NZ543853A - Indole derivatives with apoptosis-inducing effect - Google Patents

Indole derivatives with apoptosis-inducing effect

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Publication number
NZ543853A
NZ543853A NZ543853A NZ54385304A NZ543853A NZ 543853 A NZ543853 A NZ 543853A NZ 543853 A NZ543853 A NZ 543853A NZ 54385304 A NZ54385304 A NZ 54385304A NZ 543853 A NZ543853 A NZ 543853A
Authority
NZ
New Zealand
Prior art keywords
substituted
alkyl
unsubstituted
chlorobenzyl
indol
Prior art date
Application number
NZ543853A
Inventor
Matthias Gerlach
Tilmann Schuster
Peter Emig
Peter Schmidt
Silke Bassner
Eckhard Gunther
Original Assignee
Zentaris Gmbh
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from EP03012868A external-priority patent/EP1484329A1/en
Priority claimed from EP04011598A external-priority patent/EP1595878A1/en
Application filed by Zentaris Gmbh filed Critical Zentaris Gmbh
Publication of NZ543853A publication Critical patent/NZ543853A/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D401/00Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom
    • C07D401/02Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings
    • C07D401/12Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings linked by a chain containing hetero atoms as chain links
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P35/00Antineoplastic agents
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D403/00Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00
    • C07D403/02Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00 containing two hetero rings
    • C07D403/12Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00 containing two hetero rings linked by a chain containing hetero atoms as chain links
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D471/00Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00
    • C07D471/02Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00 in which the condensed system contains two hetero rings
    • C07D471/04Ortho-condensed systems
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B82NANOTECHNOLOGY
    • B82YSPECIFIC USES OR APPLICATIONS OF NANOSTRUCTURES; MEASUREMENT OR ANALYSIS OF NANOSTRUCTURES; MANUFACTURE OR TREATMENT OF NANOSTRUCTURES
    • B82Y5/00Nanobiotechnology or nanomedicine, e.g. protein engineering or drug delivery

Abstract

Disclosed is an indole derivative of formula I, or a tautomer, stereoisomer or pharmaceutically acceptable salt thereof, wherein R is an optionally substituted heterocycle, R1 is an optionally substituted alkyl-aryl, R2 is hydrogen or an optionally substituted C1-6alkyl, R7 is C1-6alkylcarbonyl or C1-6alkoxycarbonyl, X and Y are each oxygen or sulphur, and wherein the rest of the substituents are as defined in the specification. Also disclosed is the use of the compound to treat tumor diseases, especially where the tumor disease involves drug resistance against other active compounds, or involves a metastasizing carcinoma.

Description

543853 I 111 III III 111 U 0 U D 0 WO 2004/10870L *10056730754* PCT/EP2004/005593 Indole derivatives with apoptosis-inducing effect The present invention relates to novel indole derivatives which have a better biological effect, which are better tolerated, which exhibit better oral bioavailability and which are employed as drugs for treating tumor diseases, in particular when drug resistance exists against other active compounds and when a carcinoma is metastasizing.
The treatment of cancer diseases is of great importance in medicine. There is a worldwide need for effective cancer therapies in order to achieve a treatment which is appropriate to a patient and is target-orientated.
This can be seen in the large number of scientific studies which have recently appeared in the fields of applied oncology and fundamental research relating to cancer therapy.
The effects of tumor inhibitors are due to a very wide variety of mechanisms, only some of which are known. It is not unusual for known tumor drugs to be found to have new mechanisms of action. This is also to be expected in the case of the compounds according to the 25 invention. Many tumor drugs act by way of mechanisms such as blockading the mechanism of cell division in the cell, preventing the tumor from being supplied with nutrients and oxygen (antiangiogenesis) , preventing metastasis, preventing the reception and the onward 30 transmission of growth signals to the tumor cell or forcing the tumor cell into programed cell death (apoptosis).
Because they have different mechanisms of action, 35 including interacting with different intracellular targets, the clinically relevant cytostatic agents are frequently administered in combination in order to achieve a synergistic therapeutic effect.
INTELLECTUAL PROPERTY OFFICE OF N.Z. 3 0 NOV 2005 RECEIVED 543853 Indole derivatives are used in a great variety of ways as pharmacodynamically active compounds and as building blocks for synthesis in pharmaceutical chemistry.
Documents WO 99/51224 A1 and WO 01/22954 A1 describe indol-3-yl derivatives which have an antineoplastic effect and which can be substituted by a large number of groups, including by 2-, 3-, 4- and 8-quinoline radicals or 2-, 3-, 4-, 5- and 6-pyridine radicals. A 10 2-methyl-8-quinolinyl group is mentioned in Example 60 as being a substituent on the amide group. However, no biological properties are mentioned.
WO 99/55696 Al describes substituted hydroxyindoles as 15 being inhibitors of phosphodiesterase 4. However, the compounds according to the invention are not reported to have any antineoplastic activity, nor is it suggested that they might have this activity.
WO 02/08225 Al describes 2-(lH-indol-3-yl)-2-oxo-acetamide derivatives which have an antineoplastic effect in relation to solid tumors. However, there is no mention of specific implementation examples containing quinoline, pyridopyrazine or indazolyl 25 radicals.
Patent specification WO 00/67802 describes indole-3-glyoxylamides which are substituted by relatively long-chain fatty acids as being potential antineoplastic agents. However, there is no mention of specific implementation examples containing quinoline, pyridopyrazine or indazolyl radicals. Nor are any biological data given with regard to such implementation examples.
The publication by W.-T. Li et al. (J. Med. Chem. 2003, 46, 1706 ff.) describes N-heterocyclic indolyl-glyoxylamides as being orally active compounds which possess antineoplastic activity. However, no 543853 information is provided as regards their mechanism of action.
Patent application WO 03/022280 A2 describes 5 3-glyoxylamideindoles and their use as drugs for antineoplastic treatment. Their general formula also includes 6-quinoline derivatives. In addition, two examples containing a 6-quinoline radical are mentioned as implementation examples and verified by means of 10 biological results. However, there is no mention of specific implementation examples containing pyridopyrazine or indazolyl radicals.
US application US 03/0181482 Al describes novel 15 indolylglyoxylamides. In this case, the compounds according to the invention are described as being antineoplastic agents possessing cytotoxic activity and as being angiogenesis inhibitors. In addition to this, a 6-quinoline derivative is shown as an implementation 20 example (compound 3; p. 10) and verified by means of antiproliferative data (see p. 19; Tables la and lb) and antiangiogenic properties (see p. 20). However, there is no mention of specific implementation examples containing pyridopyrazine or indazolyl radicals.
The Applicant's WO 02/10152 A2 already describes a second class of indole derivatives for treating tumors. In this document, the active compound N-(2-methyl-6-quinolyl)-[1-(4-chlorobenzyl)indol-3-yl]glyoxylamide, 30 inter alia, was tested for its antiproliferative effect on a variety of tumor cell lines.
Clinically tested compounds which either bind to the microtubules (paclitaxel and vincristine) or inhibit 35 topoisomerase II (doxorubicin, etoposide and mitoxantrone) are at present being successfully employed in cancer therapy against, inter alia, breast cancer, ovarian cancer, stomach cancer and lung cancer, and in Kaposi's sarcoma and in leukemias. However, 543853 their use is limited by the appearance of drug resistances and also by serious neurological, gastrointestinal, cardiovascular and hepatic side effects.
An object underlying the invention is now to make available cytotoxic substances which possess combined mechanisms of action and which are suitable for treating a large number of tumors, in particular when 10 active compound resistances exist against other drugs and when carcinomas are metastasizing. This object should be read disjunctively with the further object of at least providing a useful alternative to known cytotoxic substances.
In a first aspect, the present invention provides an indole derivative of the general formula I R7 v INTELLECTUAL PROPERTY OFFICE OF N.Z. 1 6 MAK 2009 formula I RECEIVED in which R: is a saturated, unsaturated or aromatic, substituted or unsubstituted (C2-Ci4)- heterocycle which contains one or more heteroatoms selected from the group N, 0 and S and which is directly linked to the amide nitrogen, with the: heterocycle preferably being (i) unsubstituted or substituted 5-, 6-, 7-quinolyl, (ii) unsubstituted or substituted 2-, 3-, 6-, 7- and 8-pyridopyrazinyl, 543853 (iii) unsubstituted or substituted 3-, 4-, 5-, 6- and 7-indazolyl, (iv) unsubstituted or substituted 2-, 3-, 4-, 5- and 6-pyridyl, (v) unsubstituted or substituted 3-, 4- and 5-isoxazolyl, (vi) unsubstituted or substituted 3-, 4- and 5-isothiazolyl, and the heterocycle, if substituted, is substituted by single or multiple replacement of one or more hydrogen atoms in the ring system with F, CI, Br, I, nitro, amino, Ci-Cg-alkyl, mono-(Ci-C6) -alkylamino, di-(Ci-Cs)- alkylamino, hydroxyl, Ci-C6-alkoxy, benzyloxy, carboxyl, (Ci-Cs) -alkoxycar-bonyl, (Ci-C6) -alkoxycarbonylamino or (Ci-Cg) -alkyl which is substituted, once or more than once, by fluorine, (Cg-Cio) -aryl and/or (C6-Ci0) -aryl- (Ci-C6) -alkyl at one or, where appropriate, different atoms by the same substituents or different substituents in case of multiple replacement, R1 is unsubstituted or substituted alkyl-aryl, R2: is (i) hydrogen, (ii) unsubstituted or substituted (Ci-Ce) alkyl, R3-R6: are (i) hydrogen (ii) unsubstituted or substituted (Ci-C6)- alkyl, (iii) unsubstituted or substituted (C3-C7)-cycloalkyl, (iv) amino, mono- (C1-C4) -alkylamino, di-40 (C1-C4)-alkylamino, 543853 _ 6 _ (v) halogen, (vi) (C1.-C4)-alkyl which is substituted by one or more fluorine atoms, preferably trifluoromethyl group, (Ci-C6)-alkyl, (viii) (Ci-Ce)-alkylcarbonyl, (ix) carboxyl, (C1-C4)-alkoxycarbonyl, carboxy-(C1-C6)-alkyl or (C1-C6)- alkoxycarbonyl-(Ci-C6)-alkyl, (x) hydroxyl, (xi) - (C1-C6) -alkoxy, (xii) aryl-(C1-C4)-alkoxy, preferably benzyl-oxy, (xiii) (Cx-C6)-alkoxycarbonylamino, (Ci-Ce)- alkoxycarbonylamino- (Ci-C6) -alkyl, R7: is (C1-C5) -alkylcarbonyl, preferably acetyl or propionyl, (Ci-C6>-alkoxycarbonyl, preferably methoxy- carbonyl, ethoxycarbonyl or propoxycarbonyl, and X, Y: are oxygen or sulfur, a tautomer, stereoisomer, including a diastereomer or enantiomer, thereof, and also a physiologically tolerated salt thereof.
When R is an unsubstituted or substituted 2-, 3-, 4-, 5- or 6-pyridyl group and R1-R6 have the abovementioned meaning, R7 must not, in this case, be an acetyl radical or a tert-butyloxycarbonyl group.
The invention furthermore relates to indole derivatives of the formula la in which 3 0 JUL 2009 I f% / Z££M1VED 543853 R: - 7 formula la is, directly linked to the amide nitrogen, (i) substituted 6-quinolyl, unsubstituted or substituted 7-quinolyl, where 2-methyl- 6-quinolyl is excluded and where, when X is a sulfur atom, R can also be unsubstituted 6-quinolyl. (ii) unsubstituted or substituted 2-, 3-, 6-, 7- and 8-pyridopyrazinyl, (iii) unsubstituted or substituted 3-, 4-, 5-, 6- and 7-indazolyl, and the heterocycle, if substituted, is substituted by single or multiple replacement of one or more hydrogen atoms in the ring system with F, CI, Br, I, nitro, amino, Ci-Cg-alkyl, mono-(Ci-Cg) -alkylamino, di-(Ci-Cg) - alkylamino, hydroxyl, Ci-Cg-alkoxy, benzyloxy, carboxyl, (Ci-C6)-alkoxycarbonyl, (Ci-Ce) -alkoxycarbonylamino or (Ci-Cg)-alkyl which is substituted, once or more than once, by fluorine, (Cg-Cio) -aryl and/or (Cg-Cio) -aryl- (Ci-Cg) -alkyl at one or, where appropriate, different atoms by the same substituents or different substituents in case of multiple replacement, Rl: is unsubstituted or substituted alkyl-aryl, 543853 intellectual property office of m.z. 3 0 JUL 2009 R2: is hydrogen RECEIVED R3-R6: are (xiv) hydrogen (xv) unsubstituted or substituted (Ci-C6)-alkyl, (xvi) unsubstituted or substituted (C3-C7)-cycloalkyl, (xvii) amino, mono- (C1-C4) -alkylamino, di- (C1-C4) -alkylamino, (xviii) halogen, (xix) {C1-C4)-alkyl which is substituted by one or more fluorine atoms, preferably trifluoromethyl group, (xx) cyano, straight-chain or branched cyano- (Ci-C6) -alkyl, (xxi) (Ci-C6) -alkylcarbonyl, (xxii) carboxyl, (Cj,-C4)-alkoxycarbonyl, car- boxy-(Ci-Cg)-alkyl or (Ci~C6)-alkoxy carbonyl- (Ci-Cg) -alkyl, (xxiii) - (Ci-C6) -alkoxy, (xxiv) aryl-(Ci~C4)-alkoxy, preferably benzyl-oxy, (xxv) (Ci~C6)-alkoxycarbonylamino, (Ci~C6)- alkoxycarbonylamino- (Ci-Cg) -alkyl, and R7: hydrogen X, Y: are oxygen or sulfur, a tautomer, stereoisomer, including a diastereomer or 35 enantiomer, thereof, and also a physiologically tolerated salt thereof.
The present invention is a further development of the invention which is described in WO 02/10152. It was 40 observed that the indole derivatives which were (followed by page 8a) 543853 - 8a - obtained by replacing the 2-methyl-6-quinolyl group with unsubstituted or substituted 2-, 3-, 6-, 7- and 8-pyridopyrazinyl or unsubstituted or substituted 3-, 4-, 5-, 6- and 7-indazolyl exhibit a superior 5 antiproliferative effect on a variety of tumor cell lines.
If was furthermore observed that the compounds according to the invention exert a powerful cytotoxic 10 effect which can be due to a very wide variety of different mechanisms. One mechanism of the compounds according to the invention, which is demonstrated in the invention, is based on inhibiting tubulin polymerization and on inhibiting topoisomerase II. This 15 leads to the arrest of tumorigenic cells in the G2M phase. In addition to this, the compounds according to the invention induce apoptosis.
It was furthermore observed that the compounds 20 according to the invention have a superior solubility in water and consequently also a superior oral bioavailability.
In addition, it was demonstrated that introducing an 25 acetyl radical as the R7 radical resulted in the compounds according to the invention having superior in-vivo activity while at the same time being better tolerated.
The substance class which is described in the invention should open up the possibility of obtaining antineoplastic medication which is lower, longer intellectual property office of n.z. 3 0 JUL 2009 RECEIVED (followed by page 9) 543853 lasting and better tolerated than can be achieved using the conventional cytostatic agents. In particular, it should be possible to circumvent the disadvantageous development of resistance, as is known to occur in the 5 case of many antineoplastic agents. The effect augmentation which is achieved using the indole derivatives according to the invention should make drug usage more efficient. In addition to this, it ought to be possible to extend the treatment to cases which are 10 resistant to therapy.
In a preferred embodiment, Rl is 4-chlorobenzyl, R2-R6 are hydrogen, R is heterocycle and R7 is alkylcarbonyl or alkoxycarbonyl in the indole derivative of the 15 formula I.
In another preferred embodiment, R is unsubstituted 5-quinolyl, unsubstituted 6-quinolyl or unsubstituted 7-quinolyl and R7 is acetyl or propionyl in the indole 20 derivative of the formula I.
In another preferred embodiment, R is unsubstituted 5-quinolyl, unsubstituted 6-quinolyl or unsubstituted 7-quinolyl and R7 is methoxycarbonyl, ethoxycarbonyl or 25 propionoxycarbonyl in the indole derivative of the formula I.
Some terms which are used in the description and the patent claims are defined below.
In connection with "heterocycle", the term is understood as meaning, insofar as not explicitly mentioned above, pyrrole, furan, thiophene, pyrazole, thiazole, indole, oxazole, imidazole, isothiazole, 35 isoxazole, 1, 2, 3-triazole, 1, 2, 4-triazole, 1,2,4-oxadiazole, 1,3,4-oxadiazole, 1, 2,5-thiadiazole, 1,3,4-thiadiazole, tetrazole, pyridine, pyrimidine, pyridazine, pyrazine, benzofuran, indazole, carbazole, benzoxazole, benzimidazole, benzothiazole, 543853 benzotriazole, quinoline, cinnoline, quinoxaline, quinazoline, phthalazine, pyridopyrazine, 1,2,3-triazine, 1,2,4-triazine, 1,3,5-triazine, purine, pteridine, acridine and phenanthridine.
Within the meaning of this invention, the expression "alkyl" encompasses acyclic saturated or unsaturated hydrocarbons which may be straight-chain or branched. In connection with "alkyl", the term "substituted" is 10 understood as being, within the meaning of this invention and insofar as not explicitly defined above, the replacement of a hydrogen radical with F, CI, Br, I, CN, NH2, NH-alkyl, NH-cycloalkyl, OH or 0-alkyl, where polysubstituted radicals are to be understood as 15 meaning those which are substituted more than once, e.g. twice or three times, either at different atoms or at identical atoms, for example three times at the same C atom, as in the case of -CF3 and -CH2CF3, or at different sites, as in the case of -CH (OH) -CH2-CH2-CHCI2. The polysubstitution can be effected using the same substituents or different substituents.
The expression "alkyl-aryl" means (Ci~Ce) -alkyl-(C6-C14) -25 aryl and preferably (C1-C6) -alkyl-C6~aryl.
In regard to "alkyl-aryl" and to "cycloalkyl", "substituted once or more than once" is understood, within the meaning of this invention and insofar as not explicitly mentioned above, as meaning the single or 30 multiple, for example twofold, threefold or fourfold replacement of one or more hydrogen atoms in the ring system with F, CI, Br, I, CN, NH2, NH-alkyl, OH, 0-alkyl, CF3, alkyl, (C6-Ci0) -aryl, (C6-C10) -aryl- (C]-C6) -alkyl and/or heterocyclyl at one or, where appropriate, 35 different atoms (with it being possible for a substituent, for its part, to be substituted, where appropriate). In this connection, the multiple replacement is effected using the same substituent or using different substituents. 543853 With regard to "heterocycle", "substituted once or more than once" is understood, within the meaning of this invention and insofar as not explicitly mentioned above, as being the single or multiple, e.g. twofold, 5 threefold or fourfold, replacement of one or more hydrogen atoms in the ring system with F, CI, Br, I, nitro, amino, Ci-C6-alkyl, preferably methyl, mono-(Ci-C6) -alkylamino, di- (Ci-Ce) -alkylamino, hydroxyl, Ci-C6-alkoxy, benzyloxy, carboxyl, (Ci-Ce)-alkoxycar-10 bonyl, (Ci~C6) -alkoxycarbonylamino or (Ci-C5)-alkyl which is substituted, once or more than once, by fluorine, preferably trifluoromethyl, (C6-Cio)-aryl and/or (C6-C10) -aryl- (Ci-Ce) -alkyl at one or, where appropriate, different atoms (with it being possible 15 for a substituent for its parts to be substituted, where appropriate). In this connection, the multiple replacement is effected using the same substituents or using different substituents.
Provided the compounds according to the invention of the general formula I possess at least one center of asymmetry, they can be present in the form of their racemates, in the form of the pure enantiomers and/or diastereomers or in the form of mixtures of these 25 enantiomers and/or diastereomers. The stereoisomers can be present in the mixtures in any arbitrary proportions. Provided this is possible, the compounds according to the invention can be present in the form of the tautomers.
Thus, methods which are known per se can be used, for example, to separate the compounds according to the invention of the general formula I which possess one or more chiral centers and occur as racemates into their 35 optical isomers, that is enantiomers or diastereomers. The separation can be effected by means of column separation on chiral phases or by means of recrystallization from an optically active solvent or using an optically active acid or base or by means of 543853 derivatizing with an optically active reagent, such as an optically active alcohol, and subsequently cleaving off the residue.
If they contain a sufficiently acidic group, such as the carboxyl group, the compounds according to the invention of the general formula I can be converted into their physiologically tolerated salts using inorganic and/or organic bases. Examples of suitable 10 inorganic bases are sodium hydroxide, potassium hydroxide and calcium hydroxide while examples of suitable organic bases are ethanolamine, diethanol-amine, triethanolamine, cyclohexylamine, dibenzylethyl-enediamine and lysine. In this connection, the 15 stoichiometry of the salts of the compounds according to the invention which are formed can be either an integral or a nonintegral multiple of one.
If they possess a sufficiently basic group, such as a 20 secondary or tertiary amine, the compounds according to the invention of the general formula I can be converted into salts using inorganic and organic acids. The pharmaceutically acceptable salts of the compounds according to the invention in accordance with the 25 general structure I are preferably formed with hydrochloric acid, hydrobromic acid, sulfuric acid, phosphoric acid, methanesulfonic acid, p-toluene-sulfonic acid, carbonic acid, formic acid, acetic acid, trifluoroacetic acid, oxalic acid, malonic acid, maleic 30 acid, succinic acid, tartaric acid, pyruvic acid, malic acid, embonic acid, mandelic acid, fumaric acid, lactic acid, citric acid, glutamic acid or aspartic acid. The salts which are formed are, inter alia, hydrochlorides, hydrobromides, sulfates, phosphates, methanesulfonates, 35 sulfoacetic acid, tosylates, carbonates, hydrogen carbonates, formates, acetates, triflates, oxalates, malonates, maleates, succinates, tartrates, malates, embonates, mandelates, fumarates, lactates, citrates and glutaminates. In this connection, the stoichiometry 543853 of the salts of the compounds according to the invention which are formed can be an integral or nonintegral multiple of one.
Preference is likewise given to solvates and, in particular, hydrates of the compounds I according to the invention which can be obtained, for example, by crystallization from a solvent or from aqueous solution. In this connection, one, two, three or any 10 arbitrary number of solvate or water molecules can combine with the compounds according to the invention to form solvates and hydrates.
It is known that chemical substances form solids which 15 are present in different states of order which are termed polymorphic forms or modifications. The different modifications of a polymorphic substance can differ greatly in their physical properties. The compounds according to the invention of the general 20 formula I can be present in different polymorphic forms, with it being possible for particular modifications to be metastable.
Both the compounds of the formula I and their salts are 25 biologically active. The compounds of the formula I can be administered in free form or as salts with physiologically tolerated acids or bases.
The compounds of the general formula can be 30 administered orally, rectally, via the buccal route (e.g. sublingually), parenterally (e.g. subcutaneously, intramuscularly, intradermally or intravenously) , topically or transdermally.
The invention furthermore relates to drugs having a content of at least one of the compounds of the formula I, or their salts with physiologically tolerated inorganic or organic acids, and, where appropriate, 543853 pharmaceutical^ utilizable carrier substances and/or diluents or auxiliary substances.
These drugs are used for treating tumor diseases, in 5 particular for treatment in connection with tumor diseases involving drug resistance against other active compounds and/or in connection with tumor diseases involving a metastasizing carcinoma.
Examples of suitable administration forms are tablets, sugar-coated tablets, capsules, solutions for infusion or ampoules, suppositories, plasters, powder preparations which can be used for inhalation, suspensions, creams and ointments.
The compounds according to the invention can also be dispersed in a microparticulate, e.g. nanoparticulate, composition.
In detail, the therapeutically valuable properties which have been found relate to the following advantages: • the compounds according to the invention are characterized by powerful antiproliferative properties; • the compounds according to the invention inhibit tubulin polymerization; ♦ the compounds according to the invention inhibit topoisomerase II; • the compounds according to the invention arrest dividing cells in the G2/M phase; • the compounds according to the invention induce apoptosis; • the compounds according to the invention are characterized by powerful antineoplastic activities in vivo while also being better tolerated; 543853 • the compounds according to the invention of the formula I are active in vitro on mdr-resistant cell lines, in contrast to paclitaxel, vincristine, doxorubicin or etoposide.
Greatest preference is given to compounds according to the general formula I which are included in the following selection: 2-[1-(4-chlorobenzyl)-lH-indol-3-yl]-2-oxo-N- pyrido[2, 3-b]pyrazin-7-ylacetamide (1) 2-[1-(4-chlorobenzyl)-lH-indol-3-yl]-N-(1H-indazol-5-yl)-2-oxoacetamide (4) N-{2-[1-(4-chlorobenzyl)-lH-indol-3-yl]-2-oxoacetyl}-N-quinolin-6-ylacetamide (2) methyl {2-[1-(4-chlorobenzyl)-lH-indol-3-yl]-2- oxoacetyl}quinolin-6-ylcarbamate (3) ethyl {2- [1- (4-chlorobenzyl) -lif-indol-3-yl] -2- oxoacetyl}quinolin-6-ylcarbamate (5) propyl {2- [1-(4-chlorobenzyl)-ltf-indol-3-yl]-2- oxoacetyl}quinolin-6-ylcarbamate (6) N— {2 —[1—(4-chlorobenzyl)-lH-indol-3-yl]-2-oxoacetyl)-N-quinolin-6-ylpropionamide (7) ethyl {2-[1-(4-chlorobenzyl)-lff-indol-3-yl]-2- oxoacetyl}pyridin-4-ylcarbamate (8) 2-[1-(4-chlorobenzyl)-lH-indol-3-yl]-N-quinolin-6-35 yl-2-thioxoacetamide (11) Compounds (1), (4) and (11) are compounds in which the radical R7 is hydrogen. Compounds (2), (3), (5) and (6) 543853 to (8) contain an alkylcarbonyl group of an alkoxycarbonyl group as the group R7.
The following compounds (9), (10), (12), (13), (14) and 5 (15) are compounds which were also investigated for the purposes of comparison. Compounds (9), (10), (14) and (15) are known from the prior art. Compound (9) is described in the Applicant's WO 02/10152, compound (10) is described in WO 03/022280, compound (13) is covered 10 by the claims in WO 02/08225 Al, and compounds (12) , (14) and (15) are covered by the claims in WO 99/51224 Al and WO 01/22954.
Compounds of the general formulae la and lb of the scheme can be obtained in accordance with the following Scheme 1: 2-[1-(4-chlorobenzyl)-lH-indol-3-yl]-N-(2-methylquinolin-6-yl)-2-oxoacetamide (9) 2-[1-(4-chlorobenzyl)-lH-indol-3-yl]-2-oxo-N-quinolin-6-ylacetamide (10) 2-[1-(4-chlorobenzyl)-lH-indol-3-yl]-2-oxo-N- quinolin-8-ylacetamide (12) 2-[1-(4-chlorobenzyl)-lH-indol-3-yl]-N- isoquinolin-5-yl-2-oxoacetamide (13) 2-[1-(4-chlorobenzyl)-lH-indol-3-yl]-2-oxo-N- pyridin-4-ylacetamide (14) 2-[1-(4-fluorobenzyl)-lH-indol-3-yl]-N-(2-methylquinolin-8-yl)-2-oxoacetamide (15) 543853 Scheme 1 o N I h 1st step NaH, DMSO CI r III IV 2nd step 1.(C0CI)2 2. h2n-Het HET 3rd step (a) RC(0)CI NaH or (RC0)20 DMAP, TEA 7 "HET lb la The compounds of the general formula Ic, in which X S, can be prepared in accordance with Scheme 2: Scheme 2 o h I ,n, a s het la 3rd step (b) -owo* '=\ / Toluene J "HET R Ic Compounds of the general formula Ic, in which Y = S, can be obtained using methods known from the literature 543853 (W.-D. Malmberg et al. Liebigs Ann. Chem. 10, 1983; 1649-1711).
The starting compounds II, III and IV can either be 5 obtained commercially or prepared using procedures which are known per se. The starting compounds II, III and IV are valuable intermediates for preparing the indole derivatives according to the invention of the formula I.
For the preparation of the starting compounds and target compounds, reference may be made, for example, to the following standard works of organic synthesis, the content of which is hereby intended to be 15 incorporated into the disclosure of the present application: • Houben-Weyl, Volume E 7a (Part 1) pp. 290-492, pp. 571-740 • Houben-Weyl, Volume E 7a (Part 2) pp. 119-156, pp. 205-686, pp. 157-204 • The monograph "Heterocyclic Compounds" (Elderfield) , Volume 1, pp. 119-207, pp. 397-616 25 Volume 3, pp. 1-274 Volume 6, pp. 101-135, pp. 234-323 • The monograph "Comprehensive Organic Chemistry" (S.D. Barton, W.D. Ollis) Volume 4, pp. 155-204, pp. 205-232, pp. 493-30 564 The skilled person is familiar, on account of his specialist knowledge, with the solvents and auxiliary agents, and reaction parameters, such as reaction 35 temperature and reaction duration, which are to be used, where appropriate.
The following compounds, whose inclusion in the survey below is evident from their respective chemical 543853 designations, were synthesized in accordance with these general directions for steps 1, 2 and 3, as based on synthesis Schemes 1 and 2. The compounds according to the invention were characterized analytically by means 5 of their melting points and/or by means of 1H NMR spectroscopy and/or mass spectroscopy.
The chemicals and solvents employed were either obtained commercially from the customary suppliers 10 (Acros, Avocado, Aldrich, Fluka, Lancaster, Maybridge, Merck, Sigma, TCI, etc.) or synthesized.
The invention will be explained in more detail with the aid of the following examples without being restricted 15 to them.
Examples Example 1 (Reaction in accordance with Scheme 1, 1st 20 step) : Preparation of 1-(4-chlorobenzyl)indole A solution of 5.86 g (0.05 mol) of indole in 25 ml of 25 DMSO is added to a mixture of 1.32 g of sodium hydride (0.055 mol, mineral oil suspension) in 50 ml of dimethyl sulfoxide. The resultant mixture is heated at 60°C for 1.3 hours; after that, it is allowed to cool down and 17.7 g (0.11 mol) of 4-chlorobenzyl chloride 30 are added dropwise. The solution is heated to 60°C and allowed to stand overnight; it is then poured into 200 ml of water while stirring. This mixture is extracted several times with a total of 75 ml of CH2CI2, after which the organic phase is dried with anhydrous 35 sodium sulfate and filtered and the filtrate is evaporated in vacuo.
Yield: 11.5 g (95% of theory) 543853 Example 2 (Reaction in accordance with the 2nd step of Scheme 1): 2- [1- (4-Chlorobenzyl)-lH-indol-3-yl]-2-oxo-N-pyrido-5 [2,3-b]pyrazin-7-ylacetamide (1) A solution of 10.2 g (10.7 mMol) of 1-(4-chlorobenzyl)-indole in 200 ml of ether is added dropwise, at 0°C and under nitrogen, to a solution of 1.12 ml of oxalyl 10 chloride in 50 ml of ether. The mixture is heated to reflux for 2 hrs. and the solvent is subsequently evaporated off. 30 ml of DMF are then added to the residue, after which 1.93 g (13.9 mMol) of potassium carbonate are added and the suspension is cooled down 15 to 0°C; a solution of 1.57 g (10.7 mMol) of amino component in 10 ml of DMF is then added dropwise. The reaction mixture is left to stir overnight at room temperature. It is finally stirred into ice water and the resulting precipitate is filtered off with suction. 20 The crude product which is obtained is chromatographed on 100 g of silica gel using n-heptane/ethyl acetate = 4:1 Yield: 3.23 g (68.0%) m.p.: 250 °C 1H-NMR (DMSO-D6) 6 = 11.56 (s, 1H) , 9.53 (d, 1H) , 9.12 (s, 1H), 9.09 (d, 1H) , 9.04 (s, 1H) , 8.32 (d, 1H) , 7.6 30 (d, 1H), 7.40 (d, 2H), 7.35 (m, 3H), 7.32 (m, 2H), 5.64 (s, 2H) ppm Example 3 (Reaction in accordance with the 3rd step (a) of Scheme 1): N-{2-[1-(4-Chlorobenzyl)-ltf-indol-3-yl]-2-oxoacetyl}-N-quinolin-6-ylacetamide (2) 543853 0.833 g (6.82 mMol) of DMAP, 1.38 g (13.6 mMol) of triethylamine and 13.9 g (136 mMol) of acetic anhydride are added, under nitrogen, to a stirred solution of 6.0 g (13.6 mMol) of 2-[1-(4-chlorobenzyl)-lH-indol-3-5 yl]-2-oxo-N-quinolin-6-ylacetamide in 60 ml of DMF. The reaction mixture is stirred at room temperature for 10 minutes and, after that, poured into 200 ml of ethyl acetate. After 300 ml of water have been added, the mixture is shaken in a separating funnel after which 10 the two phase separate. Precipitation begins after 20 minutes. The pale yellow crystals are filtered off and dried in vacuo at 60°C.
Yield: 4.04 g (61.5%) m.p.: 122.9°C *H-NMR (600 MHz, DMSO-d6) =9 .02 (d, IH) , 8.54 (s, IH), 8. 44 (d, IH) , 8.21 (d, IH) , 8. 17 (ct, IH) , 8.10 (m, IH), 7. 88 (m, IH) , 7.65 (m, IH) , 7. 58 (m, IH) , 7.44 (d, K n: CM 33 (d, 2H) , 7.28 (m, 2H) , . 60 (s, 2H) , 2. 15 (sf 3H) .
MS (ESI) m/z 482.1 (MH+) , (theor. 481.94) Example 4 (Reaction in accordance with the 3rd step (a) of Scheme 1): Methyl {2- [1-(4-chlorobenzyl)-lH-indol-3-yl]-2-oxo- acetyl}quinolin-6-ylcarbamate (3) 930.2 mg (27.3 mMol) of NaH (as a 60% strength dispersion in mineral oil) are added, under nitrogen, to a cooled, stirred solution of 10.0 g (22.7 mMol) of 35 2-[1-(4-chlorobenzyl)-lH-indol-3-yl]-2-oxo-N-quinolin- 6-ylacetamide in 500 ml of dry THF. The solution is stirred at 0°C until a yellow precipitate separates out and, after that, stirred for a further 15 minutes. After that, 2.58 g (27.3 mMol) of methyl chloroformate o (* «J o xJ w 543853 are added dropwise at a temperature below + 5°C. The reaction is monitored by thin layer chromatography (eluent: n-heptane/ethyl acetate 1/1 RF = 0.11). The reaction mixture is poured into water and the resulting 5 mixture is extracted with ethyl acetate; the organic phase is washed with a saturated solution of sodium chloride and dried over anhydrous MgS04. Evaporating off the solvent yields a crude product, which is purified by column chromatography (n-heptane/acetone 10 2/1) in order to give 3. Thin layer chromatography shows that 3 still contains slight impurities, which can be removed by stirring the crude 3 with acetone for 1 h. Filtration yields 3 as pale yellow crystals.
Yield: 3.0 g (26.5%) m.p.: 178.5°C 1H-NMR (600 MHz, DMSO-d6) 5 = 9.02 (d, IH) , 8.58 (s, 20 IH), 8.47 (d, IH), 8.17 (m, 3H), 7.84 (m, IH), 7.63 (m, 2H), 7.44 (d, 2H), 7.34 (m, 4H) , 5.60 (s, 2H) , 3.65 (s, 3H) .
MS (ESI) m/z 498.2 (MH+) , (theor. 497.94) Example 5 (Reaction in accordance with the 3rd step (b) of Scheme 2): Preparing 2-[1-(4-chlorobenzyl)-lH-indol-3-yl]-N- quinolin-6-yl-2-thioxoacetamide (11) 3.68 g (9.1 mMol) of 2,4-bis(4-methoxyphenyl)-1, 3-dithia-2,4-diphosphetane-2,4-disulfide are added, under nitrogen, to a suspension of 4.00 g (9.1 mMol) of 2—[1— 35 (4-chlorobenzyl)-lH-indol-3-yl]-2-oxo-N-quinolin-6- ylacetamide in 200 ml of toluene, after which the mixture is heated at 75°C for 3 h. The residue which has formed is filtered off in the hot from the reaction solution and subsequently washed with 100 ml of 543853 methylene chloride. The filtrate is concentrated in vacuo and the residue is chromatographed on flash silica gel (eluent: methylene chloride/methanol 99:1). The product fractions are filtered on flash silica gel 5 (eluent: n-heptane/ethyl acetate 1:1) after the solvent has been removed once more.
Yield: 0.46 g (11% of theory) ESI-MS: m/e = 456.1 (MH+) , (theor. 455. 97) 1H-NMR (DMSO-D6) 5 = 10.89 (s, IH) , 8.8 (s, IH) , 8.75 (s, IH), 8.55 (s, IH) , 8.12 (d, IH) , 8.35 (d, IH) , 8.0 (d, IH), 7.93 (d, IH), 7.63 (d, IH), 7.50 (m, IH), 7.4 15 (m, 3H) , 7.3 "(m, 3H) , 5.6 (s, 2H) ppm.
The following 'compounds of the formula I were simplified in analogy with the synthesis route in Scheme 1 and in accordance with Examples 2 and 3.
Example 6: 2-[1-(4-Chlorobenzyl)-lH-indol-3-yl]-N-(lH-indazol-S-yl) -2-oxoacetamide (4) m.p.: 203°C 1H-NMR (DMS0-D6) 5 = 13.02 (s, IH) , 10.7 (s, IH) , 9.04 (s, IH), 8.48 (s, IH), 8.42 (d, IH) , 8.06 (s, IH) , 7.73 30 (d, IH) , 7.6 (d, IH), 7.55 (d, IH) , 7.40 (d, 2H), 7.28-7.35 (m, 4H), 5.63 (s, 2H) ppm Example 7: Ethyl {2-[1-(4-chlorobenzyl)-lH-indol-3-yl]-2-oxo- acetyl}quinolin-6-ylcarbamate (5) m.p.: 199 °C 543853 XH NMR (600 MHz, DMSO-d6) 5 = 9.02 (m, IH) , 8.60 (s, IH) , 8.48 (d, IH) , 8.15 (m, 3H) , 7.83 (m, IH) , 7.63 (m, sH), 7.43 (d, 2H), 7.32 (m, 4H), 5.60 (s, 2H), 4.15 (q, 2H) , 0.95 (t, 3H) .
MS (ESI) m/z 514.2, 512.1 (MH+) , (theor. 511.97) Example 8: Propyl (2-[1-(4-chlorobenzyl)-lH-indol-3-yl]-2-oxo- m.p.: 164 °C 1H-NMR (600 MHz, DMSO-d6) 8 = 9.02 (m, IH) , 8.60 (s, IH), 8.48 (d, IH), 8.17 (m, 3H) , 7.84 (m, IH) , 7.63 (m, 2H), 7.43 (d, 2H), 7.33 (m, 4H), 5.61 (s, 2H), 4.03 (t, 2H) , 1.32 (m, 2H), 0.56 (t, 3H) .
Example 9: N-{2- [ 1-(4-chlorobenzyl)-lH-indol-3-yl]-2-oxoacetyl}-N-quinolin-6-ylpropionamide (7) XH NMR (600 MHz, DMSO-d6) = 9.03 (m, IH) , 8.52 (s, IH) , 8. 45 (d, IH), 8.23 (d, 2H) , 8.18 (d, IH) , 8.13 (m, IH) , 7. 88 (m, IH), 7.65 (m, IH) , 7.58 (m, IH) , 7.45 (d, 2H) , 7. (m, 4H), .59 (s, 2H) , 2 . 61 (q, 3H) , 0.88 (t, 3H) .
Example 10: Ethyl {2-[1- (4-chlorobenzyl)-lff-indol-3-yl]-2-oxo- acetyl}pyridin-4-ylcarbamate (8) m.p.: 62 °C XH NMR (500 MHz, DMSO-d6) 8 = 8.74 (m, 2H) , 8.52 (s, IH), 8.12 (m, IH), 7.60 (m, IH), 7.55 (m, 2H), 7.40 (m, 543853 2H), 7.30 (m, 4H) , 5.57 (s, 2H), 4.10 (q, 2H), 0.95 (t, 3H) .
Example 11 (Comparison substance): Preparation of 2-[1-(4-chlorobenzyl)-lH-indol-3-yl]-N-(2-methylquinolin-6-yl)-2-oxoacetamide (9) Yield: 14.8 g (77.3% of theory) m.p.: 182-185 °C 1H-NMR (CDC13) 5 = 9.58 (s, IH) , 9.12 (s, IH) , 8.5 (s, IH) , 8.41 (s/ IH), 8.05 (t, 2H) , 7.78 (d, IH) , 7.4 (dd, 15 IH), 7.32 (m, 4H), 7.26 (s, IH), 7.15 (d, IH), 5.38 (s, 2H), 2.73 (s, 3H) ppm 2-[1-(4-Chlorobenzyl)-lH-indol-3-yl]-2-oxo-N-quinolin-6-ylacetamide (10) m.p.: 200°C 1H-NMR (DMSO-De) 5 = 11.5 (s, IH) , 9.05 (s, IH) f 8.85 (s, IH), 8.66 (s, IH), 8.32 (d, 2H), 8.12 (d, IH), 8.03 (d, IH) , 7.63 (d, IH) , 7.53 (dd, IH) , 7.42 (d, 2H) , 7.30-7.38 (m, 4H), 5.63 (s, 2H) ppm Example 13 (Comparison substance): 2- [1- (4-Chlorobenzyl) -lH-indol-3-yl] -2-oxo-2V-quinolin-8-ylacetamide (12) m.p.: 178 °C 543853 Example 14 (Comparison substance): 2- [1-(4-Chlorobenzyl)-lH-indol-3-yl]-N-isoquinolin-5-yl-2-oxoacetamide (13) m.p.: 239-241°C Example 15 (Comparison substance): 2- [1- (4-Chlorobenzyl) -lff-indol-3-yl] -2-oxo-AT-pyridin-4-ylacetamide (14) m.p.: 264 °C Example 16 (Comparison substance): 2-[1-(4-Fluorobenzyl)-lH-indol-3-yl]-N- (2-methylquino-lin-8-yl)-2-oxoacetamide (15) m.p.: 200-202°C Biological effects of the compounds according -bo the invention Carrying out in-vitro and in-vivo tests on selected tumor models showed the presence of the following pharmacological activities.
Example 17: Antiproliferative effect on various tumor 30 cell lines The antiproliferative activity of substances 1, 2, 4, 9, 11, 12, 13 and 15 was investigated in a proliferation test performed on established tumor cell 35 lines (D.A. Scuderio et al. Cancer Res. 1988, 48, 4827-4833) . The test which is used determines the cellular dehydrogenase activity and makes it possible to determine cell viability and determine cell number 543853 indirectly. The cell lines which are used are the human cervical carcinoma cell line KB/HeLa (ATCC CCL17), the ovarian adenocarcinoma cell line SKOV-3 (ATCC HTB77), the human glioblastoma cell line SF-268 (NCI 503138) 5 and the lung carcinoma cell' line NCI-H460 (NCI 503473) .
XTT proliferation assay, EC50 in Hg/ml Example KB/HeLa SKOV3 SF-268 NCI-H460 1 0.045 0.029 0.042 0.046 2 0.202 0.123 0.166 0 .168 4 0. 335 0.144 >3.16 0.233 11 0. 036 0.029 0.036 0.057 9 (C) 0. 183 0.174 0.261 0.344 12 (C) >3.16 >3.16 >3.16 >3.16 13 (C) >3.16 >3.16 >3.16 >3.16 (C) >3.16 n.d. >3.16 n.d.
C = Comparison substance; n.d.: not determined Table 1: Ability of the substances according to the invention to inhibit proliferation in the XTT cytotoxicity test carried out on human tumor cell lines The results show that implementation examples 1, 2, 4 and 11 are very potent inhibitors of the proliferation of selected tumor cell lines.
Example 18: Antiproliferative effect on MDR tumor cell 20 lines For further characterization, substances 1, 2, 4 and 11 were investigated with regard to their effect on multidrug-resistance cell lines as compared with that 25 on nonresistant wild-type cell lines.
The cell lines which were investigated are the murine cell line L1210, the acute myeloid leukemia cell line LT12 and the resistant lines L1210/mdr and LT12/mdr. 543853 The murine cell line P388 (methylcholanthrene-induced lymphoid neoplasm) and doxorubicin-resistant P388 were also included as test systems.
The results are summarized in Table 2 below: XTT proliferation assay, EC50 in ng/ml Example LT12 LT12mdr Xil210 Iil210VCR P388 P388ADR l 0.015 0.017 0.018 0.021 0.012 0 .019 2 0.225 0.272 0.206 0.558 0.224 0.215 4 0.084 0.093 0.246 0.241 0.175 0.231 11 0.023 0.054 0.052 0.067 0.018 0.051 Paclitaxel 0.005 0.34 0.048 >3.16 0.035 >3.16 Vincristine 0.002 0.134 0.015 >3.16 0.004 0.93 Doxorubicin 0.029 >3.16 0.269 >3.16 0.204 >3.16 Hi toxantrone 0.006 3.1 0.09 2.1 0.053 0. 608 Etoposide 0.094 >3.6 0.269 >3.16 0.202 >3.16 C = Comparison example Table 2: Inhibitory effect, of the substances on human tumor cell lines in the XTT proliferation test.
Substances 1, 2, 4 and 11 exhibit a very potent inhibitory effect on all the cell lines tested, while the classic substances which have a tubulin-inhibiting effect, such as paclitaxel or vincristine, and the 20 topoisomerase II inhibitors (doxorubicin, mitoxantrone and etoposide) can be seen to have an effect on the MDRl-resistant cell lines which is at least greatly reduced. 543853 Example 19: Inhibition of tubulin polymerization Substances 1, 4, 9, 11, 12, 13 and 15 were tested for their ability to inhibit the polymerization of bovine 5 tubulin in an in-vitro test (D.M. Bollag et al. Cancer Res. 1995, 55, 2325-2333). This test uses tubulin which has been purified by cycles of polymerization and depolymerization and which is caused to polymerize by adding GTP and heating it. Table 3 gives the EC5o values 10 causing inhibition of the polymerization of tubulin containing 30% associated proteins (MPAs).
Example Inhibition of tubulin polymerization, EC50 in jig/ml 1 0.71 4 1.26 11 0. 97 9 (C) 1.16 12 (C> >10 |aM 13 (C) >10 juM (C> >10 nM Vincristine 0.35 C = Comparison example Table 3: Inhibition of tubulin polymerization. Mean values of two independent experiments.
The results (see Table 3) show that substances 1, 4, 9 20 and 11 have a very potent inhibitory effect on tubulin polymerization while compounds 12, 13 and 15 do not exert any effect.
Example 20: Inhibition of topoisomerase II The ability of substance 1 to inhibit topoisomerase II was examined in two different in-vitro tests. 543853 • kDNA assay for testing topoisomerase II activity: In this assay, which was described by P. Arimondo (Anti-Cancer Drug Design 2000, 15(6}, 413-421), kDNA is 5 treated with human DNA topoisomerase II in the absence or presence of the test compounds. In the assay, compound 1 according to the invention was tested at three different concentrations (100, 31.6 and 10 p.M) . A positive control and the reference compounds 10 m-amsacrine (m-amsa), paclitaxel (Taxol) and vincristine, with the concentration in each case being 100 nM, were used for comparison.
Implementation of the assay: 2 jiL of lOx assay buffer, 1 |iL of kDNA (200 ng) , 0.5 p.L of human topoisomerase II (1 unit) and 15.5 p.L of H20 are added by pipette to 1 nL of initially introduced test substance (20 times concentrated in 100% DMSO) and 20 the reagents are mixed.
The reaction assay samples are placed in a heating block which has been preheated to 37°C and incubated at 37°C for 10 min. The incubation is stopped after adding 25 4 jiL of 5x Stop kuffer ancj substance is subsequently extracted with CIA. After that, 20 faL of the supernatant are loaded onto a 1% agarose gel containing 0.25 |ag of ethidium bromide/mL and separated at 100 V for 1 h. Finally, the gel is photographed 30 under CJV excitation (see Figure 1) . The inhibition of the decatenation of kDNA is quantified using the GelPro® Analyzer Software (see Figure 2). • pRYG relaxation assay for testing topoisomerase II 35 activity: This relaxation assay was used to further demonstrate the inhibitory properties of the compounds according to the invention on topoisomerase II. In the assay, the 543853 compound 1 according to the invention was tested at three different concentrations (100, 31.6 and 10 |uM) . The reference compounds m-amsacrine, paclitaxel (Taxol) and vincristine were used, at concentrations of 316 and 5 100 |^M, for comparison.
The assay is carried out as follows: 2 p.L of lOx assay buffer, 0.5 pL of pRYG DNA (125 ng) , 10 0.5 (iL of human topoisomerase II (1 unit) and 16 p.L of H2O are added by pipette to 1 of initially introduced test substance (20 times concentrated in 100% DMSO) and the reagents are mixed. The reaction assay samples are placed in a heating block which has 15 been preheated to 37°C and incubated at 37°C for 30 min. The incubation is stopped after adding 4 p.L of 5x Stop buffer. After that, 10 fiL of the assay sample are loaded onto a 1.2% agarose gel containing 0.25 (ig of ethidium bromide/mL and separated at 100 V for 2.5 h. 20 Finally, the gel is photographed under UV excitation (see Figure 3) . The inhibition of pRYG relaxation is quantified using the GelPro Analyzer Software (see Figure 4) .
Taken overall, it can be stated that compound 1 according to the invention was shown to significantly inhibit topoisomerase II in both assays. The results obtained with compound 1 are comparable with the inhibition values obtained with the topoisomerase II 30 inhibitor m-amsacrine. As expected, neither paclitaxel nor vincristine was observed to have any inhibitory effects in the two assays.
Example 21: Cell cycle analysis The cell cycle comprises the progress of the cell from one cell generation to the next. 543853 During the resting phase (GO) and presynthetic phase (Gl) , the cell possesses a diploid set of chromosomes (2c) . In the synthetic phase (S), the quantity of DNA is increased by replication. The S phase ends when the 5 premitotic phase (G2M), in which the cell possesses a reduplicated complement of chromosomes (4c) and a doubled content of DNA, is reached. In the subsequent mitotic phase (M) , which is of short duration, the reduplicated chromosomes are uniformly apportioned 10 between two daughter cells, which then in each case once again possess a diploid content of DNA and are in the G01 phase, which means that the cell cycle can begin afresh.
For the cell cycle analysis, KB/HeLa cells were treated with different concentrations of the test substances (0.1-1000 nM) at 37°C for 24 hours.
The percentage of cells arrested in the G2/M phase of 20 the cell cycle after having been treated with reference substances or selected test substances is shown in Table 4 below. The results were analyzed using special analytical software (ModFit™) .
Example EC50 in nM (50% of cells in G2/M) 1 .2 2 125.3 4 252 11 41.8 14 (C) >1000 paclitaxel 26.9 .3 Table 4: Concentration required for inhibiting 50% of the cells in the G2/M phase.
Compounds 1, 2, 4 and 11 according to the invention exhibit activities which are comparable to those of the reference compounds paclitaxel and mitoxantrone. 543853 Example 22: Demonstration of apoptosis CDDplus nucleosome ELISA test: Nuclear fragmentation is a late consequence of apoptotic processes. The changes which can be observed in this connection can be attributed to DNA strands being cleaved by endonucleases and the fragmentation into nucleosome particles which results therefrom.
The coc)Plus nucleosome ELISA test described by Roche Molecular Biochemicals was used for demonstrating the nucleosome particles.
For this, the effects of compounds 1 and 2 on the U-937 15 cell line were investigated at different concentrations (1 nM-10 (iM; 24 h of treatment) . (See Figure 5 and Figure 6).
In this test, it was possible to observe a 20 concentration-dependent increase of nucleosomes in the cell lysate for compounds 1 and 2. It was not possible to demonstrate any significant increase in the cell culture supernatant, which, is evidence in support of apoptotic cell death occurring after treatment with 1 25 and 2.
Example 23: Demonstration of the saturation solubility in water of the compounds according to the invention The saturation solubility in water of compounds 1, 2, 10 and 14 was determined as described below. A maximum of 1% DMSO was added for the purpose of solubilizing the substances and improving the wetting of the samples. An HPLC-UV method was used for checking the 35 content. The results are summarized in Table 5 below: 543853 Name of compound Saturation solubility in water [|ig/ml ] 1 .0 2 28. 5 (C) 0.038 14 (C) 0. 35 Table 5: Saturation solubilities of compounds 1, 2, 10 and 14 Compounds 1 and 2 according to the invention differ from compounds 10 and 14 in being more soluble in water.
Example 24: In-vivo activity The in-vivo activity and tolerability of compound 2 according to the invention, as compared with those of substances 10 and 14, were examined in a human 15 xenograft model (melanoma, MEXF-462). The results are summarized in Table 6 below: In-vivo activities of compounds 2, 10 and 14 (melanoma; MEXF4 62) Compound Dose [mg/kg] Administration Deaths n1 Optimum T/C% (day) 2 80 p. o. 0/6 mice 0.0% (18) complete remission in the case of all 6 animals (C) 70 p.o. /6 mice dead 2.3% (7) (C) 55 P.O. 2/6 mice dead 0.8% (14) 14 (C) 32 p.o. 3/5 mice dead 14.6% (7) 14 (C) 16 p.o. 3/5 mice 0.7% (18) dead 1) Number of dead animals as compared with the total number Table 6: In-vivo activities of compounds 2, 10 and 14 (melanoma; MEXF4 62) In this xenograft model, compound 2 was observed to produce complete remission of the tumors in the treated 10 animals while also being very well tolerated (no deaths). While comparable antineoplastic effects were observed in the case of compounds 10 and 14, these latter compounds were less well tolerated.
Example 25: In-vivo activity The in-vivo activity and tolerability of compound 2 according to the invention, as compared with those of substance 10, were examined in another human xenograft 20 model (mammary gland, MAXF857). ' The results are shown in the following table: Effect of 2 and 10 on the mammary cancer MAXF857 Compound Dose Adminis Deaths Optimum T/C [mg/kg] tration n1 % (day) 2 80 p.o. 0/6 mice 9.6% (10) (C) 40 P.O. 2/6 mice dead 6.5% (10) 1) Number of dead animals as compared with the total number Table 7: In-vivo activities of compounds 2 and 10 30 (mammary gland; MAXF857) 543853 While compounds 2 and 10 were observed to have comparable antineoplastic effects, substance 10 (2/6 mice dead) is substantially less well tolerated than 2.

Claims (19)

543853 - 37 -Patent claims
1. An indole derivative of the general formula I R7 R6 r -N \ R3 R1 formula I 10 15 20 25 30 wherein R: is a saturated, unsaturated or aromatic, substituted or unsubstituted (C2-C14)-heterocycle which contains one or more heteroatoms selected from the group N, 0 and S and is linked directly to the amide nitrogen, and the heterocycle, if substituted, is substituted by single or multiple replacement of one or more hydrogen atoms in the ring system with F, CI, Br, I, nitro, amino, Ci-Cg-alkyl, mono-(Ci-Cg) -alkylamino, di- (Ci-Cg) -alkylamino, hydroxyl, Ci-C6~alkoxy, benzyloxy, carboxyl, (Ci-Cg)-alkoxycarbonyl, (Ci-Cg)-alkoxycarbonylamino or (Ci-Cg) -alkyl which is substituted, once or more than once, by fluorine, (Cg-Cio) -aryl and/or (C6-Cio) -aryl-(Ci-C6)-alkyl at one or, where appropriate, different atoms by the same substituents or intellectual property office of n.z. 3 0 JUL 2009 received 543853 - 38 - different substituents in case of multiple replacement, Rl: is unsubstituted or substituted alkyl-aryl, 5 R2: is (i) hydrogen, (ii) unsubstituted or substituted (Ci-Cg) -alkyl, 10 R3-R6: are (i) hydrogen (ii) unsubstituted or substituted (Ci-C$) -alkyl, 15 (iii) unsubstituted or substituted (C3-C7) -cycloalkyl, (iv) amino, mono-(C1-C4) -alkylamino, di-(C1-C4) -alkylamino, (v) halogen, 20 (vi) (C1-C4)-alkyl which is substituted by one or more fluorine atoms, preferably trifluoromethyl group, (vii) cyano, straight-chain or branched cyano- (Ci-Cg) -alkyl, 25 (viii) (Ci-C6)-alkylcarbonyl, (ix) carboxyl, (Cx-C^ -alkoxycarbonyl, carboxy-(C1-C6)-alkyl or (Ci-C$)-alkoxycarbonyl- (Ci-Ce) -alkyl, (x) hydroxyl, 30 (xi) - (Ci-C6)-alkoxy, (xii) aryl-(C1-C4)-alkoxy, preferably benzyloxy, (xiii) (Ci-C6)-alkoxycarbonylamino, (Ci-C6) -alkoxycarbonylamino- (Ci-C6) - 35 alkyl, R7: is intellectual property office of n.z. 3 0 JUL 2009 RECEIVED - 39 - (Ci-C6) -alkylcarbonyl or (Ci-Ce) -alkoxycarbonyl and X, Y: are oxygen or sulfur, with the proviso that, when R is an unsubstituted or substituted 2-, 3-, 4-, 5- or 6-pyridyl group and R1-R6 have the abovementioned meaning, R7 is not an acetyl radical or a tert-butyloxycarbonyl group; a tautomer, stereoisomer, including a diastereomer or enantiomer, thereof, and also a physiologically tolerated salt thereof.
An indole derivative as claimed in claim 1, wherein R is (i) unsubstituted or substituted 5-, 6-, 7-quinolyl; (ii) unsubstituted or substituted 2-, 3-, 6-, 7-and 8-pyridopyrazinyl, (iii) unsubstituted or substituted 3-, 4-, 5-, 6-and 7-indazolyl; (iv) unsubstituted or substituted 2-, 3-, 4-, 5-and 6-pyridyl; (v) unsubstituted or substituted 3-, 4- and 5-isoxazolyl; or (vi) unsubstituted or substituted 3-, 4- and 5-isothiazolyl.
An indole derivative as claimed in claim 1 or 2, characterized in that R7 is methoxycarbonyl, ethoxycarbonyl, propoxycarbonyl, acetyl or propionyl.
An indole derivative as claimed in any one of claims 1 to 3, wherein the compound of the general INTELLECTUAL PROPERTY office of n.2. 3 0 JUL 2009 RECEIVED - 40 - formula I is selected from the following group of compounds: N-{2-[1-(4-chlorobenzyl)-lH-indol-3-yl]-2-oxoacetyl}-N-quinolin-6-ylacetamide (2); methyl {2- [1- (4-chlorobenzyl) -lif-indol-3-yl] -2-oxoacetyl}quinolin-6-ylcarbamate (3); ethyl { 2 - [1- (4-chlorobenzyl) -l.ff-indol-3-yl] -2- oxoacetyl}quinolin-6-ylcarbamate (5); propyl {2-[1-(4-chlorobenzyl)-l.ff-indol-3-yl]-2-oxoacetyl}quinolin-6-ylcarbamate (6); JV— { 2 — [ 1 — (4-chlorobenzyl) -lH-indol-3-yl] -2-oxoacetyl}-W-quinolin-6-ylpropionamide (7); or ethyl {2 —[1—(4-chlorobenzyl)-lff-indol-3-yl] -2- oxoacetyl}pyridin-4-ylcarbamate (8). formula la wherein INTELLECTUAL PROPERTY OFFICE OF N.Z. 3 0 JUL 2009 RECEIVED 543853 10 25 - 41 - (i) substituted 6-quinolyl, unsubstituted or substituted 7-quinolyl, where 2-methyl-6-quinolyl is excluded and where, when X is a sulfur atom, R can also be unsubstituted 6-quinolyl. (ii) unsubstituted or substituted 2-, 3-, 6-, 7- and 8-pyridopyrazinyl, (iii) unsubstituted or substituted 3-, 4-, 5-, 6- and 7-indazolyl, and the heterocycles, if substituted, are substituted by single or multiple replacement of one or more hydrogen atoms in the ring system with F, CI, Br, I, nitro, amino, Ci-C6-15 alkyl, mono-(Ci-C5)-alkylamino, di-(C3.-C6)- alkylamino, hydroxyl, Ci-Cg-alkoxy, benzyloxy, carboxyl, (Ci-C6) -alkoxycarbonyl, (Ci-C6)-alkoxycarbonylamino or (Ci-Ce) -alkyl which is substituted, once or more than once, by 20 fluorine, (C6-Cio) -aryl and/or (C6-Ci0) -aryl- (Ci-Ce) -alkyl at one or, where appropriate, different atoms by the same substituents or different substituents in case of multiple replacement, R1: is unsubstituted or substituted alkyl-aryl, R2: is hydrogen, 30 35 R3-R6: are (i) (ii) (iii) (iv) (v) substituted substituted hydrogen unsubstituted or (C.i-C6) -alkyl, unsubstituted or (c3-c7) -cycloalkyl, amino, mono-(C1-c4)-alkylamino, (C1-C4) -alkylamino, halogen, di- IINTELLECTUAL property office of w.z. 3 0 JUL 2009 RECEIVEDl - 42 - (vi) (C1-C4) -alkyl which is substituted by one or more fluorine atoms, preferably trifluoromethyl group, (vii) cyano, straight-chain or branched cyano- (Ci-Cg) -alkyl, (viii) (Ci-C6)-alkylcarbonyl, (ix) carboxyl, (C1-C4)-alkoxycarbonyl, carboxy-(C1-C6)-alkyl or (Ci-Cg)-alkoxycarbonyl- (Ci~C6) -alkyl, (x) - (Ci-C6) -alkoxy, (xi) aryl-(C1-C4)-alkoxy, preferably benzyloxy, (xii) (Ci-Ce)-alkoxycarbonylamino, (Ci-C6) -alkoxycarbonylamino- (C!-C6) -alkyl, and R7: hydrogen and X, Y: are oxygen or sulfur, a tautomer, stereoisomer, including a diastereomer or enantiomer, thereof, and also a physiologically tolerated salt thereof.
An indole derivative as claimed in claim 5, wherein the compound of the general formula I is selected from the following group of compounds: 2-[1-(4-chlorobenzyl)-lH-indol-3-yl]-N-quinolin-6-yl-2-thioxoacetamide (11); 2-[1-(4-chlorobenzyl)-lH-indol-3-yl]-2-oxo-N-pyrido[2,3-b]pyrazin-7-ylacetamide (1); or INTELLECTUAL PROPERTY OFFICE OF N Z 3 0 JUL 2009 RECEIVED 543853 7. 5 8. 10 9. 15 10. 20 25 11. 12. 30 13. 35 14. - 43 - 2-[1-(4-chlorobenzyl)-lH-indol-3-yl]-N-(1H-indazol-5-yl)-2-oxoacetamide (4).
An indole derivative as claimed in any one of claims 1 to 6, wherein Rl is 4-chlorobenzyl, R2-R6 are hydrogen and X, Y are oxygen or sulfur.
A drug which comprises at least one of the indole derivatives as claimed in any one of claims 1 to 7.
A drug as claimed in claim 8 which comprises the indole derivative in a microparticulate or nanoparticulate composition.
A drug as claimed in claim 8 or 9 which comprises the indole derivative and a pharmaceutically utilizable carrier and/or diluent and auxiliary substance in the form of tablets, sugar-coated tablets, capsules, solutions for infusion or ampoules, suppositories, plasters, powder preparations optionally adapted for inhalation, suspensions, creams and ointments.
The use of the indole derivatives as claimed in any one of claims 1 to 6 for producing a drug for treating tumor diseases.
The use as claimed in claim 11, wherein the tumor disease involves drug resistance against other active compounds.
The use as claimed in claim 11, wherein the tumor diseases involves a metastasizing carcinoma.
The indole derivative as claimed in claim 1 or 5, substantially as herein described with reference to any one of the Examples thereof.
I INTELLECTUAL PROPERTY office of n.z. 3 0 JUL 2009 R EC EIV E [ 543853 - 44 -
15. The indole derivative as claimed in any one of claims 1 to 7, substantially as herein described. 5
16. The drug as claimed in claim 8, substantially as herein described with reference to any one of Examples 17 to 25 and/or any one of the Figures.
17, The drug as claimed in any one of claims 8 to 10, 10 substantially as herein described.
18. The use as claimed in claim 11, substantially as herein described with reference to any one of Examples 17 to 2 5 and/or any one of the Figures. 15
19. The use as claimed in any one of claims 11 to 13, substantially as herein described. INTELLECTUAL PROPERTY OFFICE OF N Z 3 0 JUL 2009 RECEIVED
NZ543853A 2003-06-05 2004-05-25 Indole derivatives with apoptosis-inducing effect NZ543853A (en)

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EP04011598A EP1595878A1 (en) 2004-05-15 2004-05-15 Indole derivatives with apoptosis inducing activity
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EA018724B1 (en) * 2006-08-07 2013-10-30 Айронвуд Фармасьютикалз, Инк. Indole compounds
WO2008066807A1 (en) * 2006-11-28 2008-06-05 Ziopharm Oncology, Inc. Use of indolyl-3-glyoxylic acid derivatives including indibulin, alone or in combination with further agents for treating cancer
EP2349259B1 (en) * 2008-10-16 2015-12-23 Array Biopharma, Inc. Inhibitors of mitosis for increasing apoptosis in therapy
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