. Then, the gel pieces were mixed with 200 μΐ of Nal solution (GENECLEAN II Kit, BIO101), incubated at 50 ° C. for 5 minutes to dissolve the gel components, and mixed with 10 μΐ of GLASSMILK (trade name; GENECLEAN II Kit, ΙΟ101). Incubate the reaction mixture at room temperature for 5 minutes to allow DNA to bind to the silica component of GLASSMILK, and often tap the tube with your fingers to suspend the dioxide. The reaction mixture was then centrifuged at 10,000 rpm for 5 seconds to precipitate DNA-bound silica. The granular precipitate was washed with 1 ml of NEW WASH (trade name; GENECLEAN II Kit, BIOl 01) using a micro-dispenser, and the washing was repeated two more times. The tube was placed in vacuum for 5 minutes to completely remove the supernatant, and the pellet was suspended again in 15 μΐ of sterile water and centrifuged at 15,000 rpm for 30 seconds. Transfer the supernatant containing the effective gene to a new sterile tube. Repeat this step once more and combine the secondary and primary supernatants and store at -20 ° C. RFLP analysis of each viral DNA 13 200540273 The effective genes isolated from the agarose gel were digested with restriction enzymes and electrophoresed to determine the RFLP pattern of each viral DNA. Mix 26 μΐ of the effective genes isolated from the agarose gel with 3 μΐ 1 Ox restriction enzyme buffer (NEBuffer 4, NEB) and 1 μΐ Ndel (20 U / μ NEB) and mix in an incubator Incubate at 37 ° C for 8 hours and 30 minutes. The reaction mixture was then at 0.8 ° /. Electrophoresis was performed on an agarose gel. The results are given in Figure 2. As shown in Figure 2, KDK- # 1 strain (lane 2) known to have the Asian / H1 genotype was found to have an RFLP map different from 98-002 DNA (lane 3) known to have the Asian / H2 genotype formula. Organ suspensions (lanes 5-9) and virus-sensitized cells (lanes 4) obtained from puppies infected with the CDV of the present invention were found to have the same RFLP pattern as 98-002 DNA. These results show that, unlike previously isolated CDV strains, the CDV strains of the present invention belong to the Asian / H2 genotype. Example 3: Nucleotide sequence analysis of the tadpole gene
在藉由使用實施例1 (步驟2 )中製備的cDNA以PCR • 增幅出編碼Η基因的DN A之後,對於本發明的犬瘟熱病 毒(亞洲/H2基因型)的Η基因核苷酸序列進行分析。在 一個PCR管中,將1 μΐ cDNA溶液與5 μΐ 10x PCR反應 緩衝液、3 μΐ 25 mM MgCl2、4 μΐ 10 mM dNTP、1 μΐ 引子 I( CDV F8, GTT/GTT/GCT/GAT/TTA/CTG/TT,Onderstepoort 的 H 基因的 nt 6800-6819 ) 、1 μΐ 引子 II ( CDV R8, CCC/CGT/CTG/TTA/TTT/TGC/TA,Onderstepoort 的 H 基 因的 nt 9399-93 80 )、0.5 μΐ EX Taq 聚合酶(5 U/μΙ,TaKaRa) 14 200540273 和34.5 μΐ無菌蒸餾水混合。用PCR儀在一定條件下進^ PCR,該條件包括·· 94°C 1分鐘30秒;52。广】\ ^ 1分鐘3〇 秒、72°C 2分鐘和94°C 1分鐘30秒,35個循環;和最 後72°C延伸20分鐘。然後將PCR産物插入選殖載= (PTZ57R,MBI Fermentas )中。然後,測定本發明的犬 瘟熱病毒(亞洲/H2基因型)的Η基因核苷酸序列,該序 列如SED ID NO· 1所示。 有利的效果 如前所述,本發明提供了新穎韓國犬瘟熱病毒,該病 毒特別是在韓國於引起犬瘟熱的犬瘟熱病毒之中發現的, 也提供了使用該病毒的用於犬痙熱的重組疫苗。 【圖式簡單說明】 圖1顯示了用於確定本發明的病毒是否爲CDV (犬瘟 熱病毒)的電泳分析結果。 圖2顯示了用於確定本發明的病毒是否爲屬於亞洲/h2 基因型的CDV的RFLP分析結果。 圖3顯示了本發明的韓國CDV的Η基因核苷酸序列 在系統樹中的位置。 【主要元件符號說明】 ( 無 ) 15After using the cDNA prepared in Example 1 (Step 2) to PCR-amplify the DNA encoding the Η gene, the nucleotide sequence of the Η gene of the canine distemper virus (Asia / H2 genotype) of the present invention was amplified. Perform analysis. In a PCR tube, mix 1 μΐ cDNA solution with 5 μΐ 10x PCR reaction buffer, 3 μΐ 25 mM MgCl2, 4 μΐ 10 mM dNTP, 1 μΐ Primer I (CDV F8, GTT / GTT / GCT / GAT / TTA / CTG / TT, nt 6800-6819 of the H gene of Onderstepoort), 1 μΐ primer II (CDV R8, CCC / CGT / CTG / TTA / TTT / TGC / TA, nt 9399-93 80 of the H gene of Onderstepoort), 0.5 μΐ EX Taq polymerase (5 U / μΙ, TaKaRa) 14 200540273 and 34.5 μΐ sterile distilled water were mixed. Use a PCR instrument to perform PCR under certain conditions, including 94 ° C for 1 minute and 30 seconds; 52. Cantonese: 1 minute and 30 seconds, 72 ° C for 2 minutes, and 94 ° C for 1 minute and 30 seconds, 35 cycles; and the final 72 ° C extension for 20 minutes. The PCR product was then inserted into a colony load = (PTZ57R, MBI Fermentas). Then, the nucleotide sequence of the plutonium gene of the canine distemper virus (Asia / H2 genotype) of the present invention was determined, and the sequence is shown in SED ID NO · 1. [Advantageous Effects] As mentioned above, the present invention provides a novel Korean canine distemper virus, which is particularly found in South Korea among canine distemper viruses that cause canine distemper, and also provides a virus for dogs using the virus. Spasmic recombinant vaccine. [Brief Description of the Drawings] Fig. 1 shows the results of electrophoretic analysis for determining whether the virus of the present invention is CDV (Canine Distemper Virus). Figure 2 shows the results of an RFLP analysis used to determine whether the virus of the present invention is a CDV belonging to the Asian / h2 genotype. Fig. 3 shows the position of the nucleotide sequence of the plutonium gene of the Korean CDV of the present invention in the phylogenetic tree. [Description of Symbols of Main Components] (None) 15
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