SG11201903066RA - Method for multiplex detection of methylated dna - Google Patents
Method for multiplex detection of methylated dnaInfo
- Publication number
- SG11201903066RA SG11201903066RA SG11201903066RA SG11201903066RA SG11201903066RA SG 11201903066R A SG11201903066R A SG 11201903066RA SG 11201903066R A SG11201903066R A SG 11201903066RA SG 11201903066R A SG11201903066R A SG 11201903066RA SG 11201903066R A SG11201903066R A SG 11201903066RA
- Authority
- SG
- Singapore
- Prior art keywords
- target dna
- oligonucleotide
- target
- methylated dna
- detecting methylation
- Prior art date
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/6858—Allele-specific amplification
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
- C12Q1/6886—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/686—Polymerase chain reaction [PCR]
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6806—Preparing nucleic acids for analysis, e.g. for polymerase chain reaction [PCR] assay
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2527/00—Reactions demanding special reaction conditions
- C12Q2527/125—Specific component of sample, medium or buffer
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2531/00—Reactions of nucleic acids characterised by
- C12Q2531/10—Reactions of nucleic acids characterised by the purpose being amplify/increase the copy number of target nucleic acid
- C12Q2531/107—Probe or oligonucleotide ligation
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2537/00—Reactions characterised by the reaction format or use of a specific feature
- C12Q2537/10—Reactions characterised by the reaction format or use of a specific feature the purpose or use of
- C12Q2537/143—Multiplexing, i.e. use of multiple primers or probes in a single reaction, usually for simultaneously analyse of multiple analysis
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2565/00—Nucleic acid analysis characterised by mode or means of detection
- C12Q2565/10—Detection mode being characterised by the assay principle
- C12Q2565/101—Interaction between at least two labels
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/154—Methylation markers
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/16—Primer sets for multiplex assays
Landscapes
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Health & Medical Sciences (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Engineering & Computer Science (AREA)
- Analytical Chemistry (AREA)
- Genetics & Genomics (AREA)
- Immunology (AREA)
- Molecular Biology (AREA)
- General Engineering & Computer Science (AREA)
- Biotechnology (AREA)
- Biophysics (AREA)
- Physics & Mathematics (AREA)
- Biochemistry (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Microbiology (AREA)
- General Health & Medical Sciences (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Pathology (AREA)
- Hospice & Palliative Care (AREA)
- Oncology (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Abstract
The present disclosure relates to a method of detecting methylation of target DNA in a multiplex manner and a composition for detecting methylation of target DNA, and more particularly to a method for detecting methylation of target DNA, comprising: constructing an oligonucleotide, which comprises a target-specific sequence capable of binding complementarily to the target DNA and a universal primer that does not bind complementarily to the target DNA; linearly 10 amplifying the target DNA for linear target enrichment by using the oligonucleotide as a primer; and amplifying the linearly amplified target DNA using an oligonucleotide, which is capable of binding complementarily to the linearly amplified target DNA, a universal primer, and a probe. 15 -50-
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
KR1020160129110A KR102006803B1 (en) | 2016-10-06 | 2016-10-06 | A Method for Multiple Detection of Methylated DNA |
PCT/KR2017/010907 WO2018066910A1 (en) | 2016-10-06 | 2017-09-29 | Multiple detection method of methylated dna |
Publications (1)
Publication Number | Publication Date |
---|---|
SG11201903066RA true SG11201903066RA (en) | 2019-05-30 |
Family
ID=61831748
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
SG11201903066RA SG11201903066RA (en) | 2016-10-06 | 2017-09-29 | Method for multiplex detection of methylated dna |
Country Status (9)
Country | Link |
---|---|
US (1) | US11186866B2 (en) |
EP (1) | EP3524688B1 (en) |
JP (1) | JP6968894B2 (en) |
KR (1) | KR102006803B1 (en) |
CN (1) | CN109952381B (en) |
AU (1) | AU2017339984B2 (en) |
ES (1) | ES2936408T3 (en) |
SG (1) | SG11201903066RA (en) |
WO (1) | WO2018066910A1 (en) |
Families Citing this family (10)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
AU2018256387A1 (en) | 2017-04-19 | 2019-10-31 | Singlera Genomics, Inc. | Compositions and methods for library construction and sequence analysis |
JP7477183B2 (en) * | 2019-04-22 | 2024-05-01 | ポステック・リサーチ・アンド・ビジネス・ディベロップメント・ファウンデーション | Novel isothermal single reaction probe set and its use |
KR102280363B1 (en) * | 2019-06-18 | 2021-07-22 | (주)지노믹트리 | A Method for Detection of Methylated SDC2 Gene |
KR102261606B1 (en) * | 2019-11-07 | 2021-06-07 | (주)지노믹트리 | Method for Detection of Colorectal Cancer |
WO2021097252A1 (en) * | 2019-11-13 | 2021-05-20 | Bradley Bernstein | Methylation assays and uses thereof |
CN111549129B (en) * | 2020-03-30 | 2023-08-29 | 宁波美康盛德医学检验所有限公司 | Kit for detecting gastric cancer and application thereof |
CN111653311B (en) * | 2020-05-29 | 2023-05-12 | 武汉爱基百客生物科技有限公司 | Multiplex methylation specific PCR primer design method and system |
CN111676286B (en) * | 2020-05-29 | 2023-04-14 | 武汉爱基百客生物科技有限公司 | Multiplex PCR primer system for detecting free DNA methylation of lung cancer plasma, detection method and application |
CN114645077A (en) * | 2020-12-17 | 2022-06-21 | 厦门大学 | Method and kit for detecting existence or proportion of donor in receptor sample |
CN117980497A (en) * | 2021-04-06 | 2024-05-03 | X基因组公司 | Systems, methods, and compositions for detecting epigenetic modifications of nucleic acids |
Family Cites Families (8)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US5784146A (en) | 1995-12-28 | 1998-07-21 | Nidek Co., Ltd | Ophthalmic measurement apparatus |
US5786146A (en) * | 1996-06-03 | 1998-07-28 | The Johns Hopkins University School Of Medicine | Method of detection of methylated nucleic acid using agents which modify unmethylated cytosine and distinguishing modified methylated and non-methylated nucleic acids |
WO2005108618A2 (en) * | 2004-04-30 | 2005-11-17 | Applera Corporation | Methods and kits for methylation detection |
US20060188910A1 (en) * | 2005-02-18 | 2006-08-24 | Applera Corporation | Compositions, methods, and kits for analyzing DNA methylation |
WO2007047572A2 (en) * | 2005-10-14 | 2007-04-26 | Cleveland State University | Methods for identifying multiple dna alteration markers in a large background of wild-type dna |
US9090941B2 (en) * | 2006-12-19 | 2015-07-28 | Cornell Research Foundation, Inc. | Use of lecithin:retinol acyl transferase gene promoter methylation in evaluating the cancer state of subject |
KR101255769B1 (en) * | 2010-12-16 | 2013-04-19 | (주)지노믹트리 | Method for Detecting Methylation of Colorectal Cancer Specific Methylation Marker Gene for Colorectal Cancer Diagnosis |
KR101561034B1 (en) * | 2014-04-02 | 2015-10-15 | (주)지노믹트리 | Method for Methylation Detection of Converted DNA by Bisulfite-Treatment Using Inosine-containing Modified Primers |
-
2016
- 2016-10-06 KR KR1020160129110A patent/KR102006803B1/en active IP Right Grant
-
2017
- 2017-09-29 CN CN201780069147.8A patent/CN109952381B/en active Active
- 2017-09-29 EP EP17858704.4A patent/EP3524688B1/en active Active
- 2017-09-29 ES ES17858704T patent/ES2936408T3/en active Active
- 2017-09-29 AU AU2017339984A patent/AU2017339984B2/en active Active
- 2017-09-29 SG SG11201903066RA patent/SG11201903066RA/en unknown
- 2017-09-29 WO PCT/KR2017/010907 patent/WO2018066910A1/en unknown
- 2017-09-29 JP JP2019540498A patent/JP6968894B2/en active Active
- 2017-09-29 US US16/339,694 patent/US11186866B2/en active Active
Also Published As
Publication number | Publication date |
---|---|
KR20180038252A (en) | 2018-04-16 |
JP6968894B2 (en) | 2021-11-24 |
AU2017339984B2 (en) | 2021-02-04 |
JP2019536474A (en) | 2019-12-19 |
KR102006803B1 (en) | 2019-08-05 |
EP3524688A1 (en) | 2019-08-14 |
US11186866B2 (en) | 2021-11-30 |
CN109952381B (en) | 2022-10-14 |
EP3524688B1 (en) | 2022-12-14 |
WO2018066910A1 (en) | 2018-04-12 |
AU2017339984A1 (en) | 2019-05-23 |
US20190284608A1 (en) | 2019-09-19 |
EP3524688A4 (en) | 2020-05-13 |
CN109952381A (en) | 2019-06-28 |
ES2936408T3 (en) | 2023-03-16 |
Similar Documents
Publication | Publication Date | Title |
---|---|---|
SG11201903066RA (en) | Method for multiplex detection of methylated dna | |
NZ760987A (en) | Application of cas protein, method for detecting target nucleic acid molecule and kit | |
AU2018234832A1 (en) | CRISPR effector system based diagnostics for virus detection | |
PH12018501159A1 (en) | Composition and methods for immunooncology | |
EP4299760A3 (en) | Probes for improved melt discrimination and multiplexing in nucleic acid assays | |
EP4303314A3 (en) | Polypeptide tagged nucleotides and use thereof in nucleic acid sequencing by nanopore detection | |
WO2016064894A3 (en) | Compositions and methods for detecting an rna virus | |
WO2015160895A3 (en) | Modified transposases for improved insertion sequence bias and increased dna input tolerance | |
IN2015DN02793A (en) | ||
WO2015058008A3 (en) | Enhanced nucleic acid identification and detection | |
IN2015DN00194A (en) | ||
GB201317477D0 (en) | Methods, compositions and kits for determing the presence/absnece of a variant nucleic acid sequence | |
NZ701145A (en) | Compositions and methods for quantifying a nucleic acid sequence in a sample | |
BR112015023398A8 (en) | METHODS TO AMPLIFY NUCLEIC ACIDS | |
MX2017001405A (en) | Detection of target nucleic acids using hybridization. | |
SG10201806000YA (en) | Primer set for pcr for bacterial dna amplification, kit for detection and/or identification of bacterial species, and, method of detection and/or identification of bacterial species | |
EA038921B9 (en) | Detection of target nucleic acid and variants thereof | |
CO2018011856A2 (en) | Compositions, methods and kits for the synthesis and detection of nucleic acids | |
MX363880B (en) | Cooperative primers, probes, and applications thereof. | |
WO2014143714A3 (en) | Methods for one step nucleic acid amplification of non-eluted samples | |
MX2016008447A (en) | Methods and systems for nucleic acid amplification. | |
MX2017001134A (en) | Compositions and methods for the detection and analysis of mycobacterium tuberculosis. | |
WO2016027162A3 (en) | Methods and compositions for nucleic acid detection | |
MX2016006602A (en) | Nucleic Acid Amplification. | |
MX2017003473A (en) | Hybrid multi-step nucleic acid amplification. |