KR20220037944A - Phamaceutical composition for preventing or treating Coronavirus infectious disease comprising Coronavirus G-quadruplex ligands as an active ingredient - Google Patents
Phamaceutical composition for preventing or treating Coronavirus infectious disease comprising Coronavirus G-quadruplex ligands as an active ingredient Download PDFInfo
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Abstract
Description
본 발명은 코로나바이러스의 G4 구조에 결합하는 화합물을 포함하는 코로나바이러스 감염증 예방 또는 치료용 조성물 등에 관한 것이다.The present invention relates to a composition for preventing or treating a coronavirus infection comprising a compound that binds to the G4 structure of a coronavirus.
중국 우한을 중심으로 세계적으로 코로나바이러스감염증19(COVID-19) 대유행(pandemic)을 유발한 중증급성호흡기증후군 코로나바이러스2(SARS-CoV-2 또는 2019-nCoV)는 2021년 7월 20일 기준으로 190,877,071 명의 확진자를 발생시켰으며, 사망자도 4,095,650 명에 이르는 것으로 보고되었다. 이에 따라 전세계적으로 치료법과 예방법이 요구되고 있는 실정이다. Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2 or 2019-nCoV), which caused a global coronavirus infection 19 (COVID-19) pandemic, mainly in Wuhan, China, as of July 20, 2021 There were 190,877,071 confirmed cases, and 4,095,650 deaths were reported. Accordingly, there is a worldwide demand for treatment and prevention methods.
SARS-CoV-2(2019-nCoV)는 인체 세포 표면의 안지오텐신 전환효소 2(ACE2; angiotensin-converting enzyme 2)를 리셉터로 활용하여 침투하는 것으로 알려져 있다. ACE2 는 주로 폐, 동맥 혈관, 신장, 심장 및 소장 등에 널리 분포되어 있으며, 이에 따라 호흡기를 통하여 전파되며 Sever Acute Respiratory Syndrome(SARS) 를 유발하는 것으로 알려져 있다. SARS-CoV-2(2019-nCoV)의 경우 스파이크 단백질(spike(S) protein)이라고 불리는 스파이크 모양의 단백질의 여러 서브 유닛이 숙주 세포의 ACE2 와 작용하여 감염되는 것으로 이해된다. 현재 개발 중인 치료제는 대부분 바이러스의 스파이크 단백질, 단백질 가수분해 효소 또는 핵산 중합효소에 결합하는 저분자 물질을 이용해서 만든다. SARS-CoV-2 (2019-nCoV) is known to penetrate by using angiotensin-converting enzyme 2 (ACE2; angiotensin-converting enzyme 2) on the human cell surface as a receptor. ACE2 is mainly distributed widely in the lungs, arterial vessels, kidneys, heart, and small intestine, and thus spreads through the respiratory tract and is known to cause Sever Acute Respiratory Syndrome (SARS). In the case of SARS-CoV-2 (2019-nCoV), it is understood that several subunits of a spike-shaped protein called the spike(S) protein interact with ACE2 in the host cell to infect it. Most of the treatments currently under development are made using small-molecule substances that bind to viral spike proteins, proteolytic enzymes, or nucleic acid polymerases.
수많은 SARS-CoV-2 변종들이 COVID-19 대유행을 통해 전 세계적으로 출현하고 순환하고 있다. 이러한 변종들의 대부분은 N501Y, E484K 및 D614G 돌연변이와 같은 SARS-CoV-2 스파이크 단백질의 돌연변이를 나타낸다. 스파이크 단백질은 대부분의 코로나19 백신의 표적이지만 많은 변이체가 높은 전파율을 보이며 중화항체를 회피하는 능력을 갖고 있다. 바이러스 단백질을 표적으로 하는 예방 백신과 약물은 바이러스 감염을 퇴치하기 위한 기본적인 방법이지만, 동일한 바이러스 패밀리 내에서 보존되는 게놈 부위를 표적으로 하는 것이 새로운 항바이러스 요법을 개발할 수 있는 새로운 기회를 제공할 수 있다.Numerous SARS-CoV-2 strains are emerging and circulating around the world through the COVID-19 pandemic. Most of these variants represent mutations in the SARS-CoV-2 spike protein, such as the N501Y, E484K and D614G mutations. Although the spike protein is the target of most COVID-19 vaccines, many variants have high transmission rates and have the ability to evade neutralizing antibodies. Prophylactic vaccines and drugs that target viral proteins are fundamental methods to combat viral infections, but targeting regions of the genome that are conserved within the same virus family may provide new opportunities to develop novel antiviral therapies. .
세포 내의 DNA은 일반적으로 이중 나선 구조를 갖는데, 특정한 세포환경이나 세포작용 중에 다양한 구조를 갖는다는 것이 알려져 있다. 이러한 특수한 구조 중에 4가닥의 DNA 혹은 RNA가 만드는 4중 나선 구조가 잘 알려져 있는데, 이러한 구조를 G4(G-quadruplex) 혹은 G4 구조라고 부른다. G4 구조는 DNA 혹은 RNA 염기 중 구아닌이 연이어 있을 때 잘 만들어진다. DNA 가닥의 구아닌들이 결합해 사각 판 구조를 형성하고, 이러한 판이 연달아 쌓여 육면체 모양의 안정적인 매듭을 만든다. G4 구조는 유전자 발현이나 DNA 복제 혹은 단백질 번역 과정을 조절한다고 알려져 있다.DNA in a cell generally has a double helix structure, but it is known that it has a variety of structures during a specific cellular environment or cellular action. Among these special structures, a quadruple helix structure made by four strands of DNA or RNA is well known, and such a structure is called a G4 (G-quadruplex) or G4 structure. The G4 structure is well formed when guanines are consecutive in DNA or RNA bases. Guanines of DNA strands combine to form a square plate structure, and these plates are stacked one after another to form a stable hexahedral knot. The G4 structure is known to regulate gene expression, DNA replication, or protein translation processes.
이러한 배경 하에, 본 발명자들은 코로나바이러스에 존재하는 25개의 G4 구조를 대상으로 연구하던 중, 화합물과 결합에 의한 G4 구조의 안정화를 통해 코로나바이러스의 주요한 단백질 발현을 효과적으로 저해하고 바이러스의 세포 감염을 효과적으로 저해할 수 있음을 확인함으로써 본 발명을 완성하였다.Under this background, the present inventors effectively inhibited the expression of major proteins of the coronavirus through stabilization of the G4 structure by binding with a compound while studying 25 G4 structures present in the coronavirus and effectively inhibited cell infection of the virus By confirming that it can be inhibited, the present invention was completed.
본 발명자들은 코로나바이러스에 존재하는 25개의 G4 구조를 대상으로 연구하던 중, 화합물과 결합에 의한 코로나바이러스 G4 구조의 안정화를 통해 코로나바이러스의 주요한 단백질의 발현을 효과적으로 저해하고 바이러스의 세포 감염을 효과적으로 저해할 수 있음을 확인함으로써, 코로나바이러스 감염증 예방 또는 치료 효과를 확인한 바, 이에 기초하여 본 발명을 완성하였다.The present inventors effectively inhibited the expression of major proteins of the coronavirus and effectively inhibited viral cell infection through stabilization of the coronavirus G4 structure by binding with a compound while studying the 25 G4 structures present in the coronavirus By confirming that it can, the prevention or treatment effect of coronavirus infection was confirmed, and the present invention was completed based on this.
이에 본 발명의 목적은 코로나바이러스의 G4 구조에 결합하는 화합물 또는 이의 약학적으로 허용 가능한 염을 유효성분으로 포함하는, 코로나바이러스 감염증 예방 또는 치료용 약학적 조성물을 제공하는 것이다.Accordingly, it is an object of the present invention to provide a pharmaceutical composition for preventing or treating coronavirus infection, comprising a compound binding to the G4 structure of coronavirus or a pharmaceutically acceptable salt thereof as an active ingredient.
본 발명의 또 다른 목적은 코로나바이러스의 G4 구조에 결합하는 화합물 또는 이의 식품학적으로 허용 가능한 염을 유효성분으로 포함하는, 코로나바이러스 감염증 예방 또는 개선용 식품 조성물을 제공하는 것이다.Another object of the present invention is to provide a food composition for preventing or improving coronavirus infection, comprising as an active ingredient a compound binding to the G4 structure of the coronavirus or a pharmaceutically acceptable salt thereof.
본 발명의 또 다른 목적은 코로나바이러스의 G4 구조에 결합하는 화합물을 유효성분으로 포함하는, 코로나바이러스 감염증 예방 또는 억제용 의약외품 조성물을 제공하는 것이다.Another object of the present invention is to provide a quasi-drug composition for preventing or inhibiting coronavirus infection, comprising a compound that binds to the G4 structure of coronavirus as an active ingredient.
본 발명의 또 다른 목적은 코로나바이러스의 G4 구조에 결합하는 화합물을 유효성분으로 포함하는, 코로나바이러스에 대한 항바이러스용 조성물을 제공하는 것이다.Another object of the present invention is to provide an antiviral composition for coronavirus, comprising a compound that binds to the G4 structure of coronavirus as an active ingredient.
그러나, 본 발명이 이루고자 하는 기술적 과제는 이상에서 언급한 과제에 제한되지 않으며, 언급되지 않은 또 다른 과제들은 아래의 기재로부터 본 발명이 속하는 기술 분야의 통상의 지식을 가진 자에게 명확하게 이해될 수 있을 것이다.However, the technical task to be achieved by the present invention is not limited to the tasks mentioned above, and other tasks not mentioned may be clearly understood by those of ordinary skill in the art to which the present invention belongs from the description below. There will be.
상기 본 발명의 목적을 달성하기 위하여, 본 발명은 코로나바이러스의 G4 구조에 결합하는 화합물 또는 이의 약학적으로 허용 가능한 염을 유효성분으로 포함하는, 코로나바이러스 감염증 예방 또는 치료용 약학적 조성물을 제공한다.In order to achieve the object of the present invention, the present invention provides a pharmaceutical composition for preventing or treating coronavirus infection, comprising a compound binding to the G4 structure of coronavirus or a pharmaceutically acceptable salt thereof as an active ingredient .
또한, 코로나바이러스의 G4 구조에 결합하는 화합물 또는 이의 식품학적으로 허용 가능한 염을 유효성분으로 포함하는, 코로나바이러스 감염증 예방 또는 개선용 식품 조성물을 제공한다.In addition, it provides a food composition for preventing or improving coronavirus infection, comprising as an active ingredient a compound binding to the G4 structure of coronavirus or a pharmaceutically acceptable salt thereof.
또한, 본 발명은 코로나바이러스의 G4 구조에 결합하는 화합물을 유효성분으로 포함하는, 코로나바이러스 감염증 예방 또는 억제용 의약외품 조성물을 제공한다.In addition, the present invention provides a quasi-drug composition for preventing or inhibiting coronavirus infection, comprising a compound that binds to the G4 structure of coronavirus as an active ingredient.
또한, 본 발명은 코로나바이러스의 G4 구조에 결합하는 화합물을 유효성분으로 포함하는, 코로나바이러스에 대한 항바이러스용 조성물을 제공한다.In addition, the present invention provides an antiviral composition for coronavirus, comprising a compound that binds to the G4 structure of the coronavirus as an active ingredient.
또한, 본 발명은 상기 조성물을 개체에 투여하는 단계를 포함하는, 코로나바이러스 감염증의 예방 또는 치료방법을 제공한다. In addition, the present invention provides a method for preventing or treating a coronavirus infection, comprising administering the composition to an individual.
또한, 본 발명은 코로나바이러스의 G4 구조에 결합하는 화합물 또는 약학적으로 허용 가능한 염을 유효성분으로 포함하는 조성물의 코로나바이러스 감염증 예방 또는 치료용도를 제공한다. In addition, the present invention provides a use for preventing or treating coronavirus infection of a composition comprising a compound or pharmaceutically acceptable salt that binds to the G4 structure of coronavirus as an active ingredient.
또한, 본 발명은 코로나바이러스 감염증 예방 또는 치료 약제 제조를 위한 코로나바이러스의 G4 구조에 결합하는 화합물의 용도를 제공한다.The present invention also provides the use of a compound that binds to the G4 structure of a coronavirus for the manufacture of a medicament for the prevention or treatment of coronavirus infection.
본 발명의 일 구현예에서 상기 화합물은 하기 화학식 1 내지 화학식 7로 표시되는 화합물로 이루어진 군으로부터 선택된 하나 이상일 수 있으나, 이에 제한되는 것은 아니다.In one embodiment of the present invention, the compound may be at least one selected from the group consisting of compounds represented by the following
[화학식 1][Formula 1]
[화학식 2][Formula 2]
[화학식 3][Formula 3]
[화학식 4][Formula 4]
[화학식 5][Formula 5]
[화학식 6][Formula 6]
[화학식 7][Formula 7]
본 발명의 다른 구현예에서 상기 코로나바이러스는 인간 코로나바이러스 229E(HCoV-229E), 인간 코로나바이러스 OC43(HCoV-OC43), 중증급성호흡기증후군 코로나바이러스(SARS-CoV), 인간 코로나바이러스 NL63(HCoV-NL63, 뉴헤븐 코로나바이러스), 인간 코로나바이러스 HKU1, 중동호흡기증후군 코로나바이러스(MERS-CoV) 및 중증급성호흡기증후군 코로나바이러스 2(SARS-Cov-2)로 이루어지는 군에서 하나 이상 선택된 것일 수 있으나, 이에 제한되는 것은 아니다.In another embodiment of the present invention, the coronavirus is human coronavirus 229E (HCoV-229E), human coronavirus OC43 (HCoV-OC43), severe acute respiratory syndrome coronavirus (SARS-CoV), human coronavirus NL63 (HCoV-) NL63, New Heaven coronavirus), human coronavirus HKU1, Middle East Respiratory Syndrome Coronavirus (MERS-CoV), and severe acute respiratory syndrome coronavirus 2 (SARS-Cov-2) may be selected from the group consisting of at least one selected from the group consisting of, but It is not limited.
본 발명의 또 다른 구현예에서 상기 화합물은 코로나바이러스의 G4 구조를 안정화 시키는 것을 특징으로 할 수 있으나, 이에 제한되는 것은 아니다.In another embodiment of the present invention, the compound may be characterized in stabilizing the G4 structure of the coronavirus, but is not limited thereto.
본 발명의 또 다른 구현예에서 상기 화합물은 코로나바이러스 단백질 Nsp1(non-structural protein 1), Nsp3(non-structural protein 3), 및 뉴클레오캡시드로 이루어진 군으로부터 선택된 하나 이상의 단백질의 발현을 억제하는 것을 특징으로 할 수 있으나, 이에 제한되는 것은 아니다.In another embodiment of the present invention, the compound inhibits the expression of one or more proteins selected from the group consisting of coronavirus proteins Nsp1 (non-structural protein 1), Nsp3 (non-structural protein 3), and nucleocapsids. It may be characterized, but is not limited thereto.
본 발명의 또 다른 구현예에서 상기 화합물은 코로나바이러스 비리온 생산을 억제하는 것을 특징으로 할 수 있으나, 이에 제한되는 것은 아니다.In another embodiment of the present invention, the compound may be characterized in that it inhibits the production of coronavirus virions, but is not limited thereto.
본 발명의 또 다른 구현예에서 상기 의약외품은 소독청결제, 샤워폼, 가그린, 물티슈, 세제비누, 핸드워시 및 연고제로 이루어지는 군에서 선택된 하나 이상인 것을 특징으로 할 수 있으나, 이에 제한되는 것은 아니다.In another embodiment of the present invention, the quasi-drug may be characterized in that at least one selected from the group consisting of disinfectant cleaner, shower foam, gargrin, wet tissue, detergent soap, hand wash and ointment, but is not limited thereto.
본 발명에 따른 화합물은 코로나바이러스의 G4 구조에 결합해 G4 구조를 안정화 시키고 코로나바이러스의 단백질 발현을 감소시킬 뿐만 아니라 바이러스의 세포 감염을 효과적으로 저해할 수 있으므로, 이를 이용하여 코로나바이러스 감염증 예방 또는 치료에 사용할 수 있다.Since the compound according to the present invention binds to the G4 structure of the coronavirus to stabilize the G4 structure and reduce the protein expression of the coronavirus, as well as effectively inhibit virus cell infection, it can be used to prevent or treat coronavirus infection. can be used
도 1은 SARS-CoV-2의 유전자 및 G4의 분포를 나타낸 것이다.
도 2a 및 2b는 코로나바이러스에 존재하는 25개의 G4의 CD 스펙트럼을 나타낸 것이다. x축은 파장(nm), y축은 타원율(mdeg)을 나타낸 것이다.
도 3a 및 3b는 코로나바이러스에 존재하는 25개의 G4의 열 용융 곡선을 나타낸 것이다. x축은 파장(nm), y축은 정규화된 타원율(mdeg)을 나타낸 것이다.
도 4는 WT-G-353, WT-G-644 및 WT-G-3467과 Mut-G-353, Mut-G-644 및 Mut-G-3467의 CD 스펙트럼과 열 용융 곡선을 나타낸 것이다.
도 5a 및 5b는 코로나바이러스에 존재하는 25개의 G4의 CD 스펙트럼을 G4 결합 화합물 CX-3543, PDS 및 PhenDC3 결합 유무에 따라 나타낸 것이다.
도 6a 및 6b는 코로나바이러스에 존재하는 25개의 G4의 열 용융 곡선을 G4 결합 화합물 CX-3543, PDS 및 PhenDC3 결합 유무에 따라 나타낸 것이다.
도 7a는 HEK293T 세포에 PDS가 0.1, 0.5, 1, 2.5, 5.5, 7.5, 10, 25, 50, 75 μM 처리되었을 때 세포 생존율을 나타낸 것이다. x축은 농도(μM), y축은 생존율을 나타낸다.
도 7b는 Vero 세포에 PDS가 0.1, 0.5, 1, 2.5, 5.5, 7.5, 10, 25, 50, 75 μM 처리되었을 때 세포 생존율을 나타낸 것이다. x축은 농도(μM), y축은 생존율을 나타낸다.
도 7c는 HEK293T 세포에 PhenDC3가 0.1, 0.5, 1, 2.5, 5.5, 7.5, 10, 25, 50, 75 μM 처리되었을 때 세포 생존율을 나타낸 것이다. x축은 농도(μM), y축은 생존율을 나타낸다.
도 7d는 Vero 세포에 PhenDC3가 0.1, 0.5, 1, 2.5, 5.5, 7.5, 10, 25, 50, 75 μM 처리되었을 때 세포 생존율을 나타낸 것이다. x축은 농도(μM), y축은 생존율을 나타낸다.
도 8은 T7-WT-G-353, T7-WT-G-644, T7-WT-G-3467, T7-Mut-G-353, T7-Mut-G-644 및 T7-Mut-G-3467에 대해서 61, 63, 65, 67, 69℃에서 실행된 Gradient PCR 결과를 나타낸 것이다. M은 250bp 내지 10kb 범위의 1kb DNA 마커를 나타낸다.
도 9a 내지 9c는 N1-WT-G-353, N1-WT-G-644, N1-WT-G-3467에서 G4 결합 화합물 PDS가 5, 15, 25, 50 μM 처리되었을 때, IVT 분석 결과를 웨스턴 블롯의 밴드강도 그래프로 나타낸 것이다. x축은 농도(μM), y축은 밴드 강도를 나타낸다.
도 10a 내지 10c는 N1-WT-G-353, N1-WT-G-644, N1-WT-G-3467에서 G4 결합 화합물 PhenDC3가 5, 15, 25, 50 μM 처리되었을 때, IVT 분석 결과를 웨스턴 블롯의 밴드강도 그래프로 나타낸 것이다. x축은 농도(μM), y축은 밴드 강도를 나타낸다.
도 11a 내지 11b는 N1-WT-G-353, N1-WT-G-644, N1-WT-G-3467에서 G4 결합 화합물 PDS가 5, 10, 15, 20, 25, 50 μM 처리되었을 때, IVT 분석 결과를 웨스턴 블롯으로 나타낸 것이다.
도 11c는 N1-WT-G-3467에서 G4 결합 화합물 PDS가 5, 15, 25, 50 μM 처리되었을 때, IVT 분석 결과를 웨스턴 블롯으로 나타낸 것이다.
도 11d는 N1-Mut-G-3467에서 G4 결합 화합물 PDS가 5, 15 25, 50 μM 처리되었을 때, IVT 분석 결과를 웨스턴 블롯으로 나타낸 것이다.
도 12a 내지 12b는 N1-WT-G-353, N1-WT-G-644에서 G4 결합 화합물 PhenDC3가 5, 10, 15, 20, 25, 50 μM 처리되었을 때, IVT 분석 결과를 웨스턴 블롯으로 나타낸 것이다.
도 12c는 N1-WT-G-3467에서 G4 결합 화합물 PhenDC3가 5, 15, 25, 50 μM 처리되었을 때, IVT 분석 결과를 웨스턴 블롯으로 나타낸 것이다.
도 12d는 N1-Mut-G-3467에서 G4 결합 화합물 PhenDC3가 5, 15, 25, 50 μM 처리되었을 때, IVT 분석 결과를 웨스턴 블롯으로 나타낸 것이다.
도 13은 SARS-CoV-2에 감염된 Vero 세포내에서 N 단백질 발현에 대한 항바이러스 활성을 G4 결합 화합물 NMM, PDS, PhenDC3, BRACO19 농도에 따른 SARS-CoV-2 감염저해의 용량 반응 곡선 분석 결과로 나타낸 것이다. ●은 해당 화합물의 SARS-CoV-2 감염저해율(inhibition of infection)을 나타낸다. ■는 각 화합물의 세포 독성(cytotoxicity)으로, 각 웰의 세포수를 mock 그룹 웰들의 평균 세포수로 정규화하여 그래프에 ‘cell number to mock’으로 표기하였다.
도 14a는 SARS-CoV-2에 감염된 Vero 세포의 배양액에서 비리온 생산에 대한 항바이러스 활성을 G4 결합 화합물 PDS 농도에 따른 SARS-CoV-2의 감염저해의 용량 반응 곡선 분석 결과로 나타낸 것이다. x축은 농도(log μM), y축은 SARS-CoV-2의 감염 저해율(%)을 나타낸다.
도 14b는 SARS-CoV-2에 감염된 Vero 세포의 배양액에서 비리온 생산에 대한 항바이러스 활성을 G4 결합 화합물 PhenDC3 농도에 따른 SARS-CoV-2의 감염저해의 용량 반응 곡선 분석 결과로 나타낸 것이다. x축은 농도(log μM), y축은 SARS-CoV-2의 감염 저해율(%)을 나타낸다.
도 15는 SARS-CoV-2에 감염된 Vero 세포의 배양액에서 비리온 생산에 대한 항바이러스 활성을 G4 결합 화합물 NMM 농도에 따른 SARS-CoV-2의 감염저해의 용량 반응 곡선 분석 결과로 나타낸 것이다. x축은 농도(log μM), y축은 SARS-CoV-2의 감염 저해율(%)을 나타낸다.
도 16은 HCoV-OC43 바이러스에 감염된 HCT-8 세포의 배양액에서 비리온 생산에 대한 항바이러스 활성을 G4 결합 화합물 NMM, TMPyP2, TMPyP4, 또는 CX3543 농도에 따른 HCoV-OC43 바이러스의 감염저해의 용량 반응 곡선 분석 결과로 나타낸 것이다. x축은 농도(log μM), y축은 HCoV-OC43 바이러스의 감염 저해율(%)과 세포생존율(%)을 나타낸다. 도 16 내의 표는 각 G4 결합 화합물의 IC50 값을 나타낸다. 진한 빨간 색 ●은 HCT-8 세포에서의 각 화합물에 대한 세포독성으로, 각 화합물의 농도별 세포독성은 G4 결합 화합물 처리군을 DMSO 또는 증류수 대조군으로 정규화하여 그래프에 상대적인 세포생존율(%)으로 표기하였다.1 shows the distribution of genes and G4 of SARS-CoV-2.
Figures 2a and 2b show the CD spectra of 25 G4s present in coronavirus. The x-axis represents the wavelength (nm), and the y-axis represents the ellipticity (mdeg).
Figures 3a and 3b show the thermal melting curves of 25 G4s present in coronavirus. The x-axis shows the wavelength (nm), and the y-axis shows the normalized ellipticity (mdeg).
4 shows CD spectra and thermal melting curves of WT-G-353, WT-G-644 and WT-G-3467 and Mut-G-353, Mut-G-644 and Mut-G-3467.
5A and 5B show the CD spectra of 25 G4 present in coronavirus with or without G4 binding compounds CX-3543, PDS and PhenDC3 binding.
6A and 6B show the thermal melting curves of 25 G4 present in coronavirus with or without G4 binding compounds CX-3543, PDS and PhenDC3 binding.
Figure 7a shows the cell viability of HEK293T cells when PDS is treated with 0.1, 0.5, 1, 2.5, 5.5, 7.5, 10, 25, 50, 75 μM. The x-axis represents the concentration (μM), and the y-axis represents the survival rate.
Figure 7b shows the cell viability when Vero cells are treated with 0.1, 0.5, 1, 2.5, 5.5, 7.5, 10, 25, 50, 75 μM of PDS. The x-axis represents the concentration (μM), and the y-axis represents the survival rate.
Figure 7c shows the cell viability of HEK293T cells when PhenDC3 is treated with 0.1, 0.5, 1, 2.5, 5.5, 7.5, 10, 25, 50, 75 μM. The x-axis represents the concentration (μM), and the y-axis represents the survival rate.
Figure 7d shows the cell viability when Vero cells are treated with PhenDC3 0.1, 0.5, 1, 2.5, 5.5, 7.5, 10, 25, 50, 75 μM. The x-axis represents the concentration (μM), and the y-axis represents the survival rate.
8 shows T7-WT-G-353, T7-WT-G-644, T7-WT-G-3467, T7-Mut-G-353, T7-Mut-G-644 and T7-Mut-G-3467 shows the results of gradient PCR performed at 61, 63, 65, 67, and 69 ° C. M represents a 1 kb DNA marker ranging from 250 bp to 10 kb.
9a to 9c are IVT analysis results when treated with 5, 15, 25, 50 μM of G4 binding compound PDS in N1-WT-G-353, N1-WT-G-644, N1-WT-G-3467 It is shown as a graph of the band intensity of the Western blot. The x-axis represents the concentration (μM), and the y-axis represents the band intensity.
10a to 10c show IVT analysis results when the G4 binding compound PhenDC3 was treated with 5, 15, 25, 50 μM in N1-WT-G-353, N1-WT-G-644, N1-WT-G-3467. It is shown as a graph of the band intensity of the Western blot. The x-axis represents the concentration (μM), and the y-axis represents the band intensity.
Figures 11a to 11b show that in N1-WT-G-353, N1-WT-G-644, N1-WT-G-3467, when the G4 binding compound PDS was treated with 5, 10, 15, 20, 25, 50 μM, The results of the IVT analysis are shown as Western blots.
11c is a Western blot showing the results of IVT analysis when N1-WT-G-3467 was treated with 5, 15, 25, and 50 μM of the G4 binding compound PDS.
11D is a Western blot showing the results of IVT analysis when N1-Mut-G-3467 was treated with 5, 15 25, and 50 μM of the G4 binding compound PDS.
12A to 12B are Western blots showing the IVT analysis results when the G4-binding compound PhenDC3 was treated with 5, 10, 15, 20, 25, 50 μM in N1-WT-G-353 and N1-WT-G-644. will be.
12c is a Western blot showing the results of IVT analysis when N1-WT-G-3467 was treated with the G4-binding compound PhenDC3 at 5, 15, 25, and 50 μM.
12D is a Western blot showing the results of IVT analysis when N1-Mut-G-3467 was treated with the G4-binding compound PhenDC3 at 5, 15, 25, and 50 μM.
13 is a dose-response curve analysis of the antiviral activity against N protein expression in Vero cells infected with SARS-CoV-2 according to the concentrations of the G4 binding compounds NMM, PDS, PhenDC3, and BRACO19, and inhibition of SARS-CoV-2 infection. it has been shown ● indicates the SARS-CoV-2 inhibition of infection of the compound. ■ denotes the cytotoxicity of each compound, and the number of cells in each well was normalized to the average number of wells in the mock group and marked as 'cell number to mock' on the graph.
Figure 14a shows the antiviral activity against virion production in the culture medium of Vero cells infected with SARS-CoV-2 as a result of analyzing the dose-response curve of SARS-CoV-2 infection inhibition according to the PDS concentration of the G4-binding compound. The x-axis shows the concentration (log μM), and the y-axis shows the infection inhibition rate (%) of SARS-CoV-2.
Figure 14b shows the antiviral activity on virion production in the culture medium of Vero cells infected with SARS-CoV-2 as a result of analyzing the dose-response curve of SARS-CoV-2 infection inhibition according to the concentration of the G4-binding compound PhenDC3. The x-axis shows the concentration (log μM), and the y-axis shows the infection inhibition rate (%) of SARS-CoV-2.
15 shows the antiviral activity on virion production in the culture medium of Vero cells infected with SARS-CoV-2 as a result of analyzing the dose-response curve of SARS-CoV-2 infection inhibition according to the NMM concentration of the G4-binding compound. The x-axis shows the concentration (log μM), and the y-axis shows the infection inhibition rate (%) of SARS-CoV-2.
16 is a dose-response curve of HCoV-OC43 virus infection inhibition according to the concentration of the G4-binding compound NMM, TMPyP2, TMPyP4, or CX3543 for antiviral activity against virion production in a culture medium of HCT-8 cells infected with HCoV-OC43 virus. It is presented as an analysis result. The x-axis shows the concentration (log μM), and the y-axis shows the infection inhibition rate (%) and cell viability (%) of HCoV-OC43 virus. The table in FIG. 16 shows the IC 50 values of each G4 binding compound. Dark red ● indicates the cytotoxicity of each compound in HCT-8 cells, and the cytotoxicity by concentration of each compound is expressed as the relative cell viability (%) on the graph by normalizing the G4-binding compound treatment group to DMSO or distilled water control. did.
본 발명의 발명자들은 화합물이 코로나바이러스 G4 구조에 결합하여, G4 구조를 안정화시켜 코로나바이러스의 단백질 발현을 감소시킬 수 있음을 확인하여 본 발명을 완성하였다.The inventors of the present invention completed the present invention by confirming that the compound can reduce the protein expression of the coronavirus by binding to the coronavirus G4 structure and stabilizing the G4 structure.
본 발명의 일 실시예에서는 G4 결합 화합물 유무에 따른 CD 스펙트럼과 열 용융 곡선을 통해, 화합물 PhenDC3, PDS가 G4를 안정화시키는 것을 확인하였다(실시예 4 참조).In one embodiment of the present invention, it was confirmed that the compounds PhenDC3 and PDS stabilize G4 through the CD spectrum and the thermal melting curve according to the presence or absence of the G4 binding compound (see Example 4).
본 발명의 다른 실시예에서는 HEK293T 및 Vero 세포에서 화합물 PhenDC3, PDS의 세포 독성이 없음을 확인하였다(실시예 5 참조). In another example of the present invention, it was confirmed that there was no cytotoxicity of the compounds PhenDC3 and PDS in HEK293T and Vero cells (see Example 5).
본 발명의 다른 실시예에서는 IVT(In-Vitro transcriotion/trnaslation)분석을 통해 G4 결합 화합물 PDS 및 PhenDC3의 Nsp1 및 Nsp3 발현 억제를 확인하였다(실시예 7 참조).In another embodiment of the present invention, inhibition of Nsp1 and Nsp3 expression of the G4-binding compound PDS and PhenDC3 was confirmed through IVT (In-Vitro transcriotion/trnaslation) analysis (see Example 7).
본 발명의 다른 실시예에서는 SARS-CoV-2에 감염된 세포에서 G4 결합 화합물(NMM, PDS, PhenDC3, BRACO19)에 따른 N 단백질 발현에 대한 항바이러스 활성을 확인하였다(실시예 8 참조).In another embodiment of the present invention, antiviral activity against N protein expression according to G4 binding compounds (NMM, PDS, PhenDC3, BRACO19) in cells infected with SARS-CoV-2 was confirmed (see Example 8).
본 발명의 다른 실시예에서는 SARS-CoV-2에 감염된 세포에서 G4 결합 화합물(PDS, PhenDC3, NMM)에 따른 비리온 생산에 대한 항바이러스 활성을 확인하였다(실시예 9 참조).In another embodiment of the present invention, antiviral activity against virion production according to G4 binding compounds (PDS, PhenDC3, NMM) was confirmed in SARS-CoV-2 infected cells (see Example 9).
본 발명의 다른 실시예에서는 HCoV-OC43 바이러스에 감염된 세포에서 G4 결합 화합물(NMM, TMPyP2, TMPyP4, CX3543)에 따른 비리온 생산에 대한 항바이러스 활성을 확인하였다(실시예 10 참조).In another embodiment of the present invention, antiviral activity against virion production according to G4 binding compounds (NMM, TMPyP2, TMPyP4, CX3543) in cells infected with HCoV-OC43 virus was confirmed (see Example 10).
상기와 같은 실시예 결과를 통해 본 발명에 따른 화합물이 코로나바이러스 G4 구조를 안정화시키고, 코로나바이러스의 단백질 발현을 감소시키는 것을 확인하였는바, 화합물은 코로나바이러스 감염증의 예방 또는 치료 용도로 사용될 수 있다. It was confirmed that the compound according to the present invention stabilizes the coronavirus G4 structure and reduces the protein expression of the coronavirus through the results of Examples as described above, and the compound can be used for the prevention or treatment of coronavirus infection.
이하 본 발명에 대해 상세히 설명한다.Hereinafter, the present invention will be described in detail.
본 발명은 코로나바이러스의 G4 구조에 결합하는 화합물을 유효성분으로 포함하는, 코로나바이러스 감염증 예방 또는 치료용 약학적 조성물을 제공한다.The present invention provides a pharmaceutical composition for preventing or treating coronavirus infection, comprising a compound that binds to the G4 structure of coronavirus as an active ingredient.
본 발명에서, 상기 화합물은 하기 화학식 1 내지 화학식 7로 표시되는 화합물로 이루어진 군으로부터 선택된 하나 이상인 것을 특징으로 할 수 있으나, 이에 제한되는 것은 아니다.In the present invention, the compound may be characterized in that at least one selected from the group consisting of compounds represented by the following
[화학식 1][Formula 1]
[화학식 2][Formula 2]
[화학식 3][Formula 3]
[화학식 4][Formula 4]
[화학식 5][Formula 5]
[화학식 6][Formula 6]
[화학식 7][Formula 7]
본 발명에서, 상기 화학식 1의 화합물은 PhenDC3으로 명명될 수 있으며, 2-N,9-N-bis(1-methylquinolin-1-ium-3-yl)-1,10-phenanthroline-2,9-dicarboxamide의 IUPAC 네임을 가질 수 있다. 또한, 분자량은 550.6, 화학식은 C34H26N6O2 일 수 있다.In the present invention, the compound of
본 발명에서, 상기 화학식 2의 화합물은 Pyridostatin(PDS)으로 명명될 수 있으며, 4-(2-Aminoethoxy)-N2,N6-bis(4-(2-aminoethoxy)quinolin-2-yl)pyridine-2,6-dicarboxamide의 IUPAC 네임을 가질 수 있다. 또한, 분자량은 596.6, 화학식은 C31H32N8O5, 끓는점은 753.8±60.0℃, 인화점은 409.7±32.9℃ 일 수 있다.In the present invention, the compound of
본 발명에서, 상기 화학식 3의 화합물은 N-Methyl Mesoporphyrin IX (NMM9)으로 명명될 수 있으며, 3-[18-(2-carboxyethyl)-7,12-diethyl-3,8,13,17,22-pentamethyl-23H-porphyrin-2-yl]propanoic acid의 IUPAC 네임을 가질 수 있다. 또한, 분자량은 580.7, 화학식은 C35H40N4O4, 밀도는 1.26g/cm3 일 수 있다.In the present invention, the compound of
본 발명에서, 상기 화학식 4의 화합물은 BRACO-19로 명명될 수 있으며, N-[9-[4-(dimethylamino)anilino]-6-(3-pyrrolidin-1-ylpropanoylamino)acridin-3-yl]-3-pyrrolidin-1-ylpropanamide의 IUPAC 네임을 가질 수 있다. 또한 분자량은 593.8, 화학식은 C35H43N7O2, 끓는점은 854.95℃, 인화점은 470.857℃, 밀도는 1.275g/cm3 일 수 있다.In the present invention, the compound of
본 발명에서, 상기 화학식 5의 화합물은 TMPyP2로 명명될 수 있으며, 5,10,15,20-tetrakis(1-methylpyridin-1-ium-2-yl)-21,23-dihydroporphyrin의 IUPAC 네임을 가질 수 있다. 또한 분자량은 678.8, 화학식은 C44H38N8 4+ 일 수 있다.In the present invention, the compound of
본 발명에서, 상기 화학식 6의 화합물은 TMPyP4로 명명될 수 있으며, 5,10,15,20-tetrakis(1-methylpyridin-1-ium-4-yl)-21,23-dihydroporphyrin의 IUPAC 네임을 가질 수 있다. 또한, 분자량이 678.8, 화학식은 C44H38N8 4+일 수 있다.In the present invention, the compound of
본 발명에서, 상기 화학식 7의 화합물은 CX 3543으로 명명될 수 있으며 15-fluoro-N-[2-[(2S)-1-methylpyrrolidin-2-yl]ethyl]-18-oxo-14-(3-pyrazin-2-ylpyrrolidin-1-yl)-12-oxa-1-azapentacyclo[11.7.1.02,11.04,9.017,21]henicosa-2,4,6,8,10,13(21),14,16,19-nonaene-19-carboxamide의 IUPAC 네임을 가질 수 있다. 또한, 분자량이 604.673, 화학식은 C35H33FN6O3, 끓는점은 845.3±65.0℃ 일 수 있다.In the present invention, the compound of
본 발명에서, 상기 코로나바이러스는 중증급성호흡기증후군 코로나바이러스 2(SARS-Cov-2 또는 2019 novel coronavirus 또는 2019-nCoV)일 수 있으나, 이에 제한되지 않는다.In the present invention, the coronavirus may be severe acute respiratory syndrome coronavirus 2 (SARS-Cov-2 or 2019 novel coronavirus or 2019-nCoV), but is not limited thereto.
본 발명에서 사용된 용어, "코로나바이러스"는 니도바이러스목, 코로나바이러스과, 코로나바이러스아과 혹은 Torovirinae에 포함된 바이러스속인 종에 해당한다. 코로나바이러스는 +ssRNA와 나선형 대칭형 뉴클레오펩시드로 감싸진 바이러스이다. 또한, 중증급성호흡기증후군 코로나바이러스 2(SARS-CoV-2)는 지금까지 사람을 감염시키는 7번째 코로나바이러스이고, 나머지는 인간 코로나바이러스 229E(HCoV-229E), 인간 코로나바이러스 OC43(HCoV-OC43), 중증급성호흡기증후군 코로나바이러스(SARS-CoV), 인간 코로나바이러스 NL63(HCoV-NL63, 뉴헤븐 코로나바이러스), 인간 코로나바이러스 HKU1, 중동호흡기증후군 코로나바이러스(MERS-CoV) 이다. 코로나바이러스들의 전반적인 구조에 기여하는 단백질들은 스파이크, 외피 및 뉴클레오켑시드(Nucleocapsid)이다. SARS 코로나바이러스의 경우, 스파이크(spike(S)) 위에 있는 확정된 결합수용기 도메인이 바이러스의 부착부분을 이것의 세포 수용기인 안지오텐신 전환효소 2(ACE2)로 중재한다. 몇몇 코로나바이러스(특히, 베타코로나바이러스 하위집단 구성원)는 또한 항체 에스테라아제라고 불리는 단백질 같은 짧은 스파이크를 가진다. 코로나바이러스는 바이러스성 폐렴이나 2차적인 세균성 폐렴을 일으킬 수 있으며, 직접적인 바이러스성 기관지염이나 2차적인 세균성 기관지염도 일으킬 수 있다. 2003년에 발견된 인간 코로나바이러스는 중증급성호흡기증후군(SARS)를 일으키는 중증급성호흡기증후군 코로나바이러스(SARS-CoV)로, 상부 및 하부 호흡기 감염을 유발한다. As used herein, the term "coronavirus" corresponds to a species belonging to the genus of viruses included in the order Nidoviridae, Coronaviridae, Subfamily Coronavirae, or Torovirinae. Coronaviruses are viruses wrapped in +ssRNA and helically symmetrical nucleopepsids. In addition, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is the seventh coronavirus that infects humans so far, and the rest are human coronavirus 229E (HCoV-229E) and human coronavirus OC43 (HCoV-OC43). , severe acute respiratory syndrome coronavirus (SARS-CoV), human coronavirus NL63 (HCoV-NL63, New Haven coronavirus), human coronavirus HKU1, Middle East respiratory syndrome coronavirus (MERS-CoV). Proteins that contribute to the overall structure of coronaviruses are the spike, envelope and nucleocapsid. In the case of SARS coronavirus, an established bind receptor domain on the spike (S) mediates the attachment of the virus to its cellular receptor, angiotensin converting enzyme 2 (ACE2). Some coronaviruses (particularly members of the betacoronavirus subfamily) also have short spikes like proteins called antibody esterases. Coronaviruses can cause viral pneumonia or secondary bacterial pneumonia, as well as direct viral bronchitis or secondary bacterial bronchitis. The human coronavirus, discovered in 2003, is the severe acute respiratory syndrome coronavirus (SARS-CoV), which causes severe acute respiratory syndrome (SARS), which causes upper and lower respiratory tract infections.
또한, 본 발명에서 사용된 용어, "SARS-CoV-2" 또는 "2019-nCoV"는, 신종 코로나바이러스를 지칭하는 것으로서, RNA 바이러스로서 사스와 메르스의 변종을 나타낸다. SARS-CoV-2는 사스와 약 79.7%의 서열 동일성을, 메르스와 약 50%의 서열 동일성을 공유한다. 하지만, 사스와 메르스와는 대조적으로, 2019-nCoV의 spike glycoprotein은 1 개의 RBD domain이 위로 돌출된 형태의 구조를 형성하며, 이로 인해 타겟 리셉터(receptor)인 ACE2(angiotensin)와 100 내지 1,000배 더 강력한 결합력을 나타낸다. 이러한 강력한 결합력은 세포 내로 침투를 더욱 더 용이하게 하여 전염력을 높이는 원인으로 작용한다.In addition, the term "SARS-CoV-2" or "2019-nCoV" used in the present invention refers to a novel coronavirus, and refers to strains of SARS and MERS as RNA viruses. SARS-CoV-2 shares about 79.7% sequence identity with SARS and about 50% sequence identity with MERS. However, in contrast to SARS and MERS, the spike glycoprotein of 2019-nCoV forms a structure in which one RBD domain protrudes upward, resulting in 100 to 1,000 times more It shows strong bonding power. This strong binding force makes it easier to penetrate into the cell and acts as a cause to increase the infectious power.
본 발명에서, 상기 코로나바이러스 감염증은 코로나 바이러스 호흡기 감염 질환일 수 있다. 상기 바이러스성 호흡기 감염질환은 기침, 재채기, 두통, 코막힘, 인후통, 설사, 손가락 또는 발가락의 변색, 결막염, 고열, 천명, 기관지염, 세기관지염, 폐렴, 천식, 후각 및 미각 상실, 및 호흡기 부전 등의 증상을 나타낼 수 있다. 상기 코로나 바이러스가 중증급성호흡기증후군 코로나바이러스 2(SARS-Cov-2)인 경우에는, 발열과 호흡기 증상(기침, 인후통, 호흡곤란)을 주요 증상으로 하고, 이와 더불어 두통, 근육통, 객혈과 오심, 오한, 가슴 통증, 설사 등의 증상을 나타낼 수 있다. 또한, 상기 코로나바이러스감염증은 코로나바이러스감염증19(COVID-19)일 수 있다.In the present invention, the coronavirus infection may be a coronavirus respiratory infection disease. The viral respiratory infection diseases include cough, sneezing, headache, stuffy nose, sore throat, diarrhea, discoloration of fingers or toes, conjunctivitis, high fever, wheezing, bronchitis, bronchiolitis, pneumonia, asthma, loss of smell and taste, and respiratory failure. symptoms may be present. When the coronavirus is severe acute respiratory syndrome coronavirus 2 (SARS-Cov-2), fever and respiratory symptoms (cough, sore throat, dyspnea) are the main symptoms, along with headache, muscle pain, hemoptysis and nausea, Symptoms may include chills, chest pain, and diarrhea. In addition, the coronavirus infection may be coronavirus infection 19 (COVID-19).
본 발명에서, 상기 바이러스는 생존을 위하여 복제와 감염을 통해 게놈을 조정할 수 있다. 바이러스 RNA 게놈은 구조 도메인, 내부 리보솜 진입 부위(IRES), 폴리시스트론 mRNA, 중첩 판독 프레임 및 RNA 슈도노트 구조와 같은 다양한 영역을 보유하여 게놈의 발현 및 복제를 제어한다. 예를 들어, 게놈 RNA의 특정 영역이 안정적인 비정규 구조로 접히는 것은 바이러스 RNA 대사에 대한 장애물로 작용할 수 있다.In the present invention, the virus can modulate its genome through replication and infection for survival. The viral RNA genome possesses various regions such as structural domains, internal ribosome entry sites (IRES), polycistronic mRNAs, overlapping reading frames, and RNA pseudoknot structures to control expression and replication of the genome. For example, the folding of certain regions of genomic RNA into stable non-canonical structures can act as obstacles to viral RNA metabolism.
본 발명에서 사용된 용어, "스파이크(spike) 단백질" 또는 "S protein"은 코로나바이러스 표면 단백질을 지칭한다. As used herein, the term "spike protein" or "S protein" refers to a coronavirus surface protein.
본 발명에서 사용된 용어, “G4 구조” 또는 “G4(G-quadruplex)”는 구아닌(G, Guanine)이 풍부한 DNA 또는 RNA 서열에서 형성되는 4가닥의 핵산 2차 구조이다. G4 구조는 DNA와 RNA 바이러스 게놈 모두에 널리 분포되어 있다. 예를 들어, 엡스타인바 바이러스(EBV), 지카 바이러스(ZIKV), C형 간염 바이러스(HCV), 인유두종 바이러스(HPV), 인간 단순 포진 바이러스(HSV), 에볼라 바이러스, 인간 면역 결핍 바이러스-1(HIV-1), 인플루엔자 바이러스(H1N1) 및 인간 거대 세포 바이러스(HCMV)와 레트로바이러스 및 렌티바이러스의 긴 말단 반복 영역에서 발견되어 보고되었다. 최근 G4의 특이적인 항체와 화합물을 사용하여 얻은 전체 게놈과 전사체에 대한 생물정보학 분석에서 G4의 유전학적 위치가 밝혀졌다. DNA-G4는 텔로미어, 유사분열 및 감수분열의 이중가닥 절단 부위, 전사 개시 부위 및 복제 기점에서 중요한 역할을 한다. RNA-G4는 splicing, RNA 처리 및 수송에서 mRNA 번역에 이르기까지 RNA 대사의 많은 단계를 조정한다(Int. J. Mol. Sci. 2019, 20, 2884). As used herein, the term “G4 structure” or “G4 (G-quadruplex)” is a 4-stranded nucleic acid secondary structure formed from a DNA or RNA sequence rich in guanine (G, guanine). The G4 structure is widely distributed in both DNA and RNA virus genomes. For example, Epstein Barr Virus (EBV), Zika Virus (ZIKV), Hepatitis C Virus (HCV), Human Papilloma Virus (HPV), Human Herpes Simplex Virus (HSV), Ebola Virus, Human Immunodeficiency Virus-1 (HIV) -1), influenza virus (H1N1) and human cytomegalovirus (HCMV), as well as long terminal repeat regions of retroviruses and lentiviruses. Recently, bioinformatics analysis of whole genomes and transcripts obtained using G4 specific antibodies and compounds revealed the genetic location of G4. DNA-G4 plays an important role in telomeres, double-strand breaks in mitosis and meiosis, transcription initiation sites and origins of replication. RNA-G4 coordinates many steps of RNA metabolism, from splicing, RNA processing and transport, to mRNA translation (Int. J. Mol. Sci. 2019, 20, 2884).
본 발명에서, 상기 화합물은 G4를 안정화 시키는 물질일 수 있으나, 이에 제한되지 않는다. 예를 들어, 상기 Braco-19는 Nipah 바이러스에서 G4 harboring gene의 발현에 대한 억제 활성을 보여 바이러스 진입 및 복제를 중지하는 화합물이다. 또한, 상기 CX-3543은 유암종과 신경내분비종양에 대한 생체 내 임상 2상 시험을 통과한 유일한 G4 결합 화합물이다. 또한, 상기 PDS는 EBV, 가성 광견병 바이러스 및 헤르페스 바이러스 miRNA에서 보존된 G4를 안정화함으로써 유전자 발현을 감소시키는 것으로 알려져 있는 화합물이다. 또한, 상기 PhenDC3는 세포 독성 없이 세포에서 HCV 및 EBV 바이러스 복제를 억제하는 것으로 알려진 화합물이다.In the present invention, the compound may be a substance that stabilizes G4, but is not limited thereto. For example, the Braco-19 is a compound that stops virus entry and replication by showing inhibitory activity on the expression of the G4 harboring gene in Nipah virus. In addition, the CX-3543 is the only G4-binding compound that has passed the in
본 발명에서, 상기 화합물은 코로나바이러스 단백질 Nsp1(non-structural protein 1), Nsp3(non-structural protein 3)및 뉴클레오캡시드로 이루어진 군으로부터 선택된 하나 이상의 단백질의 발현을 억제하는 것을 특징으로 할 수 있으나, 이에 제한되는 것은 아니다.In the present invention, the compound may be characterized in that it inhibits the expression of one or more proteins selected from the group consisting of coronavirus proteins Nsp1 (non-structural protein 1), Nsp3 (non-structural protein 3), and nucleocapsid. , but is not limited thereto.
본 발명에서 사용된 용어, “Nsp1(non-structural protein 1)”은 바이러스 복제와 숙주 면역 반응을 방해하는 다양한 역할을 하는 가장 중요한 독성 인자이다. SARS-CoV-2에서 Nsp1은 540bp 길이의 RNA ORF(Opne reading frame)에 G4-353 및 G4-644를 포함한다. Nsp1은 주로 I형 인터페론 발현과 항바이러스 신호 전달 경로를 표적으로 하여 숙주 mRNA 번역을 억제하고 숙주의 선천성 면역 기능을 억제한다.As used herein, the term “Nsp1 (non-structural protein 1)” is the most important virulence factor that plays various roles in interfering with viral replication and host immune response. In SARS-CoV-2, Nsp1 contains G4-353 and G4-644 in an RNA open reading frame (ORF) with a length of 540 bp. Nsp1 mainly targets type I interferon expression and antiviral signaling pathways to inhibit host mRNA translation and suppress host innate immune function.
본 발명에서 사용된 용어, “Nsp3(non-structural protein 3)”는 다양한 기능을 가진 SARS-CoV-2에서 가장 큰 다중 도메인 유전자(5.83Kbp)이다. Nsp3-MAC1 도메인은 618 bp 이며 G4-3467을 포함한다. Nsp3-MAC1 도메인은 poly(ADP-ribose) polymerases (PARPs)에 의해 촉매되는 항바이러스성 de-ADPribosylating 활성을 통해 숙주의 선천성 면역에 대항한다. Nsp3-Mac1 도메인에 의한 STAT1의 de-mono-ADP-ribosylation이 COVID-19의 중증 사례에서 관찰되는 염증성 사이토카인 폭풍을 유발할 수 있다.As used herein, the term “Nsp3 (non-structural protein 3)” is the largest multi-domain gene (5.83 Kbp) in SARS-CoV-2 with various functions. The Nsp3-MAC1 domain is 618 bp and includes G4-3467. The Nsp3-MAC1 domain counteracts the host's innate immunity through antiviral de-ADPribosylating activity catalyzed by poly(ADP-ribose) polymerases (PARPs). De-mono-ADP-ribosylation of STAT1 by the Nsp3-Mac1 domain may trigger the inflammatory cytokine storm observed in severe cases of COVID-19.
본 발명에서 사용된 용어 “뉴클레오캡시드(Nucleocapsid(N))”는 코로나바이러스의 바이러스성 포장, 바이러스성 핵 생성, 바이러스 RNA를 합성하는데 중요한 역할을 한다. 구조 단백질의 하나로서 여러 기능을 하고 바이러스 생활 주기의 중요한 역할을 하는 단백질인바, 코로나바이러스를 억제하거나 검출할 수 있는 좋은 타겟이다.The term “nucleocapsid (N)” used in the present invention plays an important role in viral packaging of coronavirus, viral nucleation, and synthesizing viral RNA. As one of the structural proteins, it is a protein that has multiple functions and plays an important role in the viral life cycle, making it a good target for inhibiting or detecting coronavirus.
본 발명에 있어서, 상기 화합물은 코로나바이러스 비리온 생산을 억제하는 것을 특징으로 할 수 있으나, 이에 제한되는 것은 아니다.In the present invention, the compound may be characterized in that it inhibits the production of coronavirus virions, but is not limited thereto.
본 발명에서 사용된 용어 “비리온(Virion)”은 캡시드와 핵산으로 이루어진 온전한 형태의 바이러스 입자를 의미한다. 일반적으로 감염이 가능한 바이러스 입자(infectious virus particle)를 의미한다. 따라서 비리온의 생산은 바이러스 복제 원활성과 연관되어 있다.As used herein, the term “virion” refers to an intact viral particle composed of a capsid and a nucleic acid. In general, it refers to an infectious virus particle. Thus, the production of virions is associated with the smoothness of viral replication.
본 발명에 따른 약학적 조성물은 약학적 조성물의 제조에 통상적으로 사용하는 적절한 담체, 부형제 및 희석제를 더 포함할 수 있다. 상기 부형제는 예를 들어, 희석제, 결합제, 붕해제, 활택제, 흡착제, 보습제, 필름-코팅 물질, 및 제어방출첨가제로 이루어진 군으로부터 선택된 하나 이상일 수 있다. The pharmaceutical composition according to the present invention may further include suitable carriers, excipients and diluents commonly used in the preparation of pharmaceutical compositions. The excipient may be, for example, at least one selected from the group consisting of a diluent, a binder, a disintegrant, a lubricant, an adsorbent, a humectant, a film-coating material, and a controlled-release additive.
본 발명에 따른 약학적 조성물은, 각각 통상의 방법에 따라 산제, 과립제, 서방형 과립제, 장용과립제, 액제, 점안제, 엘실릭제, 유제, 현탁액제, 주정제, 트로키제, 방향수제, 리모나아데제, 정제, 서방형정제, 장용정제, 설하정, 경질캅셀제, 연질캅셀제, 서방캅셀제, 장용캅셀제, 환제, 틴크제, 연조엑스제, 건조엑스제, 유동엑스제, 주사제, 캡슐제, 관류액, 경고제, 로션제, 파스타제, 분무제, 흡입제, 패취제, 멸균주사용액, 또는에어로졸 등의 외용제 등의 형태로 제형화하여 사용될 수 있으며, 상기 외용제는 크림, 젤, 패치, 분무제, 연고제, 경고제, 로션제, 리니멘트제, 파스타제 또는 카타플라스마제 등의 제형을 가질 수 있다.The pharmaceutical composition according to the present invention can be prepared according to a conventional method, respectively, in powders, granules, sustained-release granules, enteric granules, liquids, eye drops, elsilic, emulsions, suspensions, alcohols, troches, fragrances, and limonaade. , tablets, sustained release tablets, enteric tablets, sublingual tablets, hard capsules, soft capsules, sustained release capsules, enteric capsules, pills, tinctures, soft extracts, dry extracts, fluid extracts, injections, capsules, perfusates, Warnings, lotions, pasta, sprays, inhalants, patches, sterile injection solutions, or external preparations such as aerosols can be formulated and used, and the external preparations are creams, gels, patches, sprays, ointments, warning agents , lotion, liniment, pasta, or cataplasma.
본 발명에 따른 약학적 조성물에 포함될 수 있는 담체, 부형제 및 희석제로는 락토즈, 덱스트로즈, 수크로스, 올리고당, 솔비톨, 만니톨, 자일리톨, 에리스리톨, 말티톨, 전분, 아카시아 고무, 알지네이트, 젤라틴, 칼슘 포스페이트, 칼슘 실리케이트, 셀룰로즈, 메틸 셀룰로오스, 미정질 셀룰로오스, 폴리비닐 피롤리돈, 물, 메틸히드록시벤조에이트, 프로필히드록시벤조에이트, 탈크, 마그네슘 스테아레이트 및 광물유를 들 수 있다. Carriers, excipients and diluents that may be included in the pharmaceutical composition according to the present invention include lactose, dextrose, sucrose, oligosaccharide, sorbitol, mannitol, xylitol, erythritol, maltitol, starch, gum acacia, alginate, gelatin, calcium phosphate, calcium silicate, cellulose, methyl cellulose, microcrystalline cellulose, polyvinyl pyrrolidone, water, methylhydroxybenzoate, propylhydroxybenzoate, talc, magnesium stearate and mineral oil.
제제화할 경우에는 보통 사용하는 충진제, 증량제, 결합제, 습윤제, 붕해제, 계면활성제 등의 희석제 또는 부형제를 사용하여 조제된다. In the case of formulation, it is prepared using commonly used diluents or excipients such as fillers, extenders, binders, wetting agents, disintegrants, and surfactants.
본 발명에 따른 정제, 산제, 과립제, 캡슐제, 환제, 트로키제의 첨가제로 옥수수전분, 감자전분, 밀전분, 유당, 백당, 포도당, 과당, 디-만니톨, 침강탄산칼슘, 합성규산알루미늄, 인산일수소칼슘, 황산칼슘, 염화나트륨, 탄산수소나트륨, 정제 라놀린, 미결정셀룰로오스, 덱스트린, 알긴산나트륨, 메칠셀룰로오스, 카르복시메칠셀룰로오스나트륨, 카올린, 요소, 콜로이드성실리카겔, 히드록시프로필스타치, 히드록시프로필메칠셀룰로오스(HPMC) 1928, HPMC 2208, HPMC 2906, HPMC 2910, 프로필렌글리콜, 카제인, 젖산칼슘, 프리모젤 등 부형제; 젤라틴, 아라비아고무, 에탄올, 한천가루, 초산프탈산셀룰로오스, 카르복시메칠셀룰로오스, 카르복시메칠셀룰로오스칼슘, 포도당, 정제수, 카제인나트륨, 글리세린, 스테아린산, 카르복시메칠셀룰로오스나트륨, 메칠셀룰로오스나트륨, 메칠셀룰로오스, 미결정셀룰로오스, 덱스트린, 히드록시셀룰로오스, 히드록시프로필스타치, 히드록시메칠셀룰로오스, 정제쉘락, 전분호, 히드록시프로필셀룰로오스, 히드록시프로필메칠셀룰로오스, 폴리비닐알코올, 폴리비닐피롤리돈 등의 결합제가 사용될 수 있으며, 히드록시프로필메칠셀룰로오스, 옥수수전분, 한천가루, 메칠셀룰로오스, 벤토나이트, 히드록시프로필스타치, 카르복시메칠셀룰로오스나트륨, 알긴산나트륨, 카르복시메칠셀룰로오스칼슘, 구연산칼슘, 라우릴황산나트륨, 무수규산, 1-히드록시프로필셀룰로오스, 덱스트란, 이온교환수지, 초산폴리비닐, 포름알데히드처리 카제인 및 젤라틴, 알긴산, 아밀로오스, 구아르고무(Guar gum), 중조, 폴리비닐피롤리돈, 인산칼슘, 겔화전분, 아라비아고무, 아밀로펙틴, 펙틴, 폴리인산나트륨, 에칠셀룰로오스, 백당, 규산마그네슘알루미늄, 디-소르비톨액, 경질무수규산 등 붕해제; 스테아린산칼슘, 스테아린산마그네슘, 스테아린산, 수소화식물유(Hydrogenated vegetable oil), 탈크, 석송자, 카올린, 바셀린, 스테아린산나트륨, 카카오지, 살리실산나트륨, 살리실산마그네슘, 폴리에칠렌글리콜 4000, 폴리에칠렌글리콜 6000, 유동파라핀, 수소첨가대두유(Lubri wax), 스테아린산알루미늄, 스테아린산아연, 라우릴황산나트륨, 산화마그네슘, 마크로골(Macrogol), 합성규산알루미늄, 무수규산, 고급지방산, 고급알코올, 실리콘유, 파라핀유, 폴리에칠렌글리콜지방산에테르, 전분, 염화나트륨, 초산나트륨, 올레인산나트륨, dl-로이신, 경질무수규산 등의 활택제;가 사용될 수 있다.Corn starch, potato starch, wheat starch, lactose, sucrose, glucose, fructose, di-mannitol, precipitated calcium carbonate, synthetic aluminum silicate, phosphoric acid as additives for tablets, powders, granules, capsules, pills, and troches according to the present invention Calcium monohydrogen, calcium sulfate, sodium chloride, sodium hydrogen carbonate, purified lanolin, microcrystalline cellulose, dextrin, sodium alginate, methyl cellulose, sodium carboxymethyl cellulose, kaolin, urea, colloidal silica gel, hydroxypropyl starch, hydroxypropyl methyl Cellulose (HPMC) 1928, HPMC 2208, HPMC 2906, HPMC 2910, propylene glycol, casein, calcium lactate, excipients such as Primogel; Gelatin, gum arabic, ethanol, agar powder, cellulose acetate phthalate, carboxymethylcellulose, calcium carboxymethylcellulose, glucose, purified water, sodium caseinate, glycerin, stearic acid, sodium carboxymethylcellulose, sodium methylcellulose, methylcellulose, microcrystalline cellulose, dextrin , hydroxycellulose, hydroxypropyl starch, hydroxymethylcellulose, purified shellac, starch powder, hydroxypropylcellulose, hydroxypropylmethylcellulose, polyvinyl alcohol, polyvinylpyrrolidone, etc. Hydroxypropyl methylcellulose, corn starch, agar powder, methylcellulose, bentonite, hydroxypropyl starch, sodium carboxymethylcellulose, sodium alginate, calcium carboxymethylcellulose, calcium citrate, sodium lauryl sulfate, silicic anhydride, 1-hydroxy Propyl cellulose, dextran, ion exchange resin, polyvinyl acetate, formaldehyde treated casein and gelatin, alginic acid, amylose, guar gum, sodium bicarbonate, polyvinylpyrrolidone, calcium phosphate, gelled starch, gum arabic, Disintegrants such as amylopectin, pectin, sodium polyphosphate, ethyl cellulose, sucrose, magnesium aluminum silicate, di-sorbitol solution, light anhydrous silicic acid; Calcium stearate, magnesium stearate, stearic acid, hydrogenated vegetable oil, talc, lycopodite, kaolin, petrolatum, sodium stearate, cacao fat, sodium salicylate, magnesium salicylate, polyethylene glycol 4000, polyethylene glycol 6000, liquid paraffin, hydrogenated soybean oil (Lubri wax), aluminum stearate, zinc stearate, sodium lauryl sulfate, magnesium oxide, macrogol, synthetic aluminum silicate, silicic anhydride, higher fatty acids, higher alcohols, silicone oil, paraffin oil, polyethylene glycol fatty acid ether, starch, A lubricant such as sodium chloride, sodium acetate, sodium oleate, dl-leucine, light silicic anhydride; may be used.
본 발명에 따른 액제의 첨가제로는 물, 묽은 염산, 묽은 황산, 구연산나트륨, 모노스테아린산슈크로스류, 폴리옥시에칠렌소르비톨지방산에스텔류(트윈에스텔), 폴리옥시에칠렌모노알킬에텔류, 라놀린에텔류, 라놀린에스텔류, 초산, 염산, 암모니아수, 탄산암모늄, 수산화칼륨, 수산화나트륨, 프롤아민, 폴리비닐피롤리돈, 에칠셀룰로오스, 카르복시메칠셀룰로오스나트륨 등이 사용될 수 있다.As additives for the liquid formulation according to the present invention, water, diluted hydrochloric acid, diluted sulfuric acid, sodium citrate, monostearate sucrose, polyoxyethylene sorbitol fatty acid esters (Twinester), polyoxyethylene monoalkyl ethers, lanolin ethers, Lanolin esters, acetic acid, hydrochloric acid, aqueous ammonia, ammonium carbonate, potassium hydroxide, sodium hydroxide, prolamine, polyvinylpyrrolidone, ethyl cellulose, sodium carboxymethyl cellulose, etc. can be used.
본 발명에 따른 시럽제에는 백당의 용액, 다른 당류 혹은 감미제 등이 사용될 수 있으며, 필요에 따라 방향제, 착색제, 보존제, 안정제, 현탁화제, 유화제, 점조제 등이 사용될 수 있다.In the syrup according to the present invention, a sucrose solution, other sugars or sweeteners may be used, and if necessary, a fragrance, colorant, preservative, stabilizer, suspending agent, emulsifying agent, thickening agent, etc. may be used.
본 발명에 따른 유제에는 정제수가 사용될 수 있으며, 필요에 따라 유화제, 보존제, 안정제, 방향제 등이 사용될 수 있다.Purified water may be used in the emulsion according to the present invention, and if necessary, an emulsifier, preservative, stabilizer, fragrance, etc. may be used.
본 발명에 따른 현탁제에는 아카시아, 트라가칸타, 메칠셀룰로오스, 카르복시메칠셀룰로오스, 카르복시메칠셀룰로오스나트륨, 미결정셀룰로오스, 알긴산나트륨, 히드록시프로필메칠셀룰로오스, HPMC 1828, HPMC 2906, HPMC 2910 등 현탁화제가 사용될 수 있으며, 필요에 따라 계면활성제, 보존제, 안정제, 착색제, 방향제가 사용될 수 있다.Suspending agents such as acacia, tragacantha, methylcellulose, carboxymethylcellulose, sodium carboxymethylcellulose, microcrystalline cellulose, sodium alginate, hydroxypropylmethylcellulose, HPMC 1828, HPMC 2906, HPMC 2910 may be used in the suspending agent according to the present invention. and, if necessary, surfactants, preservatives, stabilizers, colorants, and fragrances may be used.
본 발명에 따른 주사제에는 주사용 증류수, 0.9%염화나트륨주사액, 링겔주사액, 덱스트로스주사액, 덱스트로스+염화나트륨주사액, 피이지(PEG), 락테이티드 링겔주사액, 에탄올, 프로필렌글리콜, 비휘발성유-참기름, 면실유, 낙화생유, 콩기름, 옥수수기름, 올레인산에칠, 미리스트산 이소프로필, 안식향산벤젠과 같은 용제; 안식향산나트륨, 살리실산나트륨, 초산나트륨, 요소, 우레탄, 모노에칠아세트아마이드, 부타졸리딘, 프로필렌글리콜, 트윈류, 니정틴산아미드, 헥사민, 디메칠아세트아마이드와 같은 용해보조제; 약산 및 그 염(초산과 초산나트륨), 약염기 및 그 염(암모니아 및 초산암모니움), 유기화합물, 단백질, 알부민, 펩톤, 검류와 같은 완충제; 염화나트륨과 같은 등장화제; 중아황산나트륨(NaHSO3), 이산화탄소가스, 메타중아황산나트륨(Na2S2O5), 아황산나트륨(Na2SO3), 질소가스(N2), 에칠렌디아민테트라초산과 같은 안정제; 소디움비설파이드 0.1%, 소디움포름알데히드 설폭실레이트, 치오우레아, 에칠렌디아민테트라초산디나트륨, 아세톤소디움비설파이트와 같은 황산화제; 벤질알코올, 클로로부탄올, 염산프로카인, 포도당, 글루콘산칼슘과 같은 무통화제; 시엠시나트륨, 알긴산나트륨, 트윈 80, 모노스테아린산알루미늄과 같은 현탁화제를 포함할 수 있다.The injection according to the present invention includes distilled water for injection, 0.9% sodium chloride injection solution, ring gel injection solution, dextrose injection solution, dextrose + sodium chloride injection solution, PEG (PEG), lactated ring gel injection solution, ethanol, propylene glycol, non-volatile oil-sesame oil , solvents such as cottonseed oil, peanut oil, soybean oil, corn oil, ethyl oleate, isopropyl myristate, and benzene benzoate; Solubilizing aids such as sodium benzoate, sodium salicylate, sodium acetate, urea, urethane, monoethylacetamide, butazolidine, propylene glycol, tweens, nijeongtinamide, hexamine, and dimethylacetamide; Weak acids and their salts (acetic acid and sodium acetate), weak bases and their salts (ammonia and ammonium acetate), organic compounds, proteins, buffers such as albumin, peptone and gum; isotonic agents such as sodium chloride; Stabilizers such as sodium bisulfite (NaHSO 3 ), carbon dioxide gas, sodium metabisulfite (Na 2 S 2 O 5 ), sodium sulfite (Na 2 SO 3 ), nitrogen gas (N 2 ), ethylenediaminetetraacetic acid; sulphating agents such as sodium bisulfide 0.1%, sodium formaldehyde sulfoxylate, thiourea, disodium ethylenediaminetetraacetate, acetone sodium bisulfite; analgesic agents such as benzyl alcohol, chlorobutanol, procaine hydrochloride, glucose, and calcium gluconate; suspending agents such as SiMC sodium, sodium alginate, Tween 80, or aluminum monostearate.
본 발명에 따른 좌제에는 카카오지, 라놀린, 위텝솔, 폴리에틸렌글리콜, 글리세로젤라틴, 메칠셀룰로오스, 카르복시메칠셀룰로오스, 스테아린산과 올레인산의 혼합물, 수바날(Subanal), 면실유, 낙화생유, 야자유, 카카오버터+콜레스테롤, 레시틴, 라네트왁스, 모노스테아린산글리세롤, 트윈 또는 스판, 임하우젠(Imhausen), 모놀렌(모노스테아린산프로필렌글리콜), 글리세린, 아뎁스솔리두스(Adeps solidus), 부티룸 태고-G(Buytyrum Tego-G), 세베스파마 16 (Cebes Pharma 16), 헥사라이드베이스 95, 코토마(Cotomar), 히드록코테 SP, S-70-XXA, S-70-XX75(S-70-XX95), 히드록코테(Hydrokote) 25, 히드록코테 711, 이드로포스탈 (Idropostal), 마사에스트라리움(Massa estrarium, A, AS, B, C, D, E, I, T), 마사-MF, 마수폴, 마수폴-15, 네오수포스탈-엔, 파라마운드-B, 수포시로(OSI, OSIX, A, B, C, D, H, L), 좌제기제 IV 타입 (AB, B, A, BC, BBG, E, BGF, C, D, 299), 수포스탈 (N, Es), 웨코비 (W, R, S, M ,Fs), 테제스터 트리글리세라이드 기제 (TG-95, MA, 57)와 같은 기제가 사용될 수 있다.The suppository according to the present invention includes cacao fat, lanolin, witepsol, polyethylene glycol, glycerogelatin, methyl cellulose, carboxymethyl cellulose, a mixture of stearic acid and oleic acid, Subanal, cottonseed oil, peanut oil, palm oil, cacao butter + Cholesterol, Lecithin, Lanet Wax, Glycerol Monostearate, Tween or Span, Imhausen, Monolene (Propylene Glycol Monostearate), Glycerin, Adeps Solidus, Butyrum Tego -G),
경구 투여를 위한 고형제제에는 정제, 환제, 산제, 과립제, 캡슐제 등이 포함되며, 이러한 고형제제는 상기 추출물에 적어도 하나 이상의 부형제 예를 들면, 전분, 칼슘카보네이트(calcium carbonate), 수크로스(sucrose) 또는 락토오스(lactose), 젤라틴 등을 섞어 조제된다. 또한 단순한 부형제 이외에 마그네슘 스티레이트 탈크 같은 윤활제들도 사용된다. Solid preparations for oral administration include tablets, pills, powders, granules, capsules, etc., and these solid preparations include at least one excipient in the extract, for example, starch, calcium carbonate, sucrose ) or lactose, gelatin, etc. In addition to simple excipients, lubricants such as magnesium stearate and talc are also used.
경구 투여를 위한 액상제제로는 현탁제, 내용액제, 유제, 시럽제 등이 해당되는데 흔히 사용되는 단순희석제인 물, 리퀴드 파라핀 이외에 여러 가지 부형제, 예를 들면 습윤제, 감미제, 방향제, 보존제 등이 포함될 수 있다. 비경구 투여를 위한 제제에는 멸균된 수용액, 비수성용제, 현탁제, 유제, 동결건조제제, 좌제가 포함된다. 비수성용제, 현탁제로는 프로필렌글리콜 (propylene glycol), 폴리에틸렌 글리콜, 올리브 오일과 같은 식물성 기름, 에틸올레이트와 같은 주사 가능한 에스테르 등이 사용될 수 있다. Liquid formulations for oral administration include suspensions, internal solutions, emulsions, syrups, etc. In addition to water and liquid paraffin, which are commonly used simple diluents, various excipients such as wetting agents, sweeteners, fragrances, and preservatives may be included. there is. Formulations for parenteral administration include sterile aqueous solutions, non-aqueous solutions, suspensions, emulsions, freeze-dried preparations, and suppositories. Non-aqueous solvents and suspending agents include propylene glycol, polyethylene glycol, vegetable oils such as olive oil, and injectable esters such as ethyl oleate.
본 발명에 따른 약학적 조성물은 약학적으로 유효한 양으로 투여한다. 본 발명에 있어서, "약학적으로 유효한 양"은 의학적 치료에 적용 가능한 합리적인 수혜/위험 비율로 질환을 치료하기에 충분한 양을 의미하며, 유효용량 수준은 환자 질환의 종류, 중증도, 약물의 활성, 약물에 대한 민감도, 투여 시간, 투여 경로 및 배출비율, 치료기간, 동시 사용되는 약물을 포함한 요소 및 기타 의학 분야에 잘 알려진 요소에 따라 결정될 수 있다. The pharmaceutical composition according to the present invention is administered in a pharmaceutically effective amount. In the present invention, "pharmaceutically effective amount" means an amount sufficient to treat a disease at a reasonable benefit/risk ratio applicable to medical treatment, and the effective dose level is determined by the type, severity, drug activity, and type of the patient's disease; Sensitivity to the drug, administration time, administration route and excretion rate, treatment period, factors including concurrent drugs and other factors well known in the medical field may be determined.
본 발명에 따른 약학적 조성물은 개별 치료제로 투여하거나 다른 치료제와 병용하여 투여될 수 있고 종래의 치료제와는 순차적 또는 동시에 투여될 수 있으며, 단일 또는 다중 투여될 수 있다. 상기한 요소들을 모두 고려하여 부작용 없이 최소한의 양으로 최대 효과를 얻을 수 있는 양을 투여하는 것이 중요하며, 이는 본 발명이 속하는 기술분야에 통상의 기술자에 의해 용이하게 결정될 수 있다.The pharmaceutical composition according to the present invention may be administered as an individual therapeutic agent or may be administered in combination with other therapeutic agents, may be administered sequentially or simultaneously with conventional therapeutic agents, and may be administered singly or multiple times. In consideration of all of the above factors, it is important to administer an amount capable of obtaining the maximum effect with a minimum amount without side effects, which can be easily determined by a person skilled in the art to which the present invention pertains.
본 발명의 약학적 조성물은 개체에게 다양한 경로로 투여될 수 있다. 투여의 모든 방식은 예상될 수 있는데, 예를 들면, 경구 복용, 피하 주사, 복강 투여, 정맥 주사, 근육 주사, 척수 주위 공간(경막내) 주사, 설하 투여, 볼점막 투여, 직장 내 삽입, 질 내 삽입, 안구 투여, 귀 투여, 비강 투여, 흡입, 입 또는 코를 통한 분무, 피부 투여, 경피 투여 등에 따라 투여될 수 있다.The pharmaceutical composition of the present invention may be administered to an individual by various routes. All modes of administration can be contemplated, for example, oral administration, subcutaneous injection, intraperitoneal administration, intravenous injection, intramuscular injection, paraspinal space (intrathecal) injection, sublingual administration, buccal administration, rectal insertion, vaginal It can be administered according to internal insertion, ocular administration, ear administration, nasal administration, inhalation, spraying through the mouth or nose, skin administration, transdermal administration, and the like.
본 발명의 약학적 조성물은 치료할 질환, 투여 경로, 환자의 연령, 성별, 체중 및 질환의 중등도 등의 여러 관련 인자와 함께 활성성분인 약물의 종류에 따라 결정된다.The pharmaceutical composition of the present invention is determined according to the type of drug as an active ingredient along with several related factors such as the disease to be treated, the route of administration, the patient's age, sex, weight, and the severity of the disease.
본 발명에서 “개체”란 질병의 치료를 필요로 하는 대상을 의미하고, 보다 구체적으로는 인간 또는 비-인간인 영장류, 생쥐 (mouse), 쥐 (rat), 개, 고양이, 말, 및 소 등의 포유류를 의미한다.In the present invention, "individual" means a subject in need of treatment for a disease, and more specifically, human or non-human primates, mice, rats, dogs, cats, horses, cattle, etc. means the mammals of
본 발명에서 “투여”란 임의의 적절한 방법으로 개체에게 소정의 본 발명의 조성물을 제공하는 것을 의미한다.본 발명에서 “예방”이란 목적하는 질환의 발병을 억제하거나 지연시키는 모든 행위를 의미하고, “치료”란 본 발명에 따른 약학적 조성물의 투여에 의해 목적하는 질환과 그에 따른 대사 이상 증세가 호전되거나 이롭게 변경되는 모든 행위를 의미하며, “개선”이란 본 발명에 따른 조성물의 투여에 의해 목적하는 질환과 관련된 파라미터, 예를 들면 증상의 정도를 감소시키는 모든 행위를 의미한다. In the present invention, "administration" means providing a predetermined composition of the present invention to an individual by any suitable method. In the present invention, "prevention" means any action that inhibits or delays the onset of a desired disease, "Treatment" means any action in which a desired disease and metabolic abnormalities are improved or changed beneficially by administration of the pharmaceutical composition according to the present invention, and "improvement" refers to the purpose of It refers to any action that reduces the disease-related parameters, for example, the severity of symptoms.
또한, 코로나바이러스의 G4 구조에 결합하는 화합물 또는 이의 식품학적으로 허용 가능한 염을 유효성분으로 포함하는, 코로나바이러스 감염증 예방 또는 개선용 식품 조성물을 제공한다.In addition, it provides a food composition for preventing or improving coronavirus infection, comprising as an active ingredient a compound binding to the G4 structure of coronavirus or a pharmaceutically acceptable salt thereof.
본 발명의 코로나바이러스의 G4 구조에 결합하는 화합물을 식품 첨가물로 사용할 경우, 상기 화합물을 그대로 첨가하거나 다른 식품 또는 식품 성분과 함께 사용할 수 있고, 통상적인 방법에 따라 적절하게 사용할 수 있다. 유효성분의 혼합양은 사용 목적(예방, 건강 또는 치료적 처치)에 따라 적합하게 결정될 수 있다. 일반적으로, 식품 또는 음료의 제조시 본 발명의 화합물은 원료에 대하여 15 중량% 이하, 또는 10 중량% 이하의 양으로 첨가될 수 있다. 그러나, 건강 및 위생을 목적으로 하거나 또는 건강 조절을 목적으로 하는 장기간의 섭취의 경우 상기 양은 상기 범위 이하일 수 있으며, 안전성 면에서 아무런 문제가 없기 때문에 유효성분은 상기 범위 이상의 양으로도 사용될 수 있다.When the compound binding to the G4 structure of the coronavirus of the present invention is used as a food additive, the compound may be added as it is or used together with other foods or food ingredients, and may be appropriately used according to a conventional method. The mixed amount of the active ingredient may be appropriately determined according to the purpose of use (prevention, health or therapeutic treatment). In general, in the production of food or beverage, the compound of the present invention may be added in an amount of 15% by weight or less, or 10% by weight or less based on the raw material. However, in the case of long-term intake for health and hygiene or health control, the amount may be less than the above range, and since there is no problem in terms of safety, the active ingredient may be used in an amount greater than the above range.
상기 식품의 종류에는 특별한 제한은 없다. 상기 물질을 첨가할 수 있는 식품의 예로는 육류, 소세지, 빵, 쵸코렛, 캔디류, 스넥류, 과자류, 피자, 라면, 기타 면류, 껌류, 아이스크림류를 포함한 낙농제품, 각종 스프, 음료수, 차, 드링크제, 알콜 음료 및 비타민 복합제 등이 있으며, 통상적인 의미에서의 건강기능식품을 모두 포함한다.There is no particular limitation on the type of the food. Examples of foods to which the above substances can be added include meat, sausage, bread, chocolate, candy, snacks, confectionery, pizza, ramen, other noodles, gums, dairy products including ice cream, various soups, beverages, tea, drinks, There are alcoholic beverages and vitamin complexes, and includes all health functional foods in the ordinary sense.
본 발명에 따른 건강음료 조성물은 통상의 음료와 같이 여러 가지 향미제 또는 천연 탄수화물 등을 추가 성분으로서 함유할 수 있다. 상술한 천연 탄수화물은 포도당 및 과당과 같은 모노사카라이드, 말토오스 및 수크로오스와 같은 디사카라이드, 덱스트린 및 시클로덱스트린과 같은 폴리사카라이드, 및 자일리톨, 소르비톨 및 에리트리톨 등의 당알콜이다. 감미제로서는 타우마틴, 스테비아 추출물과 같은 천연 감미제나, 사카린, 아스파르탐과 같은 합성 감미제 등을 사용할 수 있다. 상기 천연 탄수화물의 비율은 본 발명의 조성물 100 mL당 일반적으로 약 0.01-0.20g, 또는 약 0.04-0.10g 이다.The health beverage composition according to the present invention may contain various flavoring agents or natural carbohydrates as additional ingredients, as in a conventional beverage. The above-mentioned natural carbohydrates are monosaccharides such as glucose and fructose, disaccharides such as maltose and sucrose, polysaccharides such as dextrin and cyclodextrin, and sugar alcohols such as xylitol, sorbitol and erythritol. As the sweetener, natural sweeteners such as taumartin and stevia extract, synthetic sweeteners such as saccharin and aspartame, and the like can be used. The proportion of the natural carbohydrate is generally about 0.01-0.20 g, or about 0.04-0.10 g per 100 mL of the composition of the present invention.
상기 외에 본 발명의 조성물은 여러 가지 영양제, 비타민, 전해질, 풍미제, 착색제, 펙트산 및 그의 염, 알긴산 및 그의 염, 유기산, 보호성 콜로이드 증점제, pH 조절제, 안정화제, 방부제, 글리세린, 알콜, 탄산 음료에 사용되는 탄산화제 등을 함유할 수 있다. 그 밖에 본 발명의 조성물은 천연 과일쥬스, 과일쥬스 음료 및 야채 음료의 제조를 위한 과육을 함유할 수 있다. 이러한 성분은 독립적으로 또는 조합하여 사용할 수 있다. 이러한 첨가제의 비율은 크게 중요하진 않지만 본 발명의 조성물 100 중량부 당 0.01-0.20 중량부의 범위에서 선택되는 것이 일반적이다.In addition to the above, the composition of the present invention includes various nutrients, vitamins, electrolytes, flavoring agents, coloring agents, pectic acid and its salts, alginic acid and its salts, organic acids, protective colloidal thickeners, pH adjusters, stabilizers, preservatives, glycerin, alcohol, Carbonating agents used in carbonated beverages, etc. may be contained. In addition, the composition of the present invention may contain the pulp for the production of natural fruit juice, fruit juice beverage, and vegetable beverage. These components may be used independently or in combination. The proportion of these additives is not critical, but is generally selected in the range of 0.01-0.20 parts by weight per 100 parts by weight of the composition of the present invention.
본 발명은 코로나바이러스의 G4 구조에 결합하는 화합물을 유효성분으로 포함하는, 코로나바이러스 감염증 예방 또는 억제용 의약외품 조성물을 제공한다.The present invention provides a quasi-drug composition for preventing or inhibiting coronavirus infection, comprising a compound that binds to the G4 structure of coronavirus as an active ingredient.
본 발명에 따른 "코로나바이러스 감염증 예방 또는 억제용 의약외품 조성물"에 있어서, 의약외품은 약사법 제2조 제7호 다목에 기재된 감염병 예방을 위하여 살균ㆍ살충 및 이와 유사한 용도로 사용되는 제제로서, 사람 또는 동물의 보건을 위해 사용되는 파리, 모기 등의 기피제, 구제제, 방지제, 방제제 또는 유인살충제를 의미할 수 있다.In the "quasi-drug composition for preventing or suppressing coronavirus infection" according to the present invention, the quasi-drug is a preparation used for sterilization, insecticide, and similar uses for the prevention of infectious diseases described in
또한, 상기 의약외품은 피부외용제 및 개인위생용품을 포함할 수 있다. 예를 들어, 소독청결제, 샤워폼, 가그린, 물티슈, 세제비누, 핸드워시, 또는 연고제일 수 있으나 이에 제한되지는 않는다.In addition, the quasi-drugs may include external preparations for skin and personal care products. For example, it may be a disinfectant cleaner, shower foam, gargrin, wet tissue, detergent soap, hand wash, or ointment, but is not limited thereto.
본 발명에 따른 상기 의약외품 조성물을 의약외품 첨가물로 사용할 경우, 상기 조성물을 그대로 첨가하거나 다른 의약외품 또는 의약외품 성분과 함께 사용 할 수 있고, 통상적인 방법에 따라 적절하게 사용할 수 있다. 유효성분의 혼합량은 사용 목적에 따라 적합하게 결정될 수 있다.When the quasi-drug composition according to the present invention is used as a quasi-drug additive, the composition may be added as it is or used together with other quasi-drugs or quasi-drug ingredients, and may be appropriately used according to a conventional method. The mixing amount of the active ingredient may be suitably determined according to the purpose of use.
본 발명의 의약외품 조성물은 일 예로, 일반적인 유화 제형 및 가용화 제형의 형태로 제조된 것일 수 있다. 예를 들어, 로션 등과 같은 유액, 크림, 연고, 스프레이, 오일젤, 젤, 오일, 에어로졸, 연막제와 같은 제형을 가질 수 있으나, 본 발명의 해충 방제 유도 효과를 나타내는 것이라면 제한되지 않고 사용할 수 있다. 또한 상기 의약외품 조성물은 각각의 제형에 일반적으로 의약외품 조성물에 배합되는 유분, 물, 계면활성제, 보습제, 탄소수 1 내지 4의 저급 알코올, 증점제, 킬레이트제, 색소, 방부제 또는 향료 등을 필요에 따라 적절히 배합하여 사용할 수 있다.The quasi-drug composition of the present invention may be prepared in the form of, for example, a general emulsified formulation and a solubilized formulation. For example, it may have formulations such as emulsions, creams, ointments, sprays, oil gels, gels, oils, aerosols, and smokers such as lotions, but is not limited as long as it exhibits the pest control inducing effect of the present invention. . In addition, in the quasi-drug composition, oil, water, surfactant, humectant, lower alcohol having 1 to 4 carbon atoms, thickener, chelating agent, pigment, preservative or fragrance, etc., which are generally formulated in quasi-drug composition in each formulation, are appropriately blended as needed. can be used by
본 발명은 코로나바이러스의 G4 구조에 결합하는 화합물을 유효성분으로 포함하는, 코로나바이러스에 대한 항바이러스용 조성물을 제공한다.The present invention provides a composition for antiviral against coronavirus, comprising a compound that binds to the G4 structure of coronavirus as an active ingredient.
본 발명에 있어서, “항바이러스”는 체내에서 바이러스의 증식을 억제하여 체내에 침입한 바이러스의 작용을 약하게 하거나 소멸하게 하는 것을 의미하며, 보다 상세하게는 바이러스의 핵산 합성과정, 유전자 발현 과정, 또는 바이러스 복제 과정 등을 저해함으로써 바이러스의 증식을 억제하는 것을 의미하고, 본 발명에서는 코로나바이러스를 대상으로 한다In the present invention, "antiviral" means to weaken or eliminate the action of a virus that invades the body by inhibiting the proliferation of the virus in the body, and more specifically, the nucleic acid synthesis process of the virus, the gene expression process, or It means to inhibit the proliferation of a virus by inhibiting the viral replication process, etc., and the present invention targets a coronavirus
본 발명에 있어서, 상기 항바이러스용 조성물은 인간 코로나바이러스 229E(HCoV-229E), 인간 코로나바이러스 OC43(HCoV-OC43), 중증급성호흡기증후군 코로나바이러스(SARS-CoV), 인간 코로나바이러스 NL63(HCoV-NL63, 뉴헤븐 코로나바이러스), 인간 코로나바이러스 HKU1, 중동호흡기증후군 코로나바이러스(MERS-CoV) 및 중증급성호흡기증후군 코로나바이러스 2(SARS-Cov-2 또는 2019 novel coronavirus 또는 2019-nCoV)에 대한 항바이러스 활성을 가질 수 있다.In the present invention, the antiviral composition is human coronavirus 229E (HCoV-229E), human coronavirus OC43 (HCoV-OC43), severe acute respiratory syndrome coronavirus (SARS-CoV), human coronavirus NL63 (HCoV- Antiviral against NL63, New Haven coronavirus), human coronavirus HKU1, Middle East Respiratory Syndrome Coronavirus (MERS-CoV) and Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-Cov-2 or 2019 novel coronavirus or 2019-nCoV) may have activity.
본 발명에서 사용되는 용어는 본 발명에서의 기능을 고려하면서 가능한 현재 널리 사용되는 일반적인 용어들을 선택하였으나, 이는 당 분야에 종사하는 기술자의 의도 또는 판례, 새로운 기술의 출현 등에 따라 달라질 수 있다. 또한, 특정한 경우는 출원인이 임의로 선정한 용어도 있으며, 이 경우 해당되는 발명의 설명 부분에서 상세히 그 의미를 기재할 것이다. 따라서 본 발명에서 사용되는 용어는 단순한 용어의 명칭이 아닌, 그 용어가 가지는 의미와 본 발명의 전반에 걸친 내용을 토대로 정의되어야 한다.The terms used in the present invention have been selected as currently widely used general terms as possible while considering the functions in the present invention, but these may vary depending on the intention or precedent of a person skilled in the art, the emergence of new technology, and the like. In addition, in a specific case, there is a term arbitrarily selected by the applicant, and in this case, the meaning will be described in detail in the description of the corresponding invention. Therefore, the term used in the present invention should be defined based on the meaning of the term and the overall content of the present invention, rather than the name of a simple term.
이하, 본 발명의 이해를 돕기 위하여 바람직한 실시예를 제시한다. 그러나 하기의 실시예는 본 발명을 보다 쉽게 이해하기 위하여 제공되는 것일 뿐, 하기 실시예에 의해 본 발명의 내용이 한정되는 것은 아니다.Hereinafter, preferred examples are presented to help the understanding of the present invention. However, the following examples are only provided for easier understanding of the present invention, and the contents of the present invention are not limited by the following examples.
[실험방법][Test method]
1. 올리고뉴크레오타이드의 제작1. Preparation of oligonucleotides
제조사의 프로토콜에 따라 200 μl의 뉴클레아제가 없는 물에 RNA 올리고뉴클레오타이드(Bioneer,Korea)를 녹여 100 μM의 원액을 준비하였다. 본 발명에 사용된 RNA G4 올리고뉴클레오타이드는 하기 표 1에 나타냈다.According to the manufacturer's protocol, a 100 μM stock solution was prepared by dissolving RNA oligonucleotides (Bioneer, Korea) in 200 μl of nuclease-free water. The RNA G4 oligonucleotides used in the present invention are shown in Table 1 below.
2. 원편광 이색성(CD) 스펙트럼 측정2. Circular dichroism (CD) spectral measurement
RNA 올리고뉴클레오타이드 15μM를 Thermoblock에서 10mM Tris-HCl(pH 7.5) 및 100mM KCl을 포함하는 완충액에서 어닐링 하였다(95°C에서 10분 동안 변성 후 4°C까지 0.5°C/분으로 냉각). 실험을 수행하기 전에 샘플을 4°C에서 밤새 보관하였다. CD 스펙트럼은 1mm 석영 큐벳을 사용하고, 20°C, 100nm/min의 스캔 속도, 1nm의 데이터 피치 및 1nm의 대역폭으로 하여 220~320nm 파장 사이에서 측정되었다. 또한, 각 스펙트럼은 3회 측정하고 평균을 나타내었다. CD 실험은 Jasco CDC-426F Peltier 온도 컨트롤러가 장착된 Jasco J-810 CD 분광편광계에서 수행되었다.15 µM of RNA oligonucleotides were annealed in a buffer containing 10 mM Tris-HCl (pH 7.5) and 100 mM KCl in a thermoblock (denatured at 95 °C for 10 min followed by cooling at 0.5 °C/min to 4 °C). Samples were stored overnight at 4 °C prior to performing the experiment. CD spectra were measured between 220 and 320 nm wavelength using a 1 mm quartz cuvette, at 20 °C, a scan rate of 100 nm/min, a data pitch of 1 nm, and a bandwidth of 1 nm. In addition, each spectrum was measured three times and averaged. CD experiments were performed on a Jasco J-810 CD spectropolarimeter equipped with a Jasco CDC-426F Peltier temperature controller.
3. CD 열 용융 분석3. CD Thermal Melting Analysis
CD 용융을 위해 샘플은 2℃/분 및 0.5℃의 데이터 피치로 25-95℃에서 가열되었다. CD 용융 분석은 G4 결합 화합물의 유무를 달리하여 수행되었다. RNA:G4 결합 화합물의 비율은 1:2의 몰비로 하였다. RNA G4 15μM에 G4 결합 화합물 30μM를 처리하여 30분 동안 실온으로 10mM Tris-HCl(pH 7.5) 및 100mM KCl을 포함하는 완충액에서 인큐베이션하였다. 타원율은 265 nm에서 측정하였다. 그 후, 데이터를 정규화하고 OriginPro 2017에 플롯하여 Tm 값을 계산하였다.For CD melting the samples were heated at 25-95°C with a data pitch of 2°C/min and 0.5°C. CD melting assays were performed with and without G4 binding compounds. The ratio of RNA:G4-binding compound was set to a molar ratio of 1:2. 15 μM of RNA G4 was treated with 30 μM of G4 binding compound and incubated in a buffer containing 10 mM Tris-HCl (pH 7.5) and 100 mM KCl at room temperature for 30 minutes. The ellipticity was measured at 265 nm. The data were then normalized and plotted in OriginPro 2017 to calculate Tm values.
4. 세포 배양4. Cell Culture
인간 배아 신장(HEK293T) 세포 및 Vero 세포는 10% 소태아혈청(FBS) 및 1% 페니실린-스트렙토마이신(penicillin-streptomycin)이 보충된 고 포도당 둘베코수정이글배지(DMEM ;high-glucose Dulbecco’s Modified Eagle’s Medium)에서 유지되었고, 37°C, 5% CO2하에 가습 인큐베이터에서 배양하였다. Human embryonic kidney (HEK293T) cells and Vero cells were cultured in high-glucose Dulbecco's Modified Eagle's Medium (DMEM) supplemented with 10% fetal bovine serum (FBS) and 1% penicillin-streptomycin. Medium) and incubated in a humidified incubator at 37 °C, 5% CO 2 .
5. 시험관 내(in vitro) 발현을 위한 peYFP-N1 리포터 벡터의 제작5. Construction of peYFP-N1 reporter vector for in vitro expression
pEYFP-N1 리포터(Promega) 벡터는 eYFP 융합 단백질을 인코딩하기 위해 eYFP 코딩 영역과 프레임 내 표적 유전자(WT-G4-353, 644, 3467)를 클로닝하여 생성되었다. PCR 증폭 클로닝에 사용되는 프라이머는 하기 표 2에 나타내었다. WT G4-353, 644, 3467에 대한 표적 유전자 삽입물은 PUC-GW-Amp(공여자 플라스미드)(Cosmogenetech)에 의해 합성되었고, 수용 플라스미드 pEYFP-N1 벡터의 Xho1/BamH1 제한 부위 사이로 서브 클로닝 된 다음, 컴피턴트 E. coli DH5α 세포로 형질전환 시켰다. 명명된 재조합 플라스미드(N1-WT-G4-353, 644 및 3467)를 각각 시퀀싱으로 확인하였다.The pEYFP-N1 reporter (Promega) vector was generated by cloning the eYFP coding region and in-frame target genes (WT-G4-353, 644, 3467) to encode the eYFP fusion protein. Primers used for PCR amplification cloning are shown in Table 2 below. Target gene inserts for WT G4-353, 644, 3467 were synthesized by PUC-GW-Amp (donor plasmid) (Cosmogenetech), subcloned between the Xho1/BamH1 restriction sites of the recipient plasmid pEYFP-N1 vector, and then It was transformed into tant E. coli DH5α cells. The named recombinant plasmids (N1-WT-G4-353, 644 and 3467) were confirmed by sequencing, respectively.
6. 위치 지정 돌연변이 유발6. Site-Directed Mutagenesis
G4-353, G4-644, G4-3467 내에 G4 형성을 방해하는 위치 지정 돌연변이를 도입하기 위해 QuikChange site-directed mutagenesis의 프로토콜(Stratagene)에 따라 PCR 반응을 수행하였다. 돌연변이 유발에 사용되는 프라이머는 상기 표 2에 나타내었다. 돌연변이 유발 후, 야생형 벡터 골격은 Dpnl으로 37℃에서 밤새 분해되고 DH5α 컴피턴트 세포로 형질전환 시켰다. 얻은 양성 클론은 시퀀싱에 의해 확인되었다. 명명된 돌연변이 G4 플라스미드(N1-Mut-G4-353, 644 및 3467)는 시퀀싱으로 확인하였다.A PCR reaction was performed according to the protocol (Stratagene) of QuikChange site-directed mutagenesis to introduce site-directed mutations disrupting G4 formation in G4-353, G4-644, and G4-3467. Primers used for mutagenesis are shown in Table 2 above. After mutagenesis, the wild-type vector backbone was digested with Dpnl overnight at 37°C and transformed into DH5α competent cells. The obtained positive clone was confirmed by sequencing. The named mutant G4 plasmids (N1-Mut-G4-353, 644 and 3467) were confirmed by sequencing.
7. 천연 폴리아크릴아미드 겔 전기영동7. Natural polyacrylamide gel electrophoresis
천연 폴리아크릴아미드 겔 전기영동은 50 mM KCl을 포함하는 1X TBE 완충액에서 15% 폴리아크릴아미드 겔에 대해 3시간 동안 80V, 4℃로 수행되었다. 겔은 SYBR Gold 핵산 염료로 염색하고 Bio-Rad Gel Doc UV-트랜스일루미네이터로 관찰하였다.Native polyacrylamide gel electrophoresis was performed on 15% polyacrylamide gel in 1X TBE buffer containing 50 mM KCl at 80V, 4°C for 3 hours. The gel was stained with SYBR Gold nucleic acid dye and observed with a Bio-Rad Gel Doc UV-transilluminator.
8. 세포 생존율 분석 8. Cell viability assay
세포독성은 EZ Cytox assay kit(DogenBio, Korea)를 이용하여 분석하였다. HEK293T 및 Vero 세포를 100 ㎕/웰의 배지 부피에서 2x104 세포/웰의 밀도로 96웰-플레이트에 넣고 37℃에서 24시간 동안 배양하였다. 24시간 후, 세포를 다양한 농도의 G4 결합 화합물(0.1, 0.5, 1, 2.5, 5.5, 7.5, 10, 25, 50, 75 μM)을 처리하고 37℃에서 24시간 또는 48시간 동안 배양하였다. 세포 생존율(%)은 455 nm에서의 흡광도 값을 측정하고(Luminescence multi-mode microplate reader Synergy™ Neo2) 하기 식 1을 사용하여 계산하였다. 모든 실험은 3중으로 수행되었으며 화합물이 처리되지 않은 세포를 대조군으로 사용하였다. EZ Cytox 시약이 있는 DMEM를 blank로 사용하였다.Cytotoxicity was analyzed using the EZ Cytox assay kit (DogenBio, Korea). HEK293T and Vero cells were placed in a 96-well-plate at a density of 2×10 4 cells/well in a medium volume of 100 μl/well and incubated at 37° C. for 24 hours. After 24 hours, cells were treated with various concentrations of G4 binding compounds (0.1, 0.5, 1, 2.5, 5.5, 7.5, 10, 25, 50, 75 μM) and incubated at 37°C for 24 or 48 hours. Cell viability (%) was calculated by measuring the absorbance value at 455 nm (Luminescence multi-mode microplate reader Synergy™ Neo2) using
[식 1][Equation 1]
세포 생존율(%) = [(A455(시험 시료) - A455(Blank)) /(A455(대조 시료) - A455(Blank))]*100Cell viability (%) = [(A 455 (test sample) - A 455 (Blank) ) /(A 455 (control sample) - A 455 (Blank) )]*100
9. 세포 형질감염9. Cell Transfection
제조사의 프로토콜(TurboFect™ Transfection Reagent, Invitrogen, USA)에 따라 HEK293T 및 Vero 세포에서 형질감염을 수행하였다. 1.5×105 세포 또는 7.5×104 세포를 6 웰-플레이트 안 2ml DMEM 배지에 각각 넣고 37℃에서 배양하였다. 24시간 후 제조업체의 지침에 따라 형질감염 하였다. 10시간 후, G4 결합 화합물이 있거나 없는 배지로 교체하여 화합물을 처리하였다. 그 후, 24 또는 48시간 동안 세포를 배양하였고, 추가 실험을 위하여 세포를 채취하였다.Transfection was performed in HEK293T and Vero cells according to the manufacturer's protocol (TurboFect™ Transfection Reagent, Invitrogen, USA). 1.5×10 5 cells or 7.5×10 4 cells were placed in 2ml DMEM medium in a 6 well-plate, respectively, and incubated at 37°C. After 24 hours, transfection was carried out according to the manufacturer's instructions. After 10 hours, the compounds were treated by replacing the medium with or without G4 binding compound. Thereafter, the cells were cultured for 24 or 48 hours, and the cells were harvested for further experiments.
10. IVT(In-Vitro transcription/translation) 분석10. In-Vitro transcription/translation (IVT) analysis
WT-G4 및 Mut-G4 서열을 T7 프로모터 부위로 설계된 특정 프라이머에 의해 PCR 증폭시켰다. PCR 산물은 1Kbp 이하의 길이로, T7 프로모터 부위와 eGFP 유전자를 포함하였다. IVT에 사용되는 프라이머는 상기 표 2에 나타내었다. PCR 산물은 TNT® Quick Coupled Transcription/Translation System(Promega)을 이용하여 전사 및 번역되었으며, PCR-DNA 주형(0.5㎍)은 1 mM 메티오닌을 포함하는 50㎕ 반응 혼합물에서 90분 동안 30℃로 번역되었다. 번역된 산물은 12% SDS-PAGE를 사용하여 용해하고 웨스턴 블롯으로 분석하였다.The WT-G4 and Mut-G4 sequences were PCR amplified with specific primers designed with the T7 promoter region. The PCR product was 1Kbp or less in length, and included the T7 promoter region and the eGFP gene. Primers used for IVT are shown in Table 2 above. The PCR product was transcribed and translated using the TNT ® Quick Coupled Transcription/Translation System (Promega), and the PCR-DNA template (0.5 µg) was translated in 50 µl reaction mixture containing 1 mM methionine at 30 °C for 90 min. . The translated product was lysed using 12% SDS-PAGE and analyzed by Western blot.
11. 웨스턴 블롯11. Western Blot
세포를 1X-RIPA 완충액에서 용해시켰다. 분리된 단백질을 Bio-Rad 반건식 이송 시스템을 사용하여 이소불화비닐(PVDF ; polyvinylidene fluoride) 멤브레인(Western blotting용 Immobilon®-P PVDF membrane, Merck KGaA, Darmstadt, Germany)으로 옮겼다. 비특이적 단백질 결합은 0.05% Tween-20(TBS-T) 완충액을 포함하는 Tris 완충 식염수에서 5% 무지방 우유로 1시간 동안 차단되었다. 그 후, membrane을 TBST 완충액으로 세척하고, 1:5000으로 희석된 1차 항체인 마우스 단일클론 항-EYFP 항체(MAB 8759, Abnova)를 이용하여 4ºC에서 1시간 동안 프로브하였다. 이후, 상온에서 1시간 동안, HRP가 결합되어 있고 1:5000으로 희석된 2차 염소-항 마우스 항체(SC-2031, Santa Cruz Biotechnology, South Korea)를 이용하여 단백질 검출을 수행하였다. 발광 이미지 분석기 LAS3000에 의해 enhanced chemiluminescence(ECL) 웨스턴 블롯 기질을 사용하여 밴드를 검출하였다. EYFP 및 강도는 하우스키핑 유전자 GAPDH 밴드 강도로 정규화 되었다. 밴드 강도는 ImageJ를 사용하여 정량화되었다.Cells were lysed in 1X-RIPA buffer. The isolated protein was transferred to a polyvinylidene fluoride (PVDF) membrane (Immobilon®-P PVDF membrane for Western blotting, Merck KGaA, Darmstadt, Germany) using a Bio-Rad semi-dry transfer system. Non-specific protein binding was blocked with 5% nonfat milk in Tris buffered saline containing 0.05% Tween-20 (TBS-T) buffer for 1 h. Thereafter, the membrane was washed with TBST buffer and probed at 4ºC for 1 hour using a mouse monoclonal anti-EYFP antibody (MAB 8759, Abnova), a primary antibody diluted 1:5000. Thereafter, at room temperature for 1 hour, HRP-bound secondary goat-anti-mouse antibody (SC-2031, Santa Cruz Biotechnology, South Korea) diluted 1:5000 was used for protein detection. Bands were detected using an enhanced chemiluminescence (ECL) western blot substrate by a luminescence image analyzer LAS3000. EYFP and intensity were normalized to the housekeeping gene GAPDH band intensity. Band intensities were quantified using ImageJ.
12. 통계적 분석12. Statistical Analysis
상기 실험 10 내지 11의 데이터는 GraphPad Prism 소프트웨어 버전 8.3.0을 사용하여 분석되었다. One way ANOVA 테스트는 EYFP 번역 억제에 의해 약물이 처리되지 않은 샘플과 처리된 샘플 간의 유의한 차이를 결정하는 데 사용되었다. 데이터는 평균±SEM 또는 평균±SD로 표시되었다. * p≤0.05, ** p≤0.01, *** p≤0.001, **** p≤0.0001. The data of
13. SARS-CoV-2 용량 반응 곡선(DRC; Dose Responsive Curve) 분석-N 단백질 발현 관련13. SARS-CoV-2 Dose Responsive Curve (DRC) Analysis-N Protein Expression Related
13-1. 바이러스 및 세포주13-1. Viruses and cell lines
SARS-CoV-2는 한국질병관리본부(KCDC)에서 제공되었으며, Vero 세포는 ATCC(ATCC-CCL81)로부터 획득하였다.SARS-CoV-2 was provided by the Korea Centers for Disease Control and Prevention (KCDC), and Vero cells were obtained from ATCC (ATCC-CCL81).
13-2. 시약13-2. reagent
기준 화합물로 사용한 chloroquine, lopinavir, remdesivir은 각각 Sigma-Aldrich, SelleckChem, MedChemExpress에서 구입하였다. 항-SARS-CoV-2 뉴클레오캡시드(N) 단백질에 특이적인 1차 항체는 Sino Biological 에서 구입하였으며, 2차 항체인 Alexa Fluor 488 염소 항-토끼 IgG와 Hoechst 33342는 Molecular Probes에서 구입하였다.Chloroquine, lopinavir, and remdesivir used as reference compounds were purchased from Sigma-Aldrich, SelleckChem, and MedChemExpress, respectively. A primary antibody specific for anti-SARS-CoV-2 nucleocapsid (N) protein was purchased from Sino Biological, and secondary antibodies, Alexa Fluor 488 goat anti-rabbit IgG and Hoechst 33342, were purchased from Molecular Probes.
13-3. 면역 형광법에 의한 용량반응곡선(DRC) 분석13-3. Dose-response curve (DRC) analysis by immunofluorescence method
Vero 세포를 2% FBS가 보충된 DMEM에서 1.2x104 세포/웰의 세포 밀도로 384 웰-플레이트에 접종하였다. 24시간 후, DMSO에 2 배 연속 희석하여 10 포인트로 준비된 G4 결합 화합물(NMM, BRACO19, PDS 및 PhenDC3)을 0.08 내지 50 μM 범위의 농도로 세포에 처리하였다. 양성 대조군으로는 항바이러스 활성이 잘 알려진 chloroquine diphosphate(C6628, Sigma-Aldrich, St. Louis, MO), lopinavir(S1380, SelleckChem, Houston, TX) 및 remdesivir(HY-104077, MedChemExpress, Monmouth Junction, NJ)를 사용하였다. 약 1 시간 후, BSL3 시설에서 세포에 SARS-CoV-2 (0.0125 MOI)를 감염시키고 37℃에서 24 시간 동안 배양하였다. 이후 4% 파라포름알데이히드(PFA; paraformaldehyde)로 세포를 고정한 뒤, 투과화하였다. 그 후, 항-SARS-CoV-2 뉴클레오캡시드(N) 1차 항체를 처리하고, Alexa Fluor 488 염소 항-토끼 IgG 2차 항체와 Hoechst 33342를 처리하여 세포를 염색하였다. 감염된 세포의 형광 이미지는 대용량 이미지 분석 기기인 Operetta(Perkin Elmer)를 이용하여 얻었다. Vero cells were seeded in 384 well-plates at a cell density of 1.2x10 4 cells/well in DMEM supplemented with 2% FBS. After 24 hours, cells were treated with G4 binding compounds (NMM, BRACO19, PDS and PhenDC3) prepared at 10 points by 2-fold serial dilution in DMSO at concentrations ranging from 0.08 to 50 μM. As positive controls, chloroquine diphosphate (C6628, Sigma-Aldrich, St. Louis, MO), lopinavir (S1380, SelleckChem, Houston, TX), and remdesivir (HY-104077, MedChemExpress, Monmouth Junction, NJ), which have well-known antiviral activity, were was used. About 1 hour later, cells were infected with SARS-CoV-2 (0.0125 MOI) in the BSL3 facility and incubated at 37° C. for 24 hours. After fixing the cells with 4% paraformaldehyde (PFA; paraformaldehyde), the cells were permeabilized. Thereafter, cells were stained with anti-SARS-CoV-2 nucleocapsid (N) primary antibody, and Alexa Fluor 488 goat anti-rabbit IgG secondary antibody and Hoechst 33342. Fluorescence images of infected cells were obtained using a large-capacity image analysis instrument, Operetta (Perkin Elmer).
13-4. 이미지 분석13-4. image analysis
획득된 이미지는 Columbus 소프트웨어를 이용하여 분석되었다. 웰 당 총 세포수는 Hoechst 로 염색된 핵 수로 산출하였고, 감염된 세포 수는 바이러스 N 단백질을 발현하는 세포수로 산출하였다. 감염도(infection ratio)는 (N 단백질을 발현하는 세포수)/(총 세포수)로 계산하였다. 각 웰당 감염도는 동일한 플레이트에서 감염되지 않은 세포(mock)를 포함한 웰들의 평균 감염도와 0.5% DMSO(v/v)가 처리된 감염세포를 포함한 웰들의 평균 감염도로 정규화하였다. 화합물 농도에 따른 반응 곡선과 IC50, CC50 값은 XLFit 4 (IDBS) 소프트웨어의 하기 식 2를 활용하여 도출하였다.The acquired images were analyzed using Columbus software. The total number of cells per well was calculated as the number of Hoechst stained nuclei, and the number of infected cells was calculated as the number of cells expressing the viral N protein. Infection ratio (infection ratio) was calculated as (number of cells expressing N protein) / (total number of cells). The infectivity per well was normalized to the average infectivity of wells containing uninfected cells (mock) and the average infectivity of wells containing infected cells treated with 0.5% DMSO (v/v) in the same plate. Response curves and IC 50 , CC 50 values according to compound concentrations were derived using
[식 2][Equation 2]
Y = Bottom +(Top-Bottom)/(1 + (IC50/X)Hillslope)Y = Bottom +(Top-Bottom)/(1 + (IC 50 /X) Hillslope )
모든 IC50 와 CC50 값은 두 번의 반복실험으로 획득한 적합 용량반응곡선(fitted dose-response curve)에서 산출하였고, 선택지수 (Selectivity index; SI) 값은 CC50/IC50으로 계산되었다.All IC 50 and CC 50 values were calculated from a fitted dose-response curve obtained through two replicates, and selectivity index (SI) values were calculated as CC 50 /IC 50 .
14. SARS-CoV-2 용량 반응 곡선(DRC; Dose Responsive Curve) 분석-비리온 생산 관련14. SARS-CoV-2 Dose Responsive Curve (DRC) analysis-related to virion production
Vero 세포를 2x105 세포/웰의 세포 밀도로 12 웰-플레이트에 접종하였다. 24시간 후, BSL3 시설에서 1시간 동안, 2배 연속 희석하여 10 포인트로 준비된 G4 결합 화합물(PDS, PhenDC3 및 NMM)을 0.08 내지 50μM 범위의 농도로 세포에 처리하였다. 세포를 PBS로 한 번 세척한 다음 SARS-CoV-2(0.01 MOI)으로 1시간 동안 감염시켰다. 바이러스 접종물을 제거하고 세포를 PBS로 1회 세척한 후, 각각의 농도에서 상기와 동일한 G4 결합 화합물을 함유하는 2% FBS DMEM 배지로 교체하고 24시간 또는 48시간 동안 배양하였다. DMSO 및 증류수 vehicle도 각각의 화합물에 대한 대조군으로 추가하였다. 감염 24시간 또는 48시간 후, 바이러스 상등액을 수집하고 PROMEGA Maxwell® RSC48 기기를 이용한 자동 핵산 정제를 통해 총 RNA를 추출하였다. RT-qPCR은 THERMO QuantStudio™ 3 시스템을 이용하여 샘플 당 이중으로 SARS-CoV-2 RdRp에 특이적인 프라이머를 사용하여 수행되었다. ΔΔCt 방법으로 바이러스 게놈 RNA 전사 수준을 분석하고, G4 결합 화합물 처리군을 DMSO 또는 증류수 대조군으로 정규화하여 상대적인 감염 저해율(inhibition of infection)을 계산하였다. 각 화합물에 대한 IC50은 Graphpad Prism 5.0 소프트웨의 하기 식 3를 활용하여 도출하였다. Vero cells were seeded in 12 well-plates at a cell density of 2x10 5 cells/well. After 24 hours, cells were treated with G4 binding compounds (PDS, PhenDC3 and NMM) prepared at 10-point 2-fold serial dilutions at concentrations ranging from 0.08 to 50 μM for 1 hour in the BSL3 facility. Cells were washed once with PBS and then infected with SARS-CoV-2 (0.01 MOI) for 1 h. After removing the virus inoculum and washing the cells once with PBS, they were replaced with 2% FBS DMEM medium containing the same G4 binding compound as above at each concentration and incubated for 24 or 48 hours. DMSO and distilled water vehicle were also added as controls for each compound. At 24 or 48 hours post infection, viral supernatants were collected and total RNA was extracted via automated nucleic acid purification using a PROMEGA Maxwell ® RSC48 instrument. RT-qPCR was performed using primers specific for SARS-CoV-2 RdRp in duplicate per sample using the
[식 3][Equation 3]
Y = Bottom + (Top-Bottom)/(1 + (IC50/X)Hillslope)Y = Bottom + (Top-Bottom)/(1 + (IC 50 /X) Hillslope )
15. HCoV-OC43 용량 반응 곡선(DRC; Dose Responsive Curve) 분석-비리온 생산 관련15. Analysis of HCoV-OC43 Dose Responsive Curve (DRC) - Related to virion production
인간 대장암 세포주인 HCT-8 세포를 2x105 세포/웰의 세포 밀도로 12 웰-플레이트에 접종하였다. 24 시간 후 1시간 동안, 2배 연속 희석하여 10 포인트로 준비된 G4 결합 화합물(CX3543, NMM, TMPyP4 및 TMPyP2)을 0.08 내지 50μM 범위의 농도로 세포에 처리하였다. 세포를 PBS로 한 번 세척한 다음 HCoV-OC43(0.05 MOI)으로 1시간 동안 감염시켰다. 바이러스 접종물을 제거하고 세포를 PBS로 1회 세척한 후, 각각의 농도에서 상기와 동일한 G4 결합 화합물을 함유하는 2% FBS DMEM 배지로 교체하고 72시간 동안 배양하였다. DMSO 및 증류수 vehicle도 각각의 화합물에 대한 대조군으로 추가하였다. 감염 72시간 후, 바이러스 상등액을 수집하고 감염성 바이러스의 역가를 플라크어세이를 통해 정량하였다.HCT-8 cells, a human colorectal cancer cell line, were seeded in 12 well-plates at a cell density of 2x10 5 cells/well. For 1 hour after 24 hours, cells were treated with G4-binding compounds (CX3543, NMM, TMPyP4 and TMPyP2) prepared at 10-point dilutions by 2-fold serial dilutions at concentrations ranging from 0.08 to 50 μM. Cells were washed once with PBS and then infected with HCoV-OC43 (0.05 MOI) for 1 h. After removing the virus inoculum and washing the cells once with PBS, they were replaced with 2% FBS DMEM medium containing the same G4 binding compound as above at each concentration and incubated for 72 hours. DMSO and distilled water vehicle were also added as controls for each compound. After 72 hours of infection, the viral supernatant was collected and the titer of the infectious virus was quantified through a plaque assay.
플라크어세이는 하루 전에 12 웰-플레이트에 접종한 Vero 세포에, 10배로 연속 희석한 바이러스 상등액을 각각 2개 웰에 이중으로 접종하고, 1시간 배양 후 제거하였다. DMEM 배양액에 0.5% 메틸셀룰로스(methylcellulose)를 포함하는 플라크어세이용 오버레이(overlay) 미디어를 넣어 5-6일간 배양하였다. 배양 5-6일 후, 오버레이 미디어를 제거하고 20% 에탄올에 2% 크리스탈바이올렛(crystal violoet) 염색액을 포함하는 용액으로 세포를 고정·염색하여 플라크 수를 계수, 바이러스의 역가를 측정하였다. 각 시료의 바이러스 역가에서 G4 결합 화합물 처리군을 DMSO 또는 증류수 대조군으로 정규화하여 상대적인 감염 저해율(inhibition of infection)을 계산하였다. 각 화합물에 대한 IC50은 Graphpad Prism 5.0 소프트웨의 상기 식 3를 활용하여 도출하였다. For the plaque assay, two wells of Vero cells inoculated in 12 well-plates the day before, and virus supernatant serially diluted 10-fold were inoculated in 2 wells each, and removed after 1 hour of incubation. Plaque assay overlay media containing 0.5% methylcellulose was put in DMEM culture medium and cultured for 5-6 days. After 5-6 days of culture, the overlay media was removed, and the cells were fixed and stained with a solution containing 2% crystal violet staining solution in 20% ethanol to count the number of plaques and measure the virus titer. The relative inhibition of infection was calculated by normalizing the G4-binding compound treatment group to the DMSO or distilled water control group in the virus titer of each sample. IC 50 for each compound was derived using
HCT-8 세포에서의 세포독성은 96 웰-플레이트에 접종한 세포에 상기 용량 분석 실험과 동일한 농도로 준비한 G4 결합화합물을 이중으로 처리하고 72시간 후, 5mg/ml 의 농도의 MTT(3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide) 10 μl를 각 웰에 3시간 동안 37℃에서 처리하였다. 처리 후, 상등액을 제거하여 세포를 PBS로 한 번 세척한 다음, 100μl DMSO를 넣고 1시간 암흑 속에서 추가 처리한 후 540nm 파장의 흡광도를 측정하여 분석하였다. 각 화합물의 농도별 세포독성은 G4 결합 화합물 처리군을 DMSO 또는 증류수 대조군으로 정규화하여 상대적인 세포독성을 계산하였다.For cytotoxicity in HCT-8 cells, cells inoculated in 96-well-plates were treated with the G4 binding compound prepared at the same concentration as in the above dose analysis experiment, and 72 hours later, MTT (3-(3-( 10 μl of 4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide) was treated at 37° C. for 3 hours in each well. After treatment, the supernatant was removed, the cells were washed once with PBS, and then 100 μl DMSO was added and further treated in the dark for 1 hour, and then the absorbance at a wavelength of 540 nm was measured and analyzed. For the cytotoxicity by concentration of each compound, the relative cytotoxicity was calculated by normalizing the G4-binding compound-treated group to DMSO or distilled water control.
[실시예] [Example]
실시예 1. 생물정보학 분석을 통한 SARS-CoV-2 genome의 G4 확인Example 1. Confirmation of G4 of SARS-CoV-2 genome through bioinformatics analysis
최대 길이 30bp의 기준으로 SARS-CoV-2 게놈에 QGRS 매퍼를 적용하였고, 최소 G그룹 길이는 2이고 루프 크기는 0 내지 36인 25개의 G4를 식별하였다. 그 결과는 도 1에 나타내었다.The QGRS mapper was applied to the SARS-CoV-2 genome with a maximum length of 30 bp, and 25 G4s with a minimum G group length of 2 and a loop size of 0 to 36 were identified. The results are shown in FIG. 1 .
도 1에 나타난 바와 같이, G4는 ORF-1ab, 스파이크(S), ORF3a, 멤브레인(M) 및 뉴클레오캡시드(N) 유전자의 오픈 리딩 프레임 영역에 위치하였다. 또한 G4는 Nsps(ORF1 ab에 의해 인코딩 됨)를 코딩하는 게놈 영역에서 더 높은 밀도로 나타났고, 구조 단백질을 코딩하는 게놈 영역에서 더 낮은 밀도로 나타났다. 또한, SARS-CoV-2의 게놈에서 G그룹 길이가 3 또는 4인 G4는 발견되지 않았다.As shown in FIG. 1 , G4 was located in the open reading frame region of ORF-1ab, spike (S), ORF3a, membrane (M) and nucleocapsid (N) genes. G4 also appeared at a higher density in the genomic region encoding Nsps (encoded by ORF1 ab) and at a lower density in the genomic region encoding structural proteins. In addition, G4 with a G group length of 3 or 4 was not found in the genome of SARS-CoV-2.
실시예 2. SARS-CoV-2에서 예측된 G4의 안정적인 G4 구조 형성Example 2. Stable G4 structure formation of predicted G4 in SARS-CoV-2
G4의 형성 및 구조적 안정성을 확인하기 위해, G4에 해당하는 RNA 올리고뉴클레오타이드를 사용하여 SARS-CoV-2에서 예측된 모든 G4에 대하여 생물물리학적 연구를 수행하였다. 원평광 이색성(CD) 스펙트럼을 측정하여 G4 구조의 형성을 확인하였고, CD 열 용융 분석을 통해 G4의 구조적 안정성을 확인하였다. 그 결과는 도 2a 및 2b, 도 3a 및 3b에 나타내었다.To confirm the formation and structural stability of G4, a biophysical study was performed for all G4 predicted in SARS-CoV-2 using the RNA oligonucleotide corresponding to G4. Circular dichroism (CD) spectra were measured to confirm the formation of the G4 structure, and the structural stability of G4 was confirmed through CD thermal melting analysis. The results are shown in Figs. 2a and 2b, and Figs. 3a and 3b.
도 2a 및 2b에 나타난 바와 같이, 모든 SARS-CoV-2 G4의 CD 스펙트럼은 약 265nm에서 강한 양의 피크와 약 240nm에서 음의 피크를 특징으로 하는 G4 topology를 확인하였다.As shown in FIGS. 2A and 2B , the CD spectra of all SARS-CoV-2 G4s confirmed the G4 topology characterized by a strong positive peak at about 265 nm and a negative peak at about 240 nm.
또한, 도 3a 및 3b에 나타난 바와 같이, SARS-CoV-2 G4는 50~75℃ 범위의 Tm을 나타내었다. 이는 SARS-CoV-2에서 예측된 G4 서열이 시험관 내에서 안정한 G4 구조로 접힐 수 있음을 의미한다.In addition, as shown in Figures 3a and 3b, SARS-CoV-2 G4 exhibited a Tm in the range of 50 ~ 75 ℃. This means that the predicted G4 sequence in SARS-CoV-2 can fold into a stable G4 structure in vitro.
실시예 3. Nsp1, Nsp3에 대한 위치지정 돌연변이 도입에 따른 G4의 불안정성Example 3. Instability of G4 following introduction of site-directed mutations for Nsp1 and Nsp3
Nsp1, Nsp3에 위치한 G4(G4-353, G4-644, G4-3467)는 하기 표 4와 같이 PDS, PhenDC3로 처리했을 때, 가장 높은 ΔTm을 보였고 중요한 생물학적 기능을 가지고 있기 때문에 돌연변이 대상으로 선택하였다. Nsp1 및 Nsp3에서 SARS-CoV-2 G4 타겟팅의 영향을 시각화하기 위해, WT-G4 시퀀스에서 빨간색으로 강조된 구아닌(G)는 아데닌(A)으로 돌연변이 시켜서 G4 형성을 방해하는 Mut-G4을 만들었다. 이는 하기 표 3에 나타내었다. 그 후, WT 및 Mut G-353, G-644, G-3467의 CD 스펙트럼을 확인하였다. 그 결과는 도 4에 나타내었다.G4 (G4-353, G4-644, G4-3467) located in Nsp1 and Nsp3 showed the highest ΔTm when treated with PDS and PhenDC3 as shown in Table 4 below and was selected as a mutation target because it has important biological functions. . To visualize the effect of SARS-CoV-2 G4 targeting on Nsp1 and Nsp3, guanine (G) highlighted in red in the WT-G4 sequence was mutated to adenine (A) to create Mut-G4, which disrupts G4 formation. This is shown in Table 3 below. Thereafter, CD spectra of WT and Mut G-353, G-644, and G-3467 were confirmed. The results are shown in FIG. 4 .
도 4에 나타낸 바와 같이, WT-G4의 CD 스펙트럼과 비교하여 Mut-G4는 최대값이 약 260nm에서 약 270nm로 이동하여 G4 topology가 파괴되었음을 나타냈다. 또한, CD 열 용융 분석에서 Mut-G4는 WT-G4보다 낮은 Tm 값을 보였다. 이는 Mut-G4에서 G4의 불안정성을 의미한다. As shown in Fig. 4, compared with the CD spectrum of WT-G4, Mut-G4 showed that the maximum value shifted from about 260 nm to about 270 nm and the G4 topology was disrupted. In addition, in CD thermal melting analysis, Mut-G4 showed a lower Tm value than WT-G4. This indicates the instability of G4 in Mut-G4.
실시예 4. G4 결합 화합물 처리에 따른 SARS-CoV-2 G4 안정성Example 4. SARS-CoV-2 G4 stability following treatment with G4 binding compound
RNA 올리고뉴클레오타이드 15μM를 10mM Tris-HCl(pH 7.5) 및 100mM KCl에서 어닐링 하였다. 그 후, 화합물 30μM를 처리하여 인큐베이션 하였다. 다음으로 원평광 이색성 분석기를 통해서 나오는 spectra의 특징을 통해 SARS-CoV2에 존재하는 25개의 G4를 확인하였다. 각 스펙트럼은 3회 측정의 평균치이다. 그 결과는 도 5a 및 5b에 나타내었다.15 μM of RNA oligonucleotides were annealed in 10 mM Tris-HCl (pH 7.5) and 100 mM KCl. After that, 30 μM of the compound was treated and incubated. Next, 25 G4s present in SARS-CoV2 were identified through the spectra characteristics emitted through the circular dichroism analyzer. Each spectrum is the average of three measurements. The results are shown in Figures 5a and 5b.
도 5a 및 5b에 나타난 바와 같이, G4 결합 화합물을 처리한 경우, CD 스펙트럼은 약 265 nm에서 양의 피크 및 약 240 nm에서 음의 피크를 가져, 실시예 2의 스펙트럼에서 상당한 변화를 나타내지 않았다. 이는 G4 결합 화합물이 G4 topology를 변경시키지 않는다는 것을 의미한다.As shown in FIGS. 5A and 5B , when the G4 binding compound was treated, the CD spectrum had a positive peak at about 265 nm and a negative peak at about 240 nm, indicating no significant change in the spectrum of Example 2. This means that the G4 binding compound does not alter the G4 topology.
또한, RNA G4 15μM에 화합물 30μM를 처리하여 인큐베이션 하고, G4 결합 화합물의 유무를 달리하여, RNA G4(15μM)의 CD 열 용융 곡선을 얻었다. 또한, 용융 온도의 차이(ΔTm)를 측정하여 SARS-CoV-2 G4의 안정성에 대한 G4 결합 화합물의 영향을 확인했다. 그 결과는 도 6a 및 6b에 나타내었다.In addition, 15 µM of RNA G4 was treated with 30 µM of compound and incubated, and the presence or absence of a G4-binding compound was varied to obtain a CD thermal melting curve of RNA G4 (15 µM). In addition, the effect of the G4-binding compound on the stability of SARS-CoV-2 G4 was confirmed by measuring the difference in melting temperature (ΔTm). The results are shown in Figures 6a and 6b.
도 6a 및 6b에 나타낸 바와 같이, CX-3543의 ΔTm은 눈에 띄는 변화를 나타내지 않은 반면, PhenDC3 및 PDS의 ΔTm은 CX-3543에 비해 크게 나타났다. 이는 CX-3543에 비해, PhenDC3 및 PDS가 대부분의 G4를 상당히 안정화시켰다는 것을 의미한다. 자세한 수치는 하기 표 4에 나타내었다. 또한, 각 화합물 사이 ΔTm의 비교를 하기 표 5에 나타내었다.As shown in FIGS. 6A and 6B , ΔTm of CX-3543 did not show a noticeable change, whereas ΔTm of PhenDC3 and PDS was larger than that of CX-3543. This means that compared to CX-3543, PhenDC3 and PDS significantly stabilized most of G4. Detailed numerical values are shown in Table 4 below. In addition, the comparison of ΔTm between each compound is shown in Table 5 below.
표 5에 나타난 바와 같이, SARS-CoV-2에서 예측된 25개의 G4 중 PDS는 G4의 36%에서 ΔTm>20℃인 반면, PhenDC3은 G4의 72%에서 ΔTm>20℃ 이었다. 이는 화합물에 의해 안정화되는 G4의 비율은 PhenDC3가 PDS보다 높다는 것을 의미한다. As shown in Table 5, among the 25 G4 predicted in SARS-CoV-2, PDS had ΔTm>20°C in 36% of G4, whereas PhenDC3 had ΔTm>20°C in 72% of G4. This means that the proportion of G4 stabilized by the compound is higher in PhenDC3 than in PDS.
실시예 5. 세포 독성 확인Example 5. Confirmation of cytotoxicity
HEK293T 세포와 Vero 세포에서 PDS 및 PhenDC3의 독성을 확인하였다. 그 결과는 도 7a 내지 도 7d에 나타내었다.The toxicity of PDS and PhenDC3 was confirmed in HEK293T cells and Vero cells. The results are shown in FIGS. 7A to 7D .
도 7a 및 7c에 나타난 바와 같이, HEK293T 세포에서 PDS는 75μM까지 사용하기에 안전했지만, PhenDC3은 75μM에서 48시간 후 생존율이 25% 감소하였다. 또한, 도 7b 및 7d에 나타난 바와 같이, Vero 세포에서 48시간 후 75μM까지 PDS 및 PhenDC3에 대해 세포 독성이 관찰되지 않았다.7A and 7C , PDS in HEK293T cells was safe to use up to 75 μM, but PhenDC3 showed a 25% decrease in viability after 48 hours at 75 μM. In addition, as shown in FIGS. 7B and 7D , no cytotoxicity was observed for PDS and PhenDC3 up to 75 μM after 48 hours in Vero cells.
실시예 6. T7 프로모터를 포함하는 WT-G4, Mut-G4의 PCR 증폭Example 6. PCR amplification of WT-G4 and Mut-G4 containing T7 promoter
IVT(In-Vitro transcriotion/trnaslation)분석에 대하여, N1-WT-G4-353, 644, 3467 및 N1-Mut-G4-353, 644, 3467를 T7 프로모터 부위로 PCR 증폭하고 T7-WT-G4-353, 644, 3467 및 T7-Mut-G4-353, 644, 3467로 명명하였다. 그 결과는 도 8에 나타내었다.For In-Vitro transcriotion/trnaslation (IVT) analysis, PCR amplification of N1-WT-G4-353, 644, 3467 and N1-Mut-G4-353, 644, 3467 with T7 promoter region and T7-WT-G4- 353, 644, 3467 and T7-Mut-G4-353, 644, 3467. The results are shown in FIG. 8 .
도 8에 나타난 바와 같이, 65℃에서 겔에서 용출되는 증폭된 생성물의 명확한 단일 밴드가 관찰되었다.As shown in FIG. 8 , a clear single band of the amplified product eluting from the gel at 65° C. was observed.
실시예 7. IVT(In-Vitro transcriotion/trnaslation)분석Example 7. In-Vitro transcriotion/trnaslation (IVT) analysis
IVT 분석으로 다양한 농도의 G4 결합 화합물의 번역에 대한 영향을 확인하였다. 번역이 억제 되는 경우, 해당 화합물이 G4 구조의 안정화에 효과 있다는 것을 의미한다. 이를 시각화하기 위하여 EYFP(enhanced yellow fluorescent protein) 리포터 시스템을 구축하였으며, 화합물 처리 48시간 후, 세포를 채취하여 EYFP 발현을 웨스턴 블롯으로 분석하였다. 그 결과는 도 9a 내지 9c, 도 10a 내지 10c, 도 11a 내지 11d, 도 12a 내지 12d에 나타내었다.IVT analysis confirmed the effects of various concentrations of G4 binding compounds on translation. If translation is inhibited, it means that the compound is effective in stabilizing the G4 structure. To visualize this, an enhanced yellow fluorescent protein (EYFP) reporter system was constructed, and 48 hours after compound treatment, cells were harvested and EYFP expression was analyzed by Western blot. The results are shown in FIGS. 9A to 9C, 10A to 10C, 11A to 11D, and 12A to 12D.
도 9a 및 10a, 도 11a 및 도 12a에 나타난 바와 같이, N1-WT-G4-353에서 PDS 및 PhenDC3이 각각 50μM에서 처리되었을 때 EYFP 발현은 65% 및 90% 감소하였다. 50 μM 미만의 농도는 EYFP 리포터 발현을 억제하는 데 효과적이지 않았다.As shown in FIGS. 9A and 10A, 11A and 12A , when PDS and PhenDC3 were treated at 50 μM in N1-WT-G4-353, respectively, EYFP expression was reduced by 65% and 90%. Concentrations below 50 μM were not effective in inhibiting EYFP reporter expression.
도 9b 및 10b, 도 11b 및 도 12b에 나타난 바와 같이, N1-WT-G4-644에서 PDS가 25 및 50 μM 처리되었을 때, EYFP 발현은 80-90% 감소하였지만, PhenDC3이 5 μM 처리되었을 때에도 EYFP 발현은 50% 감소하였다. As shown in FIGS. 9b and 10b, 11b and 12b, when PDS was treated with 25 and 50 μM in N1-WT-G4-644, EYFP expression was reduced by 80-90%, but even when PhenDC3 was treated with 5 μM EYFP expression was reduced by 50%.
도 9c 및 10c, 도 11c 및 도 12c에 나타난 바와 같이, N1-WT-G4-3467에서 PDS가 15 내지 50 μM 처리되었을 때, EYFP 발현을 60% 억제했으며 약물 농도 증가에 따른 어떠한 변화도 보이지 않았다. PhenDC3가 50μM 처리되었을 때, EYFP 발현의 70% 감소와 함께, 농도 의존적 감소를 나타내었다. As shown in FIGS. 9c and 10c, 11c and 12c, when PDS was treated with 15 to 50 μM in N1-WT-G4-3467, EYFP expression was inhibited by 60% and no change was seen with increasing drug concentration. . When PhenDC3 was treated with 50 μM, it showed a concentration-dependent decrease, along with a 70% decrease in EYFP expression.
도 11d 및 도 12d에 나타난 바와 같이, N1-Mut-G4-3467에 PDS 및 PhenDC3가 처리되면 농도 의존 방식으로 EYFP 발현을 억제하지 않았다.11d and 12d, when N1-Mut-G4-3467 was treated with PDS and PhenDC3, EYFP expression was not inhibited in a concentration-dependent manner.
상기 결과는 PDS와 PhenDC3가 코로나바이러스 G4 구조를 안정화함으로써 Nsp1 및 Nsp3 mRNA의 번역을 억제한다는 것을 의미한다. 또한, PhenDC3이 PDS보다 SARS-CoV-2 G4를 안정화하는 데 더 높은 효과가 있다는 것을 의미한다.These results suggest that PDS and PhenDC3 inhibit the translation of Nsp1 and Nsp3 mRNA by stabilizing the structure of coronavirus G4. It also means that PhenDC3 has a higher effect in stabilizing SARS-CoV-2 G4 than PDS.
실시예 8. SARS-CoV-2에 대한 G4 결합 화합물의 항바이러스 효능 확인 - N 단백질 발현관련Example 8. Confirmation of antiviral efficacy of G4 binding compound against SARS-CoV-2 - related to N protein expression
N 단백질은 구조 단백질의 하나로 코로나 바이러스의 바이러스성 포장, 바이러스성 핵 생성, 바이러스 RNA 합성에 중요한 역할을 한다. 화합물의 항바이러스 활성을 확인하고자 감염세포 내에서 N 단백질의 발현의 정도를 분석하였다.The N protein is one of the structural proteins and plays an important role in the viral packaging of coronaviruses, viral nucleation, and viral RNA synthesis. To confirm the antiviral activity of the compound, the level of expression of N protein in infected cells was analyzed.
도 13에 나타난 바와 같이, G4 결합 화합물 중 에서 PDS와 PhenDC3은 각각 9.45μM 및 23.21μM의 IC50으로 SARS-CoV-2 감염을 억제하는 데 가장 효과적이었다. 또한, NMM과 BRACO19는 높은 농도에서 SARS-CoV-2 감염을 억제하였다. 특히 PDS의 IC50은 cholorquine(9.63μM), remdesivir(8.78μM), lopinavir(12.13μM)와 같은 양성대조군과 유사한 바, PDS가 SARS-CoV-2에 대해 강력한 항바이러스 활성을 나타냄을 의미한다.As shown in FIG. 13 , among the G4-binding compounds, PDS and PhenDC3 were most effective in inhibiting SARS-CoV-2 infection with IC 50 of 9.45 μM and 23.21 μM, respectively. In addition, NMM and BRACO19 inhibited SARS-CoV-2 infection at high concentrations. In particular, the IC 50 of PDS is similar to positive controls such as cholorquine (9.63 μM), remdesivir (8.78 μM), and lopinavir (12.13 μM), indicating that PDS exhibits strong antiviral activity against SARS-CoV-2.
실시예 9. SARS-CoV-2에 대한 G4 결합 화합물의 항바이러스 효능 확인 - 비리온 생산 관련Example 9. Confirmation of antiviral efficacy of G4 binding compound against SARS-CoV-2 - related to virion production
비리온은 캡시드와 핵산으로 이루어진 온전한 형태의 바이러스 입자로서, 비리온의 생산은 바이러스 복제 원활성과 연관이 있다. 화합물의 항바이러스 효능을 확인하고자 비리온 생산을 상등액에 존재하는 SARS-CoV-2 바이러스의 RNA 게놈을 정량하여 분석하였다.A virion is an intact viral particle composed of a capsid and a nucleic acid, and the production of virions is related to the smoothness of viral replication. To confirm the antiviral efficacy of the compound, virion production was analyzed by quantifying the RNA genome of SARS-CoV-2 virus present in the supernatant.
도 14에 나타난 바와 같이, PDS는 감염 후 24시간 및 48시간에 각각 1.45μM 및 2.77μM의 IC50 값으로 비리온 생산에 대한 강력한 항바이러스 활성을 나타내었다. PhenDC3는 또한 SARS-CoV-2 비리온 생성을 억제했으며 IC50 값은 감염 후 24시간 및 48시간에 각각 24.47μM 및 23.17μM인 것으로 추정되었다. 이는 실시예 8의 결과와 같이, PDS와 PhenDC3가 Vero 세포에서 SARS-CoV-2 복제를 억제하는 데 강력함을 시사한다.As shown in FIG. 14 , PDS exhibited strong antiviral activity against virion production with IC 50 values of 1.45 μM and 2.77 μM, respectively, at 24 and 48 hours after infection. PhenDC3 also inhibited SARS-CoV-2 virion production and IC 50 values were estimated to be 24.47 μM and 23.17 μM at 24 and 48 hours post infection, respectively. This suggests that, as in Example 8, PDS and PhenDC3 are potent in inhibiting SARS-CoV-2 replication in Vero cells.
도 15에 나타난 바와 같이, NMM의 IC50은 PhenDC3의 IC50과 유사한 바, NMM은 Vero 세포에서 SARS-CoV-2의 비리온 생성을 억제하는 데 효과적이었다.As shown in FIG. 15 , the IC 50 of NMM was similar to that of PhenDC3, and NMM was effective in inhibiting the virion production of SARS-CoV-2 in Vero cells.
종합하면 G4 결합 화합물 PDS, PhenDC3 및 NMM 이 SARS-CoV-2 전사체에서 G4 구조를 안정화함으로써 SARS-CoV-2 복제를 억제하는 효과가 우수하다는 것을 의미한다.Taken together, this means that the G4-binding compounds PDS, PhenDC3 and NMM have excellent inhibitory effects on SARS-CoV-2 replication by stabilizing the G4 structure in the SARS-CoV-2 transcript.
실시예 10. HCoV-OC43 바이러스에 대한 G4 결합 화합물의 항바이러스 효능 확인 - 비리온 생산 관련Example 10. Confirmation of antiviral efficacy of G4 binding compound against HCoV-OC43 virus-related to virion production
비리온은 캡시드와 핵산으로 이루어진 온전한 형태의 바이러스 입자로서, 비리온의 생산은 바이러스 복제 원활성과 연관이 있다. 이에 G4 결합 화합물의 항바이러스 효능을 확인하고자 비리온 생산을 상등액에 존재하는 감염성 바이러스를 플라크어세이로 정량하여 분석하였다.A virion is an intact viral particle composed of a capsid and a nucleic acid, and the production of virions is related to the smoothness of viral replication. In order to confirm the antiviral efficacy of the G4 binding compound, virion production was analyzed by quantifying the infectious virus present in the supernatant using a plaque assay.
도 16에 나타난 바와 같이, NMM은 감염 후 2.10μM의 IC50 값으로 비리온 생산에 대한 강력한 항바이러스 활성을 나타내었다. G4 결합 화합물 TMPyP2, TMPyP4 및 CX3543 또한 HCoV-OC43 바이러스의 비리온 생성을 억제했으며 IC50 값은 감염 후 각각 11.7μM, 2.80μM, 1.40μM인 것으로 추정되었다. 이는 CX3543, NMM, TMPyP4 및 TMPyP2가 Vero 세포에서 HCoV-OC43 바이러스 복제를 억제하는 데 강력함을 시사한다.As shown in FIG. 16 , NMM exhibited strong antiviral activity against virion production with an IC 50 value of 2.10 μM after infection. The G4-binding compounds TMPyP2, TMPyP4 and CX3543 also inhibited virion production of HCoV-OC43 virus, and IC 50 values were estimated to be 11.7 μM, 2.80 μM, and 1.40 μM, respectively, after infection. This suggests that CX3543, NMM, TMPyP4 and TMPyP2 are potent in inhibiting HCoV-OC43 virus replication in Vero cells.
이는 G4 결합 화합물 NMM, TMPyP2, TMPyP4 및 CX3543이 HCoV-OC43 바이러스의 G4 구조를 안정화함으로써 HCoV-OC43 바이러스 복제를 억제하는 효과가 우수하다는 것을 의미한다.This means that the G4-binding compounds NMM, TMPyP2, TMPyP4 and CX3543 have an excellent effect of inhibiting HCoV-OC43 virus replication by stabilizing the G4 structure of the HCoV-OC43 virus.
따라서, 본 발명의 G4 구조에 결합하는 화합물을 이용하여 SARS-CoV-2 및 HCoV-OC43 바이러스를 포함하는 코로나 바이러스의 감염증을 치료할 수 있을 것으로 기대된다.Therefore, it is expected that the compound binding to the G4 structure of the present invention can be used to treat coronavirus infections including SARS-CoV-2 and HCoV-OC43 viruses.
전술한 본 발명의 설명은 예시를 위한 것이며, 본 발명이 속하는 기술분야의 통상의 지식을 가진 자는 본 발명의 기술적 사상이나 필수적인 특징을 변경하지 않고서 다른 구체적인 형태로 쉽게 변형이 가능하다는 것을 이해할 수 있을 것이다. 그러므로 이상에서 기술한 실시예들은 모든 면에서 예시적인 것이며 한정적이 아닌 것으로 이해해야 한다. The description of the present invention described above is for illustration, and those of ordinary skill in the art to which the present invention pertains can understand that it can be easily modified into other specific forms without changing the technical spirit or essential features of the present invention. will be. Therefore, it should be understood that the embodiments described above are illustrative in all respects and not restrictive.
<110> Research and Business Foundation SUNGKYUNKWAN UNIVERSITY <120> Phamaceutical composition for preventing or treating Coronavirus infectious disease comprising Coronavirus G-quadruplex ligands as an active ingredient <130> MP20-182P1 <150> KR 10-2020-0120799 <151> 2020-09-18 <160> 44 <170> KoPatentIn 3.0 <210> 1 <211> 25 <212> RNA <213> Artificial Sequence <220> <223> G-353 <400> 1 ggcuuuggag acuccgugga ggagg 25 <210> 2 <211> 20 <212> RNA <213> Artificial Sequence <220> <223> G-644 <400> 2 gguaauaaag gagcuggugg 20 <210> 3 <211> 26 <212> RNA <213> Artificial Sequence <220> <223> G-1463 <400> 3 gguggucgca cuauugccuu uggagg 26 <210> 4 <211> 26 <212> RNA <213> Artificial Sequence <220> <223> G-1574 <400> 4 gguguuguug gagaagguuc cgaagg 26 <210> 5 <211> 29 <212> RNA <213> Artificial Sequence <220> <223> G-2714 <400> 5 ggcggugcac caacaaaggu uacuuuugg 29 <210> 6 <211> 17 <212> RNA <213> Artificial Sequence <220> <223> G-3467 <400> 6 ggaggaggug uugcagg 17 <210> 7 <211> 27 <212> RNA <213> Artificial Sequence <220> <223> G-4162 <400> 7 gguuauaccu acuaaaaagg cuggugg 27 <210> 8 <211> 29 <212> RNA <213> Artificial Sequence <220> <223> G-4261 <400> 8 ggguuuaaau gguuacacug uagaggagg 29 <210> 9 <211> 23 <212> RNA <213> Artificial Sequence <220> <223> G-8687 <400> 9 ggauacaagg cuauugaugg ugg 23 <210> 10 <211> 30 <212> RNA <213> Artificial Sequence <220> <223> G-10267 <400> 10 ggcugguaau guucaacuca ggguuauugg 30 <210> 11 <211> 20 <212> RNA <213> Artificial Sequence <220> <223> G-13385 <400> 11 gguaugugga aagguuaugg 20 <210> 12 <211> 28 <212> RNA <213> Artificial Sequence <220> <223> G-14947 <400> 12 gguuuuccau uuaauaaaug ggguaagg 28 <210> 13 <211> 27 <212> RNA <213> Artificial Sequence <220> <223> G-15208 <400> 13 ggaacaagca aauucuaugg ugguugg 27 <210> 14 <211> 29 <212> RNA <213> Artificial Sequence <220> <223> G-15448 <400> 14 ggcgguucac uauauguuaa accaggugg 29 <210> 15 <211> 23 <212> RNA <213> Artificial Sequence <220> <223> G-18296 <400> 15 ggauuggcuu cgaugucgag ggg 23 <210> 16 <211> 29 <212> RNA <213> Artificial Sequence <220> <223> G-22316 <400> 16 ggugauucuu cuucagguug gacagcugg 29 <210> 17 <211> 20 <212> RNA <213> Artificial Sequence <220> <223> G-24215 <400> 17 gguuggaccu uuggugcagg 20 <210> 18 <211> 24 <212> RNA <213> Artificial Sequence <220> <223> G-24268 <400> 18 ggcuuauagg uuuaauggua uugg 24 <210> 19 <211> 22 <212> RNA <213> Artificial Sequence <220> <223> G-25197 <400> 19 ggccauggua cauuuggcua gg 22 <210> 20 <211> 29 <212> RNA <213> Artificial Sequence <220> <223> G-25951 <400> 20 ggugguuaua cugaaaaaug ggaaucugg 29 <210> 21 <211> 30 <212> RNA <213> Artificial Sequence <220> <223> G-26746 <400> 21 ggaucaccgg uggaauugcu aucgcaaugg 30 <210> 22 <211> 29 <212> RNA <213> Artificial Sequence <220> <223> G-28781 <400> 22 ggcuucuacg cagaagggag cagaggcgg 29 <210> 23 <211> 15 <212> RNA <213> Artificial Sequence <220> <223> G-28903 <400> 23 ggcuggcaau ggcgg 15 <210> 24 <211> 19 <212> RNA <213> Artificial Sequence <220> <223> G-29123 <400> 24 ggaaauuuug gggaccagg 19 <210> 25 <211> 30 <212> RNA <213> Artificial Sequence <220> <223> G-29234 <400> 25 ggcugguaau guucaacuca ggguuauugg 30 <210> 26 <211> 27 <212> DNA <213> Artificial Sequence <220> <223> WT G4-353 (Fwd) <400> 26 tatagctcga gatggagagc cttgtcc 27 <210> 27 <211> 28 <212> DNA <213> Artificial Sequence <220> <223> WT G4-353 (Rev) <400> 27 tatacggatc cacatgacca tgaggtgc 28 <210> 28 <211> 28 <212> DNA <213> Artificial Sequence <220> <223> WT G4-644 (Fwd) <400> 28 tatacctcga gatggttgag ctggtagc 28 <210> 29 <211> 26 <212> DNA <213> Artificial Sequence <220> <223> WT G4-644 (Rev) <400> 29 tatacggatc cccgttaagc tcacgc 26 <210> 30 <211> 37 <212> DNA <213> Artificial Sequence <220> <223> WT G4-3467 (Fwd) <400> 30 gataactcga gatggaactt acaccagttg ttcagac 37 <210> 31 <211> 35 <212> DNA <213> Artificial Sequence <220> <223> WT G4-3467 (Rev) <400> 31 aatataggat ccggaatctc agcgatcttt tgttc 35 <210> 32 <211> 45 <212> DNA <213> Artificial Sequence <220> <223> Mut G4-353 (Fwd) <400> 32 cgcgacgtgc tcgtacgtga ctttgaagac tccgtagaag aagtc 45 <210> 33 <211> 45 <212> DNA <213> Artificial Sequence <220> <223> Mut G4-353 (Rev) <400> 33 gacttcttct acggagtctt caaagtcacg tacgagcacg tcgcg 45 <210> 34 <211> 38 <212> DNA <213> Artificial Sequence <220> <223> Mut G4-644 (Fwd) <400> 34 cggtaataaa agagctagta gccatagtta cggcgccg 38 <210> 35 <211> 38 <212> DNA <213> Artificial Sequence <220> <223> Mut G4-644 (Rev) <400> 35 cggcgccgta actatggcta ctagctcttt tattaccg 38 <210> 36 <211> 38 <212> DNA <213> Artificial Sequence <220> <223> Mut G4-3467 (Fwd) <400> 36 catggaagaa gtgttgcaag agccttaaat aaggctac 38 <210> 37 <211> 38 <212> DNA <213> Artificial Sequence <220> <223> Mut G4-3467 (Rev) <400> 37 gtagccttat ttaaggctct tgcaacactt cttccatg 38 <210> 38 <211> 38 <212> DNA <213> Artificial Sequence <220> <223> T7-G4-353 (Fwd) <400> 38 agtaatacga ctcactatag ggatggagag ccttgtcc 38 <210> 39 <211> 41 <212> DNA <213> Artificial Sequence <220> <223> T7-G4-644 (Fwd) <400> 39 agtaatacga ctcactatag ggatggttga gctggtagca g 41 <210> 40 <211> 44 <212> DNA <213> Artificial Sequence <220> <223> T7-G4-3467 (Fwd) <400> 40 agtaatacga ctcactatag ggatggaact tacaccagtt gttc 44 <210> 41 <211> 22 <212> DNA <213> Artificial Sequence <220> <223> T7-EYFP (Rev) <400> 41 ttacttgtac agctcgtcca tg 22 <210> 42 <211> 25 <212> RNA <213> Artificial Sequence <220> <223> Mut-G-353 <400> 42 gacuuugaag acuccguaga agaag 25 <210> 43 <211> 20 <212> RNA <213> Artificial Sequence <220> <223> Mut-G-644 <400> 43 gguaauaaaa gagcuaguag 20 <210> 44 <211> 17 <212> RNA <213> Artificial Sequence <220> <223> Mut-G-3467 <400> 44 ggaagaagug uugcaag 17 <110> Research and Business Foundation SUNGKYUNKWAN UNIVERSITY <120> Pharmaceutical composition for preventing or treating Coronavirus infectious disease comprising Coronavirus G-quadruplex ligands as an active ingredient <130> MP20-182P1 <150> KR 10-2020-0120799 <151> 2020-09-18 <160> 44 <170> KoPatentIn 3.0 <210> 1 <211> 25 <212> RNA <213> Artificial Sequence <220> <223> G-353 <400> 1 ggcuuuggag acuccgugga ggagg 25 <210> 2 <211> 20 <212> RNA <213> Artificial Sequence <220> <223> G-644 <400> 2 gguaauaaag gagcuggugg 20 <210> 3 <211> 26 <212> RNA <213> Artificial Sequence <220> <223> G-1463 <400> 3 gguggucgca cuauugccuu uggagg 26 <210> 4 <211> 26 <212> RNA <213> Artificial Sequence <220> <223> G-1574 <400> 4 gguguuguug gagaagguuc cgaagg 26 <210> 5 <211> 29 <212> RNA <213> Artificial Sequence <220> <223> G-2714 <400> 5 ggcggugcac caacaaaggu uacuuuugg 29 <210> 6 <211> 17 <212> RNA <213> Artificial Sequence <220> <223> G-3467 <400> 6 ggaggaggug uugcagg 17 <210> 7 <211> 27 <212> RNA <213> Artificial Sequence <220> <223> G-4162 <400> 7 gguuauaccu acuaaaaagg cuggugg 27 <210> 8 <211> 29 <212> RNA <213> Artificial Sequence <220> <223> G-4261 <400> 8 ggguuuaaau gguuacacug uagaggagg 29 <210> 9 <211> 23 <212> RNA <213> Artificial Sequence <220> <223> G-8687 <400> 9 ggauacaagg cuauugaugg ugg 23 <210> 10 <211> 30 <212> RNA <213> Artificial Sequence <220> <223> G-10267 <400> 10 ggcugguaau guucaacuca ggguuauugg 30 <210> 11 <211> 20 <212> RNA <213> Artificial Sequence <220> <223> G-13385 <400> 11 gguaugugga aagguuaugg 20 <210> 12 <211> 28 <212> RNA <213> Artificial Sequence <220> <223> G-14947 <400> 12 gguuuuccau uuaauaaaug ggguaagg 28 <210> 13 <211> 27 <212> RNA <213> Artificial Sequence <220> <223> G-15208 <400> 13 ggaacaagca aauucuaugg ugguugg 27 <210> 14 <211> 29 <212> RNA <213> Artificial Sequence <220> <223> G-15448 <400> 14 ggcgguucac uauauguuaa accaggugg 29 <210> 15 <211> 23 <212> RNA <213> Artificial Sequence <220> <223> G-18296 <400> 15 ggauuggcuu cgaugucgag ggg 23 <210> 16 <211> 29 <212> RNA <213> Artificial Sequence <220> <223> G-22316 <400> 16 ggugauucuu cuucagguug gacagcugg 29 <210> 17 <211> 20 <212> RNA <213> Artificial Sequence <220> <223> G-24215 <400> 17 gguuggaccu uuggugcagg 20 <210> 18 <211> 24 <212> RNA <213> Artificial Sequence <220> <223> G-24268 <400> 18 ggcuuauagg uuuaaugga uugg 24 <210> 19 <211> 22 <212> RNA <213> Artificial Sequence <220> <223> G-25197 <400> 19 ggccauggua cauuuggcua gg 22 <210> 20 <211> 29 <212> RNA <213> Artificial Sequence <220> <223> G-25951 <400> 20 gggguuaua cugaaaaaug ggaaucugg 29 <210> 21 <211> 30 <212> RNA <213> Artificial Sequence <220> <223> G-26746 <400> 21 ggaucaccgg uggaauugcu aucgcaaugg 30 <210> 22 <211> 29 <212> RNA <213> Artificial Sequence <220> <223> G-28781 <400> 22 ggcuucuacg cagaagggag cagaggcgg 29 <210> 23 <211> 15 <212> RNA <213> Artificial Sequence <220> <223> G-28903 <400> 23 ggcuggcaau ggcgg 15 <210> 24 <211> 19 <212> RNA <213> Artificial Sequence <220> <223> G-29123 <400> 24 ggaaauuuug gggaccagg 19 <210> 25 <211> 30 <212> RNA <213> Artificial Sequence <220> <223> G-29234 <400> 25 ggcugguaau guucaacuca ggguuauugg 30 <210> 26 <211> 27 <212> DNA <213> Artificial Sequence <220> <223> WT G4-353 (Fwd) <400> 26 tatagctcga gatggagagc cttgtcc 27 <210> 27 <211> 28 <212> DNA <213> Artificial Sequence <220> <223> WT G4-353 (Rev) <400> 27 tatacggatc cacatgacca tgaggtgc 28 <210> 28 <211> 28 <212> DNA <213> Artificial Sequence <220> <223> WT G4-644 (Fwd) <400> 28 tatacctcga gatggttgag ctggtagc 28 <210> 29 <211> 26 <212> DNA <213> Artificial Sequence <220> <223> WT G4-644 (Rev) <400> 29 tatacggatc cccgttaagc tcacgc 26 <210> 30 <211> 37 <212> DNA <213> Artificial Sequence <220> <223> WT G4-3467 (Fwd) <400> 30 gataactcga gatggaactt acaccagttg ttcagac 37 <210> 31 <211> 35 <212> DNA <213> Artificial Sequence <220> <223> WT G4-3467 (Rev) <400> 31 aatataggat ccggaatctc agcgatcttt tgttc 35 <210> 32 <211> 45 <212> DNA <213> Artificial Sequence <220> <223> Mut G4-353 (Fwd) <400> 32 cgcgacgtgc tcgtacgtga ctttgaagac tccgtagaag aagtc 45 <210> 33 <211> 45 <212> DNA <213> Artificial Sequence <220> <223> Mut G4-353 (Rev) <400> 33 gacttcttct acggagtctt caaagtcacg tacgagcacg tcgcg 45 <210> 34 <211> 38 <212> DNA <213> Artificial Sequence <220> <223> Mut G4-644 (Fwd) <400> 34 cggtaataaa agagctagta gccatagtta cggcgccg 38 <210> 35 <211> 38 <212> DNA <213> Artificial Sequence <220> <223> Mut G4-644 (Rev) <400> 35 cggcgccgta actatggcta ctagctcttt tattaccg 38 <210> 36 <211> 38 <212> DNA <213> Artificial Sequence <220> <223> Mut G4-3467 (Fwd) <400> 36 catggaagaa gtgttgcaag agccttaaat aaggctac 38 <210> 37 <211> 38 <212> DNA <213> Artificial Sequence <220> <223> Mut G4-3467 (Rev) <400> 37 gtagccttat ttaaggctct tgcaacactt cttccatg 38 <210> 38 <211> 38 <212> DNA <213> Artificial Sequence <220> <223> T7-G4-353 (Fwd) <400> 38 agtaatacga ctcactatag ggatggagag ccttgtcc 38 <210> 39 <211> 41 <212> DNA <213> Artificial Sequence <220> <223> T7-G4-644 (Fwd) <400> 39 agtaatacga ctcactatag ggatggttga gctggtagca g 41 <210> 40 <211> 44 <212> DNA <213> Artificial Sequence <220> <223> T7-G4-3467 (Fwd) <400> 40 agtaatacga ctcactatag ggatggaact tacaccagtt gttc 44 <210> 41 <211> 22 <212> DNA <213> Artificial Sequence <220> <223> T7-EYFP (Rev) <400> 41 ttacttgtac agctcgtcca tg 22 <210> 42 <211> 25 <212> RNA <213> Artificial Sequence <220> <223> Mut-G-353 <400> 42 gacuuugaag acuccguaga agaag 25 <210> 43 <211> 20 <212> RNA <213> Artificial Sequence <220> <223> Mut-G-644 <400> 43 gguaauaaaa gagcuaguag 20 <210> 44 <211> 17 <212> RNA <213> Artificial Sequence <220> <223> Mut-G-3467 <400> 44 ggaagaagug uugcaag 17
Claims (14)
A pharmaceutical composition for preventing or treating coronavirus infection, comprising a compound binding to the G4 structure of coronavirus or a pharmaceutically acceptable salt thereof as an active ingredient.
상기 화합물은 하기 화학식 1 내지 화학식 7로 표시되는 화합물로 이루어진 군으로부터 선택된 하나 이상인 것을 특징으로 하는, 코로나바이러스 감염증 예방 또는 치료용 약학적 조성물.
[화학식 1]
[화학식 2]
[화학식 3]
[화학식 4]
[화학식 5]
[화학식 6]
[화학식 7]
According to claim 1,
The compound is a pharmaceutical composition for preventing or treating coronavirus infection, characterized in that at least one selected from the group consisting of compounds represented by the following Chemical Formulas 1 to 7.
[Formula 1]
[Formula 2]
[Formula 3]
[Formula 4]
[Formula 5]
[Formula 6]
[Formula 7]
상기 코로나바이러스는 인간 코로나바이러스 229E(HCoV-229E), 인간 코로나바이러스 OC43(HCoV-OC43), 중증급성호흡기증후군 코로나바이러스(SARS-CoV), 인간 코로나바이러스 NL63(HCoV-NL63, 뉴헤븐 코로나바이러스), 인간 코로나바이러스 HKU1, 중동호흡기증후군 코로나바이러스(MERS-CoV) 및 중증급성호흡기증후군 코로나바이러스 2(SARS-Cov-2)로 이루어지는 군에서 하나 이상 선택된 것을 특징으로 하는, 코로나바이러스 감염증 예방 또는 치료용 약학적 조성물.
According to claim 1,
The coronavirus is human coronavirus 229E (HCoV-229E), human coronavirus OC43 (HCoV-OC43), severe acute respiratory syndrome coronavirus (SARS-CoV), human coronavirus NL63 (HCoV-NL63, New Haven coronavirus) , Human coronavirus HKU1, Middle East Respiratory Syndrome Coronavirus (MERS-CoV) and Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-Cov-2), characterized in that at least one selected from the group consisting of, for preventing or treating coronavirus infection pharmaceutical composition.
상기 화합물은 코로나바이러스의 G4 구조를 안정화 시키는 것을 특징으로 하는, 코로나바이러스 감염증 예방 또는 치료용 약학적 조성물.
According to claim 1,
The compound is a pharmaceutical composition for preventing or treating coronavirus infection, characterized in that it stabilizes the G4 structure of the coronavirus.
상기 화합물은 코로나바이러스 단백질 Nsp1(non-structural protein 1), Nsp3(non-structural protein 3) 및 뉴클레오캡시드로 이루어진 군으로부터 선택된 하나 이상의 단백질의 발현을 억제하는 것을 특징으로 하는, 코로나바이러스 감염증 예방 또는 치료용 약학적 조성물.
According to claim 1,
The compound is characterized in that it inhibits the expression of one or more proteins selected from the group consisting of the coronavirus protein Nsp1 (non-structural protein 1), Nsp3 (non-structural protein 3) and nucleocapsid. Prevention or A therapeutic pharmaceutical composition.
상기 화합물은 코로나바이러스 비리온 생산을 억제하는 것을 특징으로 하는, 코로나바이러스 감염증 예방 또는 치료용 약학적 조성물.
According to claim 1,
The compound is characterized in that it inhibits the production of coronavirus virions, a pharmaceutical composition for preventing or treating coronavirus infection.
A food composition for preventing or improving coronavirus infection, comprising as an active ingredient a compound binding to the G4 structure of coronavirus or a pharmaceutically acceptable salt thereof.
상기 화합물은 하기 화학식 1 내지 화학식 7로 표시되는 화합물로 이루어진 군으로부터 선택된 하나 이상인 것을 특징으로 하는, 코로나바이러스 감염증 예방 또는 개선용 식품 조성물.
[화학식 1]
[화학식 2]
[화학식 3]
[화학식 4]
[화학식 5]
[화학식 6]
[화학식 7]
8. The method of claim 7,
The compound is a food composition for preventing or improving coronavirus infection, characterized in that at least one selected from the group consisting of compounds represented by the following Chemical Formulas 1 to 7.
[Formula 1]
[Formula 2]
[Formula 3]
[Formula 4]
[Formula 5]
[Formula 6]
[Formula 7]
A quasi-drug composition for preventing or inhibiting coronavirus infection, comprising as an active ingredient a compound that binds to the G4 structure of coronavirus.
상기 화합물은 하기 화학식 1 내지 화학식 7로 표시되는 화합물로 이루어진 군으로부터 선택된 하나 이상인 것을 특징으로 하는, 코로나바이러스 감염증 예방 또는 억제용 의약외품 조성물.
[화학식 1]
[화학식 2]
[화학식 3]
[화학식 4]
[화학식 5]
[화학식 6]
[화학식 7]
10. The method of claim 9,
The compound is a quasi-drug composition for preventing or inhibiting coronavirus infection, characterized in that at least one selected from the group consisting of compounds represented by the following Chemical Formulas 1 to 7.
[Formula 1]
[Formula 2]
[Formula 3]
[Formula 4]
[Formula 5]
[Formula 6]
[Formula 7]
상기 의약외품은 소독청결제, 샤워폼, 가그린, 물티슈, 세제비누, 핸드워시 및 연고제로 이루어지는 군에서 선택된 하나 이상인 것을 특징으로 하는, 코로나바이러스 감염증 예방 또는 억제용 의약외품 조성물.
10. The method of claim 9,
The quasi-drug composition is a quasi-drug composition for preventing or inhibiting coronavirus infection, characterized in that at least one selected from the group consisting of disinfectant cleaner, shower foam, gargrin, wet tissue, detergent soap, hand wash and ointment.
A composition for antiviral against coronavirus, comprising as an active ingredient a compound that binds to the G4 structure of coronavirus.
상기 화합물은 하기 화학식 1 내지 화학식 7로 표시되는 화합물로 이루어진 군으로부터 선택된 하나 이상인 것을 특징으로 하는, 코로나바이러스에 대한 항바이러스용 조성물.
[화학식 1]
[화학식 2]
[화학식 3]
[화학식 4]
[화학식 5]
[화학식 6]
[화학식 7]
13. The method of claim 12,
The compound is an antiviral composition for coronavirus, characterized in that at least one selected from the group consisting of compounds represented by the following Chemical Formulas 1 to 7.
[Formula 1]
[Formula 2]
[Formula 3]
[Formula 4]
[Formula 5]
[Formula 6]
[Formula 7]
상기 코로나바이러스는 인간 코로나바이러스 229E(HCoV-229E), 인간 코로나바이러스 OC43(HCoV-OC43), 중증급성호흡기증후군 코로나바이러스(SARS-CoV), 인간 코로나바이러스 NL63(HCoV-NL63, 뉴헤븐 코로나바이러스), 인간 코로나바이러스 HKU1, 중동호흡기증후군 코로나바이러스(MERS-CoV) 및 중증급성호흡기증후군 코로나바이러스 2(SARS-Cov-2)로 이루어지는 군에서 하나 이상 선택된 것을 특징으로 하는, 코로나바이러스에 대한 항바이러스용 조성물.13. The method of claim 12,
The coronavirus is human coronavirus 229E (HCoV-229E), human coronavirus OC43 (HCoV-OC43), severe acute respiratory syndrome coronavirus (SARS-CoV), human coronavirus NL63 (HCoV-NL63, New Haven coronavirus) , Human coronavirus HKU1, Middle East Respiratory Syndrome Coronavirus (MERS-CoV) and Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-Cov-2), characterized in that at least one selected from the group consisting of, antiviral for coronavirus composition.
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KR1020240021367A KR20240023588A (en) | 2020-09-18 | 2024-02-14 | Phamaceutical composition for preventing or treating Coronavirus infectious disease comprising Coronavirus G-quadruplex ligands as an active ingredient |
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