SG184480A1 - VISUALIZATION TOOL FOR qPCR GENOTYPING DATA - Google Patents

VISUALIZATION TOOL FOR qPCR GENOTYPING DATA Download PDF

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Publication number
SG184480A1
SG184480A1 SG2012074423A SG2012074423A SG184480A1 SG 184480 A1 SG184480 A1 SG 184480A1 SG 2012074423 A SG2012074423 A SG 2012074423A SG 2012074423 A SG2012074423 A SG 2012074423A SG 184480 A1 SG184480 A1 SG 184480A1
Authority
SG
Singapore
Prior art keywords
data
data set
processor
plot
end user
Prior art date
Application number
SG2012074423A
Other languages
English (en)
Inventor
Gordon Janaway
Evelyn Wing-Sim Chan
Original Assignee
Life Technologies Corp
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Life Technologies Corp filed Critical Life Technologies Corp
Publication of SG184480A1 publication Critical patent/SG184480A1/en

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Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/20—Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
    • G—PHYSICS
    • G06—COMPUTING OR CALCULATING; COUNTING
    • G06F—ELECTRIC DIGITAL DATA PROCESSING
    • G06F3/00—Input arrangements for transferring data to be processed into a form capable of being handled by the computer; Output arrangements for transferring data from processing unit to output unit, e.g. interface arrangements
    • G06F3/01—Input arrangements or combined input and output arrangements for interaction between user and computer
    • G06F3/048—Interaction techniques based on graphical user interfaces [GUI]
    • G06F3/0481—Interaction techniques based on graphical user interfaces [GUI] based on specific properties of the displayed interaction object or a metaphor-based environment, e.g. interaction with desktop elements like windows or icons, or assisted by a cursor's changing behaviour or appearance
    • G06F3/0482—Interaction with lists of selectable items, e.g. menus
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G16B40/10—Signal processing, e.g. from mass spectrometry [MS] or from PCR
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B45/00—ICT specially adapted for bioinformatics-related data visualisation, e.g. displaying of maps or networks
    • G—PHYSICS
    • G06—COMPUTING OR CALCULATING; COUNTING
    • G06F—ELECTRIC DIGITAL DATA PROCESSING
    • G06F3/00—Input arrangements for transferring data to be processed into a form capable of being handled by the computer; Output arrangements for transferring data from processing unit to output unit, e.g. interface arrangements
    • G06F3/01—Input arrangements or combined input and output arrangements for interaction between user and computer
    • G06F3/048—Interaction techniques based on graphical user interfaces [GUI]
    • G06F3/0484—Interaction techniques based on graphical user interfaces [GUI] for the control of specific functions or operations, e.g. selecting or manipulating an object, an image or a displayed text element, setting a parameter value or selecting a range
    • G06F3/0485—Scrolling or panning

Landscapes

  • Engineering & Computer Science (AREA)
  • Physics & Mathematics (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Theoretical Computer Science (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Medical Informatics (AREA)
  • General Health & Medical Sciences (AREA)
  • Biophysics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Biotechnology (AREA)
  • Evolutionary Biology (AREA)
  • Molecular Biology (AREA)
  • Data Mining & Analysis (AREA)
  • Chemical & Material Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Genetics & Genomics (AREA)
  • Analytical Chemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Human Computer Interaction (AREA)
  • General Physics & Mathematics (AREA)
  • Artificial Intelligence (AREA)
  • Epidemiology (AREA)
  • Evolutionary Computation (AREA)
  • Public Health (AREA)
  • Software Systems (AREA)
  • Databases & Information Systems (AREA)
  • Computer Vision & Pattern Recognition (AREA)
  • Bioethics (AREA)
  • Signal Processing (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
  • User Interface Of Digital Computer (AREA)
SG2012074423A 2010-04-09 2011-04-08 VISUALIZATION TOOL FOR qPCR GENOTYPING DATA SG184480A1 (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US32274910P 2010-04-09 2010-04-09
PCT/US2011/031855 WO2011127454A2 (en) 2010-04-09 2011-04-08 VISUALIZATION TOOL FOR qPCR GENOTYPING DATA

Publications (1)

Publication Number Publication Date
SG184480A1 true SG184480A1 (en) 2012-11-29

Family

ID=44761837

Family Applications (1)

Application Number Title Priority Date Filing Date
SG2012074423A SG184480A1 (en) 2010-04-09 2011-04-08 VISUALIZATION TOOL FOR qPCR GENOTYPING DATA

Country Status (6)

Country Link
US (4) US8572506B2 (cg-RX-API-DMAC7.html)
EP (1) EP2556458B1 (cg-RX-API-DMAC7.html)
JP (2) JP5908886B2 (cg-RX-API-DMAC7.html)
CN (1) CN103069427B (cg-RX-API-DMAC7.html)
SG (1) SG184480A1 (cg-RX-API-DMAC7.html)
WO (1) WO2011127454A2 (cg-RX-API-DMAC7.html)

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JP5908886B2 (ja) 2010-04-09 2016-04-26 ライフ テクノロジーズ コーポレーション ｑＰＣＲ遺伝子型決定データ用の視覚化ツール
WO2014074735A2 (en) 2012-11-07 2014-05-15 Life Technologies Corporation Visualization tools for digital pcr data
EP3014506B1 (en) * 2013-06-28 2020-01-22 Life Technologies Corporation Methods and systems for visualizing dpcr data quality
WO2015134130A1 (en) * 2014-03-03 2015-09-11 Life Technologies Corporation A graphical user interface system and method for transferring data acquisition and analysis settings
SG11201706356XA (en) * 2015-02-06 2017-09-28 Life Technologies Corp Methods and systems for experiment design and analysis
WO2016197028A1 (en) 2015-06-05 2016-12-08 Life Technologies Corporation Determining the limit of detection of rare targets using digital pcr
WO2017015133A1 (en) * 2015-07-17 2017-01-26 Life Technologies Corporation Tool for visualizing pcr results
US11410751B2 (en) * 2016-05-27 2022-08-09 Life Technologies Corporation Methods and systems for graphical user interfaces for biological data
CN108107024A (zh) * 2016-11-25 2018-06-01 苏州百源基因技术有限公司 一种智能化pcr仪
WO2019066238A2 (ko) * 2017-09-28 2019-04-04 주식회사 씨젠 증폭 데이터 표시 방법 및 장치
US20200075129A1 (en) * 2018-08-30 2020-03-05 Life Technologies Corporation Machine learning system for genotyping pcr assays
CN110176277A (zh) * 2019-06-06 2019-08-27 福州大学 一套基于图像识别技术的智能qPCR仪检测系统

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Also Published As

Publication number Publication date
WO2011127454A2 (en) 2011-10-13
CN103069427B (zh) 2016-11-23
EP2556458B1 (en) 2020-06-03
US9390227B2 (en) 2016-07-12
US10629290B2 (en) 2020-04-21
US8572506B2 (en) 2013-10-29
US10127348B2 (en) 2018-11-13
JP2016127825A (ja) 2016-07-14
US20170011165A1 (en) 2017-01-12
EP2556458A4 (en) 2016-03-16
JP2013523167A (ja) 2013-06-17
EP2556458A2 (en) 2013-02-13
WO2011127454A3 (en) 2011-12-29
US20140053095A1 (en) 2014-02-20
US20190130995A1 (en) 2019-05-02
JP5908886B2 (ja) 2016-04-26
US20110252353A1 (en) 2011-10-13
CN103069427A (zh) 2013-04-24

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