SI3178941T1 - Postopek za določanje deleža brezceličnih fetalnih nukleinskih kislin v vzorcu periferne krvi nosečnice in njegova uporaba - Google Patents

Postopek za določanje deleža brezceličnih fetalnih nukleinskih kislin v vzorcu periferne krvi nosečnice in njegova uporaba

Info

Publication number
SI3178941T1
SI3178941T1 SI201531771T SI201531771T SI3178941T1 SI 3178941 T1 SI3178941 T1 SI 3178941T1 SI 201531771 T SI201531771 T SI 201531771T SI 201531771 T SI201531771 T SI 201531771T SI 3178941 T1 SI3178941 T1 SI 3178941T1
Authority
SI
Slovenia
Prior art keywords
fraction
cell
determining
nucleic acids
blood sample
Prior art date
Application number
SI201531771T
Other languages
English (en)
Inventor
Fuman Jiang
Yuying Yuan
Wei Wang
Ye Yin
Original Assignee
Bgi Genomics Co., Limited
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Bgi Genomics Co., Limited filed Critical Bgi Genomics Co., Limited
Publication of SI3178941T1 publication Critical patent/SI3178941T1/sl

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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869Methods for sequencing
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B15/00ICT specially adapted for analysing two-dimensional or three-dimensional molecular structures, e.g. structural or functional relations or structure alignment
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B15/00ICT specially adapted for analysing two-dimensional or three-dimensional molecular structures, e.g. structural or functional relations or structure alignment
    • G16B15/10Nucleic acid folding
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/10Ploidy or copy number detection
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/20Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10Sequence alignment; Homology search

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biophysics (AREA)
  • Biotechnology (AREA)
  • General Health & Medical Sciences (AREA)
  • Analytical Chemistry (AREA)
  • Organic Chemistry (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Evolutionary Biology (AREA)
  • Medical Informatics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Theoretical Computer Science (AREA)
  • Molecular Biology (AREA)
  • Genetics & Genomics (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Biochemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Crystallography & Structural Chemistry (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
SI201531771T 2014-07-25 2015-07-24 Postopek za določanje deleža brezceličnih fetalnih nukleinskih kislin v vzorcu periferne krvi nosečnice in njegova uporaba SI3178941T1 (sl)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
CN201410359726 2014-07-25
PCT/CN2015/085109 WO2016011982A1 (zh) 2014-07-25 2015-07-24 确定生物样本中游离核酸比例的方法、装置及其用途
EP15825462.3A EP3178941B1 (en) 2014-07-25 2015-07-24 Method for determining the fraction of cell-free fetal nucleic acids in a peripheral blood sample from a pregnant woman and use thereof

Publications (1)

Publication Number Publication Date
SI3178941T1 true SI3178941T1 (sl) 2022-04-29

Family

ID=55162536

Family Applications (1)

Application Number Title Priority Date Filing Date
SI201531771T SI3178941T1 (sl) 2014-07-25 2015-07-24 Postopek za določanje deleža brezceličnih fetalnih nukleinskih kislin v vzorcu periferne krvi nosečnice in njegova uporaba

Country Status (17)

Country Link
US (1) US20180082012A1 (sl)
EP (1) EP3178941B1 (sl)
KR (1) KR102018444B1 (sl)
CN (1) CN105296606B (sl)
AU (1) AU2015292020B2 (sl)
CA (1) CA2956105C (sl)
DK (1) DK3178941T3 (sl)
ES (1) ES2903103T3 (sl)
HK (1) HK1213601A1 (sl)
HR (1) HRP20220045T1 (sl)
HU (1) HUE059031T2 (sl)
PL (1) PL3178941T3 (sl)
RS (1) RS62803B1 (sl)
RU (1) RU2699728C2 (sl)
SG (1) SG11201700602WA (sl)
SI (1) SI3178941T1 (sl)
WO (1) WO2016011982A1 (sl)

Families Citing this family (22)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US9260753B2 (en) 2011-03-24 2016-02-16 President And Fellows Of Harvard College Single cell nucleic acid detection and analysis
US10876152B2 (en) 2012-09-04 2020-12-29 Guardant Health, Inc. Systems and methods to detect rare mutations and copy number variation
IL305303A (en) 2012-09-04 2023-10-01 Guardant Health Inc Systems and methods for detecting rare mutations and changes in number of copies
US11913065B2 (en) 2012-09-04 2024-02-27 Guardent Health, Inc. Systems and methods to detect rare mutations and copy number variation
US20160040229A1 (en) 2013-08-16 2016-02-11 Guardant Health, Inc. Systems and methods to detect rare mutations and copy number variation
CN106062214B (zh) 2013-12-28 2020-06-09 夸登特健康公司 用于检测遗传变异的方法和系统
EP3390668A4 (en) 2015-12-17 2020-04-01 Guardant Health, Inc. METHODS OF DETERMINING THE NUMBER OF TUMOR GENE COPIES BY ACELLULAR DNA ANALYSIS
US9850523B1 (en) 2016-09-30 2017-12-26 Guardant Health, Inc. Methods for multi-resolution analysis of cell-free nucleic acids
WO2018064629A1 (en) 2016-09-30 2018-04-05 Guardant Health, Inc. Methods for multi-resolution analysis of cell-free nucleic acids
EP3575407B1 (en) * 2017-01-24 2024-03-27 BGI Genomics Co., Ltd. Method for determining proportion of cell-free nucleic acids from predetermined source in biological sample
AU2018212272B2 (en) * 2017-01-25 2022-04-28 Grail, Inc. Diagnostic applications using nucleic acid fragments
JP2020512000A (ja) * 2017-03-31 2020-04-23 プレマイサ リミテッド 胎児の染色体異常を検出する方法
EP3635138A1 (en) * 2017-05-15 2020-04-15 Katholieke Universiteit Leuven Method for analysing cell-free nucleic acids
CN107239676B (zh) * 2017-05-17 2018-04-17 东莞博奥木华基因科技有限公司 一种针对胚胎染色体的序列数据处理装置
CN108733979A (zh) * 2017-10-30 2018-11-02 成都凡迪医疗器械有限公司 Nipt的gc含量校准方法、装置及计算机可读存储介质
CN108060218A (zh) * 2017-11-14 2018-05-22 广州精科医学检验所有限公司 核酸测序文库中预定范围的核酸片段的筛选方法
CN113286881A (zh) 2018-09-27 2021-08-20 格里尔公司 甲基化标记和标靶甲基化探针板
CN113661249A (zh) 2019-01-31 2021-11-16 夸登特健康公司 用于分离无细胞dna的组合物和方法
US11211147B2 (en) 2020-02-18 2021-12-28 Tempus Labs, Inc. Estimation of circulating tumor fraction using off-target reads of targeted-panel sequencing
US11211144B2 (en) 2020-02-18 2021-12-28 Tempus Labs, Inc. Methods and systems for refining copy number variation in a liquid biopsy assay
US11475981B2 (en) 2020-02-18 2022-10-18 Tempus Labs, Inc. Methods and systems for dynamic variant thresholding in a liquid biopsy assay
WO2023010242A1 (zh) * 2021-08-02 2023-02-09 深圳华大生命科学研究院 估计无创产前基因检测数据中胎儿核酸浓度的方法和系统

Family Cites Families (8)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
AU2006224971B2 (en) * 2005-03-18 2009-07-02 Boston University A method for the detection of chromosomal aneuploidies
CN102782158A (zh) * 2010-01-15 2012-11-14 不列颠哥伦比亚大学 用于检测核酸变异的多重扩增
EP2633311A4 (en) * 2010-10-26 2014-05-07 Univ Stanford NON-INVASIVE F TAL GENE SCREENING BY SEQUENCING ANALYSIS
US9892230B2 (en) * 2012-03-08 2018-02-13 The Chinese University Of Hong Kong Size-based analysis of fetal or tumor DNA fraction in plasma
EP2728014B1 (en) * 2012-10-31 2015-10-07 Genesupport SA Non-invasive method for detecting a fetal chromosomal aneuploidy
WO2014075228A1 (zh) * 2012-11-13 2014-05-22 深圳华大基因医学有限公司 确定生物样本中染色体数目异常的方法、系统和计算机可读介质
CN103525939B (zh) * 2013-10-28 2015-12-02 博奥生物集团有限公司 无创检测胎儿染色体非整倍体的方法和系统
CN103923987A (zh) * 2014-04-01 2014-07-16 中山大学达安基因股份有限公司 一种基于高通量测序检测13、18、21三体综合征的方法

Also Published As

Publication number Publication date
EP3178941A1 (en) 2017-06-14
HUE059031T2 (hu) 2022-10-28
CA2956105A1 (en) 2016-01-28
EP3178941B1 (en) 2021-10-13
AU2015292020A1 (en) 2017-02-16
RU2699728C2 (ru) 2019-09-09
RS62803B1 (sr) 2022-02-28
US20180082012A1 (en) 2018-03-22
SG11201700602WA (en) 2017-03-30
CN105296606A (zh) 2016-02-03
RU2017105504A (ru) 2018-08-27
ES2903103T3 (es) 2022-03-31
RU2017105504A3 (sl) 2018-08-27
AU2015292020B2 (en) 2018-07-05
DK3178941T3 (da) 2022-01-17
CN105296606B (zh) 2019-08-09
HRP20220045T1 (hr) 2022-04-15
EP3178941A4 (en) 2017-12-06
KR20170036734A (ko) 2017-04-03
CA2956105C (en) 2021-04-27
KR102018444B1 (ko) 2019-09-04
WO2016011982A1 (zh) 2016-01-28
HK1213601A1 (zh) 2016-07-08
BR112017001481A2 (pt) 2017-12-05
PL3178941T3 (pl) 2022-02-14

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