<div class="application article clearfix" id="description">
<p class="printTableText" lang="en">51763A <br><br>
WO 01/45509 PCT/US00/34605 <br><br>
COMPOSITIONS AND METHODS FOR L-NUCLEOSIDES, L-NUCLEOTIDES, AND <br><br>
THEIR ANALOGS <br><br>
This application claims the benefit of U.S. provisional patent application 60/173,446, filed 12/29/1999, U.S. provisional patent application 60/172,097, filed 12/23/1999, U.S. <br><br>
5 provisional parent application 60/175,111, filed 01/06/2000, U.S. provisional patent application 60/190,758, filed 3/20/2000, U.S. provisional patent application 60/226,947, filed 8/22/2000, U.S. provisional patent application 60/226,875, filed 8/22/2000, U.S. provisional patent application 60/233,821, filed 9/19/2000, U.S. provisional patent application 60/233,823, filed 9/19/2000, U.S. provisional patent application 60/233,548, filed 9/19/2000, U.S. provisional 10 patent application 60/233,822, filed 9/19/2000, and U.S. provisional patent application 60/235,465, filed 9/26/2000, all of which are incorporated herein by reference. <br><br>
Field of The Invention <br><br>
The field of the invention is pharmaceutical compositions and uses thereof. <br><br>
Background of The Invention <br><br>
15 There are numerous challenges to a person's health, many of which result from infection or accumulation of toxins in a vital organ, which may further result in an adverse reaction of the immune system towards the infected organ. For example, an infection with the hepatitis C virus (HCV) frequently leads to a persistent inflammatory viral infection in which the organ inflammation may not be immediately attributable to the HCV virus, but rather to an infection 20 induced imbalance in the immune response. <br><br>
Most known treatments of viral infections may generally be characterized as either direct antiviral treatment or indirect antiviral treatment. In direct antiviral treatment, the virus is targeted with an appropriate direct antiviral drug. For example, patients infected with the HIV virus typically receive a cocktail of drugs to block the virus propagation, and various classes for 25 direct antiviral treatment are known in the art. For example, some direct antiviral drugs block the reverse transcriptase. Reverse transcriptase (RT) inhibitors are typically nucleoside analogs such as AZT, 3TC, or ddl. Alternatively, non-nucleoside RT inhibitors, including quercetin may be used. In vitro, RT inhibitors are typically potent antiviral drugs. However, in vivo, and especially during a period of relatively high rate of viral replication, the generation of RT inhibitor resistant 30 virus mutants are problematic. <br><br>
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WO 01/45509 PCT/US00/34605 <br><br>
Other direct antiviral drugs block or interfere with the virus protein processing, and are commonly known as protease inhibitors. Protease inhibitors are typically highly specific towards the viruses' proteolytic enzymes. However, due to their mostly hydrophobic nature, administration at desirable concentrations tends to be problematic. Moreover, development of 5 cross-resistance and severe side effects frequently compound the difficulties arising from the use protease inhibitors. In order to reduce the development of multi-drug resistant virus strains, mixtures ofRT inhibitors and protease inhibitors maybe prescribed. Although such mixtures are presently employed relatively successfully, the relatively high occurrence of adverse side effects and the potential of generating multi-drug resistant virus strains persist. <br><br>
10 In indirect antiviral treatment, the immune response to a viral challenge may be modulated. For example, immunosuppressive drugs may be employed to reduce the inflammatory condition associated with the viral infection, and various immunosuppressing drugs are known in the art. Among other immunosuppressive drugs, cyclosporin A is known as a potent immunosuppressor and is frequently used to repress tissue rejection after organ 15 transplantation. However, the use of cyclosporin A tends to be problematic due to its general immunosuppressing effect, making the patient more prone to new infectious diseases. Furthermore, long-term administration of cyclosporin A is frequently associated with severe side effects, including hirsutism and gingival hyperplasia. Moreover, the bioavailability of cyclosporin A is at least in part dependent on bile, which may pose additional problems in a 20 hepatitis infection. <br><br>
To overcome at least some of the problems associated with cyclosporin A, Tacrolimus (FK506) may be employed as an immunosuppressing drug. For example, Tacrolimus has found recognition in the treatment of facial atopic dermatitis. Topical administration of the immuno suppressant resulted in significant improvement in 95% of all treated patients [Alaiti, S. et al. 25 Tacrolimus (FK506) ointment for atopic dermatitis: A phase I study in adults and children. J Am Acad Dermatol 1998; 38(1): 69-76], Furthermore, Tacrolimus appeared not to permeate through the skin barrier, thereby eliminating problems associated with systemic administration. <br><br>
Although generally well tolerated, treatment with Tacrolimus without generally compromising immunity is limited to topical administration. When systemically administered over prolonged 30 periods, Tacrolimus frequently leads to lymphoproliferative disorders and cardiomyopathy. <br><br>
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Attorney Docket No.: 330.97-PCT <br><br>
Many known immunosuppressive drugs provide some relief for inflammatory conditions. However, the effects are not organ specific when systemically administered. Consequently, immunity towards exogenous and endogenous challenges such as bacterial and viral infections, neoplastic or malignant cells, etc. is systemically reduced. Thus, the window of a usable 5 concentration of immunosuppressive drugs is defined by the maximum concentration that will not entirely compromise a patient's immune system, and the minimum concentration that will provide at least some desirable effect. <br><br>
Although various compounds and methods for treatment of infectious and inflammatory diseases are known in the art, all or almost all of them suffer from one or more disadvantages. <br><br>
10 Therefore, there is a need to provide improved methods and compositions for treatment of those conditions. <br><br>
It is an object of the present invention to go some way towards fulfilling this need and/or to provide the public with a useful choice. <br><br>
Summary of the Invention <br><br>
15 The present invention is directed to compositions comprising a nucleoside and/or nucleotide drug or its analog which may be administered to a subject in a concentration or dosage effective to achieve a desired pharmacological or physiological effect. <br><br>
In one aspect of the inventive subject matter, contemplated compounds have a structure according to formula I, wherein R is H, a PO32", (P03)23\ or (P03)34"group. <br><br>
20 <br><br>
O-R <br><br>
HO OH Formula 1 <br><br>
Contemplated compounds are optionally further modified with a modifying group that is 25 covalently coupled to the carbonyl atom, and it is further contemplated that compounds according to the inventive subject matter are in a D- or L-configuration. <br><br>
In another aspect of the inventive subject matter, contemplated compounds are employed which are useful to treat a viral infection, and may further be co-administered with a cytokine, preferably IFN-alpha-2b, an antibody, or Ribavirin (l-p-D-ribofuranosyl~l,2,4-triazole-3-30 carboxamide). <br><br>
3 3 13 APR 200A <br><br>
received. <br><br>
Attorney Docket No.: 330.97-PCT <br><br>
In a further aspect of the inventive subject matter, the selectivity of contemplated compounds with respect to a pharmacological effect in a target cell is increased by modifying the compounds with a modifying group, wherein the modifying group is covalently attached to the drug via a nitrogen atom, and wherein the modifying group is enzymatically removed from the 5 drug in the target cell. Particularly contemplated modifying groups include =NH, and -N(Ri)(R2) or =NRi, wherein Ri and R2 are independently hydrogen, a linear alkyl, a branched alkyl, an alkenyl, an alkynyl, an aralkyl, an aralkenyl, an aralkynyl, or an aryl, and wherein Ri or R2 may independently further comprise a nitrogen atom, an oxygen atom, a sulfur atom, or a halogen atom. <br><br>
10 Also disclosed is a method of treating a disease characterized by inflammation of an organ in a patient has a step in which contemplated compounds are administered to a patient at a dosage that causes systemic immunomodulation and not systemic immunosuppression of Type I and Type II responses. This causes immuno-suppression of Type I and Type II responses in the organ of the patient due to selective accumulation of contemplated compounds in the organ. <br><br>
15 Further disclosed is a method of stimulating neuronal growth has a step in which it is recognized that contemplated compounds are effective to stimulate growth of neurons within a given concentration range. In a further step, the compounds are provided to the neurons within the given concentration range. <br><br>
Various objects, features, aspects and advantages of the present invention will become <br><br>
20 more apparent from the following detailed description of various embodiments of the invention. <br><br>
Brief Description of The Drawing <br><br>
Figures 1A-1C are exemplary compounds according to the inventive subject matter. <br><br>
Figure 2 is an exemplary synthetic scheme for the synthesis of 1-P-L-ribofuranosyl-1,2,4-triazole-3 -carboxamide. <br><br>
25 Figure 3 is an alternative exemplary synthetic scheme for the synthesis of 1-P-L- <br><br>
ribofuranosyl- 1,2,4-triazole-3 -carboxamide. <br><br>
Figure 4 is another exemplary synthetic scheme for the synthesis of 1-P-L-ribofuranosyl-1,2,4-triazole-3-carboxamide. <br><br>
i* <br><br>
INTELLECTUAL PROPERTY OFPICF OF N.Z <br><br>
13 APR 20M <br><br>
received <br><br>
WO 01/45509 PCTAJSO0/34605 <br><br>
Figure 5 is a flow diagram depicting an exemplary method of organ-targeted immunosuppression according to the inventive subject matter. <br><br>
Figure 6 is a flow diagram depicting an exemplary method of stimulating cell growth according to the inventive subject matter. <br><br>
5 Detailed Description <br><br>
Contemplated Compounds <br><br>
It is generally contemplated that all nucleotides, nucleosides, and their corresponding analogs are suitable for use in conjunction with the teachings presented herein, wherein all of the 10 contemplated compounds may be in their respective L-configuration or D-configuration. However, particularly preferred compounds include phosphorylated and unphosphorylated Levovirin™ (l-P-L-ribofuranosyl-l,2,4-triazole-3-carboxamide, Structure 1), in which R may be hydrogen, or a phosphorous or sulfur-containing group. Where R is a phosphorous containing group, it is especially preferred that R is a monophosphate, a diphosphate, or a triphosphate as 15 depicted in Figures 1A-1C. <br><br>
20 Depending on the chemical environment (and especially depending on the pH), it should be appreciated that the phosphate groups may be in their corresponding mono-, di-, tri-, and tetra-protonated forms, and it should also be appreciated that when the phosphate groups are partially or completely deprotonated, salts may be formed with one or more mono- or multivalent cations. Especially contemplated cations are alkaline metal ions and alkaline earth 25 metal ions such as Mg2T, Cs2+, Na+, etc. <br><br>
In alternative aspects of the inventive subject matter, R may also be a POj2\ (PO;,)?", or (P03);,4"group in which one or more than one oxygen is replaced with a sulfur atom. While phosphate groups are generally preferred substitutents for R, other chemical groups may also be <br><br>
5 <br><br>
O <br><br>
HO OH <br><br>
Structure 1 <br><br>
WO 01/45509 PCT/US00/34605 <br><br>
employed, and particularly contemplated groups include mono-, or polyanionic groups, preferably with a tetragonal geometry. Thus, contemplated compounds especially include modified and unmodified phosphorvlated Levovirin™. Furthermore, it should be appreciated that contemplated compounds may also have a sugar moiety in the D-configuration, and an especially contemplated compound with a sugar in D-configuration is Ribavirin (1-P-D-ribofuranosyl-l,2,4-triazole-3-carboxamide). <br><br>
It should further be appreciated that at least some of the contemplated compounds exhibit a direct antiviral effect {i.e. contemplated compounds immediately inhibit viral propagation). Since most organisms possess phosphatases in various compartments, it is contemplated that the compounds according to the inventive subj ect matter may be gradually dephosphorylated, and one or more than one phosphate group may be removed at a time. For example, a triphosphorylated compound may be converted into a diphosphorylated, or monophosphorylated compound, or a diphosphorylated compound may be converted into Levovirin™ in a single reaction. <br><br>
With respect to dephosphorylation of phosphorylated Levovirin™, it is particularly contemplated that the mode of antiviral action shifts from a direct antiviral effect to an indirect antiviral effect. The shift from a direct antiviral response to an indirect antiviral response is particularly advantageous, because even though the contemplated compounds are metabolized they retain anti-viral action over an extended period. Therefore, it should be appreciated that the mode of action of contemplated compounds, and particularly phosphorylated Levovirin™, is actually at least bimodal - comprising a direct antiviral effect portion and an indirect antiviral effect portion. <br><br>
With respect to the rate of dephosphorylation it is contemplated that phosphorylated Levovirin™ is dephosphorylated at a considerably slower rate than phosphorylated Ribavirin, an effect that is contemplated to be due to the L-configuration of the ribose in Levovirin™. With respect to the compartment or organ where dephosphorylation may occur, it is contemplated that dephosphorylation preferably takes place in the liver, however, other organs and compartments, including kidney, neuronal cells, and blood stream are also contemplated. <br><br>
It should be especially appreciated that all known prodrug forms of contemplated compounds are appropriate for use in conjunction with the teachings presented herein, and particularly contemplated prodrug forms include covalent modifications that may be <br><br>
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enzymatically (e.g., by a aminohydrolase, an oxidoreductase, or a transferase) removed from contemplated compounds. Exemplary suitable prodrug forms are described in U.S. Patent Application number 09/594,410, filed 06/16/00, incorporated herein by reference, and in "Prodrugs" by Kenneth B. Sloan (Marcel Dekker; ISBN: 0824786297), or "Design of Prodrugs" 5 by Hans Bundgaard (ASIN: 044480675X ), also incorporated herein by reference. <br><br>
Further, especially contemplated examples of suitable prodrugs include prodrugs formed by addition of a nitrogen-containing group to the carboxamide moiety of Levovirin™, which may be especially advantageous where contemplated compounds are preferentially directed to the liver. For example, the inventors have discovered (unpublished results) that the specificity of 10 Levovirin™ with respect to its pharmacological effect in hepatocytes can be improved by modifying Levovirin™ with a nitrogen-containing modifying group that is selectively removed in hepatocytes. Structure 2 below shows Levovirin™, and Structure 3 shows Levovirin™ modified at the carboxamide group to form a carboxamidine group. <br><br>
O NH <br><br>
15 <br><br>
HO OH HO OH <br><br>
Structure 2 Structure 3 <br><br>
It is particularly contemplated that a modification of Levovirin™ with a (preferably nitrogen-containing) modifying group that can be selectively removed in a target cell (e.g., a hepatocyte) 20 will (1) increase the selectivity of Levovirin™ with respect to the target cell, thereby (2) <br><br>
reducing the overall dosage to achieve a desired effective concentration, and (3) reduce potential toxicity in non-target cells. It is further contemplated that the modifying group is covalently bound to the carbonyl atom of the carboxamide group. <br><br>
In further alternative aspects, the nitrogen containing modifying group need not be 25 limited to an =NH group, but may also include various primary and secondary amines. It is generally contemplated that suitable modifying groups have the structure -N(Ri)(R2) or =NRi, wherein R| and R? are independently hydrogen, linear or branched alkyl, alkenyl, alkynyl, aralkyl, aralkenyl, or aralkynyl, aryl, all of which may further comprise heteroatoms including nitrogen, oxygen, sulfur, or a halogen. It is especially preferred, however, that alternative <br><br>
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modifying groups are enzymatically removable from Levovirin™, and particularly contemplated enzymes include aminohydrolases such as liver deaminases (e.g., adenosine or cytosine deaminase), liver deamidases (e.g., aryl deamidase) and liver transaminases (glutamate-pyruvate transaminase). <br><br>
5 Although not limiting to the inventive concept presented herein, it is contemplated that the modifying group may inactivate Levovirin™, or prevent subsequent activation once the modified Levovirin™ is presented to a non-target cell. On the other hand, the nitrogen-containing modifying group may also prevent metabolic activation of the modified Levovirin™. With respect to the step of modifying Levovirin™, it is contemplated that the modification may 10 comprise an organo-synthetic modification, an enzymatic modification, or a de-novo synthesis to produce the modified Levovirin™. <br><br>
With respect to the enzymatic removal of the modification group, it is contemplated that, depending on the type of the target cell and the modifying group, the enzymatic removal may vary considerably. Enzymatic removal may include enzymes from various classes, including 15 hydrolases, transferases, lyases, and oxidoreductases, and particularly preferred subclasses are adenosine and cytosine deaminases, arginases, transaminases, and arylamidases. It should further be appreciated that contemplated enzymes for the enzymatic removal of the modification group may exclusively be expressed in the target cells, however, in alternative aspects of the inventive subject matter appropriate enzymes may also be expressed in cells other than the target cells, so 20 long as the enzyme is not ubiquitously expressed in all cells in a cell containing system. It should further be appreciated that contemplated enzymes are preferably natively expressed (i.e., are non-recombinant) in the respective target cells under normal and/or pathological conditions. For example, it is known that glutamine-pyruvate transaminase is constitutively expressed with relatively high selectivity in liver cells, and may therefore be a suitable enzyme for removal of a 25 modification group. Alternatively, it is known that cytosine deaminase is expressed in relatively high quantities in colon cancer cells, but not, or only in minor quantities in normal colon cells. <br><br>
Synthesis of contemplated compounds <br><br>
It is generally contemplated that all known methods of synthesis for D-nucleotides, 30 D-nucleosides, and their respective analogs may be adapted for the synthesis of contemplated compounds in the L-configuration (e.g., by replacing the sugar moiety in D-configuration with a <br><br>
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WO 01/45509 PCT/US00/34605 <br><br>
sugar moiety in the corresponding L-configuration). An exemplary synthetic scheme for the synthesis of Levovirin™ (l-(3-L-ribofuranosyl-l,2,4-triazole-3-carboxamide) is depicted in Figure 2. <br><br>
5 Synthesis of 1,2,3,5-Tetra-O-acetyl-fl-L-ribofuranose (1) <br><br>
To a stirred solution of L-ribose (50.0g, 333.33mmol) in anhydrous methanol (500ml) at room temperature was added freshly prepared dry methanolic HC1 (40ml, prepared by bubbling dry HC1 gas into methanol at 0°C to a weight increase of 4g) via syringe during a 15 min. period under argon atmosphere. After the addition of methanolic HCL, the reaction mixture was 10 allowed to stir at room temperature for 3-4h. Dry pyridine (100ml) was added and evaporated to dryness under high vacuum below 40°C. This process was repeated a second time with additional dry pyridine (100ml). The residue was dissolved in dry pyridine (250ml) and cooled in an ice bath to 0°C under argon atmosphere. To this cold stirred solution was added acetic anhydride (100ml) via a dropping funnel during a 15 min. period. After the addition of acetic 15 anhydride, the reaction was allowed to stir at room temperature under exclusion of moisture for 24h. The reaction mixture was evaporated to dryness. The residue was partitioned between ethyl acetate (400ml) and water (400ml), and extracted in EtOAc. The aqueous layer was extracted again with EtOAc (100ml). The combined EtOAc extract was washed with water (400ml), saturated NaHCOj (2x 300ml), water (300ml), and brine (200ml). The organic extract was dried 20 over anhydrous Na2SC>4, filtered, and the filtrate evaporated to dryness. The residue was co-evaporated with dry toluene (2x150ml) at high vacuum. The dried oily residue (92g, 95%) was used as such for the following reaction without further characterization. <br><br>
The syrup (92g) from the above reaction was dissolved in glacial acetic acid (300ml) and treated with acetic anhydride (75ml) at room temperature. The solution was cooled to 0-5°C in 25 an ice bath under argon atmosphere. Concentrated H2SO4 (21ml) was added slowly during a <br><br>
15min. period. After the addition of H2SO4, the reaction mixture was stirred at room temperature for 14h, poured on crushed ice (500g), and stirred until the ice melted. Water (500ml) was added and extracted with CHCI3 (2x300ml). The chloroform extract was washed with water (3x400ml), saturated NaHCOj, (2x300ml), water (200ml) and brine (200ml). The washed organic extract 30 was dried over anhydrous MgSC>4, filtered and evaporated to dryness to give an oily residue (99g). The residue was co-evaporated with dry toluene (200ml) and dissolved in ethyl ether <br><br>
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(200ml), which upon cooling at 10°C for a day produced colorless crystals. The crystalline solid was filtered, washed with hexanes. ether (2:1, 50ml), and dried to give a 60.5g product. <br><br>
Synthesis of Melhyl-l-(2,3,5-tri-0-acetyl-j3-L-ribofuranosyl)-l,2,4-triazole-3-carboxylate (3) 5 and Methyl-l-(2,3,5-tri-0-acetyl-j3-L-ribofuranosyl)-l,2,4-triazole-5-carboxylate (4) <br><br>
A mixture of methyl-l,2,4-triazole-3-carboxylate (25.4g, 200mmol), 1,2,3,5-tetra-O-acetyl-(3-L-ribofuranose (63,66g, 200mmol) and bis(p-nitrophenyl)phosphate (lg) were placed in an RB flask (500ml). The flask was placed in a preheated oil bath at 165-175°C under water aspirator vacuum with stirring for 25min. The acetic acid displaced was collected in an ice-cold 10 trap that was placed between the aspirator and the RB flask. The flask was removed from the oil bath and allowed to cool. When the temperature of the flask reached roughly 60-70°C, EtOAc (300ml) and saturated NaHCO;, (150ml) were introduced, and extracted in EtOAc. The aqueous layer was extracted again with EtOAc (200ml). The combined EtOAC extract was washed with saturated NaHCOs (300ml), water (300ml) and brine (200ml). The organic extract was dried 15 over anhydrous Na^SO^ filtered and the filtrate was evaporated to dryness. The residue was dissolved in EtOH (100ml) and diluted with MeOH (60ml), which on cooling at 0°C for 12h produced colorless crystals. The solid was filtered, washed with minimum cold EtOH (20ml), and dried at high vacuum over solid NaOH to give 60g (78%). The filtrate was evaporated to dryness and purified on a silica column using ChCl3-> EtOAc (9:1) as the eluent. Two products 20 were isolated from the filtrate: fast moving product 8.5g (11%) and slow moving product 5g(6.5%). The slow moving product matched with the crystallized product. The fast moving product was found to be (4) and obtained as foam. The combined yield of (3) was 65g (84%). <br><br>
Synthesis of l-fi-R.ibofuranosyl-l,2,4-triazole-3-carboxamide (5) <br><br>
25 Methyl-1 -(2,3,5 -tri-O-acetyl-P -L-rib ofuranosyl)-1,2,4-triazoI e-3 -carboxylate (62g, <br><br>
161mmol) was placed in a steel bomb and treated with freshly prepared methanolic ammonia (350ml, prepared by passing dry HCL gas into dry methanol at 0°C until saturation) at 0°C. The steel bomb was closed and stirred at room temperature for 18h. The steel bomb was then cooled to 0°C, opened, and the content evaporated to dryness. The residue was treated with dry ethanol 30 (100ml) and evaporated to dryness. The residue obtained was triturated with acetone to give a solid, which was filtered and washed with acetone. The solid was dried overnight at room <br><br>
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temperature and dissolved in a hot EtOH (600ml) and water (10ml) mixture. The volume of the EtOH solution was reduced to 150ml by heating and stirring on a hot plate. The hot EtOH solution on cooling provided colorless crystals, which were filtered, washed with acetone, and dried under vacuum. Further concentration of the filtrate gave additional material. The total yield 5 was 35g (89%). <br><br>
In an alternative aspect of the inventive subject matter, it is contemplated that the synthesis of Levovirin™ may also employ one or more enzymatic conversions. For example, the acetylation of L-ribose may be performed with a suitable acetyl-transferase (e.g., EC 2.3.1.xx). In another example, the formation of the carboxamide group from the corresponding methylester 10 may be facilitated by a single or dual-enzyme system involving an esterase (e.g., EC 3.1.1.xx) and/or aminotransferase (e.g., EC 2.6.1.xx). In still another example, Levovirin™ may be enzymatically converted into the corresponding mono-, di-, or triphosphate (e.g., EC 3.1.3.xx or EC3.1.4.xx). <br><br>
It is still further contemplated that various catalysts other than bis(p-itrophenyl)phosphate 15 in quantities other than lg maybe utilized. Changing the amount (i.e., the molar fraction) of the catalyst may advantageously increase the selectivity of the reaction towards a higher yield of the desired Ni isomer (L-ribose coupled to the Nj atom of the triazole ring) over the N2 isomer. For example, appropriate amounts of bis(p-nitrophenyl)phosphate include amounts between 3-30mmol, and more. Alternatively, where appropriate, amounts lower than 3mmol (0.3mmol -20 2.99mmol) may be included. In further alternative aspects of the inventive subject matter, the catalyst need not be limited to bis(p-nitrophenyl)phosphate, and alternative catalysts include p-toluenesulfonic acid, trichloro acetic acid, and p-nitrobenzoic acid. <br><br>
With respect to the reaction temperature, it is particularly contemplated that lower temperatures may further increase the selectivity of the reaction towards a higher yield of the 25 desired Ni isomer over the N? isomer. Therefore, it is contemplated that appropriate temperatures for the coupling reaction between the triazole moiety and the ribose moiety include temperatures between about 155-165°C, more preferably between 145-165°C, and most preferably between 130-165°C. <br><br>
In further alternative aspects of the inventive subject matter, it is contemplated that the 30 selectivity of the reaction towards a higher yield of the desired Ni isomer over the N? isomer may also be favorably influenced by a chemical modification of the methyl-l,2,4-triazole-3- <br><br>
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carboxylate. Chemical modifications include formation of a complexing structure that involves the N2 atom, steric hindrance, and direct chemical modifications of the N2-atom. For example, the free electron pair in the N2 atom of the triazole moiety and an electron donor in a modified carboxylate group may be employed to complex a metal ion, thereby reducing the availability of 5 the Ni atom for coupling with the ribose moiety. In another example, the carboxylate group in the methyl-l,2.4-triazole-3-carboxylate may be modified with a relatively bulky group that preferentially and sterically blocks or reduces reactions occurring at the N2 atom. Alternatively, the N2 atom may be directly modified by a protecting group, and suitable protecting groups include t-Boc, and benzyl. <br><br>
10 Still further, it is contemplated that a higher yield of the desired Ni isomer over the N2 <br><br>
isomer may also be achieved using enzymatic synthesis in which the ribose moiety (or an L-ribonucleotide) and a modified or non-modified methyl-l,2,4-triazoIe-3-carboxylate serve as a substrate for a ribosyltransferase (e.g., EC 2.4.2.5 or EC 2.4.2.6). <br><br>
Alternatively, Levovirin™ may be synthesized via coupling of a protected L-ribose to a 15 l,2,4-triazole-3-nitrile, with subsequent conversion of the nitrile group to the carboxamide as shown in Figure 3. In a still further alternative synthesis, the coupling of the triazole moiety with the ribose moiety may also be achieved in a reaction in which a (e.g., benzyl protected) ribose has an -NHNH2 group coupled to the Cj atom, that is reacted with the N| atom of the triazole carboxylate, wherein the triazole carboxylate is subsequently converted to the carboxamidine as 20 depicted in Figure 4. <br><br>
With respect to the synthesis of prodrug forms of contemplated L-nucleotides, L-nucleosides and their respective analogs, it should be appreciated that a particular synthetic scheme will generally depend on the structure of the particular compound. However, all manners of synthesis are considered suitable and contemplated synthetic schemes include in vitro 25 synthesis, enzymatic synthesis, in-vivo conversions, and any chemically reasonable combination thereof. Exemplary synthetic schemes for the formation of contemplated prodrugs are described in U.S. Patent Application number 09/594,410 (supra). <br><br>
Where contemplated L-nucleotides, L-nucleosides and their respective analogs are phosphorylated, it is contemplated that all manners of incorporating a phosphate group into a 30 nucleotide, nucleoside or their respective analogs are suitable. Conversion of contemplated nucleosides to their corresponding phosphorylated forms can be achieved synthetically (Hughes. <br><br>
WO 01/45509 PCT/US00/34605 <br><br>
B.G. e: al, (1983); 2\5'-o]igoadenylated and related 2',5-oligonucleotide analogues. 1. Substrate specificity of the interferon-induced murine 2\5'-oligoadcnylate synthetase and enzymatic synthesis of oligomers. Biochemistry, 22: 2116-2126). However, various alternative methods are also contemplated and include enzymatic phosphorylation (see e.g., Van Rompay, A.R., et al 5 (2000); Phosphorylation of nucleosides and nucleoside analogs by mammalian nucleoside monophosphate kinases; Pharmacol. Ther. 87(2-3):189-198), and organochemical phosphorylation in aqueous media (Schwartz, A. and Ponnamperuma, C. (1968); Phosphorylation of adenosine with linear polyphosphate salts in aqueous solution (Nature 218, 443). <br><br>
0 <br><br>
Uses of Contemplated Compounds <br><br>
It should generally be recognized that contemplated compounds may be employed in any treatment or therapy of a system that positively responds to administration of contemplated compounds. However, it is particularly preferred that contemplated compounds may be 15 employed in antiviral treatments (as a direct antiviral compound and/or as an indirect antiviral compound), in treatments to modulate the immune system, and in treatments to stimulate cellular growth. Further, particularly contemplated uses include administration of contemplated compounds in antineoplastic treatments. <br><br>
20 Antiviral treatments <br><br>
It is generally contemplated that compounds according to the inventive subject matter may be employed as a direct and/or indirect antiviral agent in a viral infection. It is particularly contemplated that a method of treating a viral infection in a patient comprises a step in which composition is administered to the patient at a dosage effective to inhibit viral propagation (i.e., 25 a process involving a host cell in which one or more than one virus causes the host cell to produce one or more copies of the virus, wherein the term "to produce" refers to nucleotide synthesis, protein processing, and protein assembly), wherein the composition comprises at least one the contemplated compounds, and preferably at least one of a compound according to Structures 1 and 3. Preferred dosages are in the range of between 5-2500mg/day, and more 30 preferably between 50-500mg/day. However, alternative dosages, routes, schedules and <br><br>
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Attorney Docket No.: 330.97-PCT <br><br>
formulations are also contemplated, and suitable alternative administrations are described below. While the use of contemplated compounds is not restricted to a particular virus in a particular viral infection, especially contemplated viral infections are an HIV infection, an HCV infection, an HBV infection, a RS V infection, an influenza virus infection, and a parainfluenza virus 5 infection. <br><br>
Peripheral blood mononuclear cells (PBMCs) are currently used to study several different infections, such as Hepatitis C, HIV, Hepatitis B and varieties of the Herpes virus. (Antivir. <br><br>
Chem. Chemother. 2000 July; 11(4); 291-301; J. Infect. Dis. 1998 Oct; 178(4); 1189-92; <br><br>
Virology 2000 Mar.; 268(l):12-60.) PMBCs are infected with the desired virus, and the cell 10 lines are then studied for relevant information on how particular drugs interact with the PBMCs <br><br>
• and how the infected PBMCs act over time or under different environmental conditions. Based <br><br>
> <br><br>
on the studies conducted with infected PBMCs, models can be generated that show the effects of particular pharmaceuticals, environments, and/or conditions on the PBMC-Virus infected cells. <br><br>
The present inventors have discovered (unpublished results) that Ribavirin shows a 15 positive response against PBMC-HIV infected cells. Surprisingly, L-ribavirin (Levovirin™) also shows a similar immunomodulatory profile against PBMC-HIV infected cells despite the body's lack of enzymes necessary to phosphorylate the Levovirin™ present in the patient. Based on the above observations, along with other related information and tests, it is contemplated that Levovirin™, phosphorylated Levovirin™, and modified Levovirin™ according to Structure 3 20 can be utilized in the treatment of HIV and related viruses. <br><br>
• <br><br>
Immunomodulation <br><br>
In Figure 5, a method of organ-targeted immunosuppression 500 has a first step 510 in which a drug is provided that reduces both a Type 1 response and a Type 2 response when <br><br>
25 administered above an immunosuppressive concentration, and increases the Type 1 response relative to the Type 2 response when administered below the immunosuppressive concentration, <br><br>
wherein the drug accumulates preferentially in a target organ. In a subsequent step 520, the drug is administered to a patient in a dosage effective to accumulate the drug in the target organ to the immunosuppressive concentration. Consequently, it is contemplated that a method of treating a <br><br>
30 disease characterized by liver inflammation in a patient may comprise one sten in ^ <br><br>
f INTELLECTUAL PROPERTY OFRCF OF N.Z <br><br>
14 13 APR 2001! <br><br>
received tl—lll III—— <br><br>
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compound is provided, wherein the compound comprises Levovirin, phosphorylated Levovirin™, a modified phosphorylated Levovirin™, or a modified Ribavirin (supra). In a further step, the compound is administered to the patient at a dosage that (a) causes systemic immunomodulation and not systemic immunosuppression of Type I and Type II responses, and 5 (b) causes immunosuppression of Type I and Type II responses in the patient's liver. <br><br>
The term "immunosuppression" refers to an event in which T and/or B cell clones of lymphocytes are depleted in size or suppressed in their reactivity, expansion or differentiation. Immunosuppression may thereby arise from activation of specific or nonspecific T suppressor lymphocytes of either T or B clones, or by drugs that have generalized effects on most or all T or 10 B lymphocytes. For example, Cyclosporin A and FK506 act relatively specifically on T cells, while alkylating agents such as cyclophosphamide are less specific in their action. <br><br>
As used herein, the term "cytokine" refers to a group of soluble proteins and peptides which act as humoral regulators at nano- to picomolar concentrations and which, either under normal or pathological conditions, modulate the functional activities of individual cells and 15 tissues. Cytokines also mediate interactions between cells directly and regulate processes taking place in the extra-cellular environment. <br><br>
As further used herein, the term "lymphokines" refers to a subset of cytokines produced by helper T cells, and are generally considered to fall into two subclasses, Type 1 and Type 2. Type 1 cells produce interleukin 2 (IL-2), tumor necrosis factor (TNFa) and interferon gamma 20 (IFNy), and are responsible primarily for cell-mediated immunity such as delayed type hypersensitivity and antiviral immunity. In contrast, Type 2 cells produce interleukins, IL4, IL-5, IL-6, IL-9, IL-10, and IL-13, and are primarily involved in assisting humoral immune responses such as those seen in response to allergens (e.g. IgE and IgG4 antibody isotype switching). <br><br>
Therefore, the terms Type 1 and Type 2 "responses" are meant to include the entire range 25 of effects resulting from induction of Type 1 and Type 2 lymphocytes, respectively. Among other things, such responses include increased production of the corresponding cytokines, increased proliferation of the corresponding lymphocytes, and other effects associated with increased production of cytokines, including motility effects. A Type 1 response is generally characterized by an increase in IL-2, TNF-a, and IFN-y, whereas a Type 2 response is typically 30 characterized by an increase in IL4, IL-5, IL-6, and IL-10. <br><br>
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As still further used herein, the term the ding "accumulates preferentially" in a target organ refers to a selective mechanism of a target organ resulting in an increased net uptake or retention of the drug into the target organ relative to other tissue or organs. The mechanism may thereby include active import via transporters, receptors, vesicles, etc, but may also be based on 5 physicochemical principles, including pH dependent charge of the drug, different solubility of the drug in environments with altered ionic strength, chemical or enzymatic modification within a target organ or target cell, and so forth. <br><br>
In a preferred aspect, the drug is Ribavirin, which is provided to a patient with an HCV (Hepatitis C Virus) infection, and Ribavirin is orally administered to the patient in a single 10 dosage of 600mg/day for a period of 180 days. A single dosage of 600mg/day is generally below a systemic immunosuppressive concentration, however is effective to preferentially accumulate in the liver. Thus, the concentration of Ribavirin in the target organ (here: the liver) will significantly increase and reach an immunosuppressive concentration in the liver. Ribavirin is known to increase a Type 1 response relative to a Type 2 response, and to reduce the Type 1 and 15 Type 2 response at relatively high concentrations. Examples are set forth in International Patent Application Number PCT/US98/00634 filed on January 13,1998, incorporated herein by reference. <br><br>
In alternative aspects of the inventive subject matter, the drug need not necessarily be limited to Ribavirin, and alternative drugs include contemplated compounds (supra), particularly 20 modified and unmodified Levovirin™ and phosphorylated Levovirin™. Further alternative drugs include contemplated compounds so long as alternative compounds reduce both a Type 1 response and a Type 2 response at an immunosuppressive concentration, and increase the Type 1 response relative to the Type 2 response below the immunosuppressive concentration. <br><br>
With respect to the patient, various viral infections other than HCV infection are also 25 contemplated, including infections with arboviruses. Consequently, the target organ is not restricted to the liver, but may also include other organs such as the brain, the lung, the spleen, the thymus, the kidneys, etc. In general, it is contemplated that the disease that can be treated with the method according to the subject matter presented herein, will depend on the drug's specific accumulation pattern (i.e. in which organ the drug preferentially accumulates). For 30 example, Ribavirin and Levovirin™ both preferentially accumulate in the liver, and reduce both the Type 1 and Type 2 response above an immunosuppressive concentration. Therefore, diseases <br><br>
16 <br><br>
Attbrney Docket No.: 330.97-PCT <br><br>
in which suppression of an immune response in the liver is desirable are especially contemplated, and include hepatitis C, autoimmune/lupoid hepatitis, liver transplant recipients, etc. <br><br>
It should be especially appreciated that the method described herein is not designed to 5 provide a direct antiviral treatment, but is designed to at least partially suppress an immune response in an organ that is infected with a virus. Organ targeted immune suppression is contemplated to be especially advantageous in hepatitis C, where the organ damage is not immediately attributable to the HCV virus, but rather to an infection-induced imbalance between a Type 1 response and a Type 2 response. Therefore, a method of treatment with a drug that 10 reduces specifically both the Type 1 and Type 2 response in the liver of a patient infected with HCV is contemplated to prevent hepatic damage prophylactically as well as in therapeutic approach. Since Ribavirin and Levovirin™ both have excellent tolerability in humans, long-term prophylaxis, and long-term treatment are particularly advantageous. <br><br>
With respect to the administration (route, dosage, schedule, term, etc.) of Ribavirin or 15 alternative contemplated compounds, the same considerations as described below apply. It is further contemplated that Ribavirin or alternative contemplated compounds can be employed in a general health setting, as opposed to a clinical, therapeutic setting. Consequently, it is contemplated that Ribavirin or alternative contemplated compounds may also be used to improve digestion. For example, one or more of the compounds may be taken by an individual 20 suffering from poor digestion - whether the poor digestion is due to liver conditions such as Hepatitis B or C infections, or indeed any other conditions characterized by liver inflammation. In such instances, digestion can be improved by having the person take Ribavirin or a Ribavirin like compound below an amount normally producing systemic immunosuppression, but in an amount that accumulates in the liver to a concentration that produces immunosuppression in the 25 person's liver. <br><br>
Another example of a non-clinical, non-therapeutic use is for a person to take Ribavirin or alternative contemplated compounds as a means of improving skin color. It is particularly contemplated that skin color can be improved by having the person take Ribavirin or alternative contemplated compounds below an amount normally producing systemic immunosuppression, 30 but in an amount that accumulates in the liver to a concentration that produces immunosuppression in the person's liver. <br><br>
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In all of these methods it is particularly contemplated to utilize Ribavirin (l-(5-Deoxy-(3-D-ribofuranosyl)-l,2,4-triazole-3-carboxamide) or Levovirin™ (l-(5-Deoxy-p-L-ribofuranosyl)-l,2,4-triazole-3-carboxamide), or any of their mono-, di-, or tn-phosphorylated forms. The amount taken or administered is preferably sufficient to produce a systemic immunomodulation 5 of Type I and Type II responses, and a suppression in the liver of both Type I and Type II <br><br>
responses. Especially preferred amounts are between about 300mg/day and about 800mg/day, although in some individuals the range may be as low as about 50-100 mg/day up to as high as 2000-2400 mg/day. Effects on other organs are also contemplated, including the brain or other organs in which Ribavirin is known to significantly accumulate. <br><br>
10 <br><br>
Stimulation of neuronal growth <br><br>
As used herein, the term "stimulating neuronal growth" refers to any process in which cell growth and/or division is either initiated from a resting cell, or accelerated in a growing and/or dividing cell, wherein "neuronal" refers to all cells that are directly or indirectly involved 15 in the propagation of cognitive, sensory or motor signals. For example, neurons are contemplated to be directly involved in signal propagation, while myelin sheath cells or glia cells are indirectly involved by virtue of their insulating function or structural/metabolic support to a neuron. Similarly, receptors are also considered neuronal cells under the scope of this definition. In contrast, cells forming the inner and outer layer of the dura are not considered neuronal cells, 20 since they are not directly or indirectly involved the propagation of cognitive, sensory or motor signals. <br><br>
The inventors surprisingly discovered that Ribavirin is effective to stimulate neuronal growth, and the inventors further contemplate that the various phosphorylated analogs of Ribavirin may also be effective to stimulate such growth. It is still further contemplated that 25 Levovirin™1 and its phosphorylated analogs may be effective in a similar manner. In a particular experiment, it has been recognized that Levovirin™ is effective to stimulate growth of unipolar neuronal cells in vitro within a concentration range of 0.5uM to 500(iM. Consequently, addition of Levovirin™ to a culture medium at a concentration of about 5.0(J.M can be employed to stimulate growth of unipolar neuronal cells. <br><br>
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It should further be appreciated that methods of stimulating neuronal growth need not be limited to unipolar neuronal cells, but may include various alternative cells, including bipolar and multipolar neuronal cells. Furthermore, it is contemplated that in alternative aspects of methods of stimulating neuronal growth, individual cell types may be targeted in a population of 5 diverse neuronal cells. For example, unipolar, bipolar and multipolar neuronal cells may be targeted in complex neuronal structures such as the brain, the spinal chord, or the eye. Therefore, neurons may be part of a neuronal tissue that includes at least four of the following cell types: an astrocyte, a dendrocyte, a myelin sheath cell, a glia cell, a unipolar neuronal cell, a bipolar neuronal cell, a multipolar neuronal cell, and a receptor cell. <br><br>
10 Consequently, contemplated methods are not necessarily limited to stimulating neuronal growth in cell culture. In further alternative aspects of the inventive subject matter, it is contemplated that cells may be stimulated in a tissue culture, and it is particularly contemplated that neuronal cells may be stimulated in vivo. In vivo stimulation of neuronal growth may advantageously be utilized as a prophylactic treatment, or a therapeutic treatment. For example, <br><br>
15 contemplated methods according to the inventive subject matter may be utilized for prevention of demyelinating disorders or neurodegenerative diseases such as Alzheimer's disease or Parkinson's disease, or as a preventative treatment prior to operative procedures in a patient. Contemplated therapeutic treatments include reversion or attenuation of asphyxial, traumatic, toxic, infectious, degenerative, metabolic, ischemic or hypoxic insults. <br><br>
20 Consequently, as depicted in Figure 6, a method 600 of improving coordination in a patient has a first step 610 in which it is recognized that phosphorylated or unphosphorylated Ribavirin or Levovirin™ is effective to stimulate growth of neurons in vivo within a given concentration range. In a subsequent step 620, the patient takes an amount of phosphorylated or unphosphorylated Ribavirin or Levovirin™ that is effective to stimulate growth of at least some <br><br>
25 of the person's neurons. Improvement of eye-hand coordination is especially contemplated. <br><br>
In a preferred method of improving coordination in a person, it is recognized that Ribavirin is effective to stimulate growth of neuronal cells in vivo within a concentration range of 0.5pM to 500jj.M, and Ribavirin is orally administered to a patient suffering from a traumatic injury to the nen'us ischiadicus in a dosage of 1200mg/day. <br><br>
30 With respect to the patient, various conditions other than traumatic injury to the nervus ischiadicus are also contemplated, including mechanical and chemical damage to a plurality of <br><br>
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nerve cells, infection of neuronal cells with bacteria and/or viruses, and degenerative diseases. Regardless of the nature of the patient's condition, it is contemplated that the method according to the inventive subject matter may stimulate a wide range of neuronal cells, and it is especially contemplated that the stimulated neurons communicate between the person's brain and voluntary 5 muscles, or between the persons brain and skin sensors. <br><br>
Another class of contemplated methods includes improving tactile or other sensory sensitivity in a patient. Still another class of contemplated methods includes improving gross and fine motor control. <br><br>
While not wishing to be bound to a particular theory, it is contemplated that the 10 administration of Ribavirin, Levovirin™, or mono-, di- and triphosphorylated forms of <br><br>
Levovirin™ or Ribavirin may effect a change in the Type 1 or Type 2 response in a patient, <br><br>
which concomitantly may lead to a neuroprotective status, or a stimulation of neuronal growth. Therefore, it is contemplated that compounds according to the inventive subject matter may be administered as part of a treatment of a disease in a patient in a dosage range effective to 15 increase a Type 1 response and decrease a Type 2 response in the patient. With respect to in vivo administration (route, dosage, schedule, term, etc.) of Ribavirin or alternative contemplated compounds, the same considerations as described below apply. <br><br>
Antineoplastic treatment <br><br>
20 It is further contemplated that compounds according to the inventive subject matter may be employed as antineoplastic agent in treatment of a solid or lymphatic tumor, and contemplated neoplasms include various carcinomas, sarcomas, and lymphomas, and particularly include acute myeloid leukemia and chronic myeloid leukemia in blast crisis. It should further be appreciated that administration of contemplated compounds in antiviral treatments will generally 25 follow a route, dosage, schedule and term as employed with known D-nucleotides, <br><br>
D-nucleosides, and their respective analogs in antineoplastic treatments. <br><br>
20 <br><br>
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Administration of Contemplated Compounds <br><br>
PCT/US00/34605 <br><br>
With respect to administration of contemplated compounds, it should be appreciated that the compounds may be administered under any appropriate protocol in any appropriate pharmaceutical formulation. It is generally preferred that contemplated compounds are orally 5 administered. In alternative aspects of the inventive subject matter, it should be appreciated that various alternative administrations are also suitable, and it should further be recognized that a particular administration will generally depend on chemical stability, bioavailability, dosage, formulation, and/or desired pharmacokinetic/pharmacodynamic properties of contemplated compounds. Thus, appropriate administrations will include topical delivery {e.g., ointment, 10 spray, cream, etc.), parenteral systemic delivery (e.g., inhalation), and direct or indirect delivery to the blood stream (e.g., i.v. or i.m. injection, etc.). <br><br>
Consequently, the formulation of contemplated compounds may vary considerably. For example, where the drug or drug composition exhibits sufficient stability to pass through the gastro-intestinal system without undesired chemical or enzymatic modification, oral 15 formulations may include syrup, tablets, gel caps, powder, etc. On the other hand, where absorption or passage of contemplated compounds through the gastro-intestinal tract into the blood stream is problematic, suitable formulations especially include injectable solutions or suspensions (e.g., physiological saline solution buffered to a pH of about 7.2 to 7.5). <br><br>
With respect to the dosage of contemplated compounds, it should be appreciated that 20 various dosages are suitable, and contemplated dosages typically are in the range of lmg to several lOOmg, and even more. For example, where contemplated compounds are excreted or metabolized at a relatively low rate, or where long-term treatment is desired, dosages will typically be in the range between 5mg-200mg per day. On the other hand, where bioavailability of contemplated drugs is relatively low, or where metabolic conversion (e.g., dephosphorylation) 25 is relatively fast, dosages will typically be in the range between 100mg-2500mg per day. <br><br>
Writh respect to the dosage of L-nucleosides, and especially Levovirin™, it should further be appreciated that Levovirin™ appears not to be phosphorylated in vivo, at least not in hepatocytes and erythrocytes, and since the antiviral effect of Ribavirin appears to be dependent on phosphorylation, one of ordinary skill in the art would not expect Levovirin™ to have a direct <br><br>
30 antiviral effect. In fact, experiments (not reported) show no direct antiviral effect. The antiviral effect of Levovirin™ surprisingly appears to be at a dosage of not more than 200 rng per day, <br><br>
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preferably in the 10 to 200 mg range, more preferably in the 50 to 200 mg range, and even more preferably in the 50 to 100 mg range. This is supported by experimental evidence demonstrating that a given dose of Levovirin™ results in a serum level five times that of an equivalent dose of Ribavirin. <br><br>
5 Experiments show that Ribavirin is removed from serum by becoming phosphorylated in red blood cells (see, e.g., Homma, M. et al.; High-performance liquid chromatographic . determination of ribavirin in whole blood to assess disposition in erythrocytes; Antimicrob. Agents Chemother. (1999), 43(11):2716-9). Once phosphorylated, Ribavirin cannot leave the cells. Consequently, red blood cells act as a Ribavirin sink, and higher doses of Ribavirin are 10 needed to achieve a given serum level. Levovirin™ is not phosphorylated, and therefore, tends not to accumulate in red blood cells. As a result, red blood cells do not act as a Levovirin™ sink, and lower doses of Levovirin™ are sufficient to achieve a desired serum level. <br><br>
The schedule of administration may vary considerably, and contemplated schedules include a single dose over the entire course of treatment, multiple single daily doses over the 15 entire course of treatment, multiple daily doses, and permanent dosing (e.g., permanent infusion, implanted osmotic pump, etc.) for at least part of the course of treatment. While it is generally preferred that suitable schedules sustain constant delivery of contemplated compounds, burst delivery (i.e., at least one administration at a first dose followed by at least one more administration at a dose lower than the first dose) is also appropriate. With respect to the term 20 (i.e., duration) of treatment, it is contemplated that appropriate durations may vary between a single administration and several days, several weeks, several years, and even longer. For example, where contemplated compounds are employed in a cell culture, a single administration, or relatively short administration may be sufficient. On the other hand, where contemplated compounds are administered to treat an acute hepatic disease, appropriate treatment duration 25 may be in the range between several days and several weeks. Similarly, where chronic hepatic diseases are treated by administration of contemplated compounds, extended administration over one or more years may be suitable. <br><br>
hi still further alternative aspects of the inventive subject matter, contemplated compounds may be combined with additional phannaceutically active substances to assist in the 30 treatment of various diseases, and particularly viral infections. Additional phannaceutically active substances may be administered separately or together, and when administered separately, <br><br>
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administration may occur simultaneously or separately in any order. Especially contemplated additional phannaceutically active substances include antiviral agents and immune modulator substances. For example, antiviral agents include protease inhibitors, nucleotide and/or nucleoside analogs (and especially Ribavirin), and immune modulator substances may include 5 cytokines (e.g., interferon a and y, EL2, IL4, IL6, IL8, IL10, and IL12). <br><br>
Further contemplated pharmacologically active agents include anti-fungal agents such as tolnaftate, Fungizone™, Lotrimin™, Mycelex™, Nystatin and Amphoteracin; anti-parasitics such as Mintezol™, Niclocide™, Vermox™, and Flagyl™, bowel agents such as Immodium™, Lomotil™, and Phazyme™; anti-tumor agents such as interferon a and 7, Adriamycin™, 10 Cytoxan™, Imuran™, Methotrexate, Mithracin™, Tiazofurin™, Taxol™; deirnatologic agents such as Aclovate™, Cyclocort™, Denorex™, Florone™, Oxsoralen™, coal tar and salicylic acid; migraine preparations such as ergotamine compounds; steroids and immunosuppresants not listed above, including cyclosporins, Diprosone™, hydrocortisone; Floron™, Lidex™, Topicort™, and Valisone™; and metabolic agents such as insulin, and other drugs which may 15 not fit into the above categories. <br><br>
Preferred combinations of contemplated compounds with an interferon <br><br>
In a particularly preferred aspect of the inventive subject matter, a synergistic combination of Levovirin™ and at least one interferon, preferably IFN-a-2b, is contemplated. 20 Levovirin™ is typically not, or only to a significantly lesser extent than Ribavirin, <br><br>
phosphorylated in erythrocytes while still exhibiting antiviral and immunomodulatory activity. Consequently, it is contemplated that the pharmacological action of interferon, and especially in the treatment of hepatic diseases, can be potentiated by co-administration of Levovirin™ at significantly lower dosages as compared to Ribavirin. For example, it is contemplated that 25 effective synergistic doses of Levovirin™ in combination with interferon needed to treat HCV infection are projected to be in the 1-600 mg range, more preferably in the 10-400 mg range, still more preferably in the 50-300 mg range, and most preferably in the 100-300 mg range. <br><br>
Equivalent synergistic doses of Ribavirin are considered to be 600-800 mg. <br><br>
In another aspect of the inventive subject matter, it is contemplated that the synergistic 30 combination of Levovirin™ and interferon will result in reduced toxicity relative to a <br><br>
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combination of Ribavirin and interferon at equivalent effective dosages, predominantly due to the lack of significant phosphorylation in erythrocytes. Viewed from yet another perspective, it is contemplated that the synergistic combination of Levovirin™ and interferon specifically allows targeting of the liver due to the lack of phosphorylation of Levovirin™ in compartments other 5 than the liver, especially erythrocytes. <br><br>
With respect to co-administration of Levovirin™ and interferon, it is contemplated that all suitable routes and protocols are appropriate, and it is especially preferred that Levovirin™ and interferon are administered in a protocol similar to known administration protocols of Ribavirin and interferon. For example, Levovirin™ may be orally administered while Interferon 10 may be subcutaneously injected. In general, it is contemplated that co-administration of <br><br>
Levovirin™ and interferon may utilize schedules and routes independent from each other so long as both drugs are in the blood stream at measurable concentrations at the same time. It is further contemplated that effective dosages of Levovirin™ can be projected from the effective concentrations of Ribavirin in the liver where Ribavirin was administered. <br><br>
15 While Levovirin™ is particularly contemplated, chemical modifications including prodrug forms such as modified Levovirin™ (l-beta-L-ribofuranosyl-l,2,4-triazole-3-carboxamidine), mono- di- and triphosphorylated Levovirin™, and stereochemical variants (e.g., enantiomers, isomers, etc.) are also appropriate. Examples for suitable chemical modifications and prodrug forms are described in U.S. Patent Application Number 09/594410, (supra). It is 20 still further contemplated, that suitable drugs may also include drugs other than Levovirin™ and its variants, and particularly contemplated alternative drugs include liver specific prodrugs with an amine or amide group that can be enzymatically deaminated/deamidated in the liver. <br><br>
With respect to the interferon, it is contemplated that co-administration of Levovirin™ need not be limited to IFN-a-2b, and co-administration may also .include natural and synthetic 25 fragments, isoforms, and consensus fomis of interferon-alpha. Moreover, interferons other than interferon-alpha are also suitable, including interferon-beta and its natural and synthetic fragments, isoforms, and consensus fomis. While interferon is particularly contemplated, cytokines other than interferon and chemokines are also appropriate, including IL-2, IL-12, and TNF. It is especially contemplated, that pegylated forms of contemplated interferons (i.e. 30 contemplated interferons associated with polyethylene glycol) are also suitable for use in conjunction with the teachings presented herein. <br><br>
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Combination of contemplated compounds with a second compound that binds a viral protein or a cytokine <br><br>
Where the combination of contemplated compounds with other pharmacologically active agents is employed in an antiviral therapy, it is particularly contemplated that such combinations may comprise contemplated compounds with a direct and an indirect antiviral effect, and a second compound that increases the total antiviral effect (the total antiviral effect includes the direct antiviral effect and the indirect antiviral effect), wherein the second compound specifically binds a viral protein or a cytokine. <br><br>
With respect to contemplated compounds in the combination, nucleoside analogs are preferred, and it is even more preferred that the nucleoside analog is Ribavirin (l-(5-Deoxy-(3-D-ribofuranosyl)-l,2,4-triazole-3-carboxamide). Ribavirin is known to have a direct antiviral effect by inhibiting RNA and DNA virus replication [Huffman et al, Antimicrob. Agents Chemother (1973), 3: 235; Sidwell et al., Science (1972), 177: 705] and an indirect antiviral effect by suppressing Type 2 mediated T cell responses and promoting Type 1 mediated T cell responses as described in U.S. Patent Application Number 09/156,646, which is incorporated herein by reference. However, various compounds other than Ribavirin are also contemplated, and particularly include L-nucleoside analogs, so long as such alternative compounds have a direct and an indirect antiviral effect. For example, where especially high concentrations of an L-nucleoside analog are desirable, Levovirin™ may be employed. <br><br>
It should further be appreciated that depending on the chemical nature of the first compound, the first compound may have a more pronounced direct antiviral effect or a more pronounced indirect antiviral effect. Contemplated direct antiviral effects include inhibition of viral replication, for example, an inhibition of a reverse transcriptase, whereas contemplated indirect antiviral effects include a shift in a Type 1/Type 2 balance towards a Type 1 or Type 2 response as described in U.S. Patent Application Number 09/156,646. It should also be appreciated that an indirect antiviral effect may comprise a suppression of a Type 1 and Type 2 response, which is described in greater detail in U.S. Provisional Patent Application Number 60/172,097 (supra). The shift of a Type 1/Type 2 balance towards a Type 1 or Type 2 response or suppression of the Type 1/Type 2 response may be advantageously controlled by the same <br><br>
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first compound, wherein the dosage of the first compound determines the shift or suppression in a Type 1 or Type 2 response. <br><br>
With respect to the second compound, it is preferred that the second compound comprises an antibody (e.g., a monoclonal or polyclonal antibody). It should be appreciated, 5 however, that in alternative aspects of the inventive subject matter the antibody need not be restricted to a naturally occurring form of an antibody, but may also include a synthetic form of an antibody (e.g., mini antibodies obtained by phage panning, or other molecular evolution technology), or antibody fragments. Antibody fragments are especially desirable, where such fragments are produced by a recombinant cell, or where the molecular weight of the second 10 compound should be relatively low (i.e., below 75kDa). Contemplated antibody fragments include an Fab, an F(ab)i, and an scFab. Furthermore, it is contemplated that appropriate antibodies may be modified to introduce various additional features, including a reporter group, a second affinity moiety (e.g., a bispecific antibody), or a pharmacologically active molecule. For example, a reporter group may include a radioisotope, or a metal that is detectable with in 15 vivo scanning devices (e.g., magnetic resonance imaging). Contemplated pharmacologically active molecules may include reverse transcriptase inhibitors, protease inhibitors, or cytotoxic agents. The production of recombinant and non-recombinant antibodies is well known in the art (e.g., see Current Protocols in Immunology; John Wiley & Sons (1999); Edited by: John E. Coligan, Ada M. Kruisbeek, David H. Margulies, Ethan M. Shevach, Warren Strober), and it is 20 contemplated that all known methods for their production are suitable for use in conjunction with the teachings presented herein. Antibodies are typically administered by injection (e.g., i.v. injection), and the actual dose will typically lie between O.Olmg and several lOmg, however, where appropriate, lower dosages are also contemplated. <br><br>
It should further be appreciated that binding of the second compound to a viral protein or 25 a cytokine is particularly advantageous where binding leads to an inactivation of a viral protein and/or a cytokine, and it is contemplated that inactivation may occur via various mechanisms. For example, inactivation of a virus may be achieved by antibody-mediated precipitation (i.e., formation of a molecular network between antibodies and viruses). Alternatively, binding of the second compound may inactivate a virus by blocking or otherwise obstructing proteins or other 30 viral surface structures that are essential to the infectivity or propagation of the virus. Still further, binding of the second compound may occur with non-structural viral proteins, including viral polymerases and proteases. For example, contemplated binding targets (i.e., haptens) <br><br>
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WO 01/45509 PCT/US00/34605 <br><br>
include proteins such as the gp 120/41 of a HIV virus, but also proteins such as the reverse transcriptase of the HIV virus. Further contemplated viral proteins include proteins from a HIV virus, a hepatitis virus, an influenza virus, and an RSV virus. With respect to cytokines it is contemplated that inactivation may be achieved by sequestration of the cytokine from the pool of 5 cytokines. For example, where the hapten for contemplated second compounds is a Type 1 cytokine, particularly contemplated cytokines include interleukin-2, interferon-gamma, and tumor necrosis factor-beta, whereas in cases where the hapten for the second compound is a Type 2 cytokine, particularly contemplated cytokines include interleukin-4, interleukin-5, and interleukin-10. <br><br>
10 It is generally contemplated that inactivation of a virus or a cytokine by the second compound may have a plurality of desirable effects, which may or may not exhibit an additive or synergistic effect in combination with the first compound. For example, it is contemplated that in cases where the first compound has a direct antiviral effect (resulting in a significant reduction of viral titer), a second compound may even further reduce the virus titer by precipitating remaining 15 viruses. Alternatively, the second compound may reduce the number of infectious virus particles by binding to viral components that are essential for infectivity. It is further contemplated that where the second compound binds a cytokine, the second compound may shift the Type 1/Type 2 balance towards a Type 1 response by sequestering one or more Type 2 cytokines from the pool of cytokines, and thereby helping to restore cellular immunity while the virus load 20 is already significantly reduced. In another example, it is contemplated that where the first compound has an indirect antiviral effect (also resulting in a significant reduction of virus titer), a second compound may further reduce the virus titer by precipitating remaining viruses. Alternatively, one or more Type 1 and/or Type 2 cytokines may be sequestered by a second compound or mixture of second compounds thereby "fine tuning" (i.e., modulating) a Type 1 25 and/or Type 2 response induced by the first compound. <br><br>
It should be appreciated that a combination of a first compound that has a direct and indirect antiviral effect with a second compound that specifically binds a virus and/or a cytokine will reduce a viral titer not only by a mechanistic (i.e., enzyme inhibition), but also by a systemic (i.e., stimulation/modulation of immunity) action. It is especially contemplated that preferred 30 antiviral drug compositions include a first and second compound having a synergistic effect, <br><br>
which advantageously will help reduce the effective dosage of the first and second compound. It <br><br>
27 <br><br>
WO 01/45509 PCT/US00/34605 <br><br>
is still further contemplated that appropriate antiviral drug compositions may also be employed in a prophylactic treatment. <br><br>
Combination of contemplated compounds with Ribavirin <br><br>
5 It is particularly contemplated that co-administration of Levovirin™ with Ribavirin will reduce adverse side effects and improve tolerability of Ribavirin and/or Levovirin™. With respect to the ratio of Ribavirin to Levovirin™ in the co-administration, it is preferred that Levovirin™ is present in at least an equimolar amount of Ribavirin. However, it should be appreciated that various alternative ratios are also appropriate, and the particular ratio will 10 predominantly depend on the desired effect and dosage/route of administration. For example, where hemolytic anemia is of particular concern, Levovirin™ may be present in the coadministration in a range of about 5 lmol% to about 80mol%, or more. On the other hand, where tolerability of Levovirin™ is limiting, Levovirin™ may be present in the co-administration in a range of about 49mol% to about 20mol%, or less. <br><br>
15 It should further be appreciated that co-administration of Ribavirin and Levovirin™ need not necessarily employ the same route of administration. The term "co-administration" as used herein refers to any form of administration of Ribavirin and Levovirin™ such that Ribavirin and Levovirin™ are present in a measurable concentration in the system at the same time. Therefore, contemplated co-administrations include protocols in which Ribavirin is administered in one 20 route and Levovirin™ is administered in another route, wherein the co-administration may be performed simultaneously or at two different points in time. For example, Ribavirin may be administered orally while Levovirin™ may be injected intravenously. In another example, Ribavirin may be administered orally BID, and Levovirin™ may be administered orally QID. <br><br>
It is particularly contemplated that by variation of the molar fractions of Ribavirin and 25 Levovirin™ in a co-administration protocol, particularly desirable biological effects may be tailored to the specific needs of a patient, including modulation of the Type 1/Type 2 cytokine balance, direct antiviral effect, reduction in hematotoxic properties, etc. <br><br>
In another aspect of the inventive subject matter, it is contemplated that the administration or co-administration of Ribavirin and Levovirin™ will include a continuous 30 release and/or a reduced dosage at intervals that are more frequent. It is particularly <br><br>
28 <br><br>
WO 01/45509 PCT/US00/34605 <br><br>
contemplated that continuous release and/or reduced dosage at frequent intervals will reduce undesirable side effects and may increase the direct and/or indirect antiviral effect. While it is generally contemplated that compounds according to the inventive subject matter may be administered to any system, it is preferred that contemplated compounds are administered to a 5 mammal, preferably a human, or to a cell or tissue culture. <br><br>
Metabolites of Contemplated Compounds <br><br>
It is generally contemplated that Levovirin™ is metabolically inert when administered to a system, however, the inventors also contemplate that Levovirin™ may have metabolites, which 10 are shown in Structures 4-8. <br><br>
15 <br><br>
O <br><br>
H?N—\ <br><br>
N \ <br><br>
H <br><br>
Structure 4 <br><br>
O <br><br>
HO—\ <br><br>
y > <br><br>
N. <br><br>
N \ <br><br>
H <br><br>
Structure 5 <br><br>
O <br><br>
HO <br><br>
N <br><br>
N. <br><br>
'N <br><br>
> <br><br>
OH <br><br>
HO OH Structure 6 <br><br>
20 <br><br>
O <br><br>
H2N -4 <br><br>
N_ <br><br>
"N <br><br>
Q , OCOCH3 <br><br>
HO OH Structure 7 <br><br>
OCOCH, <br><br>
HO OH <br><br>
Structure 8 <br><br>
Structure 4 is a triazole carboxamide, Structure 5 is a triazole carboxylic acid, Structure 6 is a L-ribofuranosyl triazole carboxamide, Structure 7 is a 5'-acetyl L-ribofuranosyl triazole carboxamide, and Structure 8 is an 5'-acetyl-a-L-ribofuranosyl triazole carboxamide. <br><br>
29 <br><br>
WO 01/45509 PCT/US00/34605 <br><br>
While is it generally contemplated that the metabolic products of Levovirin™ are formed as a product of an enzymatic reaction, it should also be recognized that under suitable intra or extra-cellular conditions in a cellular system, metabolites may be formed without an enzymatic reaction. Thus, formation of metabolites from Levovirin™ may include redox reactions 5 (particularly oxidation), enzymatically catalyzed reactions {e.g., hydrolysis), and photochemical reactions. <br><br>
Contemplated reaction products are typically degradation products of Levovirin™, however, it should be recognized that metabolites may also include products fonned by addition of chemical groups {e.g., glycosylation or acetylation), and that such modified compounds may 10 be subject to subsequent degradation in the same or different compartment. While it is generally contemplated that the metabolites have a significantly reduced pharmacologically effect as compared to Levovirin™, it should be appreciated that the metabolites may have a pharmacological effect similar to Levovirin™. For example, the triazole or ribose moiety may serve as an effector (e.g., allosteric inhibitor). <br><br>
15 It is further contemplated that of a particular dose of Levovirin™ administered to a system, between 20% and 50%, preferably between 51% and 75%, more preferably between 76% and 99%, and most preferably 100% are excreted in an unmetabolized form. <br><br>
Examples <br><br>
20 Targeted hepatic immunosuppression employing Ribavirin <br><br>
Three placebo-controlled studies of Ribavirin in the treatment of chronic hepatitis C were conducted. These studies included 134 patients treated with Ribavirin and 97 patients who received a placebo. There were also two uncontrolled Phase II studies including a total of 23 patients treated with Ribavirin. The primary response parameter was normalization or reduction 25 of serum ALT levels. Response was also assessed in terms of elimination or reduction of serum HCV RNA levels, and improvement in liver histology as assessed by changes in Knodell scores. <br><br>
In all of the controlled and uncontrolled studies, using the definitions of response specified in the protocols and analysis plans, Ribavirin was statistically significantly superior to a placebo in normalizing and reducing ALT levels during treatment. In the integrated analyses <br><br>
30 <br><br>
WO 01/45509 PCT/US00/34605 <br><br>
based on all patients in the controlled studies, using a uniform definition of response including normalization of ALT at the end of treatment or a clinically meaningful level of partial response. 46% of Ribavirin patients were responders compared to 4% of placebo patients (p<0.001). Patients generally responded after two to three months of treatment and the response was maintained as long as treatment was continued. There was no evidence of loss of ALT response with increasing duration of treatment. Following withdrawal of Ribavirin at the end of the active treatment phase, 11.5% of responders had a sustained response throughout the follow-up period. <br><br>
Regarding improvement in liver histology, in each of the controlled studies there was a non-significant trend in favor of Ribavirin in the changes in total Knodell scores and many of the component scores. Analysis of the combined data by analysis of covariance using the baseline Knodell score as covariate resulted in statistically significant differences in favor of Ribavirin for the total score and each of the component scores. Thus in the controlled studies, in comparing all Ribavirin-treated patients with placebo recipients, Ribavirin had a modest but real effect in improving liver histology. Within the Ribavirin group, comparison of ALT responders and non-responders revealed that ALT responders experienced a significantly greater improvement in liver histology as compared to ALT non-responders. The mean fall in total Knodell score was approximately two points for ALT responders as compared to one point for all Ribavirin-treated patients. A fall in a total Knodell score of two points is generally considered by hepatologists to be clinically significant. There was thus a statistically significant positive correlation between ALT response and a clinically significant degree of improvement in liver histology. <br><br>
In all studies, the primary endpoint was defined as a reduction in ALT level. In all studies a complete ALT response was defined as normalization of the ALT level at the end of treatment. A partial ALT response was defined as either a 50% or greater reduction at the end of treatment from the patient's baseline value, or a 50% or greater reduction to a level not higher than 1.5 times the upper limit of normal. <br><br>
In studies 92-001 and 91-DK-178, the treatment groups were compared with respect to the effect of the study medication on symptoms relevant to hepatitis. This could not be done in study CT00/002 because the case report form did not permit the systematic collection of symptom data. <br><br>
In study 92-001, there was a statistically significant difference in favor of Ribavirin for decreased fatigue. At the end of treatment and at the end of the follow-up period, a higher <br><br>
31 <br><br>
WO 01/45509 PCT/USO0/34605 <br><br>
proportion of Ribavirin patients showed some improvement from baseline in fatigue compared to placebo patients (p=0.04 for end of treatment and p=0.006 for end of follow-up). In this study, there were no significant differences between the treatment groups for any other symptoms. <br><br>
In study 91-DK-I78, there were isolated significant differences between the treatment 5 groups in individual symptoms at individual visits, some favoring the placebo group and some the Ribavirin group, but there were no overall trends favoring either treatment group. <br><br>
Table 1 shows the response rates in terms of improvement in liver histology. There were no statistically significant differences between the treatment groups in the changes in Knodell scores in any of the studies, although there were numerical trends in favor of Ribavirin. In study 10 CTOO/002 there was a difference in favor of Ribavirin in one of the secondary parameters (lymphoid aggregates, p=0.05). <br><br>
Protocol Protocol Definition of Analysis Plan Definition of Result Response Response <br><br>
92-001 Comparison of treatment groups Same No significant difference with respect to the changes from between treatment pre- to post-treatment in each groups patient's Knodell scores <br><br>
91-DK-178 Long-term response: Comparison of treatment groups No significant difference <br><br>
Improvement in liver with respect to the changes from between treatment histopathology by "blinded pre- to post-treatment in each groups ranking of all liver biopsies for patient's Knodell scores the degree of current hepatic injury using the Wilcoxon rank sum test" <br><br>
CT00/002 Improvement in degree Comparison of treatment groups No significant difference of inflammatory activity from with respect to the changes from between treatment pre- to post treatment as pre- to post-treatment in each groups assessed by Knodell scores patient's Knodell scores <br><br>
Pre- to post treatment changes in <br><br>
other histological parameters Reduction in lymphoid thought to be relevant to hepatitis aggregates in Ribavirin C group <br><br>
Table 1 - Comparison of Results of Controlled Studies - Liver Histology <br><br>
Further analyses were performed in respect of the different studies. However, to make the results 15 of these analyses more meaningful, the control studies data were combined to make the sample sizes larger. <br><br>
32 <br><br>
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Results of Integrated Analyses <br><br>
Analysis of Response to Ribavirin According to the Relevant Effectiveness Criteria -ALT Response During Ribavirin Therapy <br><br>
For the purposes of the integrated effectiveness analyses, the following definitions of ALT 5 response were used: <br><br>
Complete Response: Return to within the normal range at the end of treatment. <br><br>
Partial Response: 50% or greater reduction from the patient's baseline level to within 1.5 times the upper limit of normal at the end of treatment. <br><br>
Responder: Meets above definitions of either complete or partial response. The definition of 10 "responder" was determined by plotting the ALT values over time for the groups of patients fitting various definitions of response employed within each study. (The data were fitted with a cubic spline smoothing function Reinsch 1967). Three definitions of response were used: <br><br>
a. Complete response = ALT in normal range at end of treatment. <br><br>
b. Partial response (A) = 50% or greater reduction from the patient's baseline 15 level to within 1.5 times the upper limit of normal at the end of treatment. <br><br>
c. Partial response (B) = 50% or greater reduction from the patient's baseline level at the end of treatment. <br><br>
All other patients were considered non-responders. Plots were also constructed for Ribavirin-treated non-responders within each study and for all placebo patients (responders and non-20 responders) within each study. <br><br>
The three curves for "complete response" demonstrated that this response was achieved after approximately one third of the treatment period and was maintained thereafter. The three curves for "partial response (A)" demonstrated a similar pattern of response. The three curves for' "partial response (B)" demonstrated distinctly more variability of ALT levels during the 25 treatment periods. The plots for Ribavirin-treated non-responders and the plots for placebo patients demonstrated, as expected, a dispersion of the data points which did not change in any recognizable pattern across the treatment and follow-up periods. It was decided that the "partial <br><br>
WO 01/45509 PCT/US00/34605 <br><br>
response (B)" definition was inappropriate for the purpose, of the integrated effectiveness analyses. Due to the consistent pattern of response demonstrated by the "complete response" and "partial response (A)" definitions, and the fact that these definitions are clinically meaningful, it was decided that for the puipose of the integrated effectiveness analyses a "response' be defined 5 as either "complete response" or "partial response (A)". <br><br>
Table 2 displays the results for each study and for the combined database, using the above definition of ALT response. The proportions of responders in the two treatment groups were compared using either a Chi-square or Fisher's Exact test. <br><br>
Study <br><br>
Ribavirin n/N (%) <br><br>
Placebo n/N (%) <br><br>
p Value <br><br>
92-001 <br><br>
15/28 (53.6) <br><br>
1/30(3.3) <br><br>
<0.001 <br><br>
91-DK-178 <br><br>
11/29 (37.9) <br><br>
1/29 (3.4) <br><br>
<0.001 <br><br>
CT00/002 <br><br>
32/70 (45.7) <br><br>
2/36(5.6) <br><br>
<0.001 <br><br>
Combined database <br><br>
58/127 (45.7) <br><br>
4/95 (4.2) <br><br>
<0.001 <br><br>
n = Number of patients with an ALT response (integrated definition) N = All patients treated (intent-to-treat population) minus those without valid non-missing observations. <br><br>
10 Table 2: Percent ALT Response Rates <br><br>
For identifying the ALT value corresponding to the end of treatment, the last valid, non-missing observation, going back a maximum of two visits, was carried forward for those patients missing such a true value. This same policy was employed in two out of the three controlled studies (91-15 DK-178 and CTOO/002). Nine patients in the Ribavirin group and two placebo patients did not have such a valid non-missing observation available. The ALT response rates were consistent across the three controlled studies and ranged from 37.9 to 53.6%. When the data were combined, the ALT response rate was 45.7%. In all instances, the ALT response rates for patients treated with Ribavirin were statistically, significantly superior to the rates in patients 20 treated with placebo. In the placebo group, ALT response rates were consistently low, and ranged from 3.3 to 5.6% and 4.2% when the data were combined. <br><br>
ALT Response in the Follow-Up Period <br><br>
25 Table 3 summarizes the rates of sustained response in studies 92-001 and 91-DK-178 <br><br>
and in these two studies combined. The individual study, analysis plan definitions of sustained response are used. A sustained responder is essentially a patient with either normalization of ALT or a partial response at the end of treatment, who still meets either of these criteria throughout the follow-up period. It was not possible to provide this same analysis for study 30 CTOO/002 because too few patients had complete ALT data throughout the follow-up period. <br><br>
34 <br><br>
WO 01/45509 PCT/USQ0/34605 <br><br>
Study <br><br>
Ribavirin n/N (%) <br><br>
Placebo n/N (%) <br><br>
92-001 <br><br>
1/15(6.7) <br><br>
0/1 (0.0) <br><br>
91-DK-178 <br><br>
2/11 (18.2) <br><br>
0/1 (0.0) <br><br>
Combined database <br><br>
37*26(11.5) <br><br>
0/2 (0.0) <br><br>
n= Number of patients with sustained ALT response N = Number of patients with complete or partial response at the end of treatment (study analysis plan definitions) <br><br>
Table 3: Percent ALT Sustained Response Rates - Protocol Definitions <br><br>
In the two studies analyzed, the sustained ALT response rates were 6.7 and 18.2% for Ribavirin-treated patients compared with 0% for patients receiving placebo. Due to the low sample size 5 and the very low number of placebo responders a statistical analysis was not performed. <br><br>
Improvement in Knodell Scores <br><br>
Within each of the three controlled studies, there was a consistent numerical trend in favor of Ribavirin in the changes in total scores and in many of the component scores. This same trend was thus apparent when the data from the three studies was combined. The trend applies 10 not only to improvement of scores but also to worsening, indicating that even if no patients in either treatment group improve, then fewer patients in the Ribavirin group are worsening. This is an important observation considering that one objective of treatment is to prevent deterioration of a chronic and progressive condition. Analysis of the combined data by the CMH chi-square test does not reveal any statistically significant differences. Analysis of the combined data by 15 analysis of variance (as used in studies 92-001 and 91-DK-178) revealed a statistically significant difference in favor of Ribavirin for the total Knodell score but not for any of the component scores. <br><br>
The liver histology data was examined further by analysis of covariance, using the baseline Knodell score as covariate. Regression analysis of the baseline Knodell scores versus 20 the end of treatment scores for all Ribavirin-treated and placebo patients combined resulted in a slope of less than 1.0 but greater than zero. This indicated that the baseline Knodell score influenced the expectation of outcome of treatment, regardless of any difference between Ribavirin and placebo. Where the regression slope differs markedly from 1.0, analysis of covariance is a more appropriate test than analysis of variance (Fisher 1951). The result of the 25 analysis of covariance is displayed in Table 4. The mean changes in the scores for Ribavirin-treated patients are only small, but due to small variances, the differences from placebo are statistically significant. It is of interest to note that the only Knodell sub-score that does not <br><br>
35 <br><br>
WO 01/45509 PCT/US00/34605 <br><br>
improve is fibrosis, and that there is less deterioration in the Ribavirin group than in the placebo group. <br><br>
Mean Change in Score from Baseline to End of Treatment <br><br>
Knodell Component <br><br>
Ribavirin N = 107 <br><br>
Placebo N = 78 <br><br>
p Value <br><br>
Periportal Activity and Necrosis <br><br>
-0.40 <br><br>
-0.0 i <br><br>
0.0004 <br><br>
Portal Inflammation <br><br>
-0.30 <br><br>
-0.10 <br><br>
0.0206 <br><br>
Lobular Necrosis <br><br>
-0.33 <br><br>
-0.13 <br><br>
0.0019 <br><br>
Fibrosis <br><br>
+0.07 <br><br>
+0.25 <br><br>
0.0071 <br><br>
Total score <br><br>
-1.11 <br><br>
-0.05 <br><br>
0.0091 <br><br>
Table 4: Comparison of Ribavirin and Placebo in Terms of Changes in Knodell Scores from Baseline to End of Treatment -Analysis of Covariance Using Baseline Knodell Score as Covariate All Phase 111 Studies Combined <br><br>
Examination of Correlation between ALT Response and Improvement in Knodell Scores In each of the three controlled studies, Ribavirin was significantly more effective than placebo in normalizing and reducing ALT levels (An elevated serum ALT level is a biochemical indicator of hepatic inflammation). There was also a correlation between response to Ribavirin therapy in terms of normalization or reduction of ALT level within individual patients, and by an improvement in liver histology as determined by Knodell scores. We found that there was indeed a consistent trend towards a positive relationship between ALT response and improvement in Knodell scores when both parameters are treated in a categorical manner. In the combined database, this trend was statistically significant for the Total Knodell score (p = 0.008), Fibrosis (p = 0.014), and Portal Inflammation (p = 0.022) using the Cochran-Mantel-Haenszel (CMH) chi-square test (Table 5-7). <br><br>
Responder <br><br>
Non-Responder <br><br>
Protocol <br><br>
Response n <br><br>
% <br><br>
n <br><br>
% <br><br>
P-value' <br><br>
92-001 <br><br>
Improved <br><br>
7 <br><br>
46.7 <br><br>
4 <br><br>
33.3 <br><br>
0.099 <br><br>
Unchanged <br><br>
7 <br><br>
46.7 <br><br>
3 <br><br>
25.0 <br><br>
Worsened <br><br>
1 <br><br>
6.7 <br><br>
5 <br><br>
41.7 <br><br>
91-DK- <br><br>
Improved <br><br>
10 <br><br>
90.9 <br><br>
7 <br><br>
38.9 <br><br>
0.021 * <br><br>
178 <br><br>
Unchanged <br><br>
1 <br><br>
9.1 <br><br>
5 <br><br>
27.8 <br><br>
Worsened <br><br>
0 <br><br>
0.00 <br><br>
6 <br><br>
33.3 <br><br>
CTO0/002 <br><br>
Improved <br><br>
11 <br><br>
42.3 <br><br>
12 <br><br>
48.0 <br><br>
0.171 <br><br>
Unchanged <br><br>
11 <br><br>
42.3 <br><br>
5 <br><br>
20.0 <br><br>
Worsened <br><br>
4 <br><br>
15.4 <br><br>
8 <br><br>
32.0 <br><br>
Integrated <br><br>
Improved <br><br>
28 <br><br>
53.8 <br><br>
23 <br><br>
41.8 <br><br>
0.008 * <br><br>
Unchanged <br><br>
19 <br><br>
36.5 <br><br>
13 <br><br>
23.6 <br><br>
Worsened <br><br>
5 <br><br>
9.6 <br><br>
19 <br><br>
34.5 <br><br>
N= Number of patients in study n= Number of patients in response category %=(n/N)*100 1 CMH statistics * P<0.05 <br><br>
Table 5; Knodell Response Status by Controlled Studies - Total by ALT Response <br><br>
WO 01/45509 <br><br>
PCT/U S00/34605 <br><br>
Responder <br><br>
Non-Responder <br><br>
Protocol <br><br>
Response n <br><br>
% <br><br>
n <br><br>
% <br><br>
P-value i <br><br>
92-001 <br><br>
Improved <br><br>
2 <br><br>
13.3 <br><br>
1 <br><br>
0.00 <br><br>
0.434 <br><br>
Unchanged <br><br>
12 <br><br>
80.0 <br><br>
11 <br><br>
91.7 <br><br>
Worsened <br><br>
1 <br><br>
6.7 <br><br>
1 <br><br>
8.3 <br><br>
91-DK-178 <br><br>
Improved <br><br>
5 <br><br>
45.5 <br><br>
2 <br><br>
11.1 <br><br>
0.119 <br><br>
Unchanged <br><br>
4 <br><br>
36.4 <br><br>
11 <br><br>
61.1 <br><br>
Worsened <br><br>
2 <br><br>
18.2 <br><br>
5 <br><br>
27.8 <br><br>
CT00/002 <br><br>
Improved <br><br>
6 <br><br>
23.1 <br><br>
1 <br><br>
4.0 <br><br>
0.120 <br><br>
Unchanged <br><br>
18 <br><br>
69.2 <br><br>
20 <br><br>
80.0 <br><br>
Worsened <br><br>
2 <br><br>
7.7 <br><br>
4 <br><br>
16.0 <br><br>
Integrated <br><br>
Improved <br><br>
13 <br><br>
25.0 <br><br>
3 <br><br>
5.5 <br><br>
0.014 <br><br>
* <br><br>
Unchanged <br><br>
34 <br><br>
65.4 <br><br>
42 <br><br>
76.4 <br><br>
Worsened <br><br>
5 <br><br>
9.6 <br><br>
10 <br><br>
18.2 <br><br>
N= Number of patients in study n= <br><br>
Number of patients in response category %=(n/N)*100 1 <br><br>
CMH statistics <br><br>
* P<0.05 <br><br>
Table 6: Knodell Response by Controlled Studies - Fibrosis by ALT response <br><br>
Responder <br><br>
Non-Responder <br><br>
Protocol <br><br>
Response n <br><br>
% <br><br>
n <br><br>
% <br><br>
P-value1 <br><br>
i <br><br>
92-001 <br><br>
Improved <br><br>
5 <br><br>
33.3 <br><br>
3 <br><br>
25.0 <br><br>
0.220 <br><br>
Unchanged <br><br>
9 <br><br>
60.0 <br><br>
5 <br><br>
41.7 <br><br>
Worsened <br><br>
1 <br><br>
6.7 <br><br>
4 <br><br>
33.0 <br><br>
91-DK-178 <br><br>
Improved <br><br>
5 <br><br>
45.5 <br><br>
4 <br><br>
22.2 <br><br>
0.227 <br><br>
Unchanged <br><br>
6 <br><br>
54.5 <br><br>
11 <br><br>
61.1 <br><br>
Worsened <br><br>
0 <br><br>
0.00 <br><br>
3 <br><br>
16.7 <br><br>
CT00/002 <br><br>
Improved <br><br>
5 <br><br>
19.2 <br><br>
6 <br><br>
24.0 <br><br>
0.159 <br><br>
Unchanged <br><br>
21 <br><br>
80.8 <br><br>
16 <br><br>
64.0 <br><br>
Worsened <br><br>
0 <br><br>
0.00 <br><br>
3 <br><br>
12.0 <br><br>
Integrated <br><br>
Improved <br><br>
15 <br><br>
28.8 <br><br>
13 <br><br>
23.6 <br><br>
0.022 <br><br>
* <br><br>
Unchanged <br><br>
36 <br><br>
69.2 <br><br>
32 <br><br>
58.2 <br><br>
Worsened <br><br>
1 <br><br>
1.9 <br><br>
10 <br><br>
18.2 <br><br>
N= Number of patients in study n= <br><br>
Number of patients in response category %=(n/N)*100 ' <br><br>
CMH statistics <br><br>
* P<0.05 <br><br>
Table 7: ICnodell Response Status by Controlled Studies -Portal Inflammation by ALT Response <br><br>
5 <br><br>
The relationship between ALT response and improvement in liver histology was studied further in order to quantify the improvement in liver histology in patients responding to Ribavirin, and to determine if there was a subgroup of patients who derive a more substantial clinical benefit from treatment with Ribavirin. In each of the three controlled studies, Ribavirin-10 treated ALT responders and non-responders were compared in terms of the mean changes in total Knodell scores over the course of treatment. This analysis, displayed in Table 8 thus quantifies the directional changes displayed in Table 5. <br><br>
It can be seen that in each study there was a correlation between ALT response and improvement in liver histology, in that ALT response was associated with a greater improvement <br><br>
15 in liver histology as compared to ALT non-responders. This effect was particularly striking in study 91-DK-178, where there was a mean Knodell score reduction of 4.09 in ALT responders <br><br>
37 <br><br>
WO 01/45509 PCT/Us00/34605 <br><br>
as compared to 0.17 in ALT non-responders. A regression model was employed to examine the relationship between ALT response and Knodell score changes. This revealed that in all three studies ALT Response was a significant predictor of improvement in liver histology. Thus, ALT normalization or reduction correlates with improvement in liver histology in patients with hepatitis C treated with Ribavirin, and patients who achieve an ALT response are likely to derive a substantial clinical benefit. In patients treated with Ribavirin who do not achieve an ALT response, there does not appear to be any clinical benefit in comparison to patients who received placebo. <br><br>
Study <br><br>
CT00/002 <br><br>
92-001 <br><br>
91-DK-178 <br><br>
Combined <br><br>
Database <br><br>
Duration of treatment <br><br>
24 <br><br>
36 <br><br>
48 <br><br>
(week) <br><br>
Mean Knodell Change <br><br>
-1.23 <br><br>
-1.47 <br><br>
-4.09 <br><br>
-1.90 <br><br>
(Range) in ALT <br><br>
(-7.4) <br><br>
(-8.2) <br><br>
(-9.0) <br><br>
(-9.4) <br><br>
Responders* <br><br>
n = 26 <br><br>
n= 15 <br><br>
n= 11 <br><br>
n = 52 <br><br>
Mean Knodell Change <br><br>
-0.96 <br><br>
+0.58 <br><br>
-0.17 <br><br>
-0.36 <br><br>
(Range) in Non- <br><br>
(-9.4) <br><br>
(-3.6) <br><br>
(-6.7) <br><br>
(-9.7) <br><br>
Responders n = 25 <br><br>
n = 12 <br><br>
n= 18 <br><br>
n = 55 <br><br>
P-Value" <br><br>
0.004 <br><br>
0.0001 <br><br>
0.002 <br><br>
0.0001 <br><br>
Mean Knodell Change <br><br>
-1.10 <br><br>
-0.56 <br><br>
-1.65 <br><br>
-1.11 <br><br>
(Range) all Ribavirin <br><br>
(-9.4) <br><br>
(-8.6) <br><br>
(-9.7) <br><br>
(-9.7) <br><br>
Patients n = 51 <br><br>
n = 27 <br><br>
n = 29 <br><br>
n= 107 <br><br>
Mean Knodell Change <br><br>
-0.09 <br><br>
-+0.44 <br><br>
-0.52 <br><br>
-0.51 <br><br>
(Range) all Placebo <br><br>
(-4.4) <br><br>
(-3-5) <br><br>
(-8.4) <br><br>
(-8.5) <br><br>
Patients n = 23 <br><br>
n = 27 <br><br>
n = 27 <br><br>
n = 77 <br><br>
P-Value <br><br>
NS <br><br>
NS <br><br>
NS <br><br>
0.01 <br><br>
* ALT response was defined as normalization at the end of treatment or reduction of 50% or more from baseline to within 1.5 times the upper limit of normal at the end of treatment. <br><br>
Regression analysis <br><br>
Table 8 <br><br>
Thus, in summary, the phase IE program on Ribavirin in chronic hepatitis C consisted of three randomized, double blind, placebo-controlled, parallel group studies. 134 total patients were randomized to receive Ribavirin and 97 to receive placebo. Response to treatment was assessed using three parameters: <br><br>
1. Reduction or normalization of the ALT level (elevation of ALT is a biochemical marker of hepatic inflammation). <br><br>
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WO 01/45509 PCT/USOO/34605 <br><br>
2. Improvement in liver histology as evidenced by a reduction in the Knodell score (the Knodell scoring system quantifies the degree of liver damage by assigning scores to various relevant microscopic characteristics and summing these sub-scores to give a total score). <br><br>
3. Elimination of hepatitis C virus from the blood, or a reduction in the amount of virus 5 present. <br><br>
Of the 134 patients in the phase 111 studies, there were 101 with complete data on ALT levels, Knodell scores and virus levels. Among these 101 patients, 24 patients met the criteria for an optimal clinical response to Ribavirin therapy. The criteria are normalization or clinically significant reduction of the ALT level, and reduction in total Knodell score of two or more 10 points. For these 24 patients, the clinical response was obtained without an accompanying reduction in the virus level in the blood. Table 9 below summarizes the data on ALT levels and Knodell scores for the 24 responding patients as compared to the remaining 77 patients who demonstrated lesser degrees of response. <br><br>
Responders N=24 <br><br>
Non-Responders N=77 <br><br>
Mean baseline ALT (range) inU/L <br><br>
142.5 (52-269) <br><br>
176.9 (35-629) <br><br>
Mean end-of-treatment ALT (range)* U/L <br><br>
36.8 (21-62) <br><br>
91.7(13-286) <br><br>
Mean Knodell score reduction (range) <br><br>
4.1 (2-9) <br><br>
0.15 (-7 to+9) <br><br>
* upper limit or normal is 40 U/L <br><br>
15 Table 9 <br><br>
Thus, specific embodiments and applications of nucleosides, nucleotides, and their analogs have been disclosed. It should be apparent, however, to those skilled in the art that many more modifications besides those already described are possible without departing from the 20 inventive concepts herein. The inventive subject matter, therefore, is not to be restricted except in the spirit of the appended claims. Moreover, in interpreting both the specification and the claims; all terms should be interpreted in the broadest possible manner consistent with the context. In particular, the terms "comprises" and "comprising" should be interpreted as referring to elements, components, or steps in a non-exclusive manner, indicating that the referenced 25 elements, components, or steps may be present, or utilized, or combined with other elements, <br><br>
components, or steps that are not expressly referenced. <br><br>
39 <br><br>
WO 01/45509 <br><br>
What is claimed is: <br><br>
1. A compound having the structure: O <br><br>
PCT/USO0/34605 <br><br></p>
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